View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20633_high_68 (Length: 401)

Name: NF20633_high_68
Description: NF20633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20633_high_68
NF20633_high_68
[»] chr3 (52 HSPs)
chr3 (162-360)||(24569325-24569532)
chr3 (16-160)||(24568910-24569054)
chr3 (71-245)||(38389452-38389625)
chr3 (75-232)||(11610935-11611088)
chr3 (72-226)||(23638050-23638201)
chr3 (71-232)||(3863350-3863507)
chr3 (113-232)||(28992815-28992935)
chr3 (71-227)||(13495319-13495472)
chr3 (71-227)||(32553392-32553544)
chr3 (161-235)||(9710961-9711035)
chr3 (71-232)||(51618070-51618225)
chr3 (72-245)||(54527707-54527879)
chr3 (71-225)||(16875025-16875175)
chr3 (113-200)||(23320122-23320206)
chr3 (70-232)||(46492342-46492501)
chr3 (71-254)||(50204399-50204581)
chr3 (72-235)||(8497421-8497584)
chr3 (131-212)||(15862961-15863043)
chr3 (70-232)||(20938077-20938236)
chr3 (131-215)||(37055426-37055507)
chr3 (72-245)||(42180057-42180229)
chr3 (71-235)||(36426409-36426572)
chr3 (167-232)||(51339276-51339341)
chr3 (72-205)||(7940838-7940969)
chr3 (72-232)||(35094976-35095131)
chr3 (128-225)||(54621275-54621368)
chr3 (72-232)||(37332135-37332290)
chr3 (165-216)||(46845531-46845582)
chr3 (128-232)||(50364211-50364311)
chr3 (164-232)||(2379162-2379227)
chr3 (162-235)||(27549555-27549631)
chr3 (70-194)||(35414808-35414929)
chr3 (129-208)||(38785924-38786000)
chr3 (72-227)||(40497073-40497224)
chr3 (163-235)||(51567906-51567979)
chr3 (298-342)||(20871254-20871297)
chr3 (161-216)||(47386958-47387014)
chr3 (163-211)||(53537080-53537128)
chr3 (71-154)||(40330295-40330378)
chr3 (71-157)||(23523038-23523124)
chr3 (166-245)||(24086989-24087070)
chr3 (71-206)||(29686367-29686498)
chr3 (167-221)||(30214103-30214156)
chr3 (166-232)||(37444167-37444232)
chr3 (161-215)||(49396388-49396442)
chr3 (129-208)||(23803104-23803180)
chr3 (119-160)||(29932400-29932441)
chr3 (119-160)||(29981554-29981595)
chr3 (187-232)||(43750072-43750117)
chr3 (72-206)||(1569191-1569322)
chr3 (133-225)||(26486439-26486525)
chr3 (70-158)||(48346364-48346450)
[»] chr4 (52 HSPs)
chr4 (72-256)||(16667385-16667568)
chr4 (70-235)||(47326891-47327053)
chr4 (70-235)||(47341687-47341849)
chr4 (71-256)||(54495637-54495821)
chr4 (70-245)||(23545481-23545655)
chr4 (71-245)||(8736811-8736983)
chr4 (71-225)||(29190816-29190966)
chr4 (71-216)||(2096907-2097049)
chr4 (71-235)||(27362408-27362569)
chr4 (133-232)||(6875521-6875617)
chr4 (72-198)||(51070399-51070520)
chr4 (71-227)||(25843316-25843472)
chr4 (71-245)||(17409829-17410002)
chr4 (71-245)||(19450900-19451073)
chr4 (71-245)||(33632203-33632375)
chr4 (133-232)||(7349709-7349804)
chr4 (71-235)||(27019277-27019438)
chr4 (165-235)||(39539481-39539551)
chr4 (161-205)||(27298938-27298982)
chr4 (73-161)||(42479894-42479982)
chr4 (70-215)||(53961360-53961501)
chr4 (71-245)||(19468199-19468372)
chr4 (71-232)||(49181092-49181250)
chr4 (71-207)||(9326865-9327002)
chr4 (71-207)||(9373587-9373724)
chr4 (71-207)||(9381899-9382036)
chr4 (161-227)||(49332358-49332424)
chr4 (70-189)||(1378081-1378196)
chr4 (72-227)||(52391323-52391475)
chr4 (163-234)||(24297390-24297461)
chr4 (161-216)||(42480009-42480064)
chr4 (166-208)||(16069299-16069341)
chr4 (133-232)||(36000002-36000097)
chr4 (167-221)||(41415649-41415703)
chr4 (71-235)||(51691359-51691519)
chr4 (163-245)||(3085357-3085441)
chr4 (161-238)||(34941292-34941369)
chr4 (71-200)||(53376408-53376535)
chr4 (129-235)||(13009813-13009916)
chr4 (74-227)||(24684861-24685012)
chr4 (143-200)||(35645073-35645127)
chr4 (167-225)||(10813587-10813645)
chr4 (120-232)||(27756582-27756690)
chr4 (143-215)||(38222323-38222392)
chr4 (167-216)||(23438192-23438241)
chr4 (119-160)||(32459419-32459460)
chr4 (162-215)||(37784948-37785001)
chr4 (119-160)||(43759515-43759556)
chr4 (168-225)||(49228384-49228441)
chr4 (136-182)||(33559271-33559314)
chr4 (167-215)||(48910894-48910942)
chr4 (72-194)||(55813922-55814041)
[»] chr7 (42 HSPs)
chr7 (114-232)||(19868134-19868249)
chr7 (72-205)||(7899487-7899617)
chr7 (71-232)||(19889361-19889518)
chr7 (71-232)||(39757110-39757267)
chr7 (71-200)||(8420833-8420959)
chr7 (71-227)||(23982755-23982908)
chr7 (71-232)||(9331982-9332139)
chr7 (128-238)||(12085988-12086094)
chr7 (70-232)||(25709398-25709557)
chr7 (71-232)||(32117835-32117992)
chr7 (128-232)||(47120251-47120351)
chr7 (62-232)||(5909273-5909439)
chr7 (161-232)||(12650841-12650912)
chr7 (71-263)||(3561878-3562068)
chr7 (162-232)||(24699156-24699225)
chr7 (136-241)||(31066800-31066903)
chr7 (133-208)||(2276719-2276791)
chr7 (70-215)||(384430-384570)
chr7 (143-232)||(36548532-36548617)
chr7 (73-208)||(18102232-18102364)
chr7 (87-215)||(12624675-12624798)
chr7 (167-254)||(24250310-24250399)
chr7 (166-227)||(44806959-44807020)
chr7 (70-245)||(45501464-45501638)
chr7 (161-236)||(8091399-8091474)
chr7 (143-200)||(11680090-11680144)
chr7 (74-227)||(24462958-24463107)
chr7 (71-232)||(33343009-33343166)
chr7 (73-216)||(28323172-28323311)
chr7 (72-160)||(28061324-28061412)
chr7 (184-245)||(29398224-29398287)
chr7 (71-232)||(47457461-47457619)
chr7 (163-233)||(29692629-29692699)
chr7 (163-225)||(38759975-38760037)
chr7 (166-232)||(39869143-39869209)
chr7 (72-203)||(3530115-3530242)
chr7 (119-160)||(38798118-38798159)
chr7 (119-160)||(38798256-38798297)
chr7 (119-160)||(42593442-42593483)
chr7 (119-160)||(45645456-45645497)
chr7 (166-213)||(27300466-27300514)
chr7 (145-215)||(38554275-38554342)
[»] chr6 (27 HSPs)
chr6 (72-245)||(6016861-6017033)
chr6 (71-245)||(18332688-18332861)
chr6 (70-245)||(10887034-10887208)
chr6 (72-227)||(31069583-31069734)
chr6 (71-232)||(2830681-2830838)
chr6 (123-232)||(22974625-22974730)
chr6 (123-232)||(23813671-23813776)
chr6 (70-227)||(30591162-30591316)
chr6 (123-232)||(5362945-5363050)
chr6 (71-232)||(12454086-12454243)
chr6 (71-245)||(34692359-34692532)
chr6 (71-227)||(31169763-31169916)
chr6 (163-245)||(30623331-30623415)
chr6 (72-160)||(31503831-31503919)
chr6 (71-232)||(29863302-29863460)
chr6 (143-215)||(1017850-1017919)
chr6 (72-232)||(8977467-8977624)
chr6 (166-232)||(26602522-26602588)
chr6 (167-227)||(3850577-3850637)
chr6 (144-212)||(29730318-29730383)
chr6 (163-235)||(4371856-4371929)
chr6 (119-160)||(34733749-34733790)
chr6 (188-232)||(2086949-2086993)
chr6 (79-212)||(17154662-17154793)
chr6 (196-232)||(17596333-17596369)
chr6 (161-232)||(28757573-28757644)
chr6 (167-238)||(32615552-32615626)
[»] scaffold0111 (1 HSPs)
scaffold0111 (71-245)||(37114-37287)
[»] chr1 (46 HSPs)
chr1 (72-205)||(9516628-9516758)
chr1 (71-245)||(30171884-30172057)
chr1 (71-245)||(30187425-30187598)
chr1 (71-267)||(34801951-34802145)
chr1 (72-205)||(35438762-35438892)
chr1 (71-232)||(313770-313927)
chr1 (70-245)||(23591703-23591877)
chr1 (71-232)||(39150327-39150484)
chr1 (71-232)||(17919474-17919631)
chr1 (72-199)||(13241810-13241934)
chr1 (71-232)||(36490799-36490957)
chr1 (71-206)||(30288864-30288995)
chr1 (70-238)||(51920430-51920595)
chr1 (71-232)||(44918045-44918202)
chr1 (71-210)||(6569985-6570120)
chr1 (71-227)||(30362995-30363148)
chr1 (72-161)||(43909281-43909368)
chr1 (71-245)||(6180191-6180364)
chr1 (143-232)||(8062225-8062310)
chr1 (162-225)||(19277815-19277878)
chr1 (71-235)||(22167352-22167513)
chr1 (71-235)||(38812757-38812918)
chr1 (165-226)||(21854208-21854269)
chr1 (165-221)||(31101024-31101079)
chr1 (70-217)||(2222235-2222377)
chr1 (71-245)||(35512730-35512903)
chr1 (174-254)||(51382368-51382450)
chr1 (75-161)||(20357358-20357444)
chr1 (75-161)||(20562511-20562597)
chr1 (163-245)||(7824947-7825031)
chr1 (166-215)||(39930892-39930941)
chr1 (144-216)||(49195647-49195719)
chr1 (71-162)||(4249293-4249384)
chr1 (71-162)||(4249617-4249708)
chr1 (71-162)||(4249941-4250032)
chr1 (167-205)||(281030-281068)
chr1 (143-225)||(23378574-23378655)
chr1 (163-212)||(11744917-11744966)
chr1 (171-245)||(22331628-22331704)
chr1 (163-245)||(23808440-23808523)
chr1 (119-160)||(42589261-42589302)
chr1 (119-160)||(44013014-44013055)
chr1 (163-215)||(30109095-30109147)
chr1 (131-232)||(32716223-32716320)
chr1 (133-227)||(39627633-39627724)
chr1 (117-181)||(50467431-50467493)
[»] chr2 (32 HSPs)
chr2 (71-232)||(27665044-27665201)
chr2 (71-232)||(16126559-16126716)
chr2 (71-224)||(36731208-36731358)
chr2 (73-232)||(19228446-19228601)
chr2 (73-232)||(15411624-15411780)
chr2 (71-232)||(12016687-12016844)
chr2 (70-232)||(20566016-20566175)
chr2 (71-215)||(9747354-9747495)
chr2 (73-232)||(14377445-14377600)
chr2 (70-225)||(45062225-45062377)
chr2 (73-216)||(2060044-2060184)
chr2 (163-245)||(7720120-7720204)
chr2 (71-194)||(9450315-9450435)
chr2 (123-232)||(22705475-22705580)
chr2 (72-232)||(12919351-12919509)
chr2 (70-232)||(16919153-16919311)
chr2 (167-232)||(39904140-39904205)
chr2 (143-225)||(2051641-2051720)
chr2 (70-232)||(23932585-23932744)
chr2 (72-227)||(34213950-34214104)
chr2 (165-216)||(43388857-43388908)
chr2 (71-245)||(43806365-43806538)
chr2 (167-232)||(10690803-10690868)
chr2 (71-160)||(29157829-29157918)
chr2 (166-232)||(22162169-22162234)
chr2 (119-160)||(3286584-3286625)
chr2 (129-216)||(11660977-11661060)
chr2 (136-200)||(25068539-25068603)
chr2 (167-232)||(26229946-26230010)
chr2 (119-160)||(43941902-43941943)
chr2 (175-227)||(4579889-4579941)
chr2 (123-181)||(35729188-35729243)
[»] chr8 (50 HSPs)
chr8 (113-227)||(34249702-34249814)
chr8 (73-216)||(20514669-20514809)
chr8 (71-232)||(10129124-10129281)
chr8 (71-245)||(31812118-31812291)
chr8 (128-226)||(9743888-9743982)
chr8 (71-232)||(7140459-7140616)
chr8 (73-205)||(7393247-7393375)
chr8 (71-235)||(26834578-26834739)
chr8 (71-258)||(26682060-26682246)
chr8 (72-225)||(13327942-13328091)
chr8 (167-227)||(8140593-8140653)
chr8 (71-245)||(12131988-12132161)
chr8 (161-236)||(37264517-37264592)
chr8 (71-215)||(6818054-6818195)
chr8 (71-232)||(8284568-8284727)
chr8 (72-223)||(34741666-34741813)
chr8 (71-255)||(38843699-38843882)
chr8 (71-233)||(12189588-12189747)
chr8 (71-233)||(12434016-12434175)
chr8 (71-212)||(18567416-18567553)
chr8 (73-215)||(38047940-38048078)
chr8 (71-232)||(39701803-39701960)
chr8 (71-207)||(29642648-29642781)
chr8 (123-199)||(31133889-31133961)
chr8 (163-254)||(36967159-36967252)
chr8 (163-245)||(45005975-45006059)
chr8 (71-212)||(9801709-9801846)
chr8 (71-232)||(35678275-35678432)
chr8 (162-200)||(26195495-26195533)
chr8 (166-235)||(9580201-9580270)
chr8 (171-232)||(38527841-38527902)
chr8 (157-225)||(9824986-9825054)
chr8 (143-225)||(10974626-10974705)
chr8 (136-225)||(40210886-40210971)
chr8 (166-217)||(6850669-6850720)
chr8 (71-232)||(14816126-14816283)
chr8 (71-232)||(14829457-14829614)
chr8 (163-238)||(16445824-16445899)
chr8 (166-225)||(44091346-44091404)
chr8 (161-227)||(5573313-5573379)
chr8 (161-227)||(12346031-12346097)
chr8 (119-160)||(10543677-10543718)
chr8 (71-182)||(14961663-14961771)
chr8 (71-116)||(15198900-15198945)
chr8 (175-232)||(19343937-19343994)
chr8 (166-238)||(4080485-4080557)
chr8 (166-238)||(4084634-4084706)
chr8 (166-238)||(4102941-4103013)
chr8 (163-211)||(13496820-13496868)
chr8 (163-235)||(34869611-34869683)
[»] scaffold0061 (1 HSPs)
scaffold0061 (71-254)||(52779-52960)
[»] scaffold0017 (1 HSPs)
scaffold0017 (71-254)||(145674-145855)
[»] chr5 (38 HSPs)
chr5 (70-232)||(12641992-12642150)
chr5 (71-232)||(2795544-2795701)
chr5 (70-224)||(32019983-32020134)
chr5 (71-225)||(4047440-4047590)
chr5 (113-238)||(10665007-10665128)
chr5 (70-215)||(15240949-15241091)
chr5 (123-238)||(9184222-9184333)
chr5 (71-225)||(6863584-6863734)
chr5 (123-232)||(30328379-30328484)
chr5 (72-227)||(34578037-34578188)
chr5 (71-238)||(13515926-13516089)
chr5 (70-254)||(31365949-31366133)
chr5 (72-232)||(33072697-33072856)
chr5 (70-215)||(35469590-35469733)
chr5 (71-245)||(3398225-3398398)
chr5 (166-215)||(5958215-5958264)
chr5 (167-232)||(11375980-11376045)
chr5 (72-157)||(14466495-14466580)
chr5 (163-245)||(18841794-18841878)
chr5 (165-226)||(24329726-24329787)
chr5 (134-232)||(28629899-28629993)
chr5 (143-235)||(40309499-40309590)
chr5 (73-215)||(31567493-31567632)
chr5 (71-232)||(11636752-11636909)
chr5 (133-194)||(11692690-11692749)
chr5 (72-211)||(41350244-41350379)
chr5 (166-215)||(16174713-16174762)
chr5 (163-245)||(26376658-26376742)
chr5 (71-179)||(23995416-23995523)
chr5 (167-225)||(15190900-15190958)
chr5 (119-160)||(12332426-12332467)
chr5 (119-160)||(13761759-13761800)
chr5 (119-160)||(31613197-31613238)
chr5 (119-160)||(31705018-31705059)
chr5 (70-158)||(39990038-39990124)
chr5 (119-160)||(40454150-40454191)
chr5 (163-235)||(3737965-3738036)
chr5 (163-236)||(26265133-26265208)
[»] scaffold0009 (2 HSPs)
scaffold0009 (72-222)||(191316-191461)
scaffold0009 (72-212)||(43503-43641)
[»] scaffold0011 (1 HSPs)
scaffold0011 (71-225)||(13113-13263)
[»] scaffold0036 (1 HSPs)
scaffold0036 (70-235)||(94017-94179)
[»] scaffold0149 (1 HSPs)
scaffold0149 (72-211)||(22503-22641)
[»] scaffold0305 (1 HSPs)
scaffold0305 (70-212)||(17995-18134)
[»] scaffold0018 (1 HSPs)
scaffold0018 (71-211)||(182085-182220)
[»] scaffold0618 (1 HSPs)
scaffold0618 (166-225)||(8506-8564)
[»] scaffold0155 (1 HSPs)
scaffold0155 (129-232)||(3471-3571)
[»] scaffold0074 (1 HSPs)
scaffold0074 (166-215)||(45989-46038)


Alignment Details
Target: chr3 (Bit Score: 143; Significance: 5e-75; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 162 - 360
Target Start/End: Original strand, 24569325 - 24569532
Alignment:
Q  162 taactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttagagaaagcctaatttt 259  Q
    ||||||||||||||||||||||||||||||||| |||| ||| || || |||||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  24569325 taactttttaataaataattgatgtttttcaataaaaagttattatttgtagttgtcttaacatgtccaatattgcacatgttagagaaagcctaatttt 24569424  T
Q  260 atta-------gcaatcactagtcttgacggcttccttcaaccttaaggtaagaagaattcttaacttgagtttggattacaaagctaaatattgcacaa 352  Q
    ||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24569425 attatcctatagcaatcactagtcttgacggcttccttcaaccttaaggtaagaagaattcttaacttaagtttggattacaaagctaaatattgcacaa 24569524  T
Q  353 aataatac 360  Q
    ||||||||    
T  24569525 aataatac 24569532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 16 - 160
Target Start/End: Original strand, 24568910 - 24569054
Alignment:
Q  16 aatatataactaaacaaataactaatgttctaaaactactaacataattttatcagtttttctatcatgtgcaaattttgacatgttaaaattttttaaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | || ||||||| ||||||||||||||||||||    
T  24568910 aatatataactaaacaaataactaatgttctaaaactactaacataattttatgagtttttctatcgtatgtaaattttcacatgttaaaattttttaaa 24569009  T
Q  116 tgataagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||    
T  24569010 tgataaatttatcttggaacttgtatgttttatattaaatatata 24569054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 71 - 245
Target Start/End: Complemental strand, 38389625 - 38389452
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || || ||| |||  |||||||||||||  ||| ||||||||||| ||    ||||||    
T  38389625 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatatgtag---cttttt 38389529  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    ||||||||| |  ||||||||||| |||||||||||||||||| | ||||||||||| |||||||  ||||||||||    
T  38389528 aataaataagttttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttaga 38389452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 75 - 232
Target Start/End: Complemental strand, 11611088 - 11610935
Alignment:
Q  75 ttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttttaata 174  Q
    |||||||||||||||||||  ||||| ||| |  ||| || |  ||| |||  |||||||||||||| ||||||||||||||| |||     ||||||||    
T  11611088 ttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaa----cttttaata 11610993  T
Q  175 aataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||||| || ||||||||||||| |||||||||||||||| |||||||||| ||||    
T  11610992 aataattgttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaat 11610935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 23638050 - 23638201
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||| ||||||| ||||||||  ||||||||| |  ||| ||||| ||||||  ||||| ||||||||| |||||||||||||||| ||   |||||||    
T  23638050 tttttatatcatgagcaaatttgcacatgttaagaaatttaaaatggtaagttagtcttgaaacttgtgtattttatattaaatatacaa---cttttta 23638146  T
Q  172 ataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatg 226  Q
     ||||||||||||||||||||||  ||| |||||||||| ||||  |||||||||    
T  23638147 ttaaataattgatgtttttcaatagaaagttactactttaagttaacttaacatg 23638201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 3863507 - 3863350
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || |  ||| |||| |||||||||||||| ||||||||||||||| |    |  ||||    
T  3863507 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttagcttggaacttgtgttttttatattaaatatgt----agctttt 3863412  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||| |||||||| || ||||||||||||| ||||||| |||||||  |||||||||| ||||    
T  3863411 aatcaataattgctgattttcaatgaaaagttactacctttagttaccttaacatgtgcaat 3863350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 113 - 232
Target Start/End: Original strand, 28992815 - 28992935
Alignment:
Q  113 aaatgataagtttatcttggaacttgtgtgttttatattaaatatataa-taactttttaataaataattgatgtttttcaatgaaaaattactactttt 211  Q
    ||||||||||||||||||  || |||||| ||||||||||||| ||||| |   |||||| ||||||||| || ||||| |||||||| |||||||||||    
T  28992815 aaatgataagtttatcttaaaatttgtgtattttatattaaatgtataactttttttttattaaataattaatattttttaatgaaaagttactactttt 28992914  T
Q  212 agttgtcttaacatgtccaat 232  Q
    | |||| ||||||||| ||||    
T  28992915 aattgttttaacatgtgcaat 28992935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 227
Target Start/End: Complemental strand, 13495472 - 13495319
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||| ||||||  ||||| ||| |  ||| || |  ||| |||  |||||||||||||  ||||||||||||||| ||     |||||    
T  13495472 gtttttctatcatgtgaaaatttgcacatgataagaagtttaaagtagtaattttgacttggaacttgtgcattttatattaaatatgtagg---ttttt 13495376  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    |||||||||||| || |||||||| ||||||||||||||||||||  ||||||||||    
T  13495375 aataaataattgttgattttcaataaaaaattactacttttagttaccttaacatgt 13495319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 71 - 227
Target Start/End: Complemental strand, 32553544 - 32553392
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||| ||||||  ||||||||| |  ||| || | |||| ||||  ||| ||||||||| ||||||||||||||| |||||    |||    
T  32553544 gtttttctatcatgtgtaaatttacacatgttaagaagtttaaattaataactttaatttgaaacttgtgttttttatattaaatatgtaata----ttt 32553449  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    ||  |||||||  || ||||||||||||| |||||||||||| ||  ||||||||||    
T  32553448 aactaataattattgattttcaatgaaaagttactacttttaattaccttaacatgt 32553392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 235
Target Start/End: Complemental strand, 9711035 - 9710961
Alignment:
Q  161 ataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt 235  Q
    |||| |||||||| |||||||| ||||||||||| |||| |||||| |||||||||| ||||||||| |||||||    
T  9711035 ataaatttttaattaataattgttgtttttcaataaaaacttactagttttagttgttttaacatgtgcaatgtt 9710961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 51618225 - 51618070
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| ||||  ||| |||   |||||||||||   |||| |||||||||||||      ||||    
T  51618225 gtttttctatcatgtgcaaatttgcacatgttaagaagtttcaaattgtaactttgcattggaacttgtacattttgtattaaatatata------tttt 51618132  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||||||||| ||||||||| | |||| || || ||||||||||| ||||||||| ||||    
T  51618131 aataaataattgttgtttttcagtaaaaacttgctgcttttagttgttttaacatgtgcaat 51618070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 245
Target Start/End: Original strand, 54527707 - 54527879
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||||||| ||||||||||||  ||||||||| |  ||| ||||   || ||| | |||||||||||   ||| |||||||||||| ||   ||||| |    
T  54527707 tttttctattatgtgcaaatttgcacatgttaagaaatttaaaatataaattttgtattggaacttgtacatttaatattaaatataaaa---cttttga 54527803  T
Q  172 ataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    ||||||||||| |||||| |||  |||| |||||||| |||||||| ||||||||| |||||||  ||||||||||    
T  54527804 ataaataattgttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 54527879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 225
Target Start/End: Original strand, 16875025 - 16875175
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    ||||||||||| |||||||||||  ||||||||| |  ||| || |  ||| |||| |||| ||||||||| ||||||||||||||| |    |  ||||    
T  16875025 gtttttctatcgtgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatatgt----agctttt 16875120  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacat 225  Q
    ||| || ||||| || |||||||| ||||||||||||||||||||  ||||||||    
T  16875121 aatcaacaattgttggttttcaataaaaaattactacttttagttaccttaacat 16875175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 200
Target Start/End: Complemental strand, 23320206 - 23320122
Alignment:
Q  113 aaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaa 200  Q
    ||||| ||| ||| ||||| |||| |||| ||||||||||||||||||    |||||||||||||||||||||||||||||| |||||    
T  23320206 aaatggtaaatttgtcttgaaactcgtgtattttatattaaatatatat---ctttttaataaataattgatgtttttcaataaaaaa 23320122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 70 - 232
Target Start/End: Original strand, 46492342 - 46492501
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||||||||||||||||||||||| ||| ||||| |  ||| || |  ||| |||   ||| |||||||   |||| ||||||||||||||   ||  |    
T  46492342 agtttttctatcatgtgcaaattttcacacgttaagaaatttaaagtagtaactttgcattgaaacttgtacattttgtattaaatatataa---ctcgt 46492438  T
Q  170 taataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||||||||||| ||||||||||| |||| |||| |||||||||||  ||||||||| ||||    
T  46492439 taataaataattgttgtttttcaataaaaacttaccacttttagttgctttaacatgtgcaat 46492501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 254
Target Start/End: Complemental strand, 50204581 - 50204399
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| ||||   || ||| | ||||||| |||   ||| |||||||||||| ||   |||||     
