View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20633_low_129 (Length: 280)
Name: NF20633_low_129
Description: NF20633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20633_low_129 |
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Alignment Details
Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 40826134 - 40826385
Alignment:
| Q |
13 |
aatattagctctttgggatgaatacggtattggtaccataggaaccatatattccattgttttgaatgtatatacgaaaatctggaatagtcaaattata |
112 |
Q |
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| T |
40826134 |
aatattagctctttgagatgaatatggtattggtaccataggaaccatttattccattgtttttaatgtatatacgaaaatatggaatagtcaaattata |
40826233 |
T |
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| Q |
113 |
aagttgaatcttatatgtaatatatgttcttaaagattgactcttgggcgtgcatgtcagaaaactaatttatagatgtaatgtttaacacgtaaatata |
212 |
Q |
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| T |
40826234 |
aagttgaatcttatatgtaatatatgttcttaaagattgactcttgggcgtgcatgtcagaaaactaatttatagatgtaatgtttaacacgtaaatata |
40826333 |
T |
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| Q |
213 |
aaagatcctattgaaaatttgaaattgaacaaaatttatagatatgcagtgt |
264 |
Q |
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| T |
40826334 |
aaagatcctattgaaaatttgaaattgaacaaaatttatagatatgcagtgt |
40826385 |
T |
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