View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20633_low_7 (Length: 692)

Name: NF20633_low_7
Description: NF20633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20633_low_7
NF20633_low_7
[»] chr2 (40 HSPs)
chr2 (9-361)||(11017227-11017597)
chr2 (509-673)||(11018135-11018299)
chr2 (233-392)||(41573405-41573564)
chr2 (223-361)||(24479154-24479292)
chr2 (223-409)||(30267005-30267192)
chr2 (223-409)||(31342627-31342814)
chr2 (223-346)||(15513669-15513792)
chr2 (223-409)||(44920960-44921146)
chr2 (231-361)||(7702439-7702569)
chr2 (230-346)||(7718194-7718310)
chr2 (264-385)||(26734791-26734911)
chr2 (50-127)||(44411668-44411745)
chr2 (223-355)||(22966525-22966659)
chr2 (223-317)||(40016593-40016687)
chr2 (86-202)||(43752121-43752237)
chr2 (96-202)||(6218969-6219075)
chr2 (96-202)||(41197402-41197508)
chr2 (96-202)||(45367799-45367905)
chr2 (50-129)||(9647856-9647935)
chr2 (53-129)||(38434906-38434986)
chr2 (96-146)||(18958909-18958959)
chr2 (96-185)||(1456232-1456321)
chr2 (86-202)||(3866064-3866180)
chr2 (86-202)||(12734691-12734807)
chr2 (86-202)||(25834673-25834789)
chr2 (94-145)||(11006727-11006778)
chr2 (62-202)||(11992282-11992424)
chr2 (96-127)||(12141546-12141577)
chr2 (86-200)||(2610580-2610694)
chr2 (86-136)||(11412713-11412763)
chr2 (102-135)||(14197404-14197437)
chr2 (258-382)||(15540237-15540361)
chr2 (86-179)||(18188772-18188865)
chr2 (86-127)||(19337099-19337140)
chr2 (96-129)||(23714508-23714541)
chr2 (96-129)||(24102180-24102213)
chr2 (101-202)||(24583806-24583907)
chr2 (50-91)||(37393455-37393496)
chr2 (86-202)||(3243827-3243943)
chr2 (86-202)||(38429876-38429992)
[»] chr5 (49 HSPs)
chr5 (254-488)||(42076080-42076309)
chr5 (259-410)||(37233070-37233221)
chr5 (223-409)||(17037545-17037732)
chr5 (242-343)||(40401987-40402088)
chr5 (222-322)||(9333560-9333660)
chr5 (223-409)||(5078975-5079162)
chr5 (223-322)||(9354388-9354487)
chr5 (349-488)||(40389892-40390033)
chr5 (242-345)||(19985016-19985119)
chr5 (223-317)||(7410826-7410920)
chr5 (223-313)||(31068971-31069060)
chr5 (97-202)||(43475243-43475348)
chr5 (241-337)||(10869457-10869552)
chr5 (225-345)||(23679445-23679565)
chr5 (225-345)||(23855246-23855366)
chr5 (49-145)||(37124520-37124618)
chr5 (223-337)||(30786269-30786383)
chr5 (230-303)||(12042195-12042268)
chr5 (223-284)||(18191886-18191947)
chr5 (325-394)||(18191824-18191895)
chr5 (86-202)||(24178502-24178618)
chr5 (86-202)||(38684959-38685075)
chr5 (50-158)||(6888945-6889057)
chr5 (324-410)||(10869759-10869846)
chr5 (86-202)||(4496376-4496492)
chr5 (96-204)||(15588712-15588820)
chr5 (96-192)||(31636104-31636200)
chr5 (96-202)||(1275266-1275372)
chr5 (50-179)||(4026532-4026664)
chr5 (86-127)||(14667755-14667796)
chr5 (97-202)||(20456776-20456881)
chr5 (86-202)||(1287753-1287869)
chr5 (86-202)||(7359434-7359549)
chr5 (74-146)||(12577078-12577149)
chr5 (86-202)||(15489666-15489782)
chr5 (53-126)||(41833832-41833907)
chr5 (86-201)||(14665706-14665821)
chr5 (96-171)||(16347583-16347658)
chr5 (87-146)||(33667209-33667268)
chr5 (96-146)||(18351138-18351188)
chr5 (107-201)||(42199299-42199393)
chr5 (96-145)||(27895-27944)
chr5 (86-127)||(79505-79546)
chr5 (50-136)||(219693-219783)
chr5 (101-202)||(1525651-1525752)
chr5 (96-157)||(15168794-15168855)
chr5 (84-129)||(37065519-37065564)
chr5 (96-140)||(10082975-10083019)
chr5 (223-283)||(14117296-14117356)
[»] chr6 (45 HSPs)
chr6 (229-392)||(23264425-23264588)
chr6 (242-393)||(4485493-4485644)
chr6 (225-409)||(14669257-14669442)
chr6 (223-405)||(12591835-12592018)
chr6 (225-409)||(17719634-17719819)
chr6 (223-346)||(16734807-16734930)
chr6 (223-402)||(34374827-34375011)
chr6 (223-346)||(11936742-11936865)
chr6 (223-346)||(15361717-15361840)
chr6 (222-337)||(29667899-29668016)
chr6 (223-409)||(6684096-6684289)
chr6 (233-346)||(11948722-11948835)
chr6 (86-202)||(5258322-5258438)
chr6 (254-409)||(10070688-10070843)
chr6 (223-346)||(23904328-23904450)
chr6 (80-146)||(21870303-21870369)
chr6 (50-127)||(31818490-31818565)
chr6 (22-179)||(2079264-2079425)
chr6 (223-315)||(9631161-9631253)
chr6 (223-312)||(15690440-15690529)
chr6 (258-318)||(2941043-2941103)
chr6 (50-146)||(8364528-8364624)
chr6 (9-136)||(12134141-12134265)
chr6 (50-129)||(6641656-6641739)
chr6 (223-393)||(6673550-6673716)
chr6 (86-128)||(14389415-14389457)
chr6 (258-380)||(27969858-27969980)
chr6 (96-202)||(30031258-30031364)
chr6 (223-360)||(1942571-1942708)
chr6 (238-331)||(30481218-30481311)
chr6 (86-158)||(21352055-21352127)
chr6 (105-201)||(30679417-30679513)
chr6 (86-202)||(32755913-32756029)
chr6 (258-317)||(7601338-7601396)
chr6 (86-201)||(28085368-28085483)
chr6 (95-202)||(31832033-31832140)
chr6 (96-202)||(9593880-9593986)
chr6 (240-302)||(10935800-10935862)
chr6 (308-394)||(30129611-30129697)
chr6 (105-146)||(5897480-5897521)
chr6 (100-213)||(6906990-6907103)
chr6 (434-479)||(12592048-12592092)
chr6 (102-194)||(24665818-24665911)
chr6 (102-194)||(43234-43326)
chr6 (86-146)||(33084050-33084110)
[»] chr8 (51 HSPs)
chr8 (223-478)||(6403595-6403849)
chr8 (226-488)||(5000684-5000948)
chr8 (223-398)||(31347351-31347525)
chr8 (225-409)||(19369821-19370006)
chr8 (225-409)||(19448452-19448637)
chr8 (225-409)||(19532439-19532624)
chr8 (223-409)||(25637646-25637832)
chr8 (223-398)||(5650866-5651043)
chr8 (223-361)||(6801790-6801928)
chr8 (223-324)||(29553631-29553732)
chr8 (50-202)||(10824338-10824490)
chr8 (223-409)||(5528745-5528932)
chr8 (51-146)||(29700233-29700328)
chr8 (223-346)||(45356087-45356210)
chr8 (223-317)||(28249079-28249173)
chr8 (50-127)||(36143321-36143398)
chr8 (223-398)||(17634393-17634569)
chr8 (225-409)||(18766921-18767106)
chr8 (223-346)||(25638809-25638932)
chr8 (223-345)||(29345433-29345556)
chr8 (259-345)||(6223439-6223525)
chr8 (96-146)||(9695633-9695683)
chr8 (50-116)||(33511312-33511378)
chr8 (96-172)||(2776433-2776509)
chr8 (50-203)||(10080080-10080235)
chr8 (86-202)||(36565415-36565531)
chr8 (96-152)||(41444550-41444606)
chr8 (50-127)||(44681288-44681369)
chr8 (230-361)||(14997630-14997761)
chr8 (50-122)||(45419191-45419265)
chr8 (74-136)||(18474200-18474262)
chr8 (258-355)||(31369072-31369169)
chr8 (97-145)||(12611538-12611586)
chr8 (86-202)||(18125165-18125281)
chr8 (86-202)||(36545141-36545257)
chr8 (86-202)||(40813316-40813432)
chr8 (86-146)||(42493536-42493596)
chr8 (50-179)||(16705714-16705847)
chr8 (86-129)||(25985511-25985554)
chr8 (10-41)||(38667473-38667504)
chr8 (98-136)||(7103274-7103312)
chr8 (96-198)||(12491316-12491418)
chr8 (96-202)||(39946859-39946965)
chr8 (62-145)||(44373740-44373827)
chr8 (105-178)||(6483268-6483341)
chr8 (86-127)||(13171898-13171939)
chr8 (86-202)||(36395123-36395240)