T  50204581 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacctgtacatttaatattaaatataaaa---cttttg 50204485  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttagagaaagccta 254  Q
    |||| ||||||| | |||| |||  ||||||||||||| |||||||| ||||||||| |||||||  |||||||||| ||| ||||    
T  50204484 aatatataattgttattttccaagaaaaaattactactattagttgttttaacatgtgcaatgttgcacatgttagacaaacccta 50204399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 72 - 235
Target Start/End: Original strand, 8497421 - 8497584
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    |||||||||||| || |||||| | ||||||||||  ||| ||||  ||| |||   ||| ||||||| ||||||||||| ||||   ||||| ||||||    
T  8497421 tttttctatcatatgtaaatttggccatgttaaaaactttaaaattgtaattttgcattgaaacttgtatgttttatatttaata---aataagttttta 8497517  T
Q  172 ataaataattgatgtttttcaatgaaaaa---ttactacttttagttgtcttaacatgtccaatgtt 235  Q
    |||| ||||||   ||||||||| |||||   ||| ||||||||||||| ||||||||| |||||||    
T  8497518 ataattaattgtaatttttcaataaaaaagccttattacttttagttgttttaacatgtgcaatgtt 8497584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 15862961 - 15863043
Alignment:
Q  131 ggaacttgtgtgttttatattaaatatata-ataactttttaataaataattgatgtttttcaatgaaaaattactactttta 212  Q
    ||||||||||  |||||||||| ||||||| ||||||||| |||||||||||| | |||||||||| ||| || |||||||||    
T  15862961 ggaacttgtgcattttatattatatatatatataacttttaaataaataattgttctttttcaatgtaaagttgctactttta 15863043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 70 - 232
Target Start/End: Complemental strand, 20938236 - 20938077
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgtttt-atattaaatatataataacttt 168  Q
    ||||||||||||||||||||||||  ||||| ||| |  ||| || |  ||| |||  |||||||||||||| |||| ||||||||||| ||||    ||    
T  20938236 agtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtttttttatattaaatatgtaat----tt 20938141  T
Q  169 ttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||| |||||||| |  |||||||| |||| ||| |||||||||||  |||||||||| ||||    
T  20938140 ttaatcaataattgttagttttcaataaaaagttattacttttagttaccttaacatgtgcaat 20938077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 37055426 - 37055507
Alignment:
Q  131 ggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagtt 215  Q
    ||||||||||| ||||||||||| |||| ||   |||||||||||||||||| | |||||||||| ||| |||||| ||||||||    
T  37055426 ggaacttgtgttttttatattaactataaaa---ctttttaataaataattgttctttttcaatgtaaagttactatttttagtt 37055507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 72 - 245
Target Start/End: Complemental strand, 42180229 - 42180057
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||||||||||||| ||||||  ||||||||| |  ||| |||| | || ||| | |||||||||||   ||| |||||||||||| ||   ||||| |    
T  42180229 tttttctatcatgtgtaaatttgcacatgttaagaagtttaaaataaaaattttgtattggaacttgtacatttaatattaaatataaaa---cttttaa 42180133  T
Q  172 ataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    ||||||||||   ||||| |||  |||| |||||||| |||||||| ||||||||| |||||||  ||||||||||    
T  42180132 ataaataattatagttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 42180057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 71 - 235
Target Start/End: Original strand, 36426409 - 36426572
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||| ||||||  ||||||||| |  ||| || || ||| |||  |||||||||||||  ||| ||||||||||| ||    ||||||    
T  36426409 gtttttctatcatgtgtaaatttacacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatatgtag---cttttt 36426505  T
Q  171 aataaataattgatgtttttcaatgaaaa--attactacttttagttgtcttaacatgtccaatgtt 235  Q
    ||||||||| |  |||||||| || ||||  |||||||||||||| | | ||||||||| |||||||    
T  36426506 aataaataagttttgtttttcgataaaaaaaattactacttttagatattttaacatgtgcaatgtt 36426572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 51339276 - 51339341
Alignment:
Q  167 ttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||||| |||||||| || |||||||||||||||||||| ||||||||  |||||||||| ||||    
T  51339276 ttttaatcaataattgttggttttcaatgaaaaattactatttttagttaccttaacatgtgcaat 51339341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 7940969 - 7940838
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    |||||||||||| |||||||||  |   ||||| |  ||| ||||| ||| ||| ||||| ||||| ||| |||||||||||||||   |||||||||||    
T  7940969 tttttctatcatatgcaaatttacatgcgttaagaaatttaaaatggtaaatttgtcttgtaacttctgtattttatattaaatat---ataacttttta 7940873  T
Q  172 ataaataattgatg-tttttcaatgaaaaattact 205  Q
    ||||||||||  || |||||||||||||| |||||    
T  7940872 ataaataattagtgttttttcaatgaaaagttact 7940838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 35095131 - 35094976
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgt--taaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||| ||||||||||||||||  |||| |  |||||  ||| ||||  ||| ||||||||| || || | | |||||||||||||||| ||   |||||    
T  35095131 tttttttatcatgtgcaaatttatacatatattaaaaaatttaaaatagtaaatttatcttgaaatttatatattttatattaaatatacaa---ctttt 35095035  T
Q  170 taataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||||||    |||||||||||||||||| ||||| |||||||||  |||||||||| ||||    
T  35095034 taataaat----gatgtttttcaatgaaaagttactgcttttagttaccttaacatgtgcaat 35094976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 54621275 - 54621368
Alignment:
Q  128 cttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacat 225  Q
    ||||||| |||||| ||||||||||||||| ||| |    |||||| |||||||| || |||| ||||||||||||||||||||| ||  ||||||||    
T  54621275 cttggaagttgtgttttttatattaaatatgtaaca----tttaatcaataattgttggtttttaatgaaaaattactacttttaattaccttaacat 54621368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 37332290 - 37332135
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||| ||| ||||||||||||  ||||||| | |  ||| ||||| ||||||| ||||  || |||||| |||||||||||||||||||    |||||     
T  37332290 tttttttattatgtgcaaatttacacatgttgataaatttaaaatggtaagtttgtctttaaatttgtgtattttatattaaatatataa----tttttc 37332195  T
Q  172 ataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||| ||| |||||||| ||| |||||||  || |||||||||  ||||||||| ||||    
T  37332194 ataaat-attaatgttttttaataaaaaatttgtaattttagttgcattaacatgtgcaat 37332135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 46845531 - 46845582
Alignment:
Q  165 ctttttaataaataattgatgtttttcaatgaaaaattactacttttagttg 216  Q
    |||||||||||||||||| || |||||||| ||||||| |||||||||||||    
T  46845531 ctttttaataaataattgttgattttcaataaaaaatttctacttttagttg 46845582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 50364311 - 50364211
Alignment:
Q  128 cttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    |||||||||||||| ||||||||||||||| |||     ||||||| |||||||| || |||||||| | || |||||||||||||||  ||| ||||||    
T  50364311 cttggaacttgtgttttttatattaaatatgtaa----cttttaatcaataattgttggttttcaattataagttactacttttagttacctttacatgt 50364216  T
Q  228 ccaat 232  Q
     ||||    
T  50364215 gcaat 50364211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 232
Target Start/End: Original strand, 2379162 - 2379227
Alignment:
Q  164 actttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||||||||||||||||   || |||||| |||| ||||||||||||||||| ||||||||| ||||    
T  2379162 actttttaataaataattg---ttattcaataaaaacttactacttttagttgttttaacatgtgcaat 2379227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 27549631 - 27549555
Alignment:
Q  162 taactttttaataaataattgatgtttttcaatgaaaaa---ttactacttttagttgtcttaacatgtccaatgtt 235  Q
    ||||||||| | ||||||||||||| ||| ||| |||||   ||||||||||||||||| ||||||||| |||||||    
T  27549631 taactttttgacaaataattgatgtattttaattaaaaaatattactacttttagttgttttaacatgtgcaatgtt 27549555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 194
Target Start/End: Original strand, 35414808 - 35414929
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||||||||||||||||||||||  ||||||||| |  ||  ||||  ||| ||||| |||||| |||| | |||| |||| |||||   |||||||||    
T  35414808 agtttttctatcatgtgcaaatttacacatgttaagaagttcaaaatagtaactttatattggaagttgtatattttgtatttaatat---ataactttt 35414904  T
Q  170 taataaataattgatgtttttcaat 194  Q
     || ||||||||| |||||||||||    
T  35414905 gaacaaataattgttgtttttcaat 35414929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 38786000 - 38785924
Alignment:
Q  129 ttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactact 208  Q
    |||||||||||  ||||||||||||||||| ||   ||||  |||||||||||| ||||||||||  |||||||||||||    
T  38786000 ttggaacttgtacgttttatattaaatataaaa---ctttcaaataaataattgttgtttttcaaaaaaaaattactact 38785924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 72 - 227
Target Start/End: Complemental strand, 40497224 - 40497073
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||||||||||||||||||||  ||||| ||| |  ||| || |  ||| |||| ||| |||||||||  ||||||||||| ||| ||     ||||||    
T  40497224 tttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttagaacttgtgcattttatattaactatgtaga---ttttta 40497128  T
Q  172 ataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    |||| |||||| || ||| |||| |||| |||||||||||||||| ||||||||||    
T  40497127 ataattaattgttgattt-caataaaaagttactacttttagttgccttaacatgt 40497073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 51567906 - 51567979
Alignment:
Q  163 aactttttaataaataattgatgtttttcaatgaaaaa-ttactacttttagttgtcttaacatgtccaatgtt 235  Q
    ||||||| |||||||||||| |||||| |||  ||||| |||||||| |||||||| ||||||||| |||||||    
T  51567906 aacttttgaataaataattgttgttttccaagaaaaaagttactactattagttgttttaacatgtgcaatgtt 51567979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 342
Target Start/End: Complemental strand, 20871297 - 20871254
Alignment:
Q  298 aaggtaagaagaattcttaacttgagtttggattacaaagctaaa 342  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||    
T  20871297 aaggtaaga-gaactcttaacttgagtttggattacaaagctaaa 20871254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 47387014 - 47386958
Alignment:
Q  161 ataactttttaataaataattgatgttttt-caatgaaaaattactacttttagttg 216  Q
    |||||||||||||||||||||| | ||||| |||| |||| ||||||||||||||||    
T  47387014 ataactttttaataaataattgtttttttttcaataaaaacttactacttttagttg 47386958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 53537080 - 53537128
Alignment:
Q  163 aactttttaataaataattgatgtttttcaatgaaaaattactactttt 211  Q
    |||||||||||||||||||| |||||||||||| ||| |||||| ||||    
T  53537080 aactttttaataaataattgttgtttttcaatgtaaagttactattttt 53537128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 71 - 154
Target Start/End: Original strand, 40330295 - 40330378
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaa 154  Q
    ||||||| ||||||||| |||||  |||||||||||  ||| ||||  ||| |||||||||||||||||   ||||||||||||    
T  40330295 gtttttcaatcatgtgcgaatttgtacatgttaaaaaatttaaaatagtaattttatcttggaacttgttcattttatattaaa 40330378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 157
Target Start/End: Complemental strand, 23523124 - 23523038
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatat 157  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || || ||| |||  |||||||||||||  ||| |||||||||||    
T  23523124 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatat 23523038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 245
Target Start/End: Complemental strand, 24087070 - 24086989
Alignment:
Q  166 tttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    |||| |||||||||||| ||||||| ||  |||| |||||||| |||||||| |||| |||| |||||||  ||||||||||    
T  24087070 ttttgaataaataattgttgttttttaagaaaaatttactactgttagttgttttaagatgtgcaatgttgcacatgttaga 24086989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 71 - 206
Target Start/End: Complemental strand, 29686498 - 29686367
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||| ||| |  ||| || |  ||| |||| ||| |||||||||| |||||||||| ||||||    |  ||||    
T  29686498 gtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttagaacttgtgttttttatattacatatat----agctttt 29686403  T
Q  171 aataaataattgatgtttttcaatgaaaaattacta 206  Q
    |||||||||||| || | |||| |||||| ||||||    
T  29686402 aataaataattgttgatattcagtgaaaagttacta 29686367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 30214103 - 30214156
Alignment:
Q  167 ttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtctta 221  Q
    |||||||||||||||| || ||||||||||||| |||||| ||||||||| ||||    
T  30214103 ttttaataaataattgttgattttcaatgaaaagttacta-ttttagttgcctta 30214156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 232
Target Start/End: Complemental strand, 37444232 - 37444167
Alignment:
Q  166 tttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||||||| |||||| || ||| |||| |||| |||||||||||||||| |||||||||| ||||    
T  37444232 tttttaataattaattgttgattt-caataaaaagttactacttttagttgccttaacatgtgcaat 37444167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 49396442 - 49396388
Alignment:
Q  161 ataactttttaataaataattgatgtttttcaatgaaaaattactacttttagtt 215  Q
    ||||||||||||||||||||||  |||||||||| |||||||  || ||||||||    
T  49396442 ataactttttaataaataattgtagtttttcaatcaaaaattgttatttttagtt 49396388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 23803104 - 23803180
Alignment:
Q  129 ttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactact 208  Q
    ||||||||||| | ||| |||||||||||| ||   ||||| |||||||||||| ||||||||||  |||| ||||||||    
T  23803104 ttggaacttgtatatttcatattaaatataaaa---cttttgaataaataattgttgtttttcaagaaaaagttactact 23803180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 29932400 - 29932441
Alignment:
Q  119 taagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||    
T  29932400 taagtttatattggaacttgtgtattttacattaaatatata 29932441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 29981554 - 29981595
Alignment:
Q  119 taagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||    
T  29981554 taagtttatattggaacttgtgtattttacattaaatatata 29981595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 43750117 - 43750072
Alignment:
Q  187 ttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||| ||||| |||||||||||||| ||||||||||||| ||||    
T  43750117 ttttcagtgaaacattactacttttagatgtcttaacatgtgcaat 43750072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 206
Target Start/End: Original strand, 1569191 - 1569322
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||||||||||||  |||||   ||||||||| |  ||| |||| |||| ||| | |||||||||||   |||||||||| |||| |||   |||| ||    
T  1569191 tttttctatcatgtataaattcgtacatgttaagaagtttaaaataataactttgtattggaacttgttcattttatattagatatgtaa---ctttcta 1569287  T
Q  172 ataaataattgatgtttttcaatgaaaaattacta 206  Q
    |||||| |||| ||||||| ||| |||||||||||    
T  1569288 ataaattattgttgttttttaataaaaaattacta 1569322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 225
Target Start/End: Original strand, 26486439 - 26486525
Alignment:
Q  133 aacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacat 225  Q
    ||||||||| |||||||||||||||||| |   |||||||||||||||   ||||||| ||| | ||  |||||||||||||||  |||||||    
T  26486439 aacttgtgtattttatattaaatatatagt---tttttaataaataat---tgttttttaataataagctactacttttagttgctttaacat 26486525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 158
Target Start/End: Original strand, 48346364 - 48346450
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatata 158  Q
    ||||||||||| ||||| ||||||  ||||||||| |  ||| ||||| ||||||| | ||||||||||||  ||||||||||||||||    
T  48346364 agtttttctataatgtgtaaatttgaacatgttaaca-atttaaaatggtaagtttgttttggaacttgtg-attttatattaaatata 48346450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 72 - 256
Target Start/End: Original strand, 16667385 - 16667568
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||||||||||||||||||||  ||||||||| |  ||| ||||||||| |||| |||| ||||||||| ||||||||||||||| ||    |||||||    
T  16667385 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatgataattttaacttgaaacttgtgtattttatattaaatatgtag---cttttta 16667481  T
Q  172 ataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttagagaaagcctaat 256  Q
    |||||||| || |||||||||||||||||||||||||||||| ||||||||||||| |||||||  |||||||||| ||| ||||||    
T  16667482 ataaataagtgttgtttttcaatgaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttagacaaaccctaat 16667568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 70 - 235
Target Start/End: Original strand, 47326891 - 47327053
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||||||||||||||||||||||  ||||||||| |  ||| || || ||| |||  |||||||||| ||  ||| ||||||||||| || |   ||||    
T  47326891 agtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaatatgtagt---tttt 47326987  T
Q  170 taataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt 235  Q
    |||||||||| |  |||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  47326988 taataaataagttttgtttttcaatgaaaaattactacttttagatgtcttaacatgtgcaatgtt 47327053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 70 - 235
Target Start/End: Original strand, 47341687 - 47341849
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||||||||||||||||||||||  ||||||||| |  ||| || || ||| |||  |||||||||| ||  ||| ||||||||||| || |   ||||    
T  47341687 agtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaatatgtagt---tttt 47341783  T
Q  170 taataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt 235  Q
    |||||||||| |  |||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  47341784 taataaataagttttgtttttcaatgaaaaattactacttttagatgtcttaacatgtgcaatgtt 47341849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 71 - 256
Target Start/End: Original strand, 54495637 - 54495821
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || || ||| |||| |||||||||||||  ||| ||||||||||| ||    ||||||    
T  54495637 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttaacttggaacttgtgcatttcatattaaatatgtag---cttttt 54495733  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttagagaaagcctaat 256  Q
    ||||||||| |  ||||||||||  |||||||||||||||||| | ||||||||||| |||||||  |||||||||| ||| ||||||    
T  54495734 aataaataagttttgtttttcaaaaaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaaccctaat 54495821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 70 - 245
Target Start/End: Complemental strand, 23545655 - 23545481
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||||||||||||||||||||||  ||||||||| |  ||| ||||   || ||| | |||||| ||||   ||| |||||||||||| ||   |||||    
T  23545655 agtttttctatcatgtgcaaatttgcacatgttaataagtttaaaatataaattttgtattggaaattgtacatttaatattaaatataaaa---ctttt 23545559  T
Q  170 taataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
     |||||||||||| ||||||||||  ||||||||||||| |||||||| ||||||||| |||||||  ||||||||||    
T  23545558 gaataaataattgttgtttttcaagaaaaaattactactattagttgttttaacatgtgcaatgttgcacatgttaga 23545481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 245
Target Start/End: Original strand, 8736811 - 8736983
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    ||||||||||| |||| ||||||  ||||||||| |  ||| || || ||| |||  |||||||| ||||  ||| |||||||||||    |||||||||    
T  8736811 gtttttctatcgtgtgtaaatttgcacatgttaagaaatttaaagtggtaactttgacttggaac-tgtgcatttcatattaaatat---gtaacttttt 8736906  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    ||||||||| |  ||||||||||| |||||||||||||||||| ||||||||||||| |||||||  ||||||||||    
T  8736907 aataaataagttttgtttttcaataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttaga 8736983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 225
Target Start/End: Original strand, 29190816 - 29190966
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || |  ||| |||  |||||||||||||| ||| |||||||||||  || |    |||    
T  29190816 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttggaacttgtgtttttaatattaaatatgcaaca----ttt 29190911  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacat 225  Q
    ||| |||||||| || |||||||||||||||||||||||||||||  ||||||||    
T  29190912 aatcaataattgttggttttcaatgaaaaattactacttttagttaccttaacat 29190966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 216
Target Start/End: Complemental strand, 2097049 - 2096907
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||| |||| |||| ||||||  ||||||||| |  ||  ||||| ||||||| | ||||||||||||  |||||||||||||||||||   ||||||    
T  2097049 gtttttttatcctgtgaaaatttgcacatgttaagaagttcaaaatggtaagtttgtattggaacttgtgcattttatattaaatatataa---cttttt 2096953  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttg 216  Q
    |||||||||||| ||||||||||| |||| ||   |||||||||||    
T  2096952 aataaataattgttgtttttcaataaaaagttgtcacttttagttg 2096907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 235
Target Start/End: Complemental strand, 27362569 - 27362408
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || || ||| |||  ||||||| |||||  ||| ||||||||||| ||    ||||||    
T  27362569 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaatttgtgcatttcatattaaatatgtag---cttttt 27362473  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt 235  Q
     |||||||| |  ||||||||||| |||||||||||||||||| | ||||||||| | |||||||    
T  27362472 gataaataagttttgtttttcaataaaaaattactacttttagatatcttaacatatgcaatgtt 27362408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 133 - 232
Target Start/End: Complemental strand, 6875617 - 6875521
Alignment:
Q  133 aacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||||||| ||||||||||||| |||||   ||||| |||||||||||||| |||| |||| ||| ||||||| |||||||||| ||||||||| ||||    
T  6875617 aacttgtgtattttatattaaatttataa---cttttcaataaataattgatattttccaataaaatattactatttttagttgttttaacatgtgcaat 6875521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 72 - 198
Target Start/End: Original strand, 51070399 - 51070520
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||||||||||||| ||||||  ||  ||||| |  ||| ||||| ||||||| | ||| ||||||||| |||||||||||||||||||   |||||||    
T  51070399 tttttctatcatgtgaaaatttgcac--gttaagaaatttaaaatggtaagtttgttttgtaacttgtgtattttatattaaatatataa---cttttta 51070493  T
Q  172 ataaataattgatgtttttcaatgaaa 198  Q
    |||||| |||| |||||||||||||||    
T  51070494 ataaatgattggtgtttttcaatgaaa 51070520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 227
Target Start/End: Complemental strand, 25843472 - 25843316
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtg--ttttatattaaatatataataacttt 168  Q
