View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20633_low_205 (Length: 234)
Name: NF20633_low_205
Description: NF20633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20633_low_205 |
 | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 221; Significance: 1e-122; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 4574779 - 4574559
Alignment:
| Q |
1 |
accctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4574779 |
accctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagca |
4574680 |
T |
|
| Q |
101 |
agttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4574679 |
agttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggag |
4574580 |
T |
|
| Q |
201 |
ttccaatgttatgttggccat |
221 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
4574579 |
ttccaatgttatgttggccat |
4574559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 4560972 - 4560757
Alignment:
| Q |
5 |
tttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagtt |
104 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4560972 |
tttttatggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttt-gaaagaaatttcagatagaggactaatagcaagtt |
4560874 |
T |
|
| Q |
105 |
ggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttcc |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4560873 |
ggtgtccacaagagaaagtattgaaccacccatcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttcc |
4560774 |
T |
|
| Q |
205 |
aatgttatgttggccat |
221 |
Q |
| |
|
|||||| |||||||||| |
|
|
| T |
4560773 |
aatgttgtgttggccat |
4560757 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 4266831 - 4267047
Alignment:
| Q |
5 |
tttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagtt |
104 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||| || ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4266831 |
tttttgtggataattaggcctgatcttgtcattgggggctcagttgttttgtcatctgatttttttaaagaaatttcagatagaggactaatagcaagtt |
4266930 |
T |
|
| Q |
105 |
ggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttcc |
204 |
Q |
| |
|
||||||||||||| ||||| |||||||||| ||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |
|
|
| T |
4266931 |
ggtgtccacaagataaagtgttgaaccacccttcgattggtggattcttgactcattgcggatggaattcaaccactgaaagcatatgtgctggagtgcc |
4267030 |
T |
|
| Q |
205 |
aatgttatgttggccat |
221 |
Q |
| |
|
|||||| |||||||||| |
|
|
| T |
4267031 |
aatgttgtgttggccat |
4267047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 4564182 - 4563962
Alignment:
| Q |
1 |
accctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagca |
100 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||| || ||||| |||||||| ||| |||| ||||||||||||||||| |||| ||| |
|
|
| T |
4564182 |
accctttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttgtcatctgagtttgtgaatgaaatttcagatagaggcttaattgca |
4564083 |
T |
|
| Q |
101 |
agttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggag |
200 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4564082 |
agttggtgtccacaggagaaagtattgaaccacccttcaattggcggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggag |
4563983 |
T |
|
| Q |
201 |
ttccaatgttatgttggccat |
221 |
Q |
| |
|
|||||||||| |||||||||| |
|
|
| T |
4563982 |
ttccaatgttgtgttggccat |
4563962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 4481161 - 4480944
Alignment:
| Q |
4 |
ctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagt |
103 |
Q |
| |
|
|||||||||||| |||||| || ||||||||||||||||||| ||||| || |||||||| | |||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
4481161 |
ctttttgtggattattaggtctaatcttgtcattggtggctcagtggtgttgtcatctgagtatttgaaagaaatttcaaatagaggcctaatagcaagt |
4481062 |
T |
|
| Q |
104 |
tggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttc |
203 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
4481061 |
tggtgtccacaagagaaagttttgaaccacccttcaatcggcggattcttgactcattgcggatggaactcaaccactgaaagtgtatgtgctggagtgc |
4480962 |
T |
|
| Q |
204 |
caatgttatgttggccat |
221 |
Q |
| |
|
||||||| |||||||||| |
|
|
| T |
4480961 |
caatgttgtgttggccat |
4480944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 4490016 - 4490236
Alignment:
| Q |
1 |
accctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4490016 |
accctttttgtggatcattaggcctgatcttgttattggtggctcacaggtgttgtcatctgattttttgaaagaaatttcagatagaggactaatagca |
4490115 |
T |
|
| Q |
101 |
agttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggag |
200 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||| |||| | |||||||||||||||||||| ||||||||||||| || || || ||||||||||||| |
|
|
| T |
4490116 |
agttggtgtccacaagagaaggtattgaatcacccttcaattggtggattcttgactcattgtggatggaactcaatcatggagagtatatgtgctggag |
4490215 |
T |
|
| Q |
201 |
ttccaatgttatgttggccat |
221 |
Q |
| |
|
| |||||||| |||||||||| |
|
|
| T |
4490216 |
tgccaatgttgtgttggccat |
4490236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 5 - 219
Target Start/End: Complemental strand, 4602256 - 4602042
Alignment:
| Q |
5 |
tttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagtt |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||| ||| || ||||||||||||||||| ||||||||||||| |
|
|
| T |
4602256 |
tttttgtggatcattaggcctgatcttgtcattggtggctcagtgattttgtcatctgagtttacaaatgaaatttcagatagaggcctaatagcaagtt |
4602157 |
T |
|
| Q |
105 |
ggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttcc |
204 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
4602156 |
ggtgtccacaagagaaagtgttgaaccacccttcgatcggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggagtgcc |
4602057 |
T |
|
| Q |
205 |
aatgttatgttggcc |
219 |
Q |
| |
|
||||| |||||||| |
|
|
| T |
4602056 |
gatgttgtgttggcc |
4602042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 218
Target Start/End: Original strand, 4514784 - 4514999
Alignment:
| Q |
3 |
cctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaag |
102 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||| |||||||| || ||||| ||| |||| |||||| |||||||||| ||||||||||| |
|
|
| T |
4514784 |
cctttttatggatcattaggcctgatcttgtcattggtggctcagtggttttgtcgtctgagtttgtgaatgaaattgcagatagaggcctaatagcaag |
4514883 |
T |
|
| Q |
103 |
ttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagtt |
202 |
Q |
| |
|
||||||||||||||||||||| |||||||||| |||| | || |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
4514884 |
ttggtgtccacaagagaaagttttgaaccacccttcaattggcggattcttgactcattgcggatggaactcaaccactgagagcatatgcgctggagtg |
4514983 |
T |
|
| Q |
203 |
ccaatgttatgttggc |
218 |
Q |
| |
|
|||||| | ||||||| |
|
|
| T |
4514984 |
ccaatgctttgttggc |
4514999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 4617489 - 4617273
Alignment:
| Q |
5 |
tttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagtt |
104 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||| ||| || |||||| |||||||||| ||||||||||||| |
|
|
| T |
4617489 |
tttttgtggatcataaggcctgatcttgtcattggtggctcagtgattttctcatctgagtttacaaatgaaattgcagatagaggcctaatagcaagtt |
4617390 |
T |
|
| Q |
105 |
ggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttcc |
204 |
Q |
| |
|
||||||||||||| ||||| |||||||||| |||| |||| |||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| || |
|
|
| T |
4617389 |
ggtgtccacaagacaaagtgttgaaccacccttcaatcggaggattcttgactcattgcggatggaattcaaccactgaaagtatatgcgctggagtgcc |
4617290 |
T |
|
| Q |
205 |
aatgttatgttggccat |
221 |
Q |
| |
|
|||||| |||||||||| |
|
|
| T |
4617289 |
aatgttgtgttggccat |
4617273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 4461594 - 4461374
Alignment:
| Q |
1 |
accctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagca |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||| |||||| | |||| |||||||| ||| |||| ||||||||||||||||| ||||||||| |
|
|
| T |
4461594 |
accctttttatggatcattaggcctgatcttgtcattggcggctcgtttattttgtcatctgagtttgtgaatgaaatttcagatagaggcctaatagca |
4461495 |
T |
|
| Q |
101 |
agttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggag |
200 |
Q |
| |
|
|| |||||||| |||||| ||||| ||||||||| |||| | |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4461494 |
agctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgactcattgtggatggaattcaaccactgaaagcatatgtgctggag |
4461395 |
T |
|
| Q |
201 |
ttccaatgttatgttggccat |
221 |
Q |
| |
|
| || ||||| |||||||||| |
|
|
| T |
4461394 |
tgccgatgttgtgttggccat |
4461374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 4613379 - 4613599
Alignment:
| Q |
1 |
accctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||| || ||| |||| ||||||||||||||||| ||||| || |
|
|
| T |
4613379 |
accctttttgtggatcattaggcctgatcttgtcattggcggctcagttgttttgtcatcagagtttgtgaatgaaatttcagatagaggcctaatcgcg |
4613478 |
T |
|
| Q |
101 |
agttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggag |
200 |
Q |
| |
|
