View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20633_low_151 (Length: 257)
Name: NF20633_low_151
Description: NF20633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20633_low_151 |
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Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 18 - 244
Target Start/End: Original strand, 10820586 - 10820812
Alignment:
| Q |
18 |
aaaaatttgaagtaaagttcattaagaaaagtgttgtaaaagctctcaatcattttccaaagccattttcagtgattaatctctcaaatcttgatctact |
117 |
Q |
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| T |
10820586 |
aaaaatttgaagtaaagttcattaagaaaagtgttgtaaaagctctcaatcattttccaaagccattttcagtgattaatctctcaaatcttgatctact |
10820685 |
T |
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| Q |
118 |
ttctggtcgttttccagttacatacttgtatttctacaaaaaaccaaaactaggtaacttcaaatcttttgttaacaatcttaaaacttctctagcacaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10820686 |
ttctggtcgttttccagttacatacttgtatttctacaaaaaaccaaaactaggtaacttcaaatcttttgttaacaatcttaaaacttctctagcacaa |
10820785 |
T |
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| Q |
218 |
atacttaatcattactatccctttgct |
244 |
Q |
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||||||||||||||||||||||||||| |
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| T |
10820786 |
atacttaatcattactatccctttgct |
10820812 |
T |
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