    |||||||||||| ||||||||||  | |||||||||  ||| || |  ||| ||| |||| |||||| ||||  |||||||||||||||||||   ||||    
T  25843472 gtttttctatcacgtgcaaatttgtagatgttaaaaagtttaaagtagtaactttgtcttagaacttttgtgcattttatattaaatatataag--cttt 25843375  T
Q  169 ttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    |||| ||||  ||| ||||||||||| |||| ||||||||||||||||  |||||||||    
T  25843374 ttaacaaatggttgttgtttttcaataaaaagttactacttttagttgctttaacatgt 25843316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 71 - 245
Target Start/End: Complemental strand, 17410002 - 17409829
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||| ||| |  ||| ||||   || ||| | |||||||||||   ||| |||||||||||| | |   ||||     
T  17410002 gtttttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatataaatt---ttttg 17409906  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    |||||||||||| ||||||||||  |||| |||||||| |||||||| ||||||||| |||||||  ||||||||||    
T  17409905 aataaataattgttgtttttcaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 17409829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 71 - 245
Target Start/End: Original strand, 19450900 - 19451073
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||| ||||||||||||  ||||||||| |  ||| ||||   || ||| | |||||||||||   ||| |||||||||||| ||   |||||     
T  19450900 gtttttctattatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaa---cttttg 19450996  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    |||||||||||| |||||| |||  |||| |||||||| |||||||| ||||||||| |||||||  ||||||||||    
T  19450997 aataaataattgttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 19451073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 71 - 245
Target Start/End: Original strand, 33632203 - 33632375
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    ||||||||||||||||| |||||  |||||||||||  ||| |||| | || ||||| ||| |||||||   ||| |||||||||||| ||   |||||     
T  33632203 gtttttctatcatgtgcgaatttgcacatgttaaaaagtttaaaat-agaaatttatattgaaacttgtacatttaatattaaatataaaa---cttttg 33632298  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    |||||||||||| ||||||||||  |||| |||||||| |||||||| || ||||||  ||||||  ||||||||||    
T  33632299 aataaataattgttgtttttcaaaaaaaagttactactattagttgtttttacatgtataatgttgcacatgttaga 33632375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 232
Target Start/End: Complemental strand, 7349804 - 7349709
Alignment:
Q  133 aacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||||||| ||||||||||||||| |||     |||||| ||||||||| || ||||||||||||| ||| |||||||||||| |||||||||| ||||    
T  7349804 aacttgtgttttttatattaaatatgtaa----cttttaacaaataattgttggttttcaatgaaaagttattacttttagttgccttaacatgtgcaat 7349709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 235
Target Start/End: Complemental strand, 27019438 - 27019277
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  | |||||||||  ||| ||||   || ||| | ||| |||||||   ||| |||||||||||| ||   |||||     
T  27019438 gtttttctatcatgtgcaaatttgcatatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaa---cttttg 27019342  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt 235  Q
    |||||||||||| |||||| |||  |||| |||||||| |||||||| ||||||||| |||||||    
T  27019341 aataaataattgttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgtt 27019277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 39539551 - 39539481
Alignment:
Q  165 ctttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt 235  Q
    ||||||||||||||| || |||||||||||||||||||||||  ||||| ||||||| ||||| |||||||    
T  39539551 ctttttaataaataagtgttgtttttcaatgaaaaattactaagtttagatgtcttagcatgtgcaatgtt 39539481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 27298982 - 27298938
Alignment:
Q  161 ataactttttaataaataattgatgtttttcaatgaaaaattact 205  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  27298982 ataactttttaataaataattggtgtttttcaatgaaaaattact 27298938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 42479894 - 42479982
Alignment:
Q  73 ttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataa 161  Q
    |||||||||||||||||||||  ||||||||| |  ||| | ||||||| ||| ||||||||||||||  |||||||| ||||||||||    
T  42479894 ttttctatcatgtgcaaatttgcacatgttaagaaatttaatatgataaatttgtcttggaacttgtgcattttatatcaaatatataa 42479982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 70 - 215
Target Start/End: Complemental strand, 53961501 - 53961360
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    |||||||||||| |||||||||||  ||||||||| |  ||| || |  ||| |||  |||| || |||||| ||||||||||||||| ||| |    ||    
T  53961501 agtttttctatcgtgtgcaaatttgcacatgttaagaagtttaaattagtaattttgacttgaaatttgtgttttttatattaaatatgtaaca----tt 53961406  T
Q  170 taataaataattgatgtttttcaatgaaaaattactacttttagtt 215  Q
    |||  |||||||| || |||||||||||||||||||||||||||||    
T  53961405 taaacaataattgttgattttcaatgaaaaattactacttttagtt 53961360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 245
Target Start/End: Complemental strand, 19468372 - 19468199
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||| ||||||||||||  ||||||||| |  ||| ||||   || ||| | ||| |||||||   ||| |||||||||||| ||   |||||     
T  19468372 gtttttctattatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaa---cttttg 19468276  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    |||||||||||| |||||| |||  |||| |||||||| |||||||| ||||||||| |||||||  ||||||||||    
T  19468275 aataaataattgttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 19468199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 49181250 - 49181092
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  || |||||| |  ||  ||||  ||| ||| | ||| ||||||||  ||||||||||||||| |||   |||||     
T  49181250 gtttttctatcatgtgcaaatttgcacctgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaa---cttttc 49181154  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||||| |||| ||||||||||| |||  || ||||||||||||  |||||||||| ||||    
T  49181153 aataaatgattgttgtttttcaattaaaggttgctacttttagtttccttaacatgtgcaat 49181092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 207
Target Start/End: Original strand, 9326865 - 9327002
Alignment:
Q  71 gtttttctatcatgtgcaaa--ttttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttt 168  Q
    |||| |||||||||||||||  |||  ||||||||| |  ||| |||||| |||||||||||||||||||||| || |||||||||||    | ||||||    
T  9326865 gtttctctatcatgtgcaaaaatttgcacatgttaagaaatttaaaatgacaagtttatcttggaacttgtgtattctatattaaata---gacaacttt 9326961  T
Q  169 ttaataaataattga---tgtttttcaatgaaaaattactac 207  Q
    ||||| |||||||||   | |||||||||||||| |||||||    
T  9326962 ttaat-aataattgatactatttttcaatgaaaagttactac 9327002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 207
Target Start/End: Original strand, 9373587 - 9373724
Alignment:
Q  71 gtttttctatcatgtgcaaa--ttttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttt 168  Q
    |||| |||||||||||||||  |||  ||||||||| |  ||| |||||| |||||||||||||||||||||| || |||||||||||    | ||||||    
T  9373587 gtttctctatcatgtgcaaaaatttgcacatgttaagaaatttaaaatgacaagtttatcttggaacttgtgtattctatattaaata---gacaacttt 9373683  T
Q  169 ttaataaataattga---tgtttttcaatgaaaaattactac 207  Q
    ||||| |||||||||   | |||||||||||||| |||||||    
T  9373684 ttaat-aataattgatactatttttcaatgaaaagttactac 9373724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 207
Target Start/End: Original strand, 9381899 - 9382036
Alignment:
Q  71 gtttttctatcatgtgcaaa--ttttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttt 168  Q
    |||| |||||||||||||||  |||  ||||||||| |  ||| |||||| |||||||||||||||||||||| || |||||||||||    | ||||||    
T  9381899 gtttctctatcatgtgcaaaaatttgcacatgttaagaaatttaaaatgacaagtttatcttggaacttgtgtattctatattaaata---gacaacttt 9381995  T
Q  169 ttaataaataattga---tgtttttcaatgaaaaattactac 207  Q
    ||||| |||||||||   | |||||||||||||| |||||||    
T  9381996 ttaat-aataattgatactatttttcaatgaaaagttactac 9382036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 49332424 - 49332358
Alignment:
Q  161 ataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    ||||||||||||||||||||| || |||||||||||||| ||| |||||||| ||  ||||||||||    
T  49332424 ataactttttaataaataattaatatttttcaatgaaaagttattacttttaattaccttaacatgt 49332358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 189
Target Start/End: Complemental strand, 1378196 - 1378081
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||||||||||| |||||| |||  ||||||||| |  ||| ||||| ||| ||||||||| |||||||   ||| ||||||||||||||| |   |||    
T  1378196 agtttttctatcaggtgcaa-tttgcacatgttaagaaatttaaaatggtaaatttatcttgaaacttgtacatttaatattaaatatataaca---ttt 1378101  T
Q  170 taataaataattgatgtttt 189  Q
    ||||||||||||||||||||    
T  1378100 taataaataattgatgtttt 1378081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 227
Target Start/End: Complemental strand, 52391475 - 52391323
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||||||||||||| ||||||  ||||||||| |  ||| ||||   || ||| | |||||||||||   ||| |||||||||||| ||   ||||| |    
T  52391475 tttttctatcatgtgtaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaa---cttttga 52391379  T
Q  172 ataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    ||||||||||| ||||||||||  |||| |||||||| |||||| | |||||||||    
T  52391378 ataaataattgttgtttttcaaaaaaaagttactactattagttattttaacatgt 52391323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 24297461 - 24297390
Alignment:
Q  163 aactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgt 234  Q
    ||||||| |||||||||||| ||||||||||  ||||||||||||| ||| |||| ||||||| | ||||||    
T  24297461 aacttttaaataaataattgttgtttttcaaaaaaaaattactactattaattgttttaacatatgcaatgt 24297390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 42480009 - 42480064
Alignment:
Q  161 ataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttg 216  Q
    |||||||||||||||||||||||||||||||||| |||  || ||||| |||||||    
T  42480009 ataactttttaataaataattgatgtttttcaataaaatgttgctactcttagttg 42480064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 208
Target Start/End: Original strand, 16069299 - 16069341
Alignment:
Q  166 tttttaataaataattgatgtttttcaatgaaaaattactact 208  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  16069299 tttttaataaataattgttgtttttcaataaaaaattactact 16069341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 232
Target Start/End: Original strand, 36000002 - 36000097
Alignment:
Q  133 aacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||||||| ||||||||||||||| ||      ||||||| |||||||| || |||||||| |||| |||||||||||||||  |||||||||| ||||    
T  36000002 aacttgtgttttttatattaaatatgtagc----ttttaatcaataattgttggttttcaataaaaagttactacttttagttaccttaacatgtacaat 36000097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 41415649 - 41415703
Alignment:
Q  167 ttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtctta 221  Q
    |||||||||||||||| || |||||||| |||| |||||||||||||||| ||||    
T  41415649 ttttaataaataattgttgattttcaattaaaagttactacttttagttgcctta 41415703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 235
Target Start/End: Complemental strand, 51691519 - 51691359
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||| ||||||  ||||||||| |  ||||||||  ||| |||   ||||||||||| | ||||  |||||||||   ||| ||||||    
T  51691519 gtttttctatcatgtgtaaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgtatattttgaattaaatat---atagcttttt 51691423  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt 235  Q
    |||||||||||  |  |||||||| || | |||||| |||||||||  ||||||||| |||||||    
T  51691422 aataaataattattagttttcaataaagacttacta-ttttagttgctttaacatgtgcaatgtt 51691359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 3085441 - 3085357
Alignment:
Q  163 aactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    ||||||| |||| ||||||| | ||||||||  ||||||||||||| ||| |||| ||||||||| |||||||  ||||||||||    
T  3085441 aacttttgaatatataattgttatttttcaagaaaaaattactactattaattgttttaacatgtgcaatgttgcacatgttaga 3085357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 161 - 238
Target Start/End: Complemental strand, 34941369 - 34941292
Alignment:
Q  161 ataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgttaca 238  Q
    |||||||||||||||||| ||| ||||||||||| |||| ||  |||||||||||  ||||| |||| |||| |||||    
T  34941369 ataactttttaataaatagttgttgtttttcaataaaaagttgttacttttagttaccttaatatgtgcaatattaca 34941292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 200
Target Start/End: Original strand, 53376408 - 53376535
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||| ||||||||| ||||||  ||||||||| |  ||| |||| | |||||| | ||  ||| ||||  ||||||||||||| |||| |||||||||    
T  53376408 gtttttttatcatgtgaaaatttgcacatgttaagaagtttaaaataagaagtttgtattaaaacctgtgcattttatattaaat-tata-taacttttt 53376505  T
Q  171 aataaataattgatgtttttcaatgaaaaa 200  Q
    ||||||| |||| ||||||||||| |||||    
T  53376506 aataaatgattgttgtttttcaataaaaaa 53376535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 13009813 - 13009916
Alignment:
Q  129 ttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtc 228  Q
    ||||||||||| | |||| |||||||||||||    ||||||| |||||||||  |  |||||||| |||| ||| ||||||||||||| ||||||| |     
T  13009813 ttggaacttgtatattttgtattaaatatatag---ctttttagtaaataattattagttttcaataaaaacttaatacttttagttgttttaacatatg 13009909  T
Q  229 caatgtt 235  Q
    |||||||    
T  13009910 caatgtt 13009916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 227
Target Start/End: Complemental strand, 24685012 - 24684861
Alignment:
Q  74 tttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttttaat 173  Q
    ||||||||||||||||||||  ||||||||| |  ||| ||||   || |||   |||||||||||   ||| |||||||||||| ||   ||||| |||    
T  24685012 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgcattggaacttgtacatttaatattaaatataaaa---cttttgaat 24684916  T
Q  174 aaataattgatgtttttcaatgaaaaa-ttactacttttagttgtcttaacatgt 227  Q
    ||||||||| |||||| |||  ||||| |||||||| |||||||| |||||||||    
T  24684915 aaataattgttgttttccaaaaaaaaagttactactattagttgttttaacatgt 24684861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 35645073 - 35645127
Alignment:
Q  143 ttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaa 200  Q
    |||||||||||||||||||   |||||||||||||||||| | ||||||||| |||||    
T  35645073 ttttatattaaatatataa---ctttttaataaataattgttatttttcaataaaaaa 35645127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 10813587 - 10813645
Alignment:
Q  167 ttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacat 225  Q
    |||||| ||||||||| || |||||||| |||| ||| |||||||||||| ||||||||    
T  10813587 ttttaacaaataattgttggttttcaataaaaagttattacttttagttgccttaacat 10813645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 232
Target Start/End: Complemental strand, 27756690 - 27756582
Alignment:
Q  120 aagtttatcttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtct 219  Q
    |||||| ||||| ||||||| | || |||||||||||    ||||||||||||| |||||||| |||||| ||||| ||| || |||| |||||||  ||    
T  27756690 aagtttgtcttgaaacttgtatattctatattaaata---gataactttttaat-aataattggtgttttccaatgcaaagttgctacatttagtttcct 27756595  T
Q  220 taacatgtccaat 232  Q
    |||||||| ||||    
T  27756594 taacatgtgcaat 27756582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 38222392 - 38222323
Alignment:
Q  143 ttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagtt 215  Q
    ||||||||||||||||||||   ||||||||||||||||| || |||||| | |||| ||  |||||||||||    
T  38222392 ttttatattaaatatataat---tttttaataaataattgttgattttcactaaaaatttgttacttttagtt 38222323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 216
Target Start/End: Complemental strand, 23438241 - 23438192
Alignment:
Q  167 ttttaataaataattgatgtttttcaatgaaaaattactacttttagttg 216  Q
    ||||||||||| |||| ||||||||||| |||| ||||||| ||||||||    
T  23438241 ttttaataaattattgttgtttttcaataaaaagttactacatttagttg 23438192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 32459460 - 32459419
Alignment:
Q  119 taagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||    
T  32459460 taagtttatattggaacttgtgtattttacattaaatatata 32459419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 37784948 - 37785001
Alignment:
Q  162 taactttttaataaataattgatgtttttcaatgaaaaattactacttttagtt 215  Q
    |||||||||||||||| |||  ||||||||||| |||| || ||||||||||||    
T  37784948 taactttttaataaatgattattgtttttcaataaaaagttgctacttttagtt 37785001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 43759515 - 43759556
Alignment:
Q  119 taagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||    
T  43759515 taagtttatattggaacttgtgtattttacattaaatatata 43759556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 49228441 - 49228384
Alignment:
Q  168 tttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacat 225  Q
    |||||| || ||||| || ||||||||||||| |||||||||||||||  ||||||||    
T  49228441 tttaatcaacaattgttggttttcaatgaaaagttactacttttagttaccttaacat 49228384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 136 - 182
Target Start/End: Complemental strand, 33559314 - 33559271
Alignment:
Q  136 ttgtgtgttttatattaaatatataataactttttaataaataattg 182  Q
    |||||| ||||||||||||||||||||   |||||||||||||||||    
T  33559314 ttgtgtattttatattaaatatataat---tttttaataaataattg 33559271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 48910894 - 48910942
Alignment:
Q  167 ttttaataaataattgatgtttttcaatgaaaaattactacttttagtt 215  Q
    ||||||| |||||||| |  |||||||| ||||||||||||||||||||    
T  48910894 ttttaatcaataattgttaattttcaataaaaaattactacttttagtt 48910942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 194
Target Start/End: Complemental strand, 55814041 - 55813922
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||| |||||| |||||||||  |||||||||||  ||| |||| |||| ||| | ||| || ||||   || | ||||||||||   |||||||||||    
T  55814041 tttttgtatcatatgcaaatttgcacatgttaaaaagtttaaaataataattttgtattgaaatttgtacattctgtattaaatat---ataacttttta 55813945  T
Q  172 ataaataattgatgtttttcaat 194  Q
    ||||||||||| || ||||||||    
T  55813944 ataaataattgttgattttcaat 55813922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 3e-33; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 19868249 - 19868134
Alignment:
Q  114 aatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttag 213  Q
    |||| ||||||| ||||| ||||||||| |||||||||||||||||||   |||||| ||||||||||| |||||||||||||||| |||||||||||||    
T  19868249 aatggtaagtttgtcttgaaacttgtgtattttatattaaatatataa---ctttttgataaataattggtgtttttcaatgaaaatttactacttttag 19868153  T
Q  214 ttgtcttaacatgtccaat 232  Q
    |||||||||||||| ||||    
T  19868152 ttgtcttaacatgtgcaat 19868134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 72 - 205
Target Start/End: Original strand, 7899487 - 7899617
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||||||||||||||||||||  |||||||||||  ||| ||||| ||||||| ||||  ||||||| | |||||||||||||||   ||||| |||||    
T  7899487 tttttctatcatgtgcaaatttgcacatgttaaaaaatttaaaatggtaagtttgtcttataacttgtatattttatattaaatat---ataacatttta 7899583  T
Q  172 ataaataattgatgtttttcaatgaaaaattact 205  Q
    |||||| |||| ||||||||||||||||||||||    
T  7899584 ataaattattggtgtttttcaatgaaaaattact 7899617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 19889518 - 19889361
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||| ||| |  ||| || |  ||| |||  |||||||||||||| ||||||||||||||| |||     ||||    
T  19889518 gtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaa----ctttt 19889423  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||||||||| || ||||||||||||| |||||||||||||||| |||||||||| ||||    
T  19889422 aataaataattgttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaat 19889361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 232
Target Start/End: Original strand, 39757110 - 39757267
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| ||||  ||| |||| |||| || |||||| ||||||||||||||| ||      ||||    
T  39757110 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttaacttgaaatttgtgttttttatattaaatatgtagc----tttt 39757205  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||| |||||||| || |||||||||||||||||||||||||||||  |||||||||| ||||    
T  39757206 aatcaataattgttgattttcaatgaaaaattactacttttagttaccttaacatgtgcaat 39757267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 71 - 200
Target Start/End: Original strand, 8420833 - 8420959
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    ||||||||||||||  |||||||  |||||||||||  ||| ||||| ||||||||||||  ||||||||| |||||||||||||||   | ||||||||    
T  8420833 gtttttctatcatgaacaaatttgtacatgttaaaaaatttaaaatggtaagtttatcttataacttgtgtcttttatattaaatat---acaacttttt 8420929  T
Q  171 aataaataattgatgtttttcaatgaaaaa 200  Q
    ||||||||||||||| |||| ||| |||||    
T  8420930 aataaataattgatgctttttaataaaaaa 8420959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 227
Target Start/End: Original strand, 23982755 - 23982908
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||| ||||| |  ||| || |  ||| |||  |||||||||||||| ||||||||||||||| |||    |||||    
T  23982755 gtttttctatcatgtgcaaatttgcacacgttaagaaatttaaagtagtaactttgacttggaacttgtgtattttatattaaatatttaag---ttttt 23982851  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    ||||| |||||| || |||| |||||||| |||||||||||||||| ||||||||||    
T  23982852 aataattaattgttggttttgaatgaaaagttactacttttagttgccttaacatgt 23982908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 9332139 - 9331982
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || |  ||| |||  |||| ||||||||| ||||||||||||||| ||| |    |||    
T  9332139 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatatgtaaca----ttt 9332044  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||| |||||||| || ||||||||||||| |||||||||||||||  |||||||||| ||||    
T  9332043 aatcaataattgttgattttcaatgaaaagttactacttttagttaccttaacatgtgcaat 9331982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 128 - 238
Target Start/End: Original strand, 12085988 - 12086094
Alignment:
Q  128 cttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    |||| ||||||||| ||||||||||||||| |||     |||||||||||||||| || ||||||| ||||| |||||||||||||||| ||||||||||    
T  12085988 cttgaaacttgtgttttttatattaaatatttaa----cttttaataaataattgttgattttcaacgaaaagttactacttttagttgccttaacatgt 12086083  T