|| |||||||| |||||| ||||||| ||||||| |||| | || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4613479 |
agctggtgtcctcaagagcaagtattaaaccacccttcaattggcggattcttgactcattgtggatggaactcaaccactgaaagcatatgtgctggag |
4613578 |
T |
|
| Q |
201 |
ttccaatgttatgttggccat |
221 |
Q |
| |
|
| |||||||| |||||||||| |
|
|
| T |
4613579 |
tgccaatgttgtgttggccat |
4613599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 3172212 - 3171992
Alignment:
| Q |
1 |
accctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagca |
100 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||| || ||| |||| ||||||||||||||||| ||||||||| |
|
|
| T |
3172212 |
accctttttgtggattattaggcctgatcttgtcattggtggctcggttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagca |
3172113 |
T |
|
| Q |
101 |
agttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggag |
200 |
Q |
| |
|
||||||||||| ||||||||||| |||||||| | |||| | || |||||||||||||| |||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
3172112 |
agttggtgtccgcaagagaaagtgttgaaccatccttcaattggcggattcttgactcactgcggatggaactcaaccacggaaagtgtatgtgctggaa |
3172013 |
T |
|
| Q |
201 |
ttccaatgttatgttggccat |
221 |
Q |
| |
|
| |||||||| ||| |||||| |
|
|
| T |
3172012 |
tgccaatgttgtgtaggccat |
3171992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 4458061 - 4457845
Alignment:
| Q |
5 |
tttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagtt |
104 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||||||||||| ||||| ||||| |||||| |||| |||| ||| |||||||| |||||||||||| |
|
|
| T |
4458061 |
tttttgtggataactaggcctgatcttgtcattggtggctcggttgttttgtcatcggattttgtgaatgaaacttctgatagaggcttaatagcaagtt |
4457962 |
T |
|
| Q |
105 |
ggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttcc |
204 |
Q |
| |
|
||||||||||||| ||||| |||||||||| |||| |||| ||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| || |
|
|
| T |
4457961 |
ggtgtccacaagataaagtgttgaaccacccttcaatcggaggattcttgactcattgtggatgaaactcaaccactgaaagcatatgcgctggagtgcc |
4457862 |
T |
|
| Q |
205 |
aatgttatgttggccat |
221 |
Q |
| |
|
|||| | ||||||||| |
|
|
| T |
4457861 |
aatgctgcgttggccat |
4457845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 4470274 - 4470054
Alignment:
| Q |
1 |
accctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagca |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||| || || | || | ||||||||||||||| ||||| | |
|
|
| T |
4470274 |
accctttttgtggatcattaggcccgatcttgtcattggcggctcggtagttttctcatcagagattgtaaatggaatttcagatagaggcctaatcgtg |
4470175 |
T |
|
| Q |
101 |
agttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggag |
200 |
Q |
| |
|
| |||||||| |||||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4470174 |
aactggtgtcctcaagagcaagtactgaaccacccttcaatcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgcgctggag |
4470075 |
T |
|
| Q |
201 |
ttccaatgttatgttggccat |
221 |
Q |
| |
|
| |||||||| |||||||||| |
|
|
| T |
4470074 |
tgccaatgttgtgttggccat |
4470054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 4579903 - 4579683
Alignment:
| Q |
1 |
accctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagca |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| || ||||| | ||||| ||||| || ||| |||| ||||||||||||||||| |||||| | |
|
|
| T |
4579903 |
accctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaataacg |
4579804 |
T |
|
| Q |
101 |
agttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggag |
200 |
Q |
| |
|
|| |||||||| |||||| ||||| ||||||||| |||| | |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
4579803 |
agctggtgtccgcaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcggatggaactcaatcactgaaagcatatctgctggag |
4579704 |
T |
|
| Q |
201 |
ttccaatgttatgttggccat |
221 |
Q |
| |
|
|||||||||| |||||||||| |
|
|
| T |
4579703 |
ttccaatgttgtgttggccat |
4579683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 4504062 - 4504278
Alignment:
| Q |
5 |
tttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagtt |
104 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||||||||| | ||| || |||||||||||| |||| |||| ||| |||||||||| ||||||||| |
|
|
| T |
4504062 |
tttttgtggattattaggcctgatcttgttattggtggctcagaggtgttgtcatctgattttgtgaatgaaacttctaatagaggacttgtagcaagtt |
4504161 |
T |
|
| Q |
105 |
ggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttcc |
204 |
Q |
| |
|
||||||||||||| ||||| |||||||||| |||| |||| ||||||||||||||||| ||||||||||||||||||||||| | ||||||||||| || |