chr8 (50-127)||(5908594-5908675)
chr8 (96-136)||(7046336-7046376)
chr8 (86-130)||(33666745-33666789)
chr8 (86-202)||(42854178-42854294)
[»] chr3 (44 HSPs)
chr3 (223-393)||(26707861-26708031)
chr3 (225-338)||(16457314-16457427)
chr3 (268-393)||(26735681-26735806)
chr3 (223-409)||(1627857-1628045)
chr3 (244-409)||(2943126-2943291)
chr3 (223-326)||(1613208-1613311)
chr3 (223-409)||(7407665-7407852)
chr3 (225-346)||(13845996-13846117)
chr3 (223-317)||(2550168-2550262)
chr3 (223-292)||(27259474-27259543)
chr3 (50-204)||(36820133-36820289)
chr3 (261-345)||(36035329-36035413)
chr3 (223-346)||(1654578-1654701)
chr3 (223-409)||(5498480-5498668)
chr3 (223-317)||(9633446-9633540)
chr3 (96-202)||(41842685-41842791)
chr3 (94-202)||(47233770-47233878)
chr3 (96-145)||(31337757-31337806)
chr3 (88-152)||(26490309-26490373)
chr3 (238-409)||(35082993-35083171)
chr3 (50-127)||(39600930-39601011)
chr3 (50-202)||(42510190-42510341)
chr3 (96-202)||(51447884-51447990)
chr3 (62-128)||(55244266-55244332)
chr3 (86-171)||(35033138-35033223)
chr3 (86-202)||(22065-22180)
chr3 (231-360)||(2179935-2180066)
chr3 (86-202)||(5168824-5168940)
chr3 (259-355)||(27713405-27713501)
chr3 (84-136)||(38430838-38430890)
chr3 (86-146)||(49503784-49503844)
chr3 (99-202)||(19737002-19737105)
chr3 (99-202)||(19757905-19758008)
chr3 (87-146)||(50960863-50960922)
chr3 (67-127)||(54365225-54365287)
chr3 (96-146)||(54128380-54128430)
chr3 (86-127)||(34719321-34719362)
chr3 (83-136)||(39535680-39535733)
chr3 (110-139)||(44443441-44443470)
chr3 (86-146)||(3987039-3987099)
chr3 (101-201)||(29374941-29375041)
chr3 (86-202)||(38060423-38060539)
chr3 (110-202)||(39235154-39235246)
chr3 (97-129)||(49841622-49841654)
[»] chr4 (50 HSPs)
chr4 (291-480)||(48465443-48465633)
chr4 (268-398)||(21317485-21317612)
chr4 (223-397)||(24558918-24559093)
chr4 (225-409)||(1684863-1685048)
chr4 (225-409)||(1152048-1152233)
chr4 (223-409)||(47065945-47066132)
chr4 (223-317)||(4881073-4881167)
chr4 (223-346)||(43600269-43600392)
chr4 (228-299)||(48464047-48464118)
chr4 (258-398)||(37750913-37751053)
chr4 (242-346)||(21539247-21539350)
chr4 (86-201)||(54470199-54470314)
chr4 (223-317)||(4904144-4904238)
chr4 (86-200)||(37797844-37797958)
chr4 (97-201)||(22420889-22420993)
chr4 (97-152)||(42293473-42293528)
chr4 (62-129)||(43070015-43070082)
chr4 (223-346)||(53300353-53300476)
chr4 (88-146)||(31459024-31459082)
chr4 (86-179)||(41192828-41192921)
chr4 (96-145)||(49738835-49738884)
chr4 (50-136)||(51252701-51252789)
chr4 (86-202)||(436221-436337)
chr4 (86-202)||(31959988-31960104)
chr4 (86-202)||(48174267-48174383)
chr4 (86-202)||(52569689-52569805)
chr4 (86-202)||(53707786-53707902)
chr4 (50-121)||(10208990-10209061)
chr4 (86-201)||(27450354-27450469)
chr4 (50-129)||(45423571-45423650)
chr4 (100-158)||(42639238-42639296)
chr4 (224-281)||(26075290-26075347)
chr4 (86-179)||(33709916-33710009)
chr4 (86-202)||(4440845-4440961)
chr4 (53-129)||(30807549-30807625)
chr4 (96-192)||(35555831-35555927)
chr4 (86-202)||(43433916-43434032)
chr4 (86-146)||(50471518-50471578)
chr4 (539-606)||(21607449-21607516)
chr4 (96-179)||(38903917-38904000)
chr4 (86-136)||(28236175-28236225)
chr4 (96-146)||(30621434-30621484)
chr4 (86-152)||(44047572-44047638)
chr4 (223-296)||(26075222-26075295)
chr4 (289-346)||(27739750-27739807)
chr4 (99-136)||(46715612-46715649)
chr4 (101-146)||(49987435-49987480)
chr4 (58-127)||(3254092-3254165)
chr4 (86-202)||(28497482-28497597)
chr4 (96-136)||(31403257-31403296)
[»] chr7 (54 HSPs)
chr7 (225-409)||(9242395-9242580)
chr7 (223-345)||(30089737-30089859)
chr7 (273-393)||(26701083-26701201)
chr7 (223-361)||(3234329-3234467)
chr7 (223-361)||(26621051-26621189)
chr7 (223-353)||(26608507-26608637)
chr7 (258-345)||(16086524-16086611)
chr7 (223-346)||(4685378-4685501)
chr7 (50-144)||(30200195-30200289)
chr7 (50-201)||(33072906-33073059)
chr7 (224-317)||(26224982-26225075)
chr7 (223-346)||(20277335-20277458)
chr7 (223-317)||(10022126-10022220)
chr7 (96-146)||(38920796-38920846)
chr7 (96-213)||(1740803-1740920)
chr7 (62-202)||(38606969-38607112)
chr7 (86-202)||(12841449-12841565)
chr7 (86-202)||(13859182-13859298)
chr7 (55-202)||(27893725-27893871)
chr7 (86-202)||(43281666-43281782)
chr7 (86-202)||(45836654-45836770)
chr7 (86-201)||(19262609-19262723)
chr7 (97-195)||(12966025-12966123)
chr7 (96-202)||(39906544-39906650)
chr7 (86-146)||(42187462-42187522)
chr7 (50-203)||(48736072-48736229)
chr7 (242-317)||(26205419-26205494)
chr7 (238-345)||(26619080-26619186)
chr7 (96-207)||(40169651-40169762)
chr7 (86-136)||(42177255-42177305)
chr7 (96-202)||(46356030-46356136)
chr7 (86-171)||(2885927-2886012)
chr7 (258-315)||(16170308-16170365)
chr7 (86-171)||(35906406-35906491)
chr7 (86-198)||(6374860-6374972)
chr7 (86-146)||(27021922-27021982)
chr7 (86-202)||(29650376-29650492)
chr7 (86-202)||(31005215-31005331)
chr7 (86-146)||(36514437-36514497)
chr7 (86-146)||(43282400-43282460)
chr7 (86-146)||(47848666-47848726)
chr7 (96-127)||(26742145-26742176)
chr7 (96-163)||(28020966-28021033)
chr7 (50-142)||(40139153-40139246)
chr7 (96-202)||(31682776-31682882)
chr7 (95-177)||(36101964-36102046)
chr7 (86-202)||(35559167-35559284)
chr7 (86-127)||(36136756-36136797)
chr7 (86-202)||(37617936-37618053)
chr7 (97-146)||(41948519-41948568)
chr7 (86-171)||(49029268-49029353)
chr7 (277-345)||(27135985-27136053)
chr7 (86-138)||(32630586-32630638)
chr7 (86-202)||(33349980-33350096)
[»] chr1 (53 HSPs)
chr1 (225-409)||(12189956-12190139)
chr1 (223-409)||(51758755-51758942)
chr1 (258-339)||(3399659-3399740)
chr1 (231-361)||(39368599-39368730)
chr1 (223-317)||(16222780-16222874)
chr1 (223-346)||(28636905-28637028)
chr1 (230-322)||(897464-897555)
chr1 (86-202)||(4001629-4001745)
chr1 (86-202)||(15085926-15086042)
chr1 (97-194)||(40416374-40416471)
chr1 (223-303)||(5911682-5911762)
chr1 (86-202)||(8671910-8672026)
chr1 (86-202)||(32082919-32083035)
chr1 (86-194)||(51812517-51812625)
chr1 (230-317)||(13208621-13208708)
chr1 (223-309)||(15214329-15214415)
chr1 (223-398)||(18308150-18308327)
chr1 (96-202)||(51602058-51602164)
chr1 (86-179)||(43423711-43423804)
chr1 (86-202)||(1210737-1210853)
chr1 (86-202)||(2544591-2544707)
chr1 (86-146)||(3819086-3819146)
chr1 (97-201)||(14226004-14226108)
chr1 (96-172)||(32404730-32404806)
chr1 (86-202)||(34792523-34792639)
chr1 (51-130)||(4590774-4590853)
chr1 (96-179)||(48431603-48431686)
chr1 (223-399)||(17112927-17113107)
chr1 (86-127)||(1661422-1661463)
chr1 (97-146)||(5338727-5338776)
chr1 (50-202)||(35828724-35828880)
chr1 (97-146)||(38868885-38868934)
chr1 (86-202)||(696261-696377)
chr1 (258-302)||(1843989-1844033)
chr1 (102-158)||(7921843-7921899)
chr1 (86-198)||(8391764-8391876)