Q  228 ccaatgttaca 238  Q
     |||| |||||    
T  12086084 gcaatattaca 12086094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 70 - 232
Target Start/End: Original strand, 25709398 - 25709557
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||||||||||||||||||||||  ||||||||| |  ||| ||||  ||| ||| | |||||||||||   ||| ||||||||||  ||    |||||    
T  25709398 agtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtattggaacttgttcatttcatattaaataggtag---ctttt 25709494  T
Q  170 taataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||||| |||| ||||| ||||| |||||||||||||||||||||  ||||||||| ||||    
T  25709495 taataaattattgttgtttatcaataaaaaattactacttttagttgatttaacatgtgcaat 25709557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 32117992 - 32117835
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || ||  |||||||||||| ||||||| | || |||||||||||    ||||||||||    
T  32117992 gtttttctatcatgtgcaaatttgcacatgttaagaaatttaaagtggcaagtttatcttgaaacttgtatattctatattaaata---gataacttttt 32117896  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||| |||||||| |||||| ||||| ||| || |||| |||||||  |||||||||| ||||    
T  32117895 aat-aataattggtgttttccaatgcaaagttgctacatttagtttccttaacatgtgcaat 32117835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 128 - 232
Target Start/End: Original strand, 47120251 - 47120351
Alignment:
Q  128 cttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    |||||||||||||| ||||||||||||||| ||| |    |||||| |||||||| || |||||||||||||||||||||||||||||  | ||||||||    
T  47120251 cttggaacttgtgttttttatattaaatatgtaaca----tttaatcaataattgttggttttcaatgaaaaattactacttttagttaccataacatgt 47120346  T
Q  228 ccaat 232  Q
     ||||    
T  47120347 gcaat 47120351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 62 - 232
Target Start/End: Original strand, 5909273 - 5909439
Alignment:
Q  62 attttatcagtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataa 161  Q
    |||||||  |||||||||||||||| ||||||  ||||| ||| |  ||| || |  ||| |||  |||| ||||||||| ||||||||||||||| ||     
T  5909273 attttatgggtttttctatcatgtgtaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtag 5909372  T
Q  162 taactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
         |||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||||||| ||||    
T  5909373 c----ttttaataaataattgttggttttcaatgaaaagttactgcttttagttgccttaacatgtgcaat 5909439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 12650912 - 12650841
Alignment:
Q  161 ataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||||||||||||||||||| |  ||||||||||||| |||||| ||||||||| |||||||||| ||||    
T  12650912 ataactttttaataaataattggtagttttcaatgaaaagttactatttttagttggcttaacatgtacaat 12650841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 263
Target Start/End: Original strand, 3561878 - 3562068
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || |  ||| |||| |||  ||||||||| ||||||||||||||| ||      ||||    
T  3561878 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttatattaaatatgtagc----tttt 3561973  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttagagaaagcctaattttatta 263  Q
    ||| |||||||  || ||||||||||||| ||||| |||||||||  |||||||||| |||| ||  |||||||||| ||| |||  ||||||||    
T  3561974 aatcaataattattgattttcaatgaaaagttactgcttttagttaccttaacatgtgcaatattgcacatgttagacaaatcctttttttatta 3562068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 24699225 - 24699156
Alignment:
Q  162 taactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||||| ||||||||||||| |||||||||||||||| |||||| ||||||| |||||||||||| ||||    
T  24699225 taactttataataaataattgttgtttttcaatgaaaagttacta-ttttagtagtcttaacatgtgcaat 24699156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 241
Target Start/End: Original strand, 31066800 - 31066903
Alignment:
Q  136 ttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt 235  Q
    |||||| |||||||| |||||||||||   ||||||||||||| ||  ||||||| ||| |||| |||||||||||| || | ||||||||| |||||||    
T  31066800 ttgtgtattttatatcaaatatataatt--tttttaataaatagttcttgttttttaataaaaagttactacttttacttattttaacatgtgcaatgtt 31066897  T
Q  236 acatgt 241  Q
    ||||||    
T  31066898 acatgt 31066903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 2276791 - 2276719
Alignment:
Q  133 aacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactact 208  Q
    ||||||||| |||||||||||||| ||||   |||||||||||||||||| |||||||||||||| | ||||||||    
T  2276791 aacttgtgtattttatattaaatagataa---ctttttaataaataattggtgtttttcaatgaagagttactact 2276719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 70 - 215
Target Start/End: Original strand, 384430 - 384570
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    |||||||||||||| |||||||||  ||||||||| |  ||| || |  ||| |||| |||||||||||| | ||||||||||||||| ||      |||    
T  384430 agtttttctatcat-tgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgttttttttatattaaatatgtagc----ttt 384524  T
Q  170 taataaataattgatgtttttcaatgaaaaattactacttttagtt 215  Q
    |||| |||||||| || ||||||||||||| |||||||||||||||    
T  384525 taatcaataattgttgattttcaatgaaaagttactacttttagtt 384570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 36548532 - 36548617
Alignment:
Q  143 ttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||||||||||||| |||||    |||||| |||||||| || |||||||| ||||||||||||||||||||  |||||||||| ||||    
T  36548532 ttttatattaaatatgtaata----tttaatcaataattgttggttttcaataaaaaattactacttttagttcccttaacatgtgcaat 36548617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 18102232 - 18102364
Alignment:
Q  73 ttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgtttt-atattaaatatataataacttttta 171  Q
    |||||||||||||||||||||  ||||||||| |  ||| || | |||| |||  |||| ||||||||| |||| ||||||||||| ||| |    ||||    
T  18102232 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaattaataactttgacttgaaacttgtgtttttttatattaaatatgtaaca----ttta 18102327  T
Q  172 ataaataattgatgtttttcaatgaaaaattactact 208  Q
    || |||||||| || ||||||||||||||||||||||    
T  18102328 atcaataattgttgattttcaatgaaaaattactact 18102364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 87 - 215
Target Start/End: Complemental strand, 12624798 - 12624675
Alignment:
Q  87 caaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgt 186  Q
    |||||||  ||||||||| |  ||| ||||| ||||||| ||||  ||||||||| |||||||||||||||| ||    ||||||||||||||||||| |    
T  12624798 caaatttgcacatgttaagaaatttaaaatggtaagtttgtctta-aacttgtgtattttatattaaatatacaag---tttttaataaataattgatat 12624703  T
Q  187 ttttcaatgaaaaattactacttttagtt 215  Q
    |||||||| |||||| |||| ||||||||    
T  12624702 ttttcaataaaaaataacta-ttttagtt 12624675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 24250399 - 24250310
Alignment:
Q  167 ttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttagagaaagccta 254  Q
    |||||||||||||||| || ||||||||||||| ||| |||||||||||  |||||||||| |||| ||  |||||||||| ||| ||||    
T  24250399 ttttaataaataattgttggttttcaatgaaaagttaatacttttagtttccttaacatgtgcaatattgcacatgttagacaaacccta 24250310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 227
Target Start/End: Complemental strand, 44807020 - 44806959
Alignment:
Q  166 tttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    ||||||||||||||||  ||||||||| ||||||| |||||||||||  |||||||||||||    
T  44807020 tttttaataaataattattgtttttcagtgaaaaaatactacttttaaatgtcttaacatgt 44806959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 70 - 245
Target Start/End: Complemental strand, 45501638 - 45501464
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||||||||||||||||||||||  |||| |||| |  ||| ||||   || ||| | |||||||||||   ||| |||||||||||| ||   || ||    
T  45501638 agtttttctatcatgtgcaaatttgcacatcttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaa---ctgtt 45501542  T
Q  170 taataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
     |||||||||||| ||||||| ||  |||| |||||||| |||||| | ||||||||| |||||||  ||||||||||    
T  45501541 gaataaataattgttgttttttaagaaaaagttactactattagttattttaacatgtgcaatgttgcacatgttaga 45501464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 8091399 - 8091474
Alignment:
Q  161 ataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtta 236  Q
    |||||||||||||||||||||  || |||||||| |||| || |||||||||||||  || |||||| ||||||||    
T  8091399 ataactttttaataaataattattgattttcaataaaaatttgctacttttagttgctttgacatgtgcaatgtta 8091474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 143 - 200
Target Start/End: Original strand, 11680090 - 11680144
Alignment:
Q  143 ttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaa 200  Q
    |||||||||||||||||||   |||||||||||||||||| ||||||||||| |||||    
T  11680090 ttttatattaaatatataa---ctttttaataaataattgttgtttttcaattaaaaa 11680144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 74 - 227
Target Start/End: Original strand, 24462958 - 24463107
Alignment:
Q  74 tttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttttaat 173  Q
    ||||||||||||||||||||  ||||||||| |  ||| |||| |||| |||  |||  |  ||||   ||||||||||||||| || |   ||||||||    
T  24462958 tttctatcatgtgcaaatttgcacatgttaagaagtttaaaataataactttgacttaaagtttgtacattttatattaaatatgtagt---tttttaat 24463054  T
Q  174 aaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    ||||| ||| |||||| |||| | ||||||||||||||||||| ||||||||||    
T  24463055 aaatacttgttgtttt-caataagaaattactacttttagttgccttaacatgt 24463107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 33343166 - 33343009
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| ||||  ||| ||| | ||||||||||    |||| ||||||||||   ||||||||||    
T  33343166 gtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatagtaactttgtattggaacttgaacattttgtattaaatat---ataacttttt 33343070  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
      |||||||||| ||  ||||||| |||| || ||||||||||||  |||||||||| ||||    
T  33343069 gttaaataattgttg-gtttcaataaaaacttgctacttttagttaccttaacatgtgcaat 33343009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 216
Target Start/End: Complemental strand, 28323311 - 28323172
Alignment:
Q  73 ttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttttaa 172  Q
    |||||||||||||| ||||||  |||||||||||  ||| |||| |||| ||||| || |||||| |   ||||||||| ||||||||||   |||||||    
T  28323311 ttttctatcatgtgtaaatttacacatgttaaaaaatttaaaataataattttatattagaacttatacattttatatttaatatataat---tttttaa 28323215  T
Q  173 taaataattgatgtttttcaatgaaaaattactacttttagttg 216  Q
    |||| ||| | ||||||| ||| |||| || ||| |||||||||    
T  28323214 taaaaaatcgctgttttt-aataaaaacttgctagttttagttg 28323172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 160
Target Start/End: Original strand, 28061324 - 28061412
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    |||||||| |||||||||||||  ||||||||||  |  | || |  ||||||||| ||||||||||||| ||||| ||||||||||||    
T  28061324 tttttctaacatgtgcaaatttgcacatgttaaagatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatata 28061412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 29398224 - 29398287
Alignment:
Q  184 tgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    |||||||||||||||||||| || | |||||||| ||||||||| |||||||  ||||||||||    
T  29398224 tgtttttcaatgaaaaattagtattattagttgttttaacatgtgcaatgttgcacatgttaga 29398287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 232
Target Start/End: Original strand, 47457461 - 47457619
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  |||||||||||  ||| || |  ||| |||  ||||||| || ||  |||||||||| || | ||    |||||     
T  47457461 gtttttctatcatgtgcaaatttgcacatgttaaaaaatttaaagtagtaactttgacttggaatttatgcattttatattatatgtgtag---ctttta 47457557  T
Q  171 aataaataattgatgtttttcaatgaaaa-attactacttttagttgtcttaacatgtccaat 232  Q
    |||||||||||| | |||| |||| |||| |||||||||||||||||| ||||||||| ||||    
T  47457558 aataaataattgttatttt-caataaaaaaattactacttttagttgttttaacatgtgcaat 47457619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 29692629 - 29692699
Alignment:
Q  163 aactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatg 233  Q
    ||||||| |||||||||||| |||||| |||  |||||||| || | |||||||| ||||||||| |||||    
T  29692629 aacttttgaataaataattgttgttttccaagaaaaaattaatattattagttgttttaacatgtgcaatg 29692699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 38760037 - 38759975
Alignment:
Q  163 aactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacat 225  Q
    ||||||| |||||||||||| ||||||||||  |||| |||||| | |||||||| |||||||    
T  38760037 aacttttgaataaataattgttgtttttcaaaaaaaagttactattattagttgttttaacat 38759975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 232
Target Start/End: Complemental strand, 39869209 - 39869143
Alignment:
Q  166 tttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||||||| |||||| || ||||||||||||| |||||| ||||||||   ||||||||| ||||    
T  39869209 tttttaataattaattgttggttttcaatgaaaagttactatttttagtttctttaacatgtgcaat 39869143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 203
Target Start/End: Original strand, 3530115 - 3530242
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||| ||||||||||||||||  |||| |||| |  |||  |||  ||||||| | ||| || |||||  |||||||| |||||||||||   ||||||    
T  3530115 tttttatatcatgtgcaaatttacacatattaagacgtttagaatagtaagtttttattgaaatttgtgcattttatatcaaatatataat---ttttta 3530211  T
Q  172 ataaataattgatgtttttcaatgaaaaatta 203  Q
    ||||||||||| || |||||||| ||||||||    
T  3530212 ataaataattgttg-ttttcaataaaaaatta 3530242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 38798118 - 38798159
Alignment:
Q  119 taagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||    
T  38798118 taagtttatattggaacttgtgtattttacattaaatatata 38798159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 38798256 - 38798297
Alignment:
Q  119 taagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||    
T  38798256 taagtttatattggaacttgtgtattttacattaaatatata 38798297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 42593442 - 42593483
Alignment:
Q  119 taagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||    
T  42593442 taagtttatattggaacttgtgtattttacattaaatatata 42593483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 45645497 - 45645456
Alignment:
Q  119 taagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||    
T  45645497 taagtttatattggaacttgtgtattttacattaaatatata 45645456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 27300514 - 27300466
Alignment:
Q  166 tttttaataaataattgatgtttttcaat-gaaaaattactacttttag 213  Q
    ||||||||||||| || ||||||||||||  ||||||||||||||||||    
T  27300514 tttttaataaatagttaatgtttttcaataaaaaaattactacttttag 27300466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 38554342 - 38554275
Alignment:
Q  145 ttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagtt 215  Q
    |||||||||||||||||    ||||||||| ||||||| ||||||||||| |||| |||| | ||||||||    
T  38554342 ttatattaaatatataaa---tttttaatatataattgttgtttttcaataaaaatttacgatttttagtt 38554275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 5e-32; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 72 - 245
Target Start/End: Complemental strand, 6017033 - 6016861
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||||||||||||||||||||  |||||||||||  ||| || || ||| |||  |||||||||||||  ||| |||||||||||||||   |||||||    
T  6017033 tttttctatcatgtgcaaatttgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatataa---cttttta 6016937  T
Q  172 ataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    | |||||| || |||||||||||||||| ||||||||||||| ||||||| ||||| |||||||  ||||||||||    
T  6016936 aaaaataagtgttgtttttcaatgaaaagttactacttttagatgtcttaccatgtgcaatgttgcacatgttaga 6016861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 71 - 245
Target Start/End: Original strand, 18332688 - 18332861
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||| ||||||||| |  ||| || |||||| |||  |||||||||| ||  ||| ||||||||||||||    ||||||    
T  18332688 gtttttctatcatgtgcaaattttcacatgttaagaagtttaaagtgataattttgacttggaacttatgcatttcatattaaatatatag---cttttt 18332784  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    ||||||||| |  ||||||||||| |||||||||||||||||| | ||||||||||| |||||||  ||||||||||    
T  18332785 aataaataagttttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttaga 18332861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 70 - 245
Target Start/End: Complemental strand, 10887208 - 10887034
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||||||||||||||||||||||  ||||||||| |  ||| || || ||| |||   ||||||||||||| ||||||||||||||| ||    |||||    
T  10887208 agtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgatttggaacttgtgtattttatattaaatatgtag---ctttt 10887112  T
Q  170 taataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    |||||||||| |  ||||||||||| |||||||||||||||||| | ||||||||||| |||||||  ||||||||||    
T  10887111 taataaataagttttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttaga 10887034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 31069583 - 31069734
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||||||||||||||||||||  ||||||||| |  ||| || |  ||| |||  |||||||||||||| ||||||||||||||| ||| |    ||||    
T  31069583 tttttctatcatgtgcaaatttacacatgttaagaagtttaaattagtaactttgacttggaacttgtgttttttatattaaatatgtaaca----ttta 31069678  T
Q  172 ataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    || |||||||| || |||||||| |||| |||||||||||||||  ||||||||||    
T  31069679 atcaataattgttggttttcaataaaaacttactacttttagttaccttaacatgt 31069734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 71 - 232
Target Start/End: Original strand, 2830681 - 2830838
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    ||||||||||||||| |||||||  ||||||||| |  ||| |||| |||| ||||  || ||| |||||| ||||||||||||||| ||      ||||    
T  2830681 gtttttctatcatgtacaaatttgcacatgttaagaagtttaaaataataactttaatttagaatttgtgttttttatattaaatatgtagc----tttt 2830776  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||| |||||||| || ||||||||||||| |||||||||||||||  |||||||||| ||||    
T  2830777 aatcaataattgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaat 2830838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 123 - 232
Target Start/End: Original strand, 22974625 - 22974730
Alignment:
Q  123 tttatcttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaa 222  Q
    |||| |||||||||||||| ||||||||||||||| |||     ||||||| |||||||| || ||||||||||||| |||||||||||||||  |||||    
T  22974625 tttaacttggaacttgtgttttttatattaaatatgtaa----cttttaatcaataattgttgattttcaatgaaaagttactacttttagttaccttaa 22974720  T
Q  223 catgtccaat 232  Q
    ||||| ||||    
T  22974721 catgtgcaat 22974730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 123 - 232
Target Start/End: Complemental strand, 23813776 - 23813671
Alignment:
Q  123 tttatcttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaa 222  Q
    |||| |||||||||||||| ||||||||||||||| |||     ||||||| |||||||| || ||||||||||||| |||||||||||||||  |||||    
T  23813776 tttaacttggaacttgtgttttttatattaaatatgtaa----cttttaatcaataattgttgattttcaatgaaaagttactacttttagttaccttaa 23813681  T
Q  223 catgtccaat 232  Q
    ||||| ||||    
T  23813680 catgtgcaat 23813671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 70 - 227
Target Start/End: Original strand, 30591162 - 30591316
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||||||||||||||||||||||  ||||||||| |  ||||||||| ||| |||   ||| ||||||| | |||| |||||||| |   |||||||||    
T  30591162 agtttttctatcatgtgcaaatttacacatgttaagaagttttaaatggtaattttgcattgtaacttgtatattttgtattaaatgt---ataactttt 30591258  T
Q  170 taataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    | |||||||||||   ||||||||| |||| ||||||| ||||||||  |||||||||    
T  30591259 tgataaataattgtattttttcaataaaaacttactacatttagttgcgttaacatgt 30591316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 123 - 232
Target Start/End: Original strand, 5362945 - 5363050
Alignment:
Q  123 tttatcttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaa 222  Q
    |||| |||||||||||||| ||||||||||||||| ||      ||||||| || ||||| || ||||||||||||| |||||||||||||||  |||||    
T  5362945 tttaacttggaacttgtgttttttatattaaatatgtagc----ttttaatcaacaattgttggttttcaatgaaaagttactacttttagttaccttaa 5363040  T
Q  223 catgtccaat 232  Q
    ||||| ||||    
T  5363041 catgtgcaat 5363050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 12454243 - 12454086
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    ||||||||||||| || ||||||  |||| ||||||  ||| ||||| ||| ||  | ||||||||||||| || |||||||||||    | ||||||||    
T  12454243 gtttttctatcatatgtaaatttgcacattttaaaaaatttaaaatggtaaattggttttggaacttgtgtattctatattaaata---gacaacttttt 12454147  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||  | ||||||||| |||||||| |||||||||||| |||| || ||||||||||| ||||    
T  12454146 aaatagtaattgatg-ttttcaataaaaaattactacatttaattttcttaacatgtgcaat 12454086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 245
Target Start/End: Complemental strand, 34692532 - 34692359
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| ||||   || ||| | |||||||||||   ||| |||||||||||| ||   |||||     
T  34692532 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaa---ctttta 34692436  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    |||||||||||   ||||| |||  |||| |||||||| |||||||| ||||||||| |||||||  ||||||||||    
T  34692435 aataaataattatagttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 34692359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 227
Target Start/End: Original strand, 31169763 - 31169916
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||| ||||||  ||||||||| |  ||| || |  ||| |||  |||||||||||||  ||||||||||||||| ||     |||||    
T  31169763 gtttttctatcatgtgtaaatttgcacatgttaacaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatatgtagg---ttttt 31169859  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    ||||| |||||  || ||||||| |||||||||||| ||||||| | ||||||||||    
T  31169860 aataattaattattggttttcaaagaaaaattactatttttagtagccttaacatgt 31169916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 30623415 - 30623331
Alignment:
Q  163 aactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    ||||||| |||||||||||| ||||||||||  |||| |||||||| |||||||| |||||||||  ||||||  ||||||||||    