|
|
| T |
4504162 |
ggtgtccacaagataaagtgttgaaccacccttcaatcggaggattcttgactcattgtggatggaactcaaccactgaaagtgtttgtgctggagtgcc |
4504261 |
T |
|
| Q |
205 |
aatgttatgttggccat |
221 |
Q |
| |
|
|||||| |||||||||| |
|
|
| T |
4504262 |
aatgttgtgttggccat |
4504278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 4586103 - 4585887
Alignment:
| Q |
5 |
tttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagtt |
104 |
Q |
| |
|
||||| ||||||||||| |||||||||||||||||||| || ||||||| |||||||| ||| ||| ||||||||||||||||| ||||| || ||| |
|
|
| T |
4586103 |
tttttatggatcattagacctgatcttgtcattggtggttccttggttttgtcatctgagtttaagaatgaaatttcagatagaggcctaatcgcgggtt |
4586004 |
T |
|
| Q |
105 |
ggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttcc |
204 |
Q |
| |
|
|||| || |||||| ||||||||||||||| |||| | ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
4586003 |
ggtgcccgcaagagcaagtattgaaccacccttcaattggtggattcttgactcactgtggatggaactcaaccactgaaagcatatgtgctggagtgcc |
4585904 |
T |
|
| Q |
205 |
aatgttatgttggccat |
221 |
Q |
| |
|
|||||| |||||||||| |
|
|
| T |
4585903 |
aatgttgtgttggccat |
4585887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 4592698 - 4592482
Alignment:
| Q |
5 |
tttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagtt |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| | | ||||| ||||| || ||| |||| ||||||||||||||||| |||| || || | |
|
|
| T |
4592698 |
tttttgtggatcattaggcctgatcttgtcattggtggcacaattgttttgtcatcggagtttgtgaatgaaatttcagatagaggcgtaatcgcgagct |
4592599 |
T |
|
| Q |
105 |
ggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttcc |
204 |
Q |
| |
|
||||||| |||||| ||||||| ||||||| |||| | |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||| |
|
|
| T |
4592598 |
ggtgtcctcaagagcaagtattaaaccacccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagtatatgtgctggaattcc |
4592499 |
T |
|
| Q |
205 |
aatgttatgttggccat |
221 |
Q |
| |
|
|||||| |||||||||| |
|
|
| T |
4592498 |
aatgttgtgttggccat |
4592482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 4598642 - 4598427
Alignment:
| Q |
1 |
accctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagca |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || ||| |||| ||||||||||||||||| || | ||| |
|
|
| T |
4598642 |
accctttttgtggatcattaggcctgatcttgtcattggtggctcggttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcttagttgca |
4598543 |
T |
|
| Q |
101 |
agttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggag |
200 |
Q |
| |
|
|| ||||||| |||||| ||||||| ||||| | |||| | ||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
4598542 |
agctggtgtctgcaagagcaagtattaaaccatccttcaattggtggattcttaactcattgcggatggaactcaaccactgaaagtatatgtgccggag |
4598443 |
T |
|
| Q |
201 |
ttccaatgttatgttg |
216 |
Q |
| |
|
| |||||||| ||||| |
|
|
| T |
4598442 |
tgccaatgttgtgttg |
4598427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 4506328 - 4506110
Alignment:
| Q |
1 |
accctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || || || ||| || ||||||||||||||| | || |||||| |
|
|
| T |
4506328 |
accctttttgtggatcattaggcctgatcttgtaattggtggctcagtggttttgtcttcagagtttgcaaatgaaatttcagatagaagccttatagca |
4506229 |
T |
|
| Q |
101 |
agttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggag |
200 |
Q |
| |
|
|| |||||| ||||||||||||| || || |||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4506228 |
agctggtgttcacaagagaaagtgttaaatcacccttcaattggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgcgctggag |
4506129 |
T |
|
| Q |
201 |
ttccaatgttatgttggcc |
219 |
Q |
| |
|
| |||||| | |||||||| |
|
|
| T |
4506128 |
tgccaatgctgtgttggcc |
4506110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 4557596 - 4557376
Alignment:
| Q |
1 |
accctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagca |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| |||||||| || ||||| ||||| || ||| | || ||||||||||||||||| ||||| || |
|
|
| T |
4557596 |
accctttttgtggatcattaggcccgatcttgtcatcggtggctcagttgttttgtcatcggagtttgtcaatgaaatttcagatagaggcctaatcgcg |
4557497 |
T |
|
| Q |
101 |
agttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggag |
200 |
Q |
| |
|
| ||||| || |||||| ||||||| ||||| | |||| | |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |
|
|
| T |
4557496 |
ggctggtgcccgcaagagcaagtattaaaccatccttcaattggtggattcttgactcattgtggatggaactcaaccactgaaagcatatctgctggag |