chr1 (96-200)||(13827746-13827850)
chr1 (242-302)||(15204615-15204675)
chr1 (99-158)||(13827935-13827994)
chr1 (86-129)||(16943167-16943210)
chr1 (223-286)||(37097375-37097438)
chr1 (434-488)||(39367970-39368025)
chr1 (86-200)||(30202306-30202420)
chr1 (85-158)||(52073680-52073754)
chr1 (96-129)||(4380015-4380048)
chr1 (83-136)||(8343098-8343151)
chr1 (96-145)||(17267927-17267976)
chr1 (97-202)||(36339977-36340082)
chr1 (110-151)||(37591028-37591069)
chr1 (86-122)||(9509310-9509346)
chr1 (86-202)||(9592726-9592842)
chr1 (86-202)||(22090088-22090204)
chr1 (86-202)||(49347567-49347683)
[»] scaffold0684 (1 HSPs)
scaffold0684 (225-409)||(658-843)
[»] scaffold0002 (1 HSPs)
scaffold0002 (254-394)||(446211-446350)
[»] scaffold0069 (1 HSPs)
scaffold0069 (230-409)||(40609-40789)
[»] scaffold0576 (1 HSPs)
scaffold0576 (223-346)||(6701-6824)
[»] scaffold0024 (1 HSPs)
scaffold0024 (86-202)||(82713-82829)
[»] scaffold0018 (2 HSPs)
scaffold0018 (80-146)||(44098-44164)
scaffold0018 (86-202)||(31460-31576)
[»] scaffold0570 (1 HSPs)
scaffold0570 (96-201)||(1123-1228)
[»] scaffold0007 (1 HSPs)
scaffold0007 (223-331)||(8747-8853)
[»] scaffold0325 (1 HSPs)
scaffold0325 (98-169)||(11802-11873)


Alignment Details
Target: chr2 (Bit Score: 255; Significance: 1e-141; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 9 - 361
Target Start/End: Original strand, 11017227 - 11017597
Alignment:
Q  9 agcagagatgggaatgttgtgttggacgtgtggcaagagtaaagactagatgagataagattaggaatgaaaatatta--gagagtcgaggtagcaccta 106  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||    
T  11017227 agcagagatgggaatgttgcgttggacgtgtggcaagagtaaagactagatgagataagattaggaatgaaaatattaaagagagttgaggtagcaccta 11017326  T
Q  107 tagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatggagggttg 206  Q
    ||||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  11017327 tagtagaaaagatcgtggaaactcggcttaagtggtttgggtatgtggagagaagacccgtagattttgtagttagaagggtagatcaaatggagggttg 11017426  T
Q  207 tccaatcgacaatac----------------tgtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaa 290  Q
    || |||||||||| |                 ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11017427 tcaaatcgacaattcaacataattgagatctagtaacaattgaaaaccgttactaaataaagaaaattgttactaattaaatttagtaacatttgaccaa 11017526  T
Q  291 ttgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacatttaaaaa 361  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11017527 ttgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcagtaacatttaaaaa 11017597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 509 - 673
Target Start/End: Original strand, 11018135 - 11018299
Alignment:
Q  509 ttagtaggataatgcttggttgttgtcgacgtattttgctttaacatattttcatctagttggttaatcatgaagtgtgattctgtttgcagcctaagct 608  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||    
T  11018135 ttagtgggataatgcttggttgttgtcgacgtattttgctttaacatattttcatctatttagttaatcatgaagtgtgattctggttgcagcctaagct 11018234  T
Q  609 aatgatacatcattatacatatggatgaatgaactgcacctgcaatgaaggatttttatctaatt 673  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11018235 aatgatacatcattatacatatggatgaatgaactgcacctgcaatgaaggaattttatctaatt 11018299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 233 - 392
Target Start/End: Original strand, 41573405 - 41573564
Alignment:
Q  233 aaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacac 332  Q
    |||| ||| ||||||| ||| ||| |||||||||||||||||||||||| || | |||||||||||||||  |||||||||||||   ||||| |||||     
T  41573405 aaaaatgtaactaaatcaagaaaaatgttactaattaaatttagtaacagttaaacaattgttaggtaaaccccgtgttactaaattacttcaataacat 41573504  T
Q  333 tttatagtattatcaataacatttaaaaactgttacatatttatatttttgtaacacttt 392  Q
    ||||||||||||| | ||||||||| ||| |||| | | ||| |||||||||||||||||    
T  41573505 tttatagtattattagtaacatttagaaaatgttgcttttttgtatttttgtaacacttt 41573564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 223 - 361
Target Start/End: Original strand, 24479154 - 24479292
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| | ||||||||| |||  || ||||||||||||||||||||||||||||| ||||| ||||||||||  |||||||||||| ||||    
T  24479154 gtaacacttgaaaattattactaaatcaagataactgttactaattaaatttagtaacatttgaacaattcttaggtaaagctcgtgttactaaagagct 24479253  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaa 361  Q
    | ||| | | |||||||||||||| |||||||| |||||    
T  24479254 ttagttatattttatagtattatctataacattcaaaaa 24479292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 223 - 409
Target Start/End: Original strand, 30267005 - 30267192
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||| ||||||||||||||||||  ||| |||||||||||||||| ||||||||| ||| || |    
T  30267005 gtaacacttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagtaacacctgaacaattgttaggtaaagcccgtgttaccaaagagtt 30267104  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    | ||| ||| ||||||||| ||||  ||||| | ||||| |||  || || ||| | | |||||||||||||||||| ||||||||||    
T  30267105 ttagttacattttatagtactatccgtaacaatcaaaaagtgtcgcaaatgttacactattgtaacactttttgtataactagtaaca 30267192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 223 - 409
Target Start/End: Complemental strand, 31342814 - 31342627
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||| ||||| |||||||||||||  | |    
T  31342814 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttagataaagcccgtgttactaaagtgtt 31342715  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    | ||| ||| ||||||||| ||||  ||||| | ||||| |||| || ||  ||  || |||||||||||||||||| ||| ||||||    
T  31342714 ttagttacattttatagtactatctgtaacaatcaaaaagtgttgcaaatggtaccttattgtaacactttttgtatcacttgtaaca 31342627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 223 - 346
Target Start/End: Original strand, 15513669 - 15513792
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    ||||||||| |||| ||| | ||||| ||| ||| |||||||| |||||||| |||||| |||| ||||||||||||||||  ||||||||||||||| |    
T  15513669 gtaacaattaaaaattgtaagtaaatcaagaaaaatgttactagttaaattttgtaacacttgaacaattgttaggtaaagctcgtgttactaaaaagat 15513768  T
Q  323 tcagtaacactttatagtattatc 346  Q
    | ||| ||| ||||||||| ||||    
T  15513769 ttagttacattttatagtactatc 15513792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 223 - 409
Target Start/End: Original strand, 44920960 - 44921146
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||||||| ||  |||| |||||||||||||||||||||||  | | ||||||||||||||||  |||||||||||| || |    
T  44920960 gtaacacttgaaaattgtaactaaatcaaaaaaat-gttactaattaaatttagtaacacctaaacaattgttaggtaaagctcgtgttactaaagagtt 44921058  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    | ||| ||| ||||||||| ||||  ||||| | ||||| |||  || || ||| | | |||||||||||||||||| ||||||||||    
