View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20633_high_78 (Length: 369)
Name: NF20633_high_78
Description: NF20633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20633_high_78 |
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Alignment Details
Target: chr4 (Bit Score: 149; Significance: 1e-78; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 50 - 215
Target Start/End: Original strand, 10432520 - 10432687
Alignment:
| Q |
50 |
gttgcgtatgtttctcatat--aaccttaataatattttctccttttttgcttctcgagccaccacttgcttttgttgagctattcacattcttaccttt |
147 |
Q |
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| T |
10432520 |
gttgcgtatgtttctcatatataaccttaataatattttctccttttttgcttctcgagccaccacttgcttttgttgagctattcacattctttccttt |
10432619 |
T |
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| Q |
148 |
attagacctatgcaaatattctttattaacatacatgaatttcataattataactccccatatccgta |
215 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10432620 |
attagagctatgcaaatattctttattaacatacatgaatttcataattataactccccatatccgta |
10432687 |
T |
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