View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20633_low_138 (Length: 268)
Name: NF20633_low_138
Description: NF20633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20633_low_138 |
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Alignment Details
Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 37 - 252
Target Start/End: Complemental strand, 7299236 - 7299021
Alignment:
| Q |
37 |
tagagactacaaccaaatgagcaaaatctgtgtattcttttgagtctccaaaaggaattattattgcttaggaaaaatgatgcttttgctagttggttta |
136 |
Q |
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| T |
7299236 |
tagagactgcaaccaaatgagcaaaatctgtgtattcttttgagtctccaaaaggaattattattgcttaggaaaaatgatgcttttgctagttggttta |
7299137 |
T |
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| Q |
137 |
ttatggtatgaaaagttgggaccattttggtttaaagtcattttctatgtagccaatttacttggctttgaagaaagtgcataacttctatcataggtct |
236 |
Q |
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| T |
7299136 |
ttatggtatgaaaagttgggaccattttggtttaaagtcattttctatgtagccaatttacttggctttgaagaaagtgcataacttctatcataggtct |
7299037 |
T |
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| Q |
237 |
gtctgagtctgatatg |
252 |
Q |
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|||||||||||||||| |
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| T |
7299036 |
gtctgagtctgatatg |
7299021 |
T |
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