T  44921059 ttagttacattttatagtactatccgtaacaataaaaaaatgtcgcaaatgttacactattgtaacactttttgtatcactagtaaca 44921146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 231 - 361
Target Start/End: Original strand, 7702439 - 7702569
Alignment:
Q  231 tgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaac 330  Q
    |||||| | ||||||||| ||  ||| ||||| |||||||| |||||||||||||  |||||||||||||||| || | |||||||| ||||| ||| ||    
T  7702439 tgaaaattattactaaattaaaaaaaatgttattaattaaaattagtaacatttgtacaattgttaggtaaagcccatattactaaagagctttagttac 7702538  T
Q  331 actttatagtattatcaataacatttaaaaa 361  Q
    | ||| ||||||||||  |||||||||||||    
T  7702539 attttgtagtattatctgtaacatttaaaaa 7702569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 230 - 346
Target Start/End: Original strand, 7718194 - 7718310
Alignment:
Q  230 ttgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaa 329  Q
    ||||||| ||| ||||||| ||| ||| | ||||||||||||||||||||||  ||| |||||||||| ||||||||||||||||||| || || | | |    
T  7718194 ttgaaaattgtaactaaatcaagaaaaatattactaattaaatttagtaacacatgaacaattgttagataaagtccgtgttactaaagagttttaatta 7718293  T
Q  330 cactttatagtattatc 346  Q
    || ||||||||| ||||    
T  7718294 cattttatagtactatc 7718310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 264 - 385
Target Start/End: Original strand, 26734791 - 26734911
Alignment:
Q  264 taattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacatttaaaaact 363  Q
    ||||||||||||| || ||||||  |||||||||||||||||| | ||| |||| ||||| |||| || |||| | |||||||| ||||| || |||| |    
T  26734791 taattaaatttagcaatatttgaataattgttaggtaaagtccatattattaaagagctttagtatcattttacaatattatcagtaaca-ttcaaaatt 26734889  T
Q  364 gttacatatttatatttttgta 385  Q
    ||||| ||||||||||||||||    
T  26734890 gttacttatttatatttttgta 26734911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 44411668 - 44411745
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaa 127  Q
    |||||||||||||||| |||||  ||||| || |||||||||| || |||||||||||||||| ||||||||||||||    
T  44411668 aagactagatgagatatgattacaaatgacaacattagagagttgaagtagcacctatagtaggaaagatggtggaaa 44411745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 223 - 355
Target Start/End: Original strand, 22966525 - 22966659
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaagga--aattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaag 320  Q
    |||||| ||||||||| ||||||||||||  |  || | |||||||| ||||||||| |||||| | |||||||||||||||| || |||||||||| |     
T  22966525 gtaacacttgaaaactattactaaataaaaaataaaatattactaatgaaatttagttacatttaaacaattgttaggtaaagcccctgttactaaagac 22966624  T
Q  321 cttcagtaacactttatagtattatcaataacatt 355  Q
    ||| ||| ||| |||| |||||||||  |||||||    
T  22966625 ctttagttacattttagagtattatctgtaacatt 22966659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 223 - 317
Target Start/End: Original strand, 40016593 - 40016687
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 317  Q
    |||||| ||||||| | ||| ||||| ||| ||| ||||||| |||||||||||||||||||||  ||||||||||||||| || | ||||||||    
T  40016593 gtaacacttgaaaattattattaaatcaagtaaaatgttactgattaaatttagtaacatttgaataattgttaggtaaagaccctattactaaa 40016687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 43752237 - 43752121
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | |||||| |||||||||| |||| ||||| ||| |  |||||| ||||||  | ||    
T  43752237 agagagttggggtagcacctatagtagaaaaggtggtagaaaataggcttaggtgatttggacatgtagagagaagacctatagattatgtagtagggag 43752138  T
Q  186 ggtagatcaaatggagg 202  Q
     |||||||| |||||||    
T  43752137 agtagatcagatggagg 43752121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 6218969 - 6219075
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 195  Q
    |||||||| ||||||||||||||| ||||| | | |||||| ||| |||||| |||| ||||||||||  ||||||| |||||| || || |  ||||||    
T  6218969 ggtagcacttatagtagaaaagatagtggataataggcttaggtggtttggacatgtagagaggagatatgtagattatgtagtaaggagaggtgatcaa 6219068  T
Q  196 atggagg 202  Q
    |||||||    
T  6219069 atggagg 6219075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 41197508 - 41197402
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 195  Q
    ||||||||||||| |||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||||||||||||   || || ||||| |||||||||    
T  41197508 ggtagcacctataatagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagatccgtagatgccgttgtaagaagagtagatcaa 41197409  T
Q  196 atggagg 202  Q
    |||||||    
T  41197408 atggagg 41197402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 45367905 - 45367799
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 195  Q
    |||||||||||||||||||||| |||| |||| |   ||||  || |||||| |||| ||||| ||| ||||||||   || ||||||||||||||||||    
T  45367905 ggtagcacctatagtagaaaagttggtagaaaataaccttagatggtttggacatgtagagagaagacccgtagatgccgttgttagaagggtagatcaa 45367806  T
Q  196 atggagg 202  Q
    |||||||    
T  45367805 atggagg 45367799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 9647935 - 9647856
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaact 129  Q
    ||||||||||| ||||||||||| ||||  || |||| ||||| | || || |||||||||||||| |||||||||||||    
T  9647935 aagactagatgtgataagattagaaatgtcaacattatagagttggggcagtacctatagtagaaatgatggtggaaact 9647856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 38434906 - 38434986
Alignment:
Q  53 actagatgagataagattaggaatgaaaatattagagag----tcgaggtagcacctatagtagaaaagatggtggaaact 129  Q
    |||||| |||| |||||||| ||||| || |||||||||    | | ||||||||||||||||||||||||||||||||||    
T  38434906 actagacgagagaagattagaaatgacaacattagagagagaattggggtagcacctatagtagaaaagatggtggaaact 38434986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 18958909 - 18958959
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    |||||||||||||||||||||||||||||||| | |||||| ||| |||||    
T  18958909 ggtagcacctatagtagaaaagatggtggaaaataggcttaggtggtttgg 18958959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 185
Target Start/End: Original strand, 1456232 - 1456321
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||  ||||||  ||| ||||  |||||  ||||||||| ||| |||||    
T  1456232 ggtagcacctatcctagaaaagatggtggaaactcggcttaggtagtttggacgtgtagagataagatctctagattttgaagtaagaag 1456321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 3866064 - 3866180
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||| ||||| |||| |||| | ||||||  || ||||   |||| ||||| ||| |||||||| | || || |||||    
T  3866064 agagagtgggggtagcacctatagtaaaaaagttggtagaaaataggcttagatggtttgtgcatgtagagagaagacccgtagatgtcgtggtaagaag 3866163  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  3866164 agtagatcaaatggagg 3866180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 12734691 - 12734807