T  30623415 aacttttgaataaataattgttgtttttcaagaaaaagttactactattagttgttttaacatgtgtaatgttgcacatgttaga 30623331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 72 - 160
Target Start/End: Complemental strand, 31503919 - 31503831
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    ||||||||  ||||||||||||  ||||||||| |  ||| || |  ||||||||| ||||||||||||| ||||||||||||||||||    
T  31503919 tttttctaatatgtgcaaatttgcacatgttaagaaatttaaagtagtaagtttatattggaacttgtgtattttatattaaatatata 31503831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 232
Target Start/End: Original strand, 29863302 - 29863460
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| ||||  |||  || | | ||||||| ||  ||||||||||| |||| ||   ||||||    
T  29863302 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaaaattgtgtcggaacttttgcattttatattaactataaaa---cttttt 29863398  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||||||||  | |||||||||| ||| |||||| ||||||||   ||||||||| ||||    
T  29863399 aataaataattattctttttcaatgtaaagttactatttttagttcctttaacatgtgcaat 29863460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 1017850 - 1017919
Alignment:
Q  143 ttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagtt 215  Q
    ||||||||||||||| |||    ||||||||||||||||| || ||||||| ||||| |||||||||||||||    
T  1017850 ttttatattaaatatgtaaa---tttttaataaataattgttggttttcaacgaaaagttactacttttagtt 1017919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 8977467 - 8977624
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||||||||||||| ||||||  || |||||| |  ||  ||||  ||| ||| | ||| ||||||||  ||||||||||||||| |||   ||||| |    
T  8977467 tttttctatcatgtgtaaatttgcacttgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaa---cttttca 8977563  T
Q  172 ataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||| |||| ||||||||||| |||  || ||||||||||||  |||||||||| ||||    
T  8977564 ataaatgattgttgtttttcaattaaaggttgctacttttagtttccttaacatgtgcaat 8977624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 26602522 - 26602588
Alignment:
Q  166 tttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||||||| |||||| || |||||| ||||||||||||||||||||||  ||||| |||| ||||    
T  26602522 tttttaataattaattgttggttttcagtgaaaaattactacttttagtttccttaatatgtgcaat 26602588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 3850637 - 3850577
Alignment:
Q  167 ttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    ||||||| |||||||  || ||||||||||||| || ||||||||||||| ||||||||||    
T  3850637 ttttaatgaataattattgattttcaatgaaaagttgctacttttagttgccttaacatgt 3850577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 212
Target Start/End: Complemental strand, 29730383 - 29730318
Alignment:
Q  144 tttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactactttta 212  Q
    ||||||||||||||||||   ||||||||||||||| || ||||||||||| |||| ||| || |||||    
T  29730383 tttatattaaatatataa---ctttttaataaataactgttgtttttcaataaaaacttattaatttta 29730318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 4371929 - 4371856
Alignment:
Q  163 aactttttaataaataattgatgtttttcaatgaaa-aattactacttttagttgtcttaacatgtccaatgtt 235  Q
    ||||||| |||||||||||| |||||| |||  ||| ||||| |||| |||||||| ||||||||| |||||||    
T  4371929 aacttttgaataaataattgttgttttccaaaaaaataattattactattagttgttttaacatgtacaatgtt 4371856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 34733749 - 34733790
Alignment:
Q  119 taagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||    
T  34733749 taagtttatattggaacttgtgtattttacattaaatatata 34733790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 2086949 - 2086993
Alignment:
Q  188 tttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||||||||||||||||||||||| ||  |||||||||| ||||    
T  2086949 tttcaatgaaaaattactacttttaattaccttaacatgtgcaat 2086993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 212
Target Start/End: Complemental strand, 17154793 - 17154662
Alignment:
Q  79 atcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttttaataaata 178  Q
    ||||| || ||||||  |||||||||||  ||| |||| ||| |||| | ||| ||||||||| || |||||||||| ||||||   |||||||||| |     
T  17154793 atcatttgtaaatttacacatgttaaaaaatttaaaataataggtttgttttgaaacttgtgtattctatattaaatgtataat---tttttaataattg 17154697  T
Q  179 attgatgtttttcaat-gaaaaattactactttta 212  Q
    |||  |||||||||||  |||||||| ||||||||    
T  17154696 attattgtttttcaataaaaaaattaatactttta 17154662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 17596369 - 17596333
Alignment:
Q  196 aaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  17596369 aaaagttactacttttagttgtcttaacatgtgcaat 17596333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 28757573 - 28757644
Alignment:
Q  161 ataactttttaataaataattgatgtttttcaatgaaaaatt-actacttttagttgtcttaacatgtccaat 232  Q
    |||||||||||||||||||||||| ||||||||| |||| || | |||||||| |||  ||||||||| ||||    
T  28757573 ataactttttaataaataattgat-tttttcaataaaaacttaaatacttttaattgctttaacatgtgcaat 28757644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 238
Target Start/End: Original strand, 32615552 - 32615626
Alignment:
Q  167 ttttaataaataattgatgtttttcaatgaaaaattac---tacttttagttgtcttaacatgtccaatgttaca 238  Q
    ||||||| ||||||||||| ||||||||||||| ||||   |||||||||||  |||||||| | |||| |||||    
T  32615552 ttttaatcaataattgatgattttcaatgaaaagttactagtacttttagttaccttaacatatgcaatattaca 32615626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 71 - 245
Target Start/End: Original strand, 37114 - 37287
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || |||||| |||  |||||||||||||  ||| ||||||||||| ||    ||||||    
T  37114 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtgataactttgacttggaacttgtgcatttcatattaaatatgtag---cttttt 37210  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    ||||||||| |  ||||||||||| |||||||||||||||||| | ||||||||||| |||||||  ||||||||||    
T  37211 aataaataagttttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttaga 37287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 7e-28; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 9516758 - 9516628
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||||||||||||| ||||||  ||||||||| |  ||| ||||| ||||||| ||||  ||||||||| |||||||||||||||   |||||||||||    
T  9516758 tttttctatcatgtgtaaatttgcacatgttaagaaatttaaaatggtaagtttctcttataacttgtgtattttatattaaatat---ataacttttta 9516662  T
Q  172 ataaataattgatgtttttcaatgaaaaattact 205  Q
    ||||||||||| |||||||||||||||| |||||    
T  9516661 ataaataattggtgtttttcaatgaaaagttact 9516628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 71 - 245
Target Start/End: Complemental strand, 30172057 - 30171884
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || || ||| |||  |||||||||||||  ||| ||||||||||| ||    ||||||    
T  30172057 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatgtag---cttttt 30171961  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    ||||||||| |  ||||||||||| |||||||||||||||||| ||||||||||||| |||||||  ||||||||||    
T  30171960 aataaataagttttgtttttcaataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttaga 30171884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 71 - 245
Target Start/End: Complemental strand, 30187598 - 30187425
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || || ||| |||  |||||||||||||  ||| ||||||||||| ||    ||||||    
T  30187598 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatgtag---cttttt 30187502  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    ||||||||| |  ||||||||||| |||||||||||||||||| ||||||||||||| |||||||  ||||||||||    
T  30187501 aataaataagttttgtttttcaataaaaaattactacttttagatgtcttaacatgtgcaatgttgcacatgttaga 30187425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 267
Target Start/End: Complemental strand, 34802145 - 34801951
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| ||||| ||| ||| ||| ||||||||||  ||| ||||||||||| || |   |||||    
T  34802145 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatggtaattttgtct-ggaacttgtgcatttcatattaaatatgtagt---ttttt 34802050  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttagagaaagcctaattttattagcaa 267  Q
    ||||||||| |  ||||||||||| |||||||||||||||||| | ||||||||||| |||||||  |||||||||| ||| ||| | || ||||||||    
T  34802049 aataaataagttttgtttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttagacaaacccttaattaattagcaa 34801951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 35438892 - 35438762
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||||||||||||||||||||  ||||||||| |  ||| ||||| ||||||||||||  || |||||| |||||||||||||||   |||||||||||    
T  35438892 tttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatggtaagtttatcttataatttgtgtattttatattaaatat---ataacttttta 35438796  T
Q  172 ataaataattgatgtttttcaatgaaaaattact 205  Q
    ||||| ||||| ||||||||||| |||| |||||    
T  35438795 ataaacaattggtgtttttcaattaaaagttact 35438762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 313927 - 313770
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || |  ||| |||| |||||||||||||| ||||||||||||||| |    |  ||||    
T  313927 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgt----agctttt 313832  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||| |||||||| || |||||||| ||||||||||||||||||||  |||||||||| ||||    
T  313831 aatcaataattgttggttttcaatcaaaaattactacttttagttaccttaacatgtgcaat 313770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 70 - 245
Target Start/End: Complemental strand, 23591877 - 23591703
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||||||||||||||||||||||  ||||||||| |  |||||||| | || |||   |||||||||||   |||| ||||||||||||||   |||||    
T  23591877 agtttttctatcatgtgcaaatttgcacatgttaagaaattttaaataacaactttgcattggaacttgtacattttgtattaaatatataa---ctttt 23591781  T
Q  170 taataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    ||||||||||||  || |||||||| |||| |||||| |||||||||  ||||||||| |||||||  ||||||||||    
T  23591780 taataaataattattgattttcaataaaaacttactaattttagttgctttaacatgtgcaatgttgcacatgttaga 23591703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 232
Target Start/End: Original strand, 39150327 - 39150484
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||| ||| |  ||| || |  ||| |||  ||||||| |||||| ||||||||||||||| |||     ||||    
T  39150327 gtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatatgtaa----ctttt 39150422  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||||||||| || ||||||||||||| |||||||||||||||| |||||||||| ||||    
T  39150423 aataaataattgttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaat 39150484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 17919631 - 17919474
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||  ||| |  ||| || |  ||| |||  ||||||| |||||| ||||||||||||||| |||     ||||    
T  17919631 gtttttctatcatgtgcaaatttgcacataataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatatgtaa----ctttt 17919536  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||||||||| || ||||||||||||| |||||||||||||||| |||||||||| ||||    
T  17919535 aataaataattgttggttttcaatgaaaagttactacttttagttgccttaacatgtacaat 17919474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 72 - 199
Target Start/End: Complemental strand, 13241934 - 13241810
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||||||||||||| ||||||  ||||||||| |  ||| ||||| ||||||| || || ||||||||| ||| ||||||||||||||||   ||||||    
T  13241934 tttttctatcatgtgaaaatttgcacatgttaagaaatttaaaatggtaagtttgtcgtgtaacttgtgtatttcatattaaatatataat---ttttta 13241838  T
Q  172 ataaataattgatgtttttcaatgaaaa 199  Q
    ||||||||||  |||||||||| |||||    
T  13241837 ataaataatttgtgtttttcaacgaaaa 13241810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 36490957 - 36490799
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||| ||||||||  ||||||||| |  ||| ||||  ||| |||   |||||||||||   |||| |||| |||||||||   ||||||    
T  36490957 gtttttctatcatgagcaaatttgcacatgttaagaagtttaaaatagtaactttgcattggaacttgtacattttgtatttaatatataa---cttttt 36490861  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||||||||| ||||||||||| |||| |||||||||||| |||  ||||||||| ||||    
T  36490860 aataaataattgttgtttttcaataaaaacttactacttttaattgctttaacatgtgcaat 36490799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 206
Target Start/End: Original strand, 30288864 - 30288995
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || |  ||| |||| |||||||||||||| ||||||||||||||| |    |  ||||    
T  30288864 gtttttctatcatgtgcaaatttacacatgttaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgt----agctttt 30288959  T
Q  171 aataaataattgatgtttttcaatgaaaaattacta 206  Q
    ||| |||||||| || ||||||||||||||||||||    
T  30288960 aatcaataattgttggttttcaatgaaaaattacta 30288995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 70 - 238
Target Start/End: Original strand, 51920430 - 51920595
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||||||||||||||||||||||  ||||||||| |  ||| ||||   || ||||| ||  || |||| | ||| |||||||||||| ||   |||||    
T  51920430 agtttttctatcatgtgcaaatttgcacatgttaataaatttaaaatagaaattttatattaaaatttgtatatttaatattaaatataaaa---ctttt 51920526  T
Q  170 taataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgttaca 238  Q
     |||||||||||| ||||||||||  ||||||||||||| ||| |||| |||||||||  |||||||||    
T  51920527 gaataaataattgttgtttttcaaaaaaaaattactactattaattgttttaacatgtataatgttaca 51920595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 44918202 - 44918045
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || |  ||| ||||  ||||||||| ||| ||||||||||||||| ||      ||||    
T  44918202 gtttttctatcatgtgcaaatttacacatgttaagaaatttaaagtagtaactttaatttggaacttatgttttttatattaaatatgtagc----tttt 44918107  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||| |||||||| || |||||||| |||| |||||||||||||||  |||||||||| ||||    
T  44918106 aatcaataattgttgattttcaataaaaatttactacttttagttaccttaacatgtgcaat 44918045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 210
Target Start/End: Original strand, 6569985 - 6570120
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || |  ||| |||| |||||||||||||| ||||||||||||||| |    |  ||||    
T  6569985 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgt----agctttt 6570080  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttt 210  Q
    ||| |||||||| || ||||||||||||| ||| ||||||    
T  6570081 aatcaataattgttggttttcaatgaaaagttagtacttt 6570120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 227
Target Start/End: Original strand, 30362995 - 30363148
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||| ||| |  ||| ||||  ||| |||  |||||||||||||  |||||||||||||||    ||  |||||    
T  30362995 gtttttctatcatgtgcaaatttgcacatgataacaaatttaaaatagtaactttgacttggaacttgtgcattttatattaaatat---gtaggttttt 30363091  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    ||||| |||||| || |||||||| |||| |||||| ||||||| | ||||||||||    
T  30363092 aataattaattgttggttttcaataaaaagttactatttttagtagccttaacatgt 30363148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 161
Target Start/End: Complemental strand, 43909368 - 43909281
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataa 161  Q
    ||||||||||||||||||||||  ||||  |||||  ||||||||| ||||||| ||||  ||||||||| |||||||||||||||||||    
T  43909368 tttttctatcatgtgcaaatttgcacat--taaaaaattttaaatggtaagtttgtcttataacttgtgtattttatattaaatatataa 43909281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 245
Target Start/End: Complemental strand, 6180364 - 6180191
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| ||||   || ||||| |||||||||||   ||| |||||||||||   | |||||||     
T  6180364 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgtacatttaatattaaatat---aaaactttta 6180268  T
Q  171 aataaataattgatgtttttcaatgaaaaa-ttactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    ||||||||||| ||  ||||| | |||||| |||||||| |||||||| ||||||||| |||||||  ||||||||||    
T  6180267 aataaataatt-ataattttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 6180191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 143 - 232
Target Start/End: Complemental strand, 8062310 - 8062225
Alignment:
Q  143 ttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||||||||||||||| |    ||||||| |||||||| || ||||||||||||| |||||||||||||||  |||||||||| ||||    
T  8062310 ttttatattaaatatatagt----ttttaatcaataattgttgattttcaatgaaaagttactacttttagttaccttaacatgttcaat 8062225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 19277878 - 19277815
Alignment:
Q  162 taactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacat 225  Q
    ||||||||||||||||||||| ||||||||||| |||| |||||||| || ||||| |||||||    
T  19277878 taactttttaataaataattgttgtttttcaataaaaacttactactctttgttgttttaacat 19277815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 235
Target Start/End: Complemental strand, 22167513 - 22167352
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    ||||| |||||||||||||||||  ||||| ||| |  ||| ||||   || ||| | |||||||||||   ||| |||||||||||| | |   ||||     
T  22167513 gttttcctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttgtattggaacttgtacatttaatattaaatataaatt---ttttg 22167417  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt 235  Q
    |||||||||||| ||||||||||  |||| |||||||| |||||||| ||||||||| |||||||    
T  22167416 aataaataattgttgtttttcaagaaaaagttactactattagttgttttaacatgtgcaatgtt 22167352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 235
Target Start/End: Complemental strand, 38812918 - 38812757
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||  ||||   || ||||| ||| |||||||   ||| |||||||||||| ||   |||||     
T  38812918 gtttttctatcatgtgcaaatttgcacatgttaagaagttcaaaatagaaattttatattgaaacttgtacatttaatattaaatataaaa---cttttg 38812822  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt 235  Q
    |||||||||||| ||||||  ||  |||| |||||||| |||||||| ||||||||| |||||||    
T  38812821 aataaataattgttgttttctaagaaaaagttactactattagttgttttaacatgtacaatgtt 38812757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 21854208 - 21854269
Alignment:
Q  165 ctttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatg 226  Q
    ||||| ||||||||| || ||||||||||| |||||||||||||||||| | ||||||||||    
T  21854208 cttttaaataaataaatgttgtttttcaattaaaaattactacttttagatatcttaacatg 21854269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 31101024 - 31101079
Alignment:
Q  165 ctttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtctta 221  Q
    ||||||||||||||| || |||||||||||| ||||||||||||||||| |||||||    
T  31101024 ctttttaataaataagtgttgtttttcaatg-aaaattactacttttagatgtctta 31101079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 217
Target Start/End: Original strand, 2222235 - 2222377
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgtttt-atattaaatatataataacttt 168  Q
    ||||||||||||||||| ||||||  ||||||||| |  |||  ||| |||| ||||||||  ||||||||| || | ||||||||||  ||    ||||    
T  2222235 agtttttctatcatgtgaaaatttacacatgttaagaaattt--aataataactttatcttaaaacttgtgtattatgatattaaatagttag---cttt 2222329  T
Q  169 ttaataaataattgatgtttttcaatgaaaaattactacttttagttgt 217  Q
    |||||||||||||  ||||||||||| |||| |||||||||||||||||    
T  2222330 ttaataaataattattgtttttcaat-aaaagttactacttttagttgt 2222377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 245
Target Start/End: Complemental strand, 35512903 - 35512730
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| ||||   || ||||| ||||||||||    ||| |||||||||||   | |||||||     
T  35512903 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattggaacttgcacatttaatattaaatat---aaaacttttg 35512807  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    |||| |||| || |||||| |||  |||| |||||||| |||||||| ||||||| | |||||||  ||||||||||    
T  35512806 aatatataaatgttgttttccaagaaaaagttactactattagttgttttaacatttgcaatgttgcacatgttaga 35512730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 51382450 - 51382368
Alignment:
Q  174 aaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttagagaaagccta 254  Q
    ||||||||| || ||||||||||||| |||||||||||||||  |||||||||| |||| ||  |||||||||| ||| ||||    
T  51382450 aaataattgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaacccta 51382368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 161
Target Start/End: Complemental strand, 20357444 - 20357358
Alignment:
Q  75 ttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataa 161  Q
    ||||||||||| |||||||  |||||||||||| ||| | ||  ||||||| | || |||||||||| ||||| |||||||||||||    
T  20357444 ttctatcatgtacaaatttacacatgttaaaatatttaagatagtaagtttgttttagaacttgtgtattttacattaaatatataa 20357358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 20562511 - 20562597
Alignment:
Q  75 ttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataa 161  Q
    ||||||||||| |||||||  |||||||||||| ||| | ||  ||||||| | || |||||||||| ||||| |||||||||||||    
T  20562511 ttctatcatgtacaaatttacacatgttaaaatatttaagatagtaagtttgttttagaacttgtgtattttacattaaatatataa 20562597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 245
Target Start/End: Original strand, 7824947 - 7825031
Alignment:
Q  163 aactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    ||||||| ||||||||||||  ||||| |||  |||| |||||||| |||||||| ||||||||| |||||||  ||||||||||    
T  7824947 aacttttgaataaataattgtggttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 7825031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 39930892 - 39930941
Alignment:
Q  166 tttttaataaataattgatgtttttcaatgaaaaattactacttttagtt 215  Q
    ||||||||||||||||  |  |||||||||||||||||||||||||||||    
T  39930892 tttttaataaataattatttgttttcaatgaaaaattactacttttagtt 39930941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 49195719 - 49195647
Alignment:
Q  144 tttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaa--ttactacttttagttg 216  Q
    |||||||||||||||||||   |||||| |||||||||  ||||||||||| |||||  ||||||||||||||||    
T  49195719 tttatattaaatatataatt--tttttagtaaataatttgtgtttttcaattaaaaaatttactacttttagttg 49195647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 4249384 - 4249293
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataat 162  Q
    ||||||||| ||||||||||||   ||||||||| |  ||| || |  ||||||||| ||| ||||||||| ||||| ||||||||||||||    