4557397 |
T |
|
| Q |
201 |
ttccaatgttatgttggccat |
221 |
Q |
| |
|
|||||||||| |||||||||| |
|
|
| T |
4557396 |
ttccaatgttgtgttggccat |
4557376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 4626422 - 4626203
Alignment:
| Q |
1 |
accctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||| | ||| ||||| || ||| ||| ||||||||||||||||| ||||| ||| |
|
|
| T |
4626422 |
accctttttgtggatcattaggcctgatcttgtgattggtggctcatttatttcgtcatccgagtttgagaatgaaatttcagatagaggcctaatcgca |
4626323 |
T |
|
| Q |
101 |
agttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggag |
200 |
Q |
| |
|
|| |||||||| |||||||||||| ||||||| | |||| | ||||||||||| |||||||| |||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
4626322 |
agctggtgtccgcaagagaaagtactgaaccatccttcaattggtggattcttaactcattgtggatggaactcaaccattgaaagcatatgcgctggag |
4626223 |
T |
|
| Q |
201 |
ttccaatgttatgttggcca |
220 |
Q |
| |
|
|||||||| | ||||||||| |
|
|
| T |
4626222 |
ttccaatgctgtgttggcca |
4626203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 4622613 - 4622393
Alignment:
| Q |
1 |
accctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagca |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| || |||||| | |||| |||||||| ||| ||| |||||||||| |||||| ||||| ||| |
|
|
| T |
4622613 |
accctttttgtggatcattaggcctgaccttgtcatgggcggctcgtttattttgtcatctgagtttgagaatgaaatttcaggtagaggcctaatcgca |
4622514 |
T |
|
| Q |
101 |
agttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggag |
200 |
Q |
| |
|
||||||||||||||||| ||||| | ||||||| | || | |||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
4622513 |
ggttggtgtccacaagaggaagtacttaaccaccctgcaattggtggattcttgactcattgtggatggaattcaaccaccgaaagcatatgtgctggag |
4622414 |
T |
|
| Q |
201 |
ttccaatgttatgttggccat |
221 |
Q |
| |
|
|| ||||| | |||||||||| |
|
|
| T |
4622413 |
tttcaatgctgtgttggccat |
4622393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 4 - 221
Target Start/End: Complemental strand, 4571440 - 4571223
Alignment:
| Q |
4 |
ctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagt |
103 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||| || ||| |||| ||||||||||||||||| ||||| || || |
|
|
| T |
4571440 |
ctttttgtggatcattaggcccgatcttgtcattggtggctcagttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaattgctggt |
4571341 |
T |
|
| Q |
104 |
tggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttc |
203 |
Q |
| |
|
||||| | |||||||||||||||||||| | |||| | ||||| ||||||||||| || |||||||||||||| || |||||||||| | ||||||||| |
|
|
| T |
4571340 |
tggtgctcgcaagagaaagtattgaaccatccttcaattggtggtttcttgactcactgtggatggaactcaacgaccgaaagcatatctactggagttc |
4571241 |
T |
|
| Q |
204 |
caatgttatgttggccat |
221 |
Q |
| |
|
||||||| |||| ||||| |
|
|
| T |
4571240 |
caatgttgtgttagccat |
4571223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 5 - 219
Target Start/End: Complemental strand, 4516788 - 4516574
Alignment:
| Q |
5 |
tttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagtt |
104 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||||||| |||| ||||| |||||| |||| |||| ||| |||||||| |||||||||| | |
|
|
| T |
4516788 |
tttttgtggattattaggcctgaccttgtcattggtggctcggttattttgtcatccgattttgtgaatgaaacttcggatagaggcgtaatagcaagct |
4516689 |
T |
|
| Q |
105 |
ggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttcc |
204 |
Q |
| |
|
||||||| ||||||||||| |||||||| | |||||| || ||||||||||||||||| ||||||||||| || | |||||||| ||||| ||||| || |
|
|
| T |
4516688 |
ggtgtccgcaagagaaagtgttgaaccatccttcagttggaggattcttgactcattgtggatggaactccacaatggaaagcatctgtgccggagtacc |
4516589 |
T |
|
| Q |
205 |
aatgttatgttggcc |
219 |
Q |
| |
|
|||||| |||||||| |
|
|
| T |
4516588 |
aatgttgtgttggcc |
4516574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 4259815 - 4260035
Alignment:
| Q |
1 |
accctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagca |
100 |
Q |
| |
|
||||||||||||||||||||||||||| || | ||||||||||| | |||| |||||||| ||| || |||||||| |||||||| ||||| || |
|
|
| T |
4259815 |
accctttttgtggatcattaggcctgacctcattattggtggctcctttattttgtcatctgagtttgagagtgaaatttcggatagaggcctaatcgcg |
4259914 |
T |
|
| Q |
101 |
agttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggag |
200 |
Q |
| |
|
|| |||||||| |||||| ||||| |||||||| |||||| ||||||||||| ||||||||||||||||||||||||| ||||||||| ||||| | || |
|
|
| T |
4259915 |
agctggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttaactcattgcggatggaactcaaccattgaaagcatttgtgccgaag |
4260014 |
T |
|
| Q |
201 |
ttccaatgttatgttggccat |
221 |
Q |
| |
|
|||||||||| |||||||||| |
|
|
| T |
4260015 |
ttccaatgttgtgttggccat |
4260035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 78 - 221
Target Start/End: Original strand, 4256349 - 4256492
Alignment:
| Q |
78 |
tttcagatagaggactaatagcaagttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaac |
177 |
Q |
| |
|
|||| |||||||||||||| | ||||||||||| |||||| ||||| |||||||| |||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
4256349 |
tttcggatagaggactaatcgagagttggtgtccgcaagagcaagtactgaaccactcttcagttggtggattcttgactcattgaggatggaactcaac |
4256448 |
T |
|
| Q |
178 |
cactgaaagcatatgtgctggagttccaatgttatgttggccat |
221 |
Q |
| |
|
|| ||||||||| ||||| |||||||||||||| |||||||||| |
|
|
| T |
4256449 |
cattgaaagcatttgtgccggagttccaatgttgtgttggccat |
4256492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 219
Target Start/End: Complemental strand, 4568523 - 4568309
Alignment:
| Q |
5 |
tttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagtt |
104 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||||||| || |||| ||||| || ||| |||| | || ||| |||||||| | ||||||||| | |
|
|
| T |
4568523 |
tttttgtggatcattaggccttagcttgtcattggtggctcagttattttgtcatccgagtttgtgaatggaacttcggatagaggccaaatagcaagct |
4568424 |
T |
|
| Q |
105 |
ggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttcc |
204 |
Q |
| |
|
||||||| |||||| |||| |||||||||| |||||| || |||||||||||||||| ||||||||||| || |||||||| ||||| |||| || |
|
|
| T |
4568423 |
ggtgtccgcaagagcaagtgttgaaccacccttcagttggacgattcttgactcattgtggatggaactccacattggaaagcatttgtgccagagtacc |
4568324 |
T |
|
| Q |
205 |
aatgttatgttggcc |
219 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
4568323 |
aatgttatgttggcc |
4568309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 192
Target Start/End: Original strand, 4299486 - 4299673
Alignment:
| Q |
5 |
tttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagtt |
104 |
Q |
| |
|
|||||||||||||||||||| || ||||||||||| |||| | | |||| |||||||| ||| ||| ||||||||| ||||||| |||| ||||| | |
|
|
| T |
4299486 |
tttttgtggatcattaggccagaccttgtcattggcggcttgtttattttgtcatctgagtttgagaatgaaatttcaaatagaggcctaaccgcaagct |
4299585 |
T |
|
| Q |
105 |
ggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatg |
192 |
Q |
| |
|
|||||||||||| ||||| ||||||||| |||| | ||||||||||||||||| || |||||||||||||||| |||||||||||| |
|
|
| T |
4299586 |
agtgtccacaagaacaagtactgaaccacccttcaattggtggattcttgactcactgtggatggaactcaaccattgaaagcatatg |
4299673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 4493346 - 4493208
Alignment:
| Q |
81 |
cagatagaggactaatagcaagttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccac |
180 |
Q |
| |
|
|||||||||| ||||| || ||||||||||||||||||||| | ||||||||| ||| | |||||||||||||||||||| |||||||||||||| || |
|
|
| T |
4493346 |
cagatagaggcctaattgctagttggtgtccacaagagaaactgctgaaccaccattcgattggtggattcttgactcattgtggatggaactcaactac |
4493247 |
T |
|
| Q |
181 |
tgaaagcatatgtgctggagttccaatgttatgttggcc |
219 |
Q |
| |
|
||| ||||||||| ||||| |||||||| |||||||| |
|
|
| T |
4493246 |
caaaaacatatgtgccggagtgccaatgttgtgttggcc |
4493208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 98 - 209
Target Start/End: Original strand, 4391885 - 4391996
Alignment:
| Q |
98 |
gcaagttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctg |
197 |
Q |
| |
|
||||| |||||||| ||||| ||||||||||||||| || | | |||||||||| || ||||| ||||| |||||| ||| ||||||||| ||| || |
|
|
| T |
4391885 |
gcaagatggtgtccgaaagagcaagtattgaaccacccttgaatttgtggattcttaacgcattgtggatgaaactcacccattgaaagcatttgttcta |
4391984 |
T |
|
| Q |
198 |
gagttccaatgt |
209 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4391985 |
gagttccaatgt |
4391996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 4256289 - 4256329
Alignment:
| Q |
5 |
tttttgtggatcattaggcctgatcttgtcattggtggctc |
45 |
Q |
| |
|
|||||||| |||||||||||||| || |||||||||||||| |
|
|
| T |
4256289 |
tttttgtgtatcattaggcctgacctcgtcattggtggctc |
4256329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 1281581 - 1281365
Alignment:
| Q |
5 |
tttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagtt |
104 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||| ||||| ||| |||| |||||||| ||| ||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