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||  |||| |||| | ||||||  || |||||| ||||  |||| ||| ||||||||   || || |||||    
T  12734691 agagagtgggggtagcacctatagtagaaaaattggtagaaaataggcttagatggtttggacatgtaaagagaagacccgtagatgccgtggtaagaag 12734790  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  12734791 agtagatcaaatggagg 12734807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 25834673 - 25834789
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||| | || |||   || || |||||    
T  25834673 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacctgtggatgccgttgtaagaag 25834772  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  25834773 agtagatcaaatggagg 25834789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 11006727 - 11006778
Alignment:
Q  94 gaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 145  Q
    ||||||||| |||||||||||||||||  ||||||||| |||||||| ||||    
T  11006727 gaggtagcatctatagtagaaaagatgacggaaactcgacttaagtggtttg 11006778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 202
Target Start/End: Complemental strand, 11992424 - 11992282
Alignment:
Q  62 gataagattaggaatgaaaatattagagag--tcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagagg 159  Q
    ||||||||||||||||| |  |||||||||  |   |||||||||||||||||||||| |||| |||| |  |||||  || |||||| || | |||||     
T  11992424 gataagattaggaatgacaccattagagagagtgagggtagcacctatagtagaaaagttggtagaaaataagcttagatggtttggacatatagagaga 11992325  T
Q  160 agatccgtagattttgtagttagaagggtagatcaaatggagg 202  Q
    ||| ||||||||   || |||||||| || |||||||||||||    
T  11992324 agacccgtagatgccgttgttagaagagtggatcaaatggagg 11992282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 127
Target Start/End: Original strand, 12141546 - 12141577
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaa 127  Q
    ||||||||||||||||||||||||||||||||    
T  12141546 ggtagcacctatagtagaaaagatggtggaaa 12141577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 2610580 - 2610694
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | ||||||||||||||| |||||| |||| |||| | ||||||  || |||||  |||| ||||| |||  ||||||| | || || |||||    
T  2610580 agagagtgggggtagcacctatagtggaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacacgtagatgtcgtggtaagaag 2610679  T
Q  186 ggtagatcaaatgga 200  Q
     ||||||||||||||    
T  2610680 agtagatcaaatgga 2610694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 86 - 136
Target Start/End: Original strand, 11412713 - 11412763
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggctta 136  Q
    ||||||| | ||||||||||||||||||||| |||||||||| | ||||||    
T  11412713 agagagttggggtagcacctatagtagaaaatatggtggaaaataggctta 11412763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 135
Target Start/End: Complemental strand, 14197437 - 14197404
Alignment:
Q  102 acctatagtagaaaagatggtggaaactcggctt 135  Q
    |||||||||||||||||||||||||||| |||||    
T  14197437 acctatagtagaaaagatggtggaaactaggctt 14197404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 382
Target Start/End: Complemental strand, 15540361 - 15540237
Alignment:
Q  258 tgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaaca-ctttatagtattatcaataacattt 356  Q
    |||||||||||| || ||||||||||| | |||||| ||||||||||  ||| |||||||  |  |||||||||  ||| ||||||||| | ||||| ||    
T  15540361 tgttactaattatatctagtaacattt-aacaattgataggtaaagtttgtggtactaaacggtatcagtaacatttttttagtattattagtaacaatt 15540263  T
Q  357 aaaaactgttacatatttatattttt 382  Q
    ||||| |||||| | |||| ||||||    
T  15540262 aaaaaatgttacttgtttacattttt 15540237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 18188772 - 18188865
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagt 179  Q
    ||||||| | |||||||||| |  ||||||||||||||||| |||| |||| ||| |||||  ||||  |||| |||||  |||||||||||||    
T  18188772 agagagttggggtagcacctcttctagaaaagatggtggaagctcgacttaggtggtttgggcatgtaaagagaagatctatagattttgtagt 18188865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 19337140 - 19337099
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaa 127  Q
    ||||||| | ||||||||||||||||| ||||||||||||||    
T  19337140 agagagttggggtagcacctatagtagtaaagatggtggaaa 19337099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 23714541 - 23714508
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaact 129  Q
    |||||||| |||||||||||||||||||||||||    
T  23714541 ggtagcacatatagtagaaaagatggtggaaact 23714508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 24102213 - 24102180
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaact 129  Q
    |||||||| |||||||||||||||||||||||||    
T  24102213 ggtagcacatatagtagaaaagatggtggaaact 24102180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 202
Target Start/End: Complemental strand, 24583907 - 24583806
Alignment:
Q  101 cacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatgga 200  Q
    |||||||| |||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||  ||| || ||||| ||||||||||||||    
T  24583907 cacctataatagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgctgtcgtaagaagagtagatcaaatgga 24583808  T
Q  201 gg 202  Q
    ||    
T  24583807 gg 24583806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 37393496 - 37393455
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagagag 91  Q
    |||||||||||||||| ||| || ||||||||||||||||||    
T  37393496 aagactagatgagatatgatcagaaatgaaaatattagagag 37393455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 3243943 - 3243827
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||| ||||| || |||||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  3243943 agagagtgggggtagcacctatagtaaaaaagttgatggaaaataggcttagatggtttgggaatgtagagagaagacccgtagatgccgtggtaagaag 3243844  T
Q  186 ggtagatcaaatggagg 202  Q
      |||||||||||||||    
T  3243843 aatagatcaaatggagg 3243827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 38429876 - 38429992
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | || ||||||||||||||||||| |||| |||| | ||||||  || |||||| ||||  |||| ||| ||||| ||   || || |||||    
T  38429876 agagagtgggggcagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtaaagagaagacccgtatatgccgttgtaagaag 38429975  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  38429976 agtagatcaaatggagg 38429992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 123; Significance: 8e-63; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 254 - 488
Target Start/End: Original strand, 42076080 - 42076309
Alignment:
Q  254 aaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataaca 353  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||| || | ||||||||||||||  |||||    