T  4249384 gtttttctaacatgtgcaaattcgcacatgttaataagtttaaagttttaagtttatattgaaacttgtgtattttacattaaatatataat 4249293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 4249708 - 4249617
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataat 162  Q
    ||||||||| ||||||||||||   ||||||||| |  ||| || |  ||||||||| ||| ||||||||| ||||| ||||||||||||||    
T  4249708 gtttttctaacatgtgcaaattcgcacatgttaataagtttaaagttttaagtttatattgaaacttgtgtattttacattaaatatataat 4249617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 4250032 - 4249941
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataat 162  Q
    ||||||||| ||||||||||||   ||||||||| |  ||| || |  ||||||||| ||| ||||||||| ||||| ||||||||||||||    
T  4250032 gtttttctaacatgtgcaaattcgcacatgttaataagtttaaagttttaagtttatattgaaacttgtgtattttacattaaatatataat 4249941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 281068 - 281030
Alignment:
Q  167 ttttaataaataattgatgtttttcaatgaaaaattact 205  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  281068 ttttaataaacaattggtgtttttcaatgaaaaattact 281030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 23378574 - 23378655
Alignment:
Q  143 ttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacat 225  Q
    ||||||||||||||||   ||||||||||| ||||||||| |  |||||||| |||| ||| || |||||||||| |||||||    
T  23378574 ttttatattaaatatagtgtaactttttaacaaataattg-ttattttcaataaaaagttattaattttagttgttttaacat 23378655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 212
Target Start/End: Original strand, 11744917 - 11744966
Alignment:
Q  163 aactttttaataaataattgatgtttttcaatgaaaaattactactttta 212  Q
    |||||||||||||||||||| ||||||||||| |||| ||  ||||||||    
T  11744917 aactttttaataaataattgttgtttttcaataaaaagtttatactttta 11744966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 245
Target Start/End: Complemental strand, 22331704 - 22331628
Alignment:
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    |||||||||||| ||||||||||  |||| |||||||| |||| | | ||||||||| |||||||  ||||||||||    
T  22331704 aataaataattgttgtttttcaagaaaaagttactactattagatattttaacatgtgcaatgttgcacatgttaga 22331628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 23808523 - 23808440
Alignment:
Q  163 aactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgt--tacatgttaga 245  Q
    ||||||| ||||||||| || |||||| ||| |||||||||||||| | |||| | ||||||||| ||||||  |||||||||||    
T  23808523 aacttttgaataaataaatgttgttttccaa-gaaaaattactactatcagttattttaacatgtgcaatgttgtacatgttaga 23808440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 42589302 - 42589261
Alignment:
Q  119 taagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||    
T  42589302 taagtttatattggaacttgtgtattttacattaaatatata 42589261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 44013055 - 44013014
Alignment:
Q  119 taagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||    
T  44013055 taagtttatattggaacttgtgtattttacattaaatatata 44013014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 30109095 - 30109147
Alignment:
Q  163 aactttttaataaataattgatgtttttcaatgaaaaattactacttttagtt 215  Q
    |||||||||||||||||||| |||||||  ||  |||||| ||||||||||||    
T  30109095 aactttttaataaataattgttgttttttcatataaaattgctacttttagtt 30109147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 232
Target Start/End: Original strand, 32716223 - 32716320
Alignment:
Q  131 ggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtcca 230  Q
    ||||||||||| ||||||||||||||| ||| |    |||||| |||||||| |  ||||||| ||||| ||||| | |||||||  |||||||||| ||    
T  32716223 ggaacttgtgttttttatattaaatatgtaaca----tttaatcaataattgtttgttttcaacgaaaagttacttcatttagttaccttaacatgtgca 32716318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 39627633 - 39627724
Alignment:
Q  133 aacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    ||||||||  ||||||||||||||| |||   ||||| ||||| | |||| ||||||||||| |||| || ||| ||||||||  ||||||||||    
T  39627633 aacttgtgcattttatattaaatatgtaa---cttttcaataagtgattgttgtttttcaattaaaagttgctatttttagtttccttaacatgt 39627724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 50467431 - 50467493
Alignment:
Q  117 gataagtttatcttggaacttgtgtgttttatattaaatatataataactttttaataaataatt 181  Q
    ||||||||| ||||| ||||| ||| |||||||||||| |||| |||| ||||||||||||||||    
T  50467431 gataagtttgtcttgaaacttatgtattttatattaaa-atat-ataattttttaataaataatt 50467493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 61; Significance: 4e-26; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 71 - 232
Target Start/End: Original strand, 27665044 - 27665201
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||| ||| |  ||| || |  ||| |||  |||||||||||||| ||||||||||||||| |||     ||||    
T  27665044 gtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaa----ctttt 27665139  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||||||||| || ||||||||||||| |||||||||||||||| |||||||||| ||||    
T  27665140 aataaataattgttggttttcaatgaaaagttactacttttagttgccttaacatgtgcaat 27665201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 232
Target Start/End: Original strand, 16126559 - 16126716
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || |  ||| |||| |||| ||||||||| ||||||||||||||| ||      ||||    
T  16126559 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatatgtagc----tttt 16126654  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||| |||||||| || |||||||||||||||||||||||||||||  |||||||||| ||||    
T  16126655 aatcaataattgttggttttcaatgaaaaattactacttttagttaccttaacatgtgcaat 16126716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 224
Target Start/End: Complemental strand, 36731358 - 36731208
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||| ||||||  ||||||||| |  ||| ||||| ||| ||| |||| |||||||||| || ||||||||||| |||||   |||||    
T  36731358 gtttttctatcatgtgtaaatttacacatgttaagaaatttaaaatggtaaatttgtcttagaacttgtgtattctatattaaatagataat--tttttt 36731261  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaaca 224  Q
    ||| |||||||  |||||||||||||||| ||||||| ||||||| ||||||||    
T  36731260 aat-aataattagtgtttttcaatgaaaagttactacatttagttttcttaaca 36731208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 73 - 232
Target Start/End: Complemental strand, 19228601 - 19228446
Alignment:
Q  73 ttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttttaa 172  Q
    |||||||||||||||||||||  ||||||||| |  ||| || |  ||| |||  |||||||||||||| |||| |||||||||| |||     ||||||    
T  19228601 ttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaa----cttttaa 19228506  T
Q  173 taaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    | |||||||| || ||||||||||||| |||||||||||||||  |||||||||| ||||    
T  19228505 tcaataattgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaat 19228446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 232
Target Start/End: Original strand, 15411624 - 15411780
Alignment:
Q  73 ttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttttaa 172  Q
    ||||||| |||||||||||||  ||||||||| |  ||| ||||  ||| ||| ||||| |||||||   ||||||||||||||| ||    ||||||||    
T  15411624 ttttctaacatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaatatgtag---ctttttaa 15411720  T
Q  173 taaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||| |||| ||||||||||| ||||||||||||||||||||   ||||||||| ||||    
T  15411721 taaattattgttgtttttcaataaaaaattactacttttagttactttaacatgtgcaat 15411780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 12016844 - 12016687
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  |||| |||| |  ||| || |  ||| |||| |||||||||||||| ||||||||||||||| |    |  ||||    
T  12016844 gtttttctatcatgtgcaaatttgcacatattaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgt----agctttt 12016749  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||| |||||||| || |||||||| |||| |||||||||||||||  |||||||||| ||||    
T  12016748 aatcaataattgttggttttcaataaaaagttactacttttagttaccttaacatgtgcaat 12016687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 70 - 232
Target Start/End: Original strand, 20566016 - 20566175
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||||||||||||||||||||||  ||||||||| |  ||| || |  || |||| | ||||||||||||| |||| ||||||||| ||||||   |||    
T  20566016 agtttttctatcatgtgcaaatttacacatgttaagaagtttaaagtattatgtttgtattggaacttgtgtattttttattaaatagataata---ttt 20566112  T
Q  170 taataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||||||||||| ||||||||||| || | || ||| ||||||||   ||||||||| ||||    
T  20566113 taataaataattgttgtttttcaataaatagttgctatttttagttactttaacatgtgcaat 20566175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 215
Target Start/End: Complemental strand, 9747495 - 9747354
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||| ||||||||| |  ||| ||||  ||| ||| |||||||||||||   |||||||||||||||    || ||||||    
T  9747495 gtttttctatcatgtgcaaattttcacatgttaagaagtttaaaatagtaattttgtcttggaacttgttcattttatattaaatat---gtagcttttt 9747399  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagtt 215  Q
     | ||||| ||| ||||||||||| || | |||||||||||||||    
T  9747398 tacaaatagttgttgtttttcaataaatagttactacttttagtt 9747354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 73 - 232
Target Start/End: Complemental strand, 14377600 - 14377445
Alignment:
Q  73 ttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttttaa 172  Q
    |||||||||||||||||||||  ||||| ||| |  ||| || |  ||| |||  |||| ||||||||| ||||||||||||||| |||     ||||||    
T  14377600 ttttctatcatgtgcaaatttgtacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtaa----cttttaa 14377505  T
Q  173 taaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
     ||||||||| || |||||||| |||| |||||||||||||||| |||||||||| ||||    
T  14377504 caaataattgttggttttcaataaaaagttactacttttagttgccttaacatgtgcaat 14377445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 70 - 225
Target Start/End: Complemental strand, 45062377 - 45062225
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||||||||||||||||||||||  |||| |||| |  ||  ||||  ||| ||||| ||||||||||||  |||||||||||| || |||   |||||    
T  45062377 agtttttctatcatgtgcaaatttgcacatattaagaagttcaaaatagtaactttattttggaacttgtgcattttatattaaacatgtaa---ctttt 45062281  T
Q  170 taataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacat 225  Q
    ||||||||||||  ||||||| ||| |||| |||| ||||||| |||| |||||||    
T  45062280 taataaataatttttgttttttaataaaaagttaccacttttaattgttttaacat 45062225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 216
Target Start/End: Original strand, 2060044 - 2060184
Alignment:
Q  73 ttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttttaa 172  Q
    |||||||| ||||||||||||  ||||||||| |  ||| || |  ||| |||| ||||||| |||||| |||||||||||||||    || || |||||    
T  2060044 ttttctatgatgtgcaaatttacacatgttaagaaatttaaagtagtaactttaacttggaatttgtgtcttttatattaaatat---gtagctctttaa 2060140  T
Q  173 taaataattgatgtttttcaatgaaaaattactacttttagttg 216  Q
    |||||||||| || |||| |||||||| ||| ||||||||||||    
T  2060141 taaataattgttgatttttaatgaaaagttattacttttagttg 2060184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 7720204 - 7720120
Alignment:
Q  163 aactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    ||||||| |||||||||||| ||||||||||  |||| |||||||| |||||||| ||||||||| |||||||  ||||||||||    
T  7720204 aacttttgaataaataattgttgtttttcaaaaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 7720120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 194
Target Start/End: Complemental strand, 9450435 - 9450315
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    ||||||||||||||||||||| |  ||||||||| |  ||| || |  || |||| | |||||| |||||| |||| |||||||||||||||   |||||    
T  9450435 gtttttctatcatgtgcaaatctgcacatgttaagaaatttaaagtagtatgtttgtattggaatttgtgtattttctattaaatatataat---ttttt 9450339  T
Q  171 aataaataattgatgtttttcaat 194  Q
    |||||||||||| |||||||||||    
T  9450338 aataaataattgttgtttttcaat 9450315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 123 - 232
Target Start/End: Complemental strand, 22705580 - 22705475
Alignment:
Q  123 tttatcttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaa 222  Q
    |||| |||| ||||||||| ||||||||||||||| |||     ||| ||| |||||||| || ||||||||||||| |||||||||||||||  |||||    
T  22705580 tttaacttgaaacttgtgttttttatattaaatatgtaac----tttaaattaataattgttggttttcaatgaaaagttactacttttagttaccttaa 22705485  T
Q  223 catgtccaat 232  Q
    ||||| ||||    
T  22705484 catgtgcaat 22705475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 232
Target Start/End: Original strand, 12919351 - 12919509
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||| ||||||||||||||||  |||||||||||  ||| ||||  ||| ||||||||| |||||||   ||||||||||||||| || |   ||||||    
T  12919351 tttttttatcatgtgcaaatttacacatgttaaaaaatttaaaatagtaactttatcttgaaacttgttcattttatattaaatatgtagt---ttttta 12919447  T
Q  172 ataaataattgatgtttttcaat-gaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||| |||| |  ||||||||  |||||||| |||||||| |||  ||||||||| ||||    
T  12919448 ataaattattgctacttttcaataaaaaaattaatacttttaattgctttaacatgtgcaat 12919509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 232
Target Start/End: Original strand, 16919153 - 16919311
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||| ||||||||||||||||||  |||| |||| |  ||| || |  ||| |||  |||| ||||||||| ||||||||||||||| |||     |||    
T  16919153 agtttatctatcatgtgcaaatttgcacatattaacaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtaa----cttt 16919248  T
Q  170 taataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||| |||||||| || |||||||  |||| |||||||||||||||  |||||||||| ||||    
T  16919249 taatcaataattgttggttttcaacaaaaagttactacttttagttaccttaacatgtgcaat 16919311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 39904140 - 39904205
Alignment:
Q  167 ttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||||| |||||||| || ||||||||||||| |||||||||||||||  |||||||||| ||||    
T  39904140 ttttaatcaataattgttgattttcaatgaaaagttactacttttagttaccttaacatgtgcaat 39904205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 143 - 225
Target Start/End: Complemental strand, 2051720 - 2051641
Alignment:
Q  143 ttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacat 225  Q
    ||||||||||||||| |||    ||||||||||||||||| ||||||||||| |||| || ||| |||||||||| |||||||    
T  2051720 ttttatattaaatatttaaa---tttttaataaataattgttgtttttcaataaaaacttgctaattttagttgttttaacat 2051641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 70 - 232
Target Start/End: Complemental strand, 23932744 - 23932585
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||||||||||||||||||||||  | || |||| |  ||| ||||  |||  || | | ||||||||||  ||||||||||| |||| ||   |||||    
T  23932744 agtttttctatcatgtgcaaatttgcatatattaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataaaa---ctttt 23932648  T
Q  170 taataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||||||||||| | |||||||||| ||| |||||| ||||||||   ||||||||| ||||    
T  23932647 taataaataattgttctttttcaatgtaaagttactatttttagttcctttaacatgtgcaat 23932585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 72 - 227
Target Start/End: Original strand, 34213950 - 34214104
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    |||||||||| |||||||||||  ||||||||| |  ||| ||||  ||| |||   ||||||||||    |||| ||||||| ||||| ||||||||||    
T  34213950 tttttctatcgtgtgcaaatttgcacatgttaagaaatttaaaatagtaatttttcattggaacttgaacattttttattaaaaatata-taacttttta 34214048  T
Q  172 ataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
      ||||||||| || |||||||| |||| |||||| |||||||||  |||||||||    
T  34214049 taaaataattgttggttttcaataaaaacttactatttttagttgctttaacatgt 34214104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 165 - 216
Target Start/End: Original strand, 43388857 - 43388908
Alignment:
Q  165 ctttttaataaataattgatgtttttcaatgaaaaattactacttttagttg 216  Q
    |||||||||||||||||| || |||||||| ||||||| |||||||||||||    
T  43388857 ctttttaataaataattgttgattttcaataaaaaatttctacttttagttg 43388908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 245
Target Start/End: Complemental strand, 43806538 - 43806365
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    ||||||||||| |||| ||||||  |||||||||||  ||| ||||   || ||| | ||| |||||||   ||| |||||||||||| ||   |||||     
T  43806538 gtttttctatcgtgtgtaaatttgcacatgttaaaaagtttaaaatagaaattttgtattgaaacttgtacatttaatattaaatataaaa---cttttg 43806442  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    |||||||||||| |||||| |||  |||| |||||||| ||| |||| ||||||||| |||||||  ||||||||||    
T  43806441 aataaataattgttgttttccaagaaaaagttactactattaattgttttaacatgtgcaatgttgcacatgttaga 43806365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 10690868 - 10690803
Alignment:
Q  167 ttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||||| |||||||| || |||| ||||||||||||||| ||||||||  |||||||||| ||||    
T  10690868 ttttaatcaataattgttggtttttaatgaaaaattactaattttagttaacttaacatgtgcaat 10690803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 29157829 - 29157918
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    |||||||||||||||||||||||  ||||||||| |  ||||||||  ||| |||   ||||||||||| | |||| |||||||||||||    
T  29157829 gtttttctatcatgtgcaaatttgcacatgttaagaaattttaaatagtaactttgcattggaacttgtatattttgtattaaatatata 29157918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 22162169 - 22162234
Alignment:
Q  166 tttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||||||| |||||| || ||| |||| |||| |||||||||||||||| |||||||||| ||||    
T  22162169 tttttaataattaattgttggttt-caataaaaagttactacttttagttgccttaacatgtgcaat 22162234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 3286625 - 3286584
Alignment:
Q  119 taagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||    
T  3286625 taagtttatattggaacttgtgtattttacattaaatatata 3286584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 11660977 - 11661060
Alignment:
Q  129 ttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttg 216  Q
    ||||||||||| | |||| |||||||| |||||   |||||||||||||||||| | || |||||| |||| || |||||||||||||    
T  11660977 ttggaacttgtatattttgtattaaatgtataa---ctttttaataaataattg-ttttattcaataaaaatttgctacttttagttg 11661060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 25068539 - 25068603
Alignment:
Q  136 ttgtgtgttttatattaaatatata-ataactttttaataaataattgatgtttttcaatgaaaaa 200  Q
    |||||| |||||||||||||| ||| |||| ||||||||||||||||| | ||||||||| |||||    
T  25068539 ttgtgtattttatattaaataaatatataattttttaataaataattg-tttttttcaataaaaaa 25068603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 26229946 - 26230010
Alignment:
Q  167 ttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||||| |||||||| || |||| ||| ||||||||||||||||||||  |||||||||| ||||    
T  26229946 ttttaatcaataattgttggtttt-aataaaaaattactacttttagttaccttaacatgtgcaat 26230010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 43941902 - 43941943
Alignment:
Q  119 taagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||    
T  43941902 taagtttatattggaacttgtgtattttacattaaatatata 43941943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 4579889 - 4579941
Alignment:
Q  175 aataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    |||||||| |||||||||||||||| ||||||  |||||||  ||||||||||    
T  4579889 aataattggtgtttttcaatgaaaagttactatatttagtttccttaacatgt 4579941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 123 - 181
Target Start/End: Complemental strand, 35729243 - 35729188
Alignment:
Q  123 tttatcttggaacttgtgtgttttatattaaatatataataactttttaataaataatt 181  Q
    ||||| ||||||||||||| ||||||| |||||||   |||| ||||||||||||||||    
T  35729243 tttatattggaacttgtgtattttatagtaaatat---ataaatttttaataaataatt 35729188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 113 - 227
Target Start/End: Complemental strand, 34249814 - 34249702
Alignment:
Q  113 aaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactactttta 212  Q
    ||||| ||||||| ||||||||||||||| ||||||||||||||| |||    ||||||||||||||||  |||||||||||||||||||| ||||||||    
T  34249814 aaatggtaagtttgtcttggaacttgtgtattttatattaaatatttaact--tttttaataaataattagtgtttttcaatgaaaaattaatactttta 34249717  T
Q  213 gttgtcttaacatgt 227  Q
    | ||||||| |||||    
T  34249716 gctgtcttatcatgt 34249702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 73 - 216
Target Start/End: Complemental strand, 20514809 - 20514669
Alignment:
Q  73 ttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttttaa 172  Q
    |||||||||||||||| ||||  ||| ||||| |  ||| ||||| ||||||| |||||||||||||   |||||||||||||||   ||||||||||||    
T  20514809 ttttctatcatgtgcatatttgcacaggttaagaaatttaaaatggtaagtttgtcttggaacttgtacattttatattaaatat---ataactttttaa 20514713  T
Q  173 taaataattgatgtttttcaatgaaaaattactacttttagttg 216  Q
    |||||||||| | ||||||||| | ||||||||||||| |||||    
T  20514712 taaataattggtatttttcaataagaaattactactttaagttg 20514669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 10129281 - 10129124
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || |  ||| |||| |||||||||||||| ||||||||||||||| |    |  ||||    
T  10129281 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgt----agctttt 10129186  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||| |||||||| || |||||||||||||||||||| ||||||||  |||||||||| ||||    
T  10129185 aatcaataattgttggttttcaatgaaaaattactaattttagttaccttaacatgtgcaat 10129124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 71 - 245
Target Start/End: Complemental strand, 31812291 - 31812118
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  |||| |||| |  ||| ||||| ||| |||  |||||||||||||  ||| ||||||||||| ||    ||||||    
T  31812291 gtttttctatcatgtgcaaatttgcacatattaagaagtttaaaatggtaattttgacttggaacttgtgcatttcatattaaatatgtag---cttttt 31812195  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    ||||||||| |  | ||||||||| |||||||||||||||||| | ||||||||||| |||||||  ||||||||||    
T  31812194 aataaataagttttatttttcaataaaaaattactacttttagatatcttaacatgtgcaatgttgcacatgttaga 31812118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 9743982 - 9743888
Alignment:
Q  128 cttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatg 226  Q
    |||||||||| ||| ||||||||||||||| |||     |||||||||||||||| || |||||||| |||||||||||||||||||||||||||||||    