1281581 |
tttttgtggatcactaggcctgatcttgtcattggcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagtt |
1281482 |
T |
|
| Q |
105 |
ggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttcc |
204 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
1281481 |
ggtgtccacaagagaaagtgttgaaccacccttcaatcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagtgcc |
1281382 |
T |
|
| Q |
205 |
aatgttatgttggccat |
221 |
Q |
| |
|
|||||| |||||||||| |
|
|
| T |
1281381 |
aatgttgtgttggccat |
1281365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 153; Significance: 3e-81; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 24103466 - 24103250
Alignment:
| Q |
5 |
tttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagtt |
104 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| ||||| || ||||| |||||||||||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
24103466 |
tttttgtggataattaggcctgatcttgtcattgggggctcagttgttttgtcatctgatttttttaaagaagtttcagatagaggactaatagcaagtt |
24103367 |
T |
|
| Q |
105 |
ggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttcc |
204 |
Q |
| |
|
||||||||||||| ||||| || ||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
24103366 |
ggtgtccacaagataaagtgttaaaccacccttcgattggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagtgcc |
24103267 |
T |
|
| Q |
205 |
aatgttatgttggccat |
221 |
Q |
| |
|
|||||| |||||||||| |
|
|
| T |
24103266 |
aatgttgtgttggccat |
24103250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 5 - 217
Target Start/End: Original strand, 27999764 - 27999976
Alignment:
| Q |
5 |
tttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagtt |
104 |
Q |
| |
|
||||||||||||| ||||||| ||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||||||| |||||| ||| || |
|
|
| T |
27999764 |
tttttgtggatcactaggcctaatcttgtcattggtggctcagtggttttgtcatctgagtttaggaaagaaatttcagatagaggcctaatatcaaatt |
27999863 |
T |
|
| Q |
105 |
ggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttcc |
204 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||| || | || ||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || |
|
|
| T |
27999864 |
ggtgtccacaagagaaagttttgaaccacccttcaatcagcgggttcttgactcactgcggatggaactcaaccaccgaaagcatatgcgctggagtgcc |
27999963 |
T |
|
| Q |
205 |
aatgttatgttgg |
217 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
27999964 |
aatgttgtgttgg |
27999976 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 149; Significance: 8e-79; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 1674693 - 1674477
Alignment:
| Q |
5 |
tttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagtt |
104 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||| ||| |||||||||||||||||||||| |||||| ||| || |
|
|
| T |
1674693 |
tttttgtggatcactaggcctgatcttgtcattggtggctcagtggttttgtcatctgagtttatgaaagaaatttcagatagaggcctaatatcaaatt |
1674594 |
T |
|
| Q |
105 |
ggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttcc |
204 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||| |||| ||||||||||| || |||||||||||||||||||||||||||||||| |||||||| || |
|
|
| T |
1674593 |
ggtgtccacaagagaaagtgttgaaccacccttcaatcggcggattcttgacacactgcggatggaactcaaccactgaaagcatatgcgctggagtgcc |
1674494 |
T |
|
| Q |
205 |
aatgttatgttggccat |
221 |
Q |
| |
|
|||||| |||||||||| |
|
|
| T |
1674493 |
aatgttgtgttggccat |
1674477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 20863504 - 20863724
Alignment:
| Q |
1 |
accctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagca |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| |||| ||||||||||||||||| ||||| || |
|
|
| T |
20863504 |
accctttttgtggatcattaggcctgatcttgtcattggtggctcggtgattttttcatctgcgtttgtgaatgaaatttcagatagaggcctaatcgcg |
20863603 |
T |
|
| Q |
101 |
agttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggag |
200 |
Q |
| |
|
|||||||||||||||||||| || |||||||| | |||| | |||||||| | |||||||| |||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
20863604 |
agttggtgtccacaagagaaggtgttgaaccatccttcaattggtggatttctaactcattgtggatggaactcaaccattgagagcatatgtgctggag |
20863703 |
T |
|
| Q |
201 |
ttccaatgttatgttggccat |
221 |
Q |
| |
|
| |||||||| || ||||||| |
|
|
| T |
20863704 |
tgccaatgttgtgctggccat |
20863724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 16685938 - 16686148
Alignment:
| Q |
11 |
tggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagttggtgtc |
110 |
Q |
| |
|
|||||||||||| |||||||||||||| | || || |||||||| |||||||| ||| ||| ||||| ||||||||| | ||||| || || ||||| | |
|
|
| T |
16685938 |
tggatcattaggtctgatcttgtcatttgcggttccgtggttttgtcatctgagtttaagaatgaaatctcagatagaagcctaatcgcgagctggtgcc |
16686037 |
T |
|
| Q |
111 |
cacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttccaatgtt |
210 |
Q |
| |
|
| |||||| ||||||| ||||| | |||| ||||||||||||| |||||||| ||||||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
16686038 |
cgcaagagcaagtattaaaccatccttcaatcggtggattcttaactcattgtggatggaactcaaccactgaaagtatatatgctggagttccaatgtt |
16686137 |
T |
|
| Q |
211 |
atgttggccat |
221 |
Q |
| |
|
|||||||||| |
|
|
| T |
16686138 |
gtgttggccat |
16686148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 221
Target Start/End: Original strand, 4349 - 4567
Alignment:
| Q |
3 |
cctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaag |
102 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| |||||| | |||| |||||||| ||| ||| ||||||||||||||||| ||||| || || |
|
|
| T |
4349 |
cctttttgtggatcattaggcctgaccttgtcattggcggctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgcgag |
4448 |
T |
|
| Q |
103 |
ttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagtt |
202 |
Q |
| |
|
||||||||||||||| ||||| ||||||||| |||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
4449 |
ctggtgtccacaagagcaagtactgaaccacccttcaattggtggattcttgactcattgcggatggaactcaaccattgaaagcatatgtgtaggagtg |
4548 |
T |
|
| Q |
203 |
ccaatgttatgttggccat |
221 |
Q |
| |
|
|||||||| |||||||||| |
|
|
| T |
4549 |
ccaatgttgtgttggccat |
4567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 3384 - 3600
Alignment:
| Q |
5 |
tttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagtt |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||| | |||| ||||| || ||| ||| ||||||||||||||||| ||||| |||| | |
|
|
| T |
3384 |
tttttgtggatcattaggcctgatcttgtcattggcggctcgtttattttgtcatcagaatttgagaatgaaatttcagatagaggcctaatcacaagct |
3483 |
T |
|
| Q |
105 |
ggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttcc |
204 |
Q |
| |
|
|||||||||||||| ||||| ||| ||||| |||| | |||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||| || |
|
|
| T |
3484 |
ggtgtccacaagagcaagtactgatccacccttcaattggtggattcttgactcattgtggatggaattcaaccactgaaagcatatgcgctggagtacc |
3583 |
T |
|
| Q |
205 |
aatgttatgttggccat |
221 |
Q |
| |
|
|||| | |||||||||| |
|
|
| T |
3584 |
aatgctttgttggccat |
3600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 3086887 - 3086671
Alignment:
| Q |
5 |
tttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctcatctgattttttgaaagaaatttcagatagaggactaatagcaagtt |
104 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| | || | |||||||| ||| ||||||||||||||||||||| ||||| ||||| | |
|
|
| T |
3086887 |
tttttgtggatcattaggcctgatcttgtcattggcggctcctttattatgtcatctgagtttgagaaagaaatttcagatagaggtctaatcgcaagct |
3086788 |
T |
|
| Q |
105 |
ggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctggagttcc |
204 |
Q |
| |
|
||||||| |||||| |||||||||| |||| |||| | |||||||||||||||||||| |||||||||||||| ||||||| || ||||||||| || |
|
|
| T |
3086787 |
ggtgtccgcaagagcaagtattgaatcacccttcaattggtggattcttgactcattgtggatggaactcaacggttgaaagcgtacttgctggagtgcc |
3086688 |
T |
|
| Q |
205 |
aatgttatgttggccat |
221 |
Q |
| |
|
|||||| |||||||||| |
|
|
| T |
3086687 |
aatgttgtgttggccat |
3086671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 98 - 221
Target Start/End: Original strand, 3443 - 3565
Alignment:
| Q |
98 |
gcaagttggtgtccacaagagaaagtattgaaccacctttcagtcggtggattcttgactcattgcggatggaactcaaccactgaaagcatatgtgctg |
197 |
Q |
| |
|
||||| |||||||| ||||| |||| |||||||||| || ||| ||||||||||| |||||||| |||||||||||||||| ||||||||| ||| ||| |
|
|
| T |
3443 |
gcaagatggtgtccgtaagagcaagtgttgaaccaccctt-agttggtggattcttaactcattgtggatggaactcaaccattgaaagcatttgttctg |
3541 |
T |
|
| Q |
198 |
gagttccaatgttatgttggccat |
221 |
Q |
| |
|
||||||||||| | ||||||||| |
|
|
| T |
3542 |
gagttccaatgctgcgttggccat |
3565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 1351057 - 1351098
Alignment:
| Q |
82 |
agatagaggactaatagcaagttggtgtccacaagagaaagt |
123 |
Q |
| |
|
||||||||||||||| | | |||||||||||||||||||||| |
|
|
| T |
1351057 |
agatagaggactaatggtaggttggtgtccacaagagaaagt |
1351098 |
T |
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