T  42076080 aaattgttactaattaaatttagtaacatttgaacaattgttagataaagtccatgttactaaaaagcttcaggaatattttatagtattatcggtaaca 42076179  T
Q  354 tttaaaaactgttacatatttata-tttttgtaacactttttgtattactagtaacatnnnnnnntgtcacatatttataatttgagaagttgtaaaaaa 452  Q
    |||||||| ||||||||||||||| ||||| |||||||||||||||||| | ||| |        |||||||| |||||||||||||||||||| |||||    
T  42076180 tttaaaaattgttacatatttatattttttttaacactttttgtattacca-taaaa----aaaatgtcacatttttataatttgagaagttgt-aaaaa 42076273  T
Q  453 ctgtcgcaaagttgtctagaataaaaattgtgaatc 488  Q
     ||||||||||||||||||| |||||||||||||||    
T  42076274 gtgtcgcaaagttgtctagactaaaaattgtgaatc 42076309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 259 - 410
Target Start/End: Original strand, 37233070 - 37233221
Alignment:
Q  259 gttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacatttaa 358  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||    
T  37233070 gttactaattaaatttagtaacatttgagcaattgttaggtatagtccgtgttactaaaaagtttcagtaacattttatagtattatcagtaacatttaa 37233169  T
Q  359 aaactgttacatatttatatttttgtaacactttttgtattactagtaacat 410  Q
    ||||| || |||||||||||||| ||||||||||||||||||||||||||||    
T  37233170 aaactatttcatatttatattttcgtaacactttttgtattactagtaacat 37233221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 223 - 409
Target Start/End: Original strand, 17037545 - 17037732
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| |||||||  || ||||||| ||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| || |    
T  17037545 gtaacacttgaaaatcgtaactaaatcaagaaaaatgttactaattaaatttagtaacatttgaacaattgttaggtaaagtcagtgttactaaagagtt 17037644  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    | ||| ||| ||||||||||||||  ||||| ||||||| |||  || || ||| ||| |||||||||||||||||| ||||||||||    
T  17037645 ttagttacattttatagtattatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagtaaca 17037732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 242 - 343
Target Start/End: Complemental strand, 40402088 - 40401987
Alignment:
Q  242 actaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagta 341  Q
    ||||||||||| ||| |||||||||||||||||||| || ||||| |||||||||||||||||| ||||| |||||||||||||| |||| |||||||||    
T  40402088 actaaataaagaaaaatgttactaattaaatttagttacgtttgaacaattgttaggtaaagtctgtgttgctaaaaagcttcagcaacattttatagta 40401989  T
Q  342 tt 343  Q
    ||    
T  40401988 tt 40401987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 222 - 322
Target Start/End: Complemental strand, 9333660 - 9333560
Alignment:
Q  222 tgtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagc 321  Q
    ||||||||||||||| ||| || |||| ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  9333660 tgtaacaattgaaaattgtaacaaaatcaagaaaaatgttactaattaaatttagtaacatttgagcaattgttaggtaaagtcgatgttactaaaaagc 9333561  T
Q  322 t 322  Q
    |    
T  9333560 t 9333560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 223 - 409
Target Start/End: Complemental strand, 5079162 - 5078975
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||||||||| |||||||||||||  | |    
T  5079162 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaagtgtt 5079063  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    | ||| ||| ||||||||| ||||  ||||| | ||||| |||| || ||  ||  || |||||||||||||||||| ||| ||||||    
T  5079062 ttagttacattttatagtactatctgtaacaatcaaaaagtgttgcaaatggtaccttattgtaacactttttgtatcacttgtaaca 5078975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 9354487 - 9354388
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||||||||||| ||| ||| ||| ||| ||| |||||||||||||||||| |||||||||| |||||||||||||||| || |||||||||||||||    
T  9354487 gtaacaattgaaaattgtaactgaatcaagaaaaatgttactaattaaatttaataacatttgagcaattgttaggtaaagcccatgttactaaaaagct 9354388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 349 - 488
Target Start/End: Complemental strand, 40390033 - 40389892
Alignment:
Q  349 taacatttaaaaactgttacatatttatatttttgtaacactttttgtattactagtaaca-tnnnnnnntgtcacatatttataatttgagaagttgta 447  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| |       ||||| || ||||||| ||| ||||||||     
T  40390033 taacattcaaaaactgttacatatttatatttttgtaacattttttgtattaccagtaacattaaaaaaatgtcagatttttataaattgtgaagttgt- 40389935  T
Q  448 aaaaactgtcgcaaagttgtcta--gaataaaaattgtgaatc 488  Q
    ||||| |||||||||||||||||  || |||||||||||||||    
T  40389934 aaaaagtgtcgcaaagttgtctatggactaaaaattgtgaatc 40389892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 242 - 345
Target Start/End: Original strand, 19985016 - 19985119
Alignment:
Q  242 actaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagta 341  Q
    ||||||| ||||||| |||||||||||| ||||||||||||||||  ||||||||||||||||||  ||||||||| || || ||| ||| |||||||||    
T  19985016 actaaatcaaggaaaatgttactaattagatttagtaacatttgaataattgttaggtaaagtccaggttactaaagagttttagttacattttatagta 19985115  T
Q  342 ttat 345  Q
    ||||    
T  19985116 ttat 19985119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 223 - 317
Target Start/End: Original strand, 7410826 - 7410920
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 317  Q
    |||||| || |||| ||| ||||||| ||  ||| ||||||||||||||||||| |||| |||| |||||||||||||||| |||||||||||||    
T  7410826 gtaacatttcaaaattgtaactaaatcaaaaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaa 7410920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 31069060 - 31068971
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttac 313  Q
    |||||| || |||| ||| ||||||| ||| ||| |||||||||||||||||||||||| |||| |||||||||||||||| |||||||||    
T  31069060 gtaacacttaaaaattgtaactaaatcaagaaaaatgttactaattaaatttagtaaca-ttgaacaattgttaggtaaagcccgtgttac 31068971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 43475243 - 43475348
Alignment:
Q  97 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaa 196  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| ||||| |||   ||||| ||| | |||||| ||||||| || || |||||||| |    
T  43475243 gtagcacctatagtagaaaagatggtggaaactaggcttaggtggtttgggtattcagagagaagacctgtagatgttgtagtaaggagagtagatcaga 43475342  T
Q  197 tggagg 202  Q
    ||||||    
T  43475343 tggagg 43475348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 241 - 337
Target Start/End: Original strand, 10869457 - 10869552
Alignment:
Q  241 tactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttat 337  Q
    |||||||| | | ||||||||||||||||||||||||||||||||| ||||||||||||| | ||| | |||||||| || | | ||||||||||||    
T  10869457 tactaaatcatgaaaattgttactaattaaatttagtaacatttgaacaattgttaggtata-tccctcttactaaagagttacggtaacactttat 10869552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 225 - 345
Target Start/End: Original strand, 23679445 - 23679565
Alignment:
Q  225 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 324  Q