T  9743982 cttggaacttatgttttttatattaaatatgtaa----cttttaataaataattgttggttttcaataaaaaattactacttttagttgtcttaacatg 9743888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 232
Target Start/End: Original strand, 7140459 - 7140616
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  |||| |||| |  ||| || |  ||| |||| |||||||||||||| ||||||||||||||| |    | |||||    
T  7140459 gtttttctatcatgtgcaaatttgcacatattaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgt----agttttt 7140554  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||| |||||||| || |||||||| |||| |||||||||||||||  |||||||||| ||||    
T  7140555 aatcaataattgttggttttcaataaaaagttactacttttagttaccttaacatgtgcaat 7140616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 73 - 205
Target Start/End: Original strand, 7393247 - 7393375
Alignment:
Q  73 ttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttttaa 172  Q
    |||| |||||||||| |||||  |||||||||||  ||| ||||  ||| ||| ||||| ||||||||| |||||||||||||||||||   ||||||||    
T  7393247 ttttttatcatgtgcgaatttgcacatgttaaaaaatttaaaatagtaa-tttgtcttgtaacttgtgtattttatattaaatatataa---ctttttaa 7393342  T
Q  173 taaataattgatgtttttcaatgaaaaattact 205  Q
    |||||||||| |||||||||| |||||| ||||    
T  7393343 taaataattggtgtttttcaacgaaaaactact 7393375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 235
Target Start/End: Complemental strand, 26834739 - 26834578
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  | || |||| |  ||| ||||| ||| |||  |||||||||||||  ||| ||||||||||| ||    ||||||    
T  26834739 gtttttctatcatgtgcaaatttgcatatattaagaaatttaaaatggtaattttgacttggaacttgtgcatttcatattaaatatgtag---cttttt 26834643  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt 235  Q
    ||||||||| |  ||||||||||| |||||||||||||||||| | ||||| ||||| |||||||    
T  26834642 aataaataagttttgtttttcaataaaaaattactacttttagatatcttagcatgtgcaatgtt 26834578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 258
Target Start/End: Complemental strand, 26682246 - 26682060
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || |  ||| |||  |||||||||||||  ||||||||||||| | ||    ||||||    
T  26682246 gtttttctatcatgtgcaaatttgcacatgttaagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatgtgtag---cttttt 26682150  T
Q  171 aataaataattgatgtttttcaatgaaaaa-ttactacttttagttgtcttaacatgtccaatgtt--acatgttagagaaagcctaattt 258  Q
    |||||||||||| |||||| |||| ||||| ||||||||||||||||| ||||||||| |||| ||  |||||||||| |||  |||||||    
T  26682149 aataaataattgttgtttt-caataaaaaaattactacttttagttgttttaacatgtgcaatattgcacatgttagacaaactctaattt 26682060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 72 - 225
Target Start/End: Original strand, 13327942 - 13328091
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||||||||||||||||||||  ||||||||| |  ||| || |  ||| |||  |||| ||||||||| ||||||||||||||| ||| |    ||||    
T  13327942 tttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatatgtaaca----ttta 13328037  T
Q  172 ataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacat 225  Q
    || |||||||| || ||||||||||||| |||||||||||||||  ||||||||    
T  13328038 atcaataattgttggttttcaatgaaaagttactacttttagttaccttaacat 13328091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 8140653 - 8140593
Alignment:
Q  167 ttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    |||||||||||||||| || ||||||||||||||| |||||||||||||| ||||||||||    
T  8140653 ttttaataaataattgttggttttcaatgaaaaatcactacttttagttgccttaacatgt 8140593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 71 - 245
Target Start/End: Complemental strand, 12132161 - 12131988
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    ||||||||||||| |||||| ||  ||||||||| |  ||| || |  ||||||| | ||||||||||    |||||||||||||||||||   ||||||    
T  12132161 gtttttctatcatctgcaaacttgcacatgttaagaaatttaaagtagtaagtttgtattggaacttgaacattttatattaaatatataa---cttttt 12132065  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    |||||||| |||  |||||||||| |||| || ||||||||||||   ||||||||| |||||||  ||||||||||    
T  12132064 aataaatacttgtggtttttcaataaaaagttgctacttttagtttctttaacatgtgcaatgttgcacatgttaga 12131988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 161 - 236
Target Start/End: Complemental strand, 37264592 - 37264517
Alignment:
Q  161 ataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtta 236  Q
    |||||||||||||||||||||  || |||||||| | || ||||||||||||||||| ||||||||| ||||||||    
T  37264592 ataactttttaataaataattattgattttcaataacaatttactacttttagttgttttaacatgtgcaatgtta 37264517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 215
Target Start/End: Complemental strand, 6818195 - 6818054
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| ||||  |||  || | | ||||||||||  ||||||||||| |||| ||   ||||||    
T  6818195 gtttttctatcatgtgcaaatttgtacatgttaagaagtttaaaatagtaaaattgtatcggaacttgtgcattttatattaactataaaa---cttttt 6818099  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagtt 215  Q
    |||||||||||| | |||||||||| ||| |||||| ||||||||    
T  6818098 aataaataattgttctttttcaatgtaaagttactatttttagtt 6818054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 232
Target Start/End: Original strand, 8284568 - 8284727
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || |   || ||   |||||||||||||| ||||||||||||||  |  |  ||||||    
T  8284568 gtttttctatcatgtgcaaatttgtacatgttaagaagtttaaattagcaacttcgacttggaacttgtgtattttatattaaataggtggt--cttttt 8284665  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||||||||| | ||||| ||| |||| ||||||||||||||||  ||||||||| ||||    
T  8284666 aataaataattgttcttttttaataaaaagttactacttttagttgctttaacatgtgcaat 8284727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 223
Target Start/End: Original strand, 34741666 - 34741813
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    |||||||||||| || ||||||   ||||||||||  ||| |||| |||||||| | || |||||||||  ||||||||||||||||||||   ||||||    
T  34741666 tttttctatcatatgtaaatttgttcatgttaaaaagtttaaaataataagtttgtattagaacttgtgcattttatattaaatatataat---ttttta 34741762  T
Q  172 ataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaac 223  Q
    |||||||||| ||  |||||||| |||| ||  || |||||||||| |||||    
T  34741763 ataaataatt-attgttttcaattaaaagttgttatttttagttgttttaac 34741813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 255
Target Start/End: Complemental strand, 38843882 - 38843699
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||| ||||||  ||||| ||| |  ||| ||||   || ||| | |||||||||||   ||| |||||||||||| ||   |||||     
T  38843882 gtttttctatcatgtgtaaatttgcacatgctaagaagtttaaaatataaattttttattggaacttgtacatttaatattaaatataaaa---cttttg 38843786  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttagagaaagcctaa 255  Q
    |||||||||||| |||||| |||  |||| |||||||| |||||||| ||||||||| |||||||  |||||||||| ||| |||||    
T  38843785 aataaataattgttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttagacaaaccctaa 38843699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 12189588 - 12189747
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||| ||| |  ||| ||||   || ||||| |||||||||||   ||| |||||||||||| | |   ||||     
T  12189588 gtttttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatataaatt---ttttg 12189684  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatg 233  Q
    |||||||||||| ||||||||||  |||| ||| |||| |||||||| ||||||||| |||||    
T  12189685 aataaataattgttgtttttcaagaaaaagttaatactcttagttgttttaacatgtgcaatg 12189747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 233
Target Start/End: Original strand, 12434016 - 12434175
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||| ||| |  ||| ||||   || ||||| |||||||||||   ||| |||||||||||| | |   ||||     
T  12434016 gtttttctatcatgtgcaaatttgcacatgataagaagtttaaaatagaaactttatattggaacttgtacatttaatattaaatataaatt---ttttg 12434112  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatg 233  Q
    |||||||||||| ||||||||||  |||| ||| |||| |||||||| ||||||||| |||||    
T  12434113 aataaataattgttgtttttcaagaaaaagttaatactcttagttgttttaacatgtgcaatg 12434175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 212
Target Start/End: Original strand, 18567416 - 18567553
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || |  ||| |||  |||||||| ||||| ||||||||||||||| ||| |    |||    
T  18567416 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttggaacatgtgttttttatattaaatatgtaaca----ttt 18567511  T
Q  171 aataaataattgatgtttttcaatgaaaaattactactttta 212  Q
    ||| |||||||| || ||||||||||||| |||| |||||||    
T  18567512 aatcaataattgttggttttcaatgaaaagttaccactttta 18567553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 215
Target Start/End: Original strand, 38047940 - 38048078
Alignment:
Q  73 ttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttttaa 172  Q
    |||| ||| ||||||||||||  |||||||||  |  |||||||| ||| ||| |||||||| |||||| |||||| ||||||||| | |   |||||||    
T  38047940 ttttttattatgtgcaaatttgcacatgttaag-taatttaaatggtaactttgtcttggaatttgtgtattttatcttaaatatacatt---tttttaa 38048035  T
Q  173 taaataattgatgtttttcaatgaaaaattactacttttagtt 215  Q
    |||||||||| ||||| | |||||||| |||||| ||||||||    
T  38048036 taaataattggtgtttgtgaatgaaaagttactatttttagtt 38048078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 232
Target Start/End: Original strand, 39701803 - 39701960
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || |  ||| |||  |||| || |||||| ||||||||||||||| |||     ||||    
T  39701803 gtttttctatcatgtgcaaatttgcacatgttaacaagtttaaagtagtaactttgacttgaaatttgtgttttttatattaaatatgtaa----ctttt 39701898  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||| | |||||| || ||||||| ||||| |||||||||||||||  |||||||||| ||||    
T  39701899 aattagtaattgttggttttcaacgaaaagttactacttttagttaccttaacatgtgcaat 39701960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 207
Target Start/End: Complemental strand, 29642781 - 29642648
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgtttt-atattaaatatataataactttt 169  Q
    |||||||||||||||||||||||  | ||| |||    ||| ||||| ||||||| ||||| ||||||||| |||| |||||||||| | ||   |||||    
T  29642781 gtttttctatcatgtgcaaatttgcatatgataaggaatttaaaatggtaagtttgtcttgaaacttgtgtttttttatattaaatagacaa---ctttt 29642685  T
Q  170 taataaataattgatgtttttcaatgaaaaattactac 207  Q
    |||||| |||||| |||||||||||||||| |||||||    
T  29642684 taataa-taattggtgtttttcaatgaaaagttactac 29642648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 199
Target Start/End: Complemental strand, 31133961 - 31133889
Alignment:
Q  123 tttatcttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaa 199  Q
    ||||||||| ||| ||||| ||||||||||||||||    |||||||||||||||||||  ||||||||||||||||    
T  31133961 tttatcttgaaacctgtgtattttatattaaatata----aactttttaataaataatttgtgtttttcaatgaaaa 31133889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 254
Target Start/End: Original strand, 36967159 - 36967252
Alignment:
Q  163 aactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttagagaaagccta 254  Q
    ||||||| |||| ||||||| |||||| |||  |||| |||||||| |||||||||||||||||| |||||||  |||||||||| ||| ||||    
T  36967159 aacttttgaatatataattgttgttttccaagaaaaagttactactattagttgtcttaacatgtacaatgttgcacatgttagacaaacccta 36967252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 45006059 - 45005975
Alignment:
Q  163 aactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    ||||||| |||||||||||| |||||| |||  |||| |||||||| |||||||| ||||||||| |||||||  ||||||||||    
T  45006059 aacttttgaataaataattgttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 45005975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 71 - 212
Target Start/End: Complemental strand, 9801846 - 9801709
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    ||||||| |||||||||||||||  ||||||||| |  ||| || |  ||| |||  |||| ||||| ||| | |||||||||||||||||     ||||    
T  9801846 gtttttcaatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttgaaacttatgtttgttatattaaatatataac----tttt 9801751  T
Q  171 aataaataattgatgtttttcaatgaaaaattactactttta 212  Q
    ||| |||||||| || ||||||||||||| ||||||||||||    
T  9801750 aatcaataattgttgattttcaatgaaaagttactactttta 9801709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 232
Target Start/End: Original strand, 35678275 - 35678432
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||| ||||||||||||||||  ||||| ||| |  ||| || |  ||| |||  |||| ||||||||| ||| ||||||||||| |||    |||||    
T  35678275 gtttttttatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgtattt-atattaaatatgtaaa---ttttt 35678370  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||| |||||| || ||||||||||||| |||||||||||||||   ||||||||| ||||    
T  35678371 aataattaattgttggttttcaatgaaaagttactacttttagtttctttaacatgtgcaat 35678432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 26195495 - 26195533
Alignment:
Q  162 taactttttaataaataattgatgtttttcaatgaaaaa 200  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  26195495 taactttttaataaataattgatgtttttcaataaaaaa 26195533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 9580201 - 9580270
Alignment:
Q  166 tttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt 235  Q
    |||| |||||||||||| |||||| |||  |||| |||||||| |||||||| ||||||||| |||||||    
T  9580201 ttttgaataaataattgttgttttccaagaaaaagttactactattagttgttttaacatgtgcaatgtt 9580270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 232
Target Start/End: Complemental strand, 38527902 - 38527841
Alignment:
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||||||| | || ||||||||||||| ||| |||||||||||| |||||||||| ||||    
T  38527902 aataaataatcgttggttttcaatgaaaagttattacttttagttgccttaacatgtgcaat 38527841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 225
Target Start/End: Complemental strand, 9825054 - 9824986
Alignment:
Q  157 tataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacat 225  Q
    |||| ||||||||| |||||| |||||||||||||||| |||| |||||| ||||| |||  |||||||    
T  9825054 tatattaacttttttataaattattgatgtttttcaataaaaagttactaattttaattgcattaacat 9824986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 10974626 - 10974705
Alignment:
Q  143 ttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacat 225  Q
    ||||||||||||||| ||||   ||||||||||||| ||  ||||||||||| |||  ||||||||||||||||  |||||||    
T  10974626 ttttatattaaatatgtaat---tttttaataaatagttattgtttttcaataaaatgttactacttttagttgctttaacat 10974705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 225
Target Start/End: Original strand, 40210886 - 40210971
Alignment:
Q  136 ttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacat 225  Q
    |||||| ||||||||||||||| ||| |    |||||| |||||||| || ||||||||||||| ||| |||||||||||  ||||||||    
T  40210886 ttgtgttttttatattaaatatgtaaca----tttaatcaataattgttggttttcaatgaaaagttaatacttttagttaccttaacat 40210971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 6850669 - 6850720
Alignment:
Q  166 tttttaataaataattgatgtttttcaatgaaaaattactacttttagttgt 217  Q
    |||| |||||||||||| ||||||||||| |||| |||||||| ||||||||    
T  6850669 ttttgaataaataattgttgtttttcaataaaaagttactactattagttgt 6850720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 71 - 232
Target Start/End: Original strand, 14816126 - 14816283
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||| ||| |  ||| || |  ||| |||  |||  ||||||||| ||| ||||||||||| |||    |||||    
T  14816126 gtttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgtgtattt-atattaaatatgtaaa---ttttt 14816221  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||| |||||| || |||||||| |||| |||||||||||||||   ||||||||| ||||    
T  14816222 aataattaattgttggttttcaataaaaagttactacttttagtttctttaacatgtgcaat 14816283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 14829614 - 14829457
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||| ||| |  ||| || |  ||| |||  |||  ||||||||| ||| ||||||||||| |||    |||||    
T  14829614 gtttttctatcatgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgtgtattt-atattaaatatgtaaa---ttttt 14829519  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||| |||||| || |||||||| |||| |||||||||||||||   ||||||||| ||||    
T  14829518 aataattaattgttggttttcaataaaaagttactacttttagtttctttaacatgtgcaat 14829457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 238
Target Start/End: Original strand, 16445824 - 16445899
Alignment:
Q  163 aactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgttaca 238  Q
    ||||||| |||||||||||| |||||| |||  |||| |||||||| |||||||| ||||||| |  |||||||||    
T  16445824 aacttttgaataaataattgttgttttccaagaaaaagttactactattagttgttttaacatatgtaatgttaca 16445899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 225
Target Start/End: Complemental strand, 44091404 - 44091346
Alignment:
Q  166 tttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacat 225  Q
    ||||||||||||||||| || |||||||| |||||||| ||||||| ||||| |||||||    
T  44091404 tttttaataaataattgttg-ttttcaataaaaaattaatacttttcgttgttttaacat 44091346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 5573379 - 5573313
Alignment:
Q  161 ataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    ||||||||||||||||| |||| ||||||||||| |||| ||  || |||||||| | |||||||||    
T  5573379 ataactttttaataaatgattgttgtttttcaataaaaacttgttatttttagttattttaacatgt 5573313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 12346097 - 12346031
Alignment:
Q  161 ataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    |||| |||| |||||||||||| ||||||||||  |||| |||||||| ||| |||| |||||||||    
T  12346097 ataagttttgaataaataattgttgtttttcaagaaaaagttactactattaattgttttaacatgt 12346031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 10543677 - 10543718
Alignment:
Q  119 taagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||    
T  10543677 taagtttatattggaacttgtgtattttacattaaatatata 10543718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 182
Target Start/End: Original strand, 14961663 - 14961771
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||| ||| |  ||| ||||  ||| ||| | ||||||||||||  ||||| |||||||||    |||||||||    
T  14961663 gtttttctatcatgtgcaaatttgcacatgctaagaagtttaaaatagtaattttgtattggaacttgtgcattttaaattaaatat---ttaacttttt 14961759  T
Q  171 aataaataattg 182  Q
    ||||||| ||||    
T  14961760 aataaatgattg 14961771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 15198900 - 15198945
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaat 116  Q
    |||||||||||||||||||||||  |||||||||||  ||||||||    
T  15198900 gtttttctatcatgtgcaaatttgcacatgttaaaaaattttaaat 15198945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 19343937 - 19343994
Alignment:
Q  175 aataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||||| || ||||||||||||| ||||||||||| |||  |||||||||| ||||    
T  19343937 aataattgttggttttcaatgaaaagttactacttttggttaccttaacatgtgcaat 19343994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 4080485 - 4080557
Alignment:
Q  166 tttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgttaca 238  Q
    |||||| ||| |||||| |  ||||||||||||| |||||||||||| ||  |||||||||| |||| |||||    
T  4080485 tttttagtaattaattgttagttttcaatgaaaagttactacttttactttccttaacatgtgcaatattaca 4080557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 4084634 - 4084706
Alignment:
Q  166 tttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgttaca 238  Q
    |||||| ||| |||||| |  ||||||||||||| |||||||||||| ||  |||||||||| |||| |||||    
T  4084634 tttttagtaattaattgttagttttcaatgaaaagttactacttttactttccttaacatgtgcaatattaca 4084706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 4102941 - 4103013
Alignment:
Q  166 tttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgttaca 238  Q
    |||||| ||| |||||| |  ||||||||||||| |||||||||||| ||  |||||||||| |||| |||||    
T  4102941 tttttagtaattaattgttagttttcaatgaaaagttactacttttactttccttaacatgtgcaatattaca 4103013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 13496820 - 13496868
Alignment:
Q  163 aactttttaataaataattgatgtttttcaatgaaaaattactactttt 211  Q
    |||||||||||||||||||| | |||||||||| ||| |||||| ||||    
T  13496820 aactttttaataaataattgttctttttcaatgtaaagttactattttt 13496868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 34869611 - 34869683
Alignment:
Q  163 aactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt 235  Q
    ||||||| |||||||||||| ||||||| ||  |||| |||||| | |||||||| |||||| || |||||||    
T  34869611 aacttttgaataaataattgttgtttttgaagaaaaagttactattattagttgttttaacacgtgcaatgtt 34869683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 71 - 254
Target Start/End: Original strand, 52779 - 52960
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || |  ||| |||  |||||||||||||| |||| |||||||||| |||     ||||    
T  52779 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaa----ctttt 52874  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttagagaaagccta 254  Q
    ||| |||||||| || ||||||||||||| |||||||||||||||  |||||||||| |||| ||  |||||||||| ||| ||||    
T  52875 aatcaataattgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaacccta 52960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 71 - 254
Target Start/End: Complemental strand, 145855 - 145674
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || |  ||| |||  |||||||||||||| |||| |||||||||| |||     ||||    
T  145855 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaa----ctttt 145760  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttagagaaagccta 254  Q
    ||| |||||||| || ||||||||||||| |||||||||||||||  |||||||||| |||| ||  |||||||||| ||| ||||    
T  145759 aatcaataattgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaatattgcacatgttagacaaacccta 145674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 7e-22; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 70 - 232
Target Start/End: Original strand, 12641992 - 12642150
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||||||||| ||||||||||||  ||||||||| |  ||| || | |||| |||   ||||||||||||| ||||||||||||||| ||| |    ||    
T  12641992 agtttttctataatgtgcaaatttgcacatgttaagaagtttaaattaataactttgatttggaacttgtgttttttatattaaatatgtaaca----tt 12642087  T
Q  170 taataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||   ||||||| || |||||||||||||||||||||||||||||| |||||||||| ||||    
