View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20633_high_224 (Length: 202)
Name: NF20633_high_224
Description: NF20633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20633_high_224 |
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Alignment Details
Target: chr4 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 18 - 189
Target Start/End: Complemental strand, 29287080 - 29286909
Alignment:
| Q |
18 |
aagtatagctttaaaaagatgaaagggacttgactaaaaagagaaaatggaagggacttatatattgaagttttttgttattcattgtgaaatatgaaac |
117 |
Q |
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| T |
29287080 |
aagtatagctttaaaaagatgaaagggacttgactaaaaagagaaaatggaagggacttatatattgaagttttt-gttattcattgtgaaatatgaaac |
29286982 |
T |
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| Q |
118 |
tacattgtaaatggccttgtgcttggacattactctgtgacatctttagtcaacattgatttt-cttggacat |
189 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
29286981 |
tacattgtaaatggccttgtgcttggacattactctgtgacatctttagtcaacattgattttgcttggacat |
29286909 |
T |
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