    |||| ||||||| ||| ||||||| ||| ||| ||||| ||||||||||| | |||||| || ||||| |||| |||||| |||||||||||| || ||     
T  23679445 aacacttgaaaattgtaactaaatcaagaaaaatgttattaattaaattttgcaacattcgaacaattattagataaagttcgtgttactaaagagtttt 23679544  T
Q  325 agtaacactttatagtattat 345  Q
    ||| ||| |||||||||||||    
T  23679545 agttacattttatagtattat 23679565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 225 - 345
Target Start/End: Complemental strand, 23855366 - 23855246
Alignment:
Q  225 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 324  Q
    |||| ||||||| ||| ||||||| ||| ||| ||||| ||||||||||| | |||||| || ||||| |||| |||||| |||||||||||| || ||     
T  23855366 aacacttgaaaattgtaactaaatcaagaaaaatgttattaattaaattttgcaacattcgaacaattattagataaagttcgtgttactaaagagtttt 23855267  T
Q  325 agtaacactttatagtattat 345  Q
    ||| ||| |||||||||||||    
T  23855266 agttacattttatagtattat 23855246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 145
Target Start/End: Original strand, 37124520 - 37124618
Alignment:
Q  49 aaagactagatgagataagattaggaatgaaaatatta--gagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 145  Q
    ||||||||||||| || | ||||| |||||||| ||||  |||||||| ||||||||||||||| ||||||||| |||||| | ||||||||| |||||    
T  37124520 aaagactagatgaaatcatattagaaatgaaaaaattaaagagagtcggggtagcacctatagttgaaaagatgatggaaaataggcttaagtcatttg 37124618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 223 - 337
Target Start/End: Original strand, 30786269 - 30786383
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||| ||| ||| ||| ||||||| ||| |||||||||||||||||  ||||||||||||||  || ||||||||||||| |    
T  30786269 gtaacacttgaaaattgtaacttaatcaagaaaaatgttactgattcaatttagtaacatttgaataattgttaggtaaatgccttgttactaaaaagat 30786368  T
Q  323 tcagtaacactttat 337  Q
    | ||| ||| |||||    
T  30786369 ttagtcacattttat 30786383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 230 - 303
Target Start/End: Complemental strand, 12042268 - 12042195
Alignment:
Q  230 ttgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaag 303  Q
    ||||||| ||| ||||||| ||| ||| ||||||| ||| ||||||||||||||||| ||||||||||||||||    
T  12042268 ttgaaaattgtaactaaatcaagaaaaatgttactgattcaatttagtaacatttgaacaattgttaggtaaag 12042195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 223 - 284
Target Start/End: Complemental strand, 18191947 - 18191886
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacattt 284  Q
    |||||||||||||| ||| ||||||| ||| ||| |||||||||||||||||||||||||||    
T  18191947 gtaacaattgaaaattgtaactaaattaagaaaaatgttactaattaaatttagtaacattt 18191886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 325 - 394
Target Start/End: Complemental strand, 18191895 - 18191824
Alignment:
Q  325 agtaacactttatagtattatcaataacatttaaaaactgttacatattt--atatttttgtaacacttttt 394  Q
    ||||||| || |||||||||||| ||||| ||||||| ||||||||||||  ||||||||||||||||||||    
T  18191895 agtaacatttaatagtattatcagtaacagttaaaaattgttacatatttatatatttttgtaacacttttt 18191824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 24178502 - 24178618
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||||||||| ||| ||||||||   || || |||||    
T  24178502 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtggagagaagacccgtagatgccgtggtaagaag 24178601  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  24178602 agtagatcaaatggagg 24178618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 38684959 - 38685075
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||| ||||||||   || || |||||    
T  38684959 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgtcgtaagaag 38685058  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  38685059 agtagatcaaatggagg 38685075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 158
Target Start/End: Original strand, 6888945 - 6889057
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagaga----gtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 145  Q
    |||||||||||||||| |||||| ||||| ||||||| |||    || | |||||||| |||||  |||||||||||||||| | |||||||||| ||||    
T  6888945 aagactagatgagatatgattagaaatgacaatattacagaaagagttggggtagcacgtatagaggaaaagatggtggaaaataggcttaagtggtttg 6889044  T
Q  146 gatatgtggagag 158  Q
    || |||| |||||    
T  6889045 gacatgtagagag 6889057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 324 - 410
Target Start/End: Original strand, 10869759 - 10869846
Alignment:
Q  324 cagtaacactttatagtattatcaataacatttaaaaac-tgttacatatttatatttttgtaacactttttgtattactagtaacat 410  Q
    ||||||||||||||||||||| || ||| |   |||||  |||||| ||||| ||||||||||||||||||||||| |||||||||||    
T  10869759 cagtaacactttatagtattaccagtaagacacaaaaaaatgttacttatttgtatttttgtaacactttttgtatcactagtaacat 10869846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 4496376 - 4496492
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  4496376 agagagtgggggtagcacctatagtagaaaagctggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 4496475  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  4496476 agtagatcaaatggagg 4496492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 204
Target Start/End: Complemental strand, 15588820 - 15588712
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 195  Q
    ||||| |||||||| ||||||||||||||||||| |||||| ||||||||| | ||| || || |||  | | ||||||||| | || || ||||||||     
T  15588820 ggtagtacctatagaagaaaagatggtggaaactaggcttaggtgatttgggtttgtagatagaagacacttggattttgtaataaggagagtagatcag 15588721  T
Q  196 atggagggt 204  Q
    |||||||||    
T  15588720 atggagggt 15588712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 192
Target Start/End: Complemental strand, 31636200 - 31636104
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagat 192  Q
    ||||||||||||||||||||||||||| |||||| | |||| ||| |||||  |||| ||||| ||| |||| ||| ||||||| || || ||||||    
T  31636200 ggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatgtagagagaagacccgtggatgttgtagtaaggagagtagat 31636104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 1275266 - 1275372
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 195  Q
    |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||||||||| ||   || || ||||| |||||||||    
T  1275266 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagatccgtaaatgccgtggtaagaagagtagatcaa 1275365  T
Q  196 atggagg 202  Q
    |||||||    
T  1275366 atggagg 1275372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 179
Target Start/End: Complemental strand, 4026664 - 4026532
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatatta---gagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||||||||||||||||||||  || || || || |   |||||| | |||| ||| || |||| ||||||||||||||||| | |||| ||| |||||    