T  12642088 taaacgataattgttggttttcaatgaaaaattactacttttagttgccttaacatgtacaat 12642150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 2795701 - 2795544
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || |  ||| |||  |||||||||||||| |||| |||||||||| |||     ||||    
T  2795701 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaa----ctttt 2795606  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||| |||||||| || ||||||||||||| |||||||||||||||  |||||||||| ||||    
T  2795605 aatcaataattgttggttttcaatgaaaagttactacttttagttaccttaacatgtgcaat 2795544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 70 - 224
Target Start/End: Original strand, 32019983 - 32020134
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||||||||||||||||||||||  ||||||||| |  ||| ||||| ||||||| ||||||||||||||| || |||||||||||    |||||||||    
T  32019983 agtttttctatcatgtgcaaatttgcacatgttaagaaatttaaaatggtaagtttgtcttggaacttgtgtattctatattaaata---gataactttt 32020079  T
Q  170 taataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaaca 224  Q
    | |  |||||| | |||||||||| ||||| ||||||  |||||||  |||||||    
T  32020080 ttaataataatcggtgtttttcaaagaaaagttactagatttagtttccttaaca 32020134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 225
Target Start/End: Complemental strand, 4047590 - 4047440
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| || |  ||| |||| |||||||||||||| ||||||||||||||| |    |  ||||    
T  4047590 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgt----agctttt 4047495  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacat 225  Q
    ||| || ||||| || ||||||||||||| |||||||||||||||  ||||||||    
T  4047494 aatcaacaattgttggttttcaatgaaaagttactacttttagttaccttaacat 4047440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 113 - 238
Target Start/End: Original strand, 10665007 - 10665128
Alignment:
Q  113 aaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactactttta 212  Q
    ||||| ||||||| ||||||||||||||| ||  ||||||||| |||||   ||||||||||||||||| || |||| ||||||||| ||| ||||||||    
T  10665007 aaatggtaagtttgtcttggaacttgtgtattgcatattaaatttataa---ctttttaataaataattaatatttt-caatgaaaagttattactttta 10665102  T
Q  213 gttgtcttaacatgtccaatgttaca 238  Q
    |||  |||||||||| |||| |||||    
T  10665103 gttaccttaacatgtgcaatattaca 10665128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 70 - 215
Target Start/End: Original strand, 15240949 - 15241091
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||||||||||||||||||||||  |||||||||||  ||  ||||  ||| ||| | ||| || |||||  | ||||||||||||||||||   ||||    
T  15240949 agtttttctatcatgtgcaaatttgtacatgttaaaaagttcaaaatattaaatttgtattgaaatttgtgcatgttatattaaatatataat---tttt 15241045  T
Q  170 taataaataattgatgtttttcaatgaaaaattactacttttagtt 215  Q
    ||||||||||||| |||||||||||||||   ||||| ||||||||    
T  15241046 taataaataattgttgtttttcaatgaaatgatactatttttagtt 15241091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 123 - 238
Target Start/End: Complemental strand, 9184333 - 9184222
Alignment:
Q  123 tttatcttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaa 222  Q
    |||| |||||||||||||| ||||||||||||||| || |    ||||||| |||||||  || ||||||||||||| |||||||||||||||  |||||    
T  9184333 tttaacttggaacttgtgttttttatattaaatatgtagt----ttttaatcaataattattggttttcaatgaaaagttactacttttagttaccttaa 9184238  T
Q  223 catgtccaatgttaca 238  Q
    ||||| |||| |||||    
T  9184237 catgtgcaatattaca 9184222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 225
Target Start/End: Complemental strand, 6863734 - 6863584
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  |||||||||||  ||| ||||  ||| ||||| ||||||||||    |||| ||||||||||   ||||||||||    
T  6863734 gtttttctatcatgtgcaaatttgcacatgttaaaaaatttaaaatagtaactttatattggaacttgaacattttgtattaaatat---ataacttttt 6863638  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacat 225  Q
    | |||||||||| ||  ||||||| |||| || ||||||||||||  ||||||||    
T  6863637 attaaataattgttg-gtttcaataaaaacttgctacttttagttaccttaacat 6863584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 123 - 232
Target Start/End: Original strand, 30328379 - 30328484
Alignment:
Q  123 tttatcttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaa 222  Q
    |||| |||||||||||||| ||||||||||||||| ||      ||||||| |||||||| || |||| |||||||||| ||||||||||||| ||||||    
T  30328379 tttaacttggaacttgtgttttttatattaaatatgtagc----ttttaatcaataattgttggtttttaatgaaaaatgactacttttagttatcttaa 30328474  T
Q  223 catgtccaat 232  Q
    ||||| ||||    
T  30328475 catgtgcaat 30328484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 227
Target Start/End: Complemental strand, 34578188 - 34578037
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||| ||||||||||||||||  |||||||||||  ||| ||||  ||| |||| |||  ||||||| | ||||||||||||||| ||      |||||    
T  34578188 tttttttatcatgtgcaaatttgcacatgttaaaaagtttaaaatagtaactttaacttaaaacttgtattttttatattaaatatgtagc----tttta 34578093  T
Q  172 ataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgt 227  Q
    || || ||||| || ||||||||||||||||| |||||||||||  ||||||||||    
T  34578092 atcaacaattgttgattttcaatgaaaaattattacttttagttaccttaacatgt 34578037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 238
Target Start/End: Original strand, 13515926 - 13516089
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||| ||||||  ||||||||| |  ||| || ||  |||||||||||| ||||| | | || ||||||||||| |||||   |||||    
T  13515926 gtttttctatcatgtgtaaatttgcacatgttaacaaatttaaagtggaaagtttatcttgaaacttatatattctatattaaatagataat---ttttt 13516022  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgttaca 238  Q
    ||| |||||||||| |||| ||||| ||| || |||| |||||||  |||||||||| |||| |||||    
T  13516023 aat-aataattgatattttccaatgcaaagttgctacatttagtttccttaacatgtgcaatattaca 13516089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 70 - 254
Target Start/End: Original strand, 31365949 - 31366133
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||||||||||||||||||||||  ||||||||| |  ||| || |  ||| |||  |||||||||||||| ||||||||||||||| ||| |    ||    
T  31365949 agtttttctatcatgtgcaaatttgtacatgttaagaagtttaaattagtaactttgacttggaacttgtgttttttatattaaatatgtaaca----tt 31366044  T
Q  170 taataaataattgatgtttttcaatgaaaaa--ttactacttttagttgtcttaacatgtccaatgtt--acatgttagagaaagccta 254  Q
    |||| |||||||| || |||||||| |||||  ||||||| ||||| |  |||||||||| |||| ||  |||||||||| ||| ||||    
T  31366045 taatcaataattgttggttttcaataaaaaaagttactacatttagctaccttaacatgtgcaatattgcacatgttagacaaacccta 31366133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 72 - 232
Target Start/End: Complemental strand, 33072856 - 33072697
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||||||| || | |||||||  |||||||||||  ||| ||||| | | ||| |||| |||||| ||| |||||| ||||||||   ||| ||||| |    
T  33072856 tttttctattatctacaaatttgcacatgttaaaaaatttaaaatgttgattttgtcttagaacttctgtattttatgttaaatat---atagcttttca 33072760  T
Q  172 ataaataattgatgtttttcaat--gaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||||||||||||| |||||||   ||||| |||||||||||||||  ||||||||| ||||    
T  33072759 ataaataattgatgtctttcaataaaaaaaagtactacttttagttgatttaacatgtgcaat 33072697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 70 - 215
Target Start/End: Complemental strand, 35469733 - 35469590
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||||||||||||||| ||||||  |||||||||||  ||| ||||  |||| || | |||||||| || | |||||||||||||||   |||||||||    
T  35469733 agtttttctatcatgtgtaaatttgcacatgttaaaaaatttaaaatagtaagcttttattggaactagtttattttatattaaatat---ataactttt 35469637  T
Q  170 taataaataattgatgtttttcaat-gaaaaattactacttttagtt 215  Q
    |  ||| | |||| |||||||||||  ||||||| ||||||||||||    
T  35469636 tcttaattgattgttgtttttcaataaaaaaattgctacttttagtt 35469590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 245
Target Start/End: Complemental strand, 3398398 - 3398225
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| ||||   || ||| | |||||||||||   ||| |||||||||||| ||   |||||     
T  3398398 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagaaattttgtattggaacttgtacatttaatattaaatataaaa---ctttta 3398302  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    |||||||||||   ||||| |||  |||| |||||||| |||||||| ||||||||| |||||||  ||||||||||    
T  3398301 aataaataattatagttttccaagaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 3398225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 5958215 - 5958264
Alignment:
Q  166 tttttaataaataattgatgtttttcaatgaaaaattactacttttagtt 215  Q
    |||||||||| |||||| || |||||||||||||||||||||||||||||    
T  5958215 tttttaataattaattgttgattttcaatgaaaaattactacttttagtt 5958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 11376045 - 11375980
Alignment:
Q  167 ttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||||||||||||  || ||||||||||||| ||||||||||||||||  ||||||||| ||||    
T  11376045 ttttaataaataattattgattttcaatgaaaagttactacttttagttgctttaacatgtgcaat 11375980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 14466495 - 14466580
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatat 157  Q
    |||||||||||||||||||||| |||||||||| |  ||| || |  ||| |||| |||| ||||||||| |||||||||||||||    
T  14466495 tttttctatcatgtgcaaatttagacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatat 14466580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 245
Target Start/End: Original strand, 18841794 - 18841878
Alignment:
Q  163 aactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    ||||||| |||||||||||| |||||| |||  |||| |||||||| |||||||| ||||||||| |||||||  ||||||||||    
T  18841794 aacttttgaataaataattgttgttttccaaaaaaaagttactactattagttgttttaacatgtgcaatgttgcacatgttaga 18841878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 24329726 - 24329787
Alignment:
Q  165 ctttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatg 226  Q
    ||||| ||||||||| || ||||||||||| |||||||||||||||||| | ||||||||||    
T  24329726 cttttaaataaataaatgttgtttttcaattaaaaattactacttttagatatcttaacatg 24329787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 28629993 - 28629899
Alignment:
Q  134 acttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    |||||||| ||||||||||||||| |||     |||||||||||||||| || ||||||||||||| ||| || |||||||||  ||||||||| ||||    
T  28629993 acttgtgttttttatattaaatatgtaa----cttttaataaataattgttggttttcaatgaaaagttattatttttagttgctttaacatgtgcaat 28629899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 235
Target Start/End: Original strand, 40309499 - 40309590
Alignment:
Q  143 ttttatattaaatatataataactttttaataaataattg--atgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt 235  Q
    |||||||||||||||||||   ||||||||||||| ||||  || ||||||||| ||| |||  ||||||||||||| ||||||||| |||||||    
T  40309499 ttttatattaaatatataa---ctttttaataaattattgttatttttttcaataaaatattgttacttttagttgttttaacatgttcaatgtt 40309590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 215
Target Start/End: Original strand, 31567493 - 31567632
Alignment:
Q  73 ttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttttaa 172  Q
    ||||||||||| |||||||||  |||||||||||  ||| ||||| ||| ||| ||||| || ||||   ||||||||||||||| || |   |||||||    
T  31567493 ttttctatcatatgcaaatttgcacatgttaaaaaatttaaaatggtaattttgtcttgaaatttgttcattttatattaaatatgtagt---tttttaa 31567589  T
Q  173 taaataattgatgtttttcaatgaaaaattactacttttagtt 215  Q
    | |||||||  ||||||||||| |||| |||||  ||||||||    
T  31567590 tgaataattattgtttttcaataaaaagttactctttttagtt 31567632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 232
Target Start/End: Complemental strand, 11636909 - 11636752
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||| ||| |  ||| || |  ||| |||  |||| ||||||||  ||| ||||||||||| |||    |||||    
T  11636909 gtttttctatcatgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgcattt-atattaaatatgtaaa---ttttt 11636814  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaat 232  Q
    ||||| |||||| || ||||||||||||| |||||||||||||||   ||||||||| ||||    
T  11636813 aataattaattgttggttttcaatgaaaagttactacttttagtttctttaacatgtgcaat 11636752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 11692690 - 11692749
Alignment:
Q  133 aacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaat 194  Q
    ||||||||| ||||||| ||| |||||||  || ||||||||||||||||||||||||||||    
T  11692690 aacttgtgtattttataataattatataa--accttttaataaataattgatgtttttcaat 11692749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 41350379 - 41350244
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||| ||||||||||||||||  ||||||||| |  ||| || |  ||| |||  |||||||||||||  ||||||||||||||| |||     |||||    
T  41350379 tttttttatcatgtgcaaatttgcacatgttaagaagtttaaagtagtaattttgacttggaacttgtgctttttatattaaatatgtaa----ctttta 41350284  T
Q  172 ataaataattgatgtttttcaatgaaaaattactactttt 211  Q
    ||||||||||| || |||||| || ||||||| |||||||    
T  41350283 ataaataattgttgattttcagtgcaaaattaatactttt 41350244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 16174713 - 16174762
Alignment:
Q  166 tttttaataaataattgatgtttttcaatgaaaaattactacttttagtt 215  Q
    |||||||||| |||||| || ||||||||||||| |||||||||||||||    
T  16174713 tttttaataattaattgttggttttcaatgaaaagttactacttttagtt 16174762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 163 - 245
Target Start/End: Original strand, 26376658 - 26376742
Alignment:
Q  163 aactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt--acatgttaga 245  Q
    ||||||| |||||||||||| |||||| |||  |||| |||||||| ||| |||| ||||||||| |||||||  ||||||||||    
T  26376658 aacttttgaataaataattgttgttttccaagaaaaagttactactattatttgttttaacatgtacaatgttgcacatgttaga 26376742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 179
Target Start/End: Original strand, 23995416 - 23995523
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||| ||||||||||||  ||||||||| |  ||| ||||  ||| ||||| ||| |||||||   |||| |||||||||||| ||||||||||    
T  23995416 gtttttctattatgtgcaaatttgtacatgttaagaagtttaaaatagtaattttatattgaaacttgtacattttgtattaaatatat-ataacttttt 23995514  T
Q  171 aataaataa 179  Q
    ||| |||||    
T  23995515 aattaataa 23995523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 15190958 - 15190900
Alignment:
Q  167 ttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacat 225  Q
    ||||||| |||||||| |  |||||||||||||||||||||||||| ||  ||||||||    
T  15190958 ttttaatcaataattgtttgttttcaatgaaaaattactacttttacttaccttaacat 15190900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 12332467 - 12332426
Alignment:
Q  119 taagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||    
T  12332467 taagtttatattggaacttgtgtattttacattaaatatata 12332426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 13761800 - 13761759
Alignment:
Q  119 taagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||    
T  13761800 taagtttatattggaacttgtgtattttacattaaatatata 13761759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 31613197 - 31613238
Alignment:
Q  119 taagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||    
T  31613197 taagtttatattggaacttgtgtattttacattaaatatata 31613238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 31705059 - 31705018
Alignment:
Q  119 taagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||    
T  31705059 taagtttatattggaacttgtgtattttacattaaatatata 31705018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 158
Target Start/End: Original strand, 39990038 - 39990124
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatata 158  Q
    ||||||| ||||||||| |||| |  ||||||||||| |||  |||| |||||||| ||||| ||||||||  |||| |||||||||||    
T  39990038 agtttttttatcatgtgtaaatgtgcacatgttaaaagttt--aaataataagtttgtcttgaaacttgtgcattttctattaaatata 39990124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 40454191 - 40454150
Alignment:
Q  119 taagtttatcttggaacttgtgtgttttatattaaatatata 160  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||    
T  40454191 taagtttatattggaacttgtgtattttacattaaatatata 40454150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 3737965 - 3738036
Alignment:
Q  163 aactttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt 235  Q
    ||||||| |||||||||||| |||||| | |  |||| |||||||| |||||||| ||||||||| |||||||    
T  3737965 aacttttgaataaataattgttgttttccga-aaaaagttactactattagttgttttaacatgtgcaatgtt 3738036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 26265133 - 26265208
Alignment:
Q  163 aactttttaataaataattgatgtttttc--aatgaaaaattactacttttagttgtcttaacatgtccaatgtta 236  Q
    ||||||| |||||||||||| ||||||||  ||  |||| |||||||| |||||||| ||||||| | ||||||||    
T  26265133 aacttttaaataaataattgttgtttttcataaataaaagttactactattagttgttttaacatatacaatgtta 26265208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 72 - 222
Target Start/End: Original strand, 191316 - 191461
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||| ||| ||||||||||||  ||||||||| |  ||| |||||| || ||| |||||||| |||||| ||||||||||||||||||||    |||||    
T  191316 tttttttattatgtgcaaatttgcacatgttaagaaatttaaaatgacaaatttgtcttggaa-ttgtgtattttatattaaatatataat----tttta 191410  T
Q  172 ataaataattg-atgtttttcaatgaaaaattactacttttagttgtcttaa 222  Q
    ||||||||| | ||||||| |||||||||||||| ||||||||||| |||||    
T  191411 ataaataatcggatgtttt-caatgaaaaattaccacttttagttggcttaa 191461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 212
Target Start/End: Complemental strand, 43641 - 43503
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaa-aattttttaaatga-taagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||| ||||||||||||||||  | ||||||| || ||||||||  | ||| |||| |||  ||||| | | |||||||||||||||||||     |||    
T  43641 tttttttatcatgtgcaaatttgaatatgttaagaagtttttaaagcaataactttaacttaaaacttatattttttatattaaatatataac----ttt 43546  T
Q  170 taataaataattgatgtttttcaatgaaaaattactactttta 212  Q
    |||| |||||||| || ||||||||||||||||||||||||||    
T  43545 taattaataattgttgattttcaatgaaaaattactactttta 43503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 225
Target Start/End: Complemental strand, 13263 - 13113
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||||||||||  ||||||||| |  ||| ||||  ||| ||||  |||||| |||||| ||||||||||||||| ||      ||||    
T  13263 gtttttctatcatgtgcaaatttgcacatgttaagaagtttaaaatagtaactttaatttggaatttgtgttttttatattaaatatgtagc----tttt 13168  T
Q  171 aataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacat 225  Q
    ||| || ||||| || |||||||||||||||||||||||||||||  ||||||||    
T  13167 aatcaacaattgttggttttcaatgaaaaattactacttttagttaccttaacat 13113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 70 - 235
Target Start/End: Original strand, 94017 - 94179
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    ||||||||||||||||||||||||  | ||||||| |  ||||||||  ||| ||||  ||||||||| |   |||| ||||||||||||| |   ||||    
T  94017 agtttttctatcatgtgcaaatttgcatatgttaagaagttttaaatactaactttacattggaacttatacattttgtattaaatatatagt---tttt 94113  T
Q  170 taataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacatgtccaatgtt 235  Q
    ||||||||||||  |  |||||||| |||| ||||||||||||||||  ||||||||| |||||||    
T  94114 taataaataattattagttttcaataaaaacttactacttttagttgatttaacatgtgcaatgtt 94179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 72 - 211
Target Start/End: Complemental strand, 22641 - 22503
Alignment:
Q  72 tttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttta 171  Q
    ||||||||| |||| |||||||  ||||||||| |  ||| ||||| ||| ||| |||| |||||| ||| || ||| |||||||||||    |||||||    
T  22641 tttttctattatgtacaaatttgcacatgttaagaaatttaaaatgttaattttgtcttagaacttttgtattctatgttaaatatatag---cttttta 22545  T
Q  172 ataaataattgatgtttttcaat--gaaaaattactactttt 211  Q
    |||||||||||||||||||||||   ||||||||||||||||    
T  22544 ataaataattgatgtttttcaataaaaaaaattactactttt 22503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 70 - 212
Target Start/End: Original strand, 17995 - 18134
Alignment:
Q  70 agtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataactttt 169  Q
    |||||||||||||| |||||||||  || ||||||||| ||  ||||  || |||| | |||||| ||||   |||||||||||||||||||   ||||     
T  17995 agtttttctatcatatgcaaatttgcacgtgttaaaatgttcaaaatagtatgtttgtattggaatttgtacattttatattaaatatataa---ctttc 18091  T
Q  170 taataaataattgatgtttttcaatgaaaaattactactttta 212  Q
    ||||||||||||| ||||||| ||| || | ||||||||||||    
T  18092 taataaataattgttgttttttaattaagagttactactttta 18134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 71 - 211
Target Start/End: Complemental strand, 182220 - 182085
Alignment:
Q  71 gtttttctatcatgtgcaaattttgacatgttaaaattttttaaatgataagtttatcttggaacttgtgtgttttatattaaatatataataacttttt 170  Q
    |||||||||||||||| ||||||  ||||||||| |  ||| || |  || ||| || ||| ||||||||| ||||||||||||||| |||     ||||    
T  182220 gtttttctatcatgtgtaaatttgtacatgttaagaagtttaaagtagtacgttgat-ttgaaacttgtgttttttatattaaatatgtaa----ctttt 182126  T
Q  171 aataaataattgatgtttttcaatgaaaaattactactttt 211  Q
    |||||||||||| |  |||||||| ||||||||||||||||    
T  182125 aataaataattgtttgttttcaataaaaaattactactttt 182085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 8506 - 8564
Alignment:
Q  166 tttttaataaataattgatgtttttcaatgaaaaattactacttttagttgtcttaacat 225  Q
    ||||||||||||||||| || |||||||| |||||||| ||||||| ||||| |||||||    
T  8506 tttttaataaataattgttg-ttttcaataaaaaattaatacttttcgttgttttaacat 8564  T

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Target: scaffold0155 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 3471 - 3571
Alignment:
Q  129 ttggaacttgtgtgttttatattaaatatataataactttttaataaataattgatgtttttcaatgaaaaa-ttactacttttagttgtcttaacatgt 227  Q
    ||||||||| ||| ||||||||||||||| |||     ||||||| |||||||| || |||| ||||||||| |||||||||||||||   |||||||||    
T  3471 ttggaacttatgttttttatattaaatatgtaa----cttttaatcaataattgttggtttttaatgaaaaagttactacttttagttacattaacatgt 3566  T
Q  228 ccaat 232  Q
     ||||    
T  3567 gcaat 3571  T

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Target: scaffold0074 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 45989 - 46038
Alignment:
Q  166 tttttaataaataattgatgtttttcaatgaaaaattactacttttagtt 215  Q
    ||||| ||||||||||| | || ||||||| |||||||||||||||||||    
T  45989 ttttttataaataattgttcttcttcaatgtaaaattactacttttagtt 46038  T

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