T  4026664 aagactagatgagataagattaaaaacgagaacatgaagagagagttggggtaacacgtaaagtaaaaaagatggtggaaactagtcttaggtggtttgg 4026565  T
Q  147 atatgtggagaggagatccgtagattttgtagt 179  Q
    | |||| ||||||||| | ||||||| ||||||    
T  4026564 acatgtagagaggagacctgtagattctgtagt 4026532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 14667755 - 14667796
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaa 127  Q
    ||||||| | ||||||||||||||||||||||||||||||||    
T  14667755 agagagttggggtagcacctatagtagaaaagatggtggaaa 14667796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 202
Target Start/End: Original strand, 20456776 - 20456881
Alignment:
Q  97 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaa 196  Q
    ||||||||||||||||||||| |||| |||| | ||||||  || |||| | |||| ||||| ||| ||||||||   || || ||||| ||||||||||    
T  20456776 gtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgaacatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaa 20456875  T
Q  197 tggagg 202  Q
    ||||||    
T  20456876 tggagg 20456881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 1287869 - 1287753
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| |||  |||||||   || || |||||    
T  1287869 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacacgtagatgccgtggtaagaag 1287770  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  1287769 agtagatcaaatggagg 1287753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 7359549 - 7359434
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    |||||||  ||||| |||||||||||||||| |||||||||| | || ||| ||| |||||  |||| ||||| ||||  ||||||| |||||| || ||    
T  7359549 agagagttcaggtaacacctatagtagaaaatatggtggaaaataggtttaggtggtttgg-catgtagagagaagatatgtagattctgtagtaaggag 7359451  T
Q  186 ggtagatcaaatggagg 202  Q
     |||||||| |||||||    
T  7359450 agtagatcagatggagg 7359434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 12577149 - 12577078
Alignment:
Q  74 aatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||| || |||||||||| | |||||||||| ||||||||||||||||||||||| | |||| ||| |||||    
T  12577149 aatgacaacattagagagttg-ggtagcacctgtagtagaaaagatggtggaaactagacttatgtggtttgg 12577078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 15489782 - 15489666
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | ||||| |||||| |||||||||||||| ||||||| |||||  || |||||  |||| ||||| ||||  |||||||||||| | || ||    
T  15489782 agagagttggggtagtacctattgtagaaaagatggttgaaactcagcttagatggtttgggcatgtagagagaagatttgtagattttgtattaaggag 15489683  T
Q  186 ggtagatcaaatggagg 202  Q
     |||||| | |||||||    
T  15489682 agtagattagatggagg 15489666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 41833907 - 41833832
Alignment:
Q  53 actagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatag--tagaaaagatggtggaa 126  Q
    |||| ||| |||| |||||||||||  ||||||||||||| | |||||||||||| |  |||||||||||||||||    
T  41833907 actatatgggataggattaggaatgttaatattagagagttggggtagcacctatggtatagaaaagatggtggaa 41833832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 201
Target Start/End: Original strand, 14665706 - 14665821
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||| ||| || | |||| | ||||||  || |||||| |||| ||||| ||| ||||||||   || || |||||    
T  14665706 agagagtgggggtagcacctatagtagagaagttgatagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgtcgtaagaag 14665805  T
Q  186 ggtagatcaaatggag 201  Q
     |||||||||||||||    
T  14665806 agtagatcaaatggag 14665821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 16347658 - 16347583
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagat 171  Q
    |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||| ||||||||    
T  16347658 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagat 16347583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 146
Target Start/End: Original strand, 33667209 - 33667268
Alignment:
Q  87 gagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    |||||| | ||||||||||||||||||||||||||| |||||| | |||| ||| |||||    
T  33667209 gagagttggggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgg 33667268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 18351188 - 18351138
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||||||||||||||||||| ||||| |||||| |||||| ||| |||||    
T  18351188 ggtagcacctatagtagaaaatatggtagaaactaggcttaggtggtttgg 18351138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 42199299 - 42199393
Alignment:
Q  107 tagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatggag 201  Q
    ||||||||||||||||||||||| | |||| ||| |||||  |||| ||||| |||   ||||||| |||||| || || |||||||| ||||||    
T  42199299 tagtagaaaagatggtggaaactagacttaggtggtttgggcatgtagagagaagacatgtagattctgtagtaaggagagtagatcacatggag 42199393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 27895 - 27944
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 145  Q
    ||||||||||||||||||||||||| |||||| | |||||| ||| ||||    
T  27895 ggtagcacctatagtagaaaagatgatggaaaataggcttaggtggtttg 27944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 79505 - 79546
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaa 127  Q
    ||||||| | ||||| ||||||||||||||||||||||||||    
T  79505 agagagttggggtagtacctatagtagaaaagatggtggaaa 79546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 219783 - 219693
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatatt----agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggctta 136  Q
    ||||| ||| |||||||||||| |||||| || |||    ||||||| | |||||||||||| || |||||| ||||||||||| ||||||    
T  219783 aagacaagacgagataagattacgaatgacaacattggagagagagttggggtagcacctatcgttgaaaaggtggtggaaacttggctta 219693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 1525651 - 1525752
Alignment:
Q  101 cacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatgga 200  Q
    ||||||| |||||||||||||| |||||| | |||| |||  ||||| |||| ||||| ||| ||||  ||| || |||||| || |||||||| |||||    
T  1525651 cacctattgtagaaaagatggtagaaactagacttaggtggcttggacatgtagagagaagacccgtgaattctgcagttaggagagtagatcagatgga 1525750  T
Q  201 gg 202  Q
    ||    
T  1525751 gg 1525752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 157
Target Start/End: Original strand, 15168794 - 15168855
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggaga 157  Q
    ||||||||||||||||||||||||||| |||| | |||| | ||| |||||| |||| ||||    
T  15168794 ggtagcacctatagtagaaaagatggtagaaaataggctaaggtggtttggacatgttgaga 15168855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 129
Target Start/End: Original strand, 37065519 - 37065564
Alignment:
Q  84 ttagagagtcgaggtagcacctatagtagaaaagatggtggaaact 129  Q
    |||||||||  || ||||||||||||||||||||||||| ||||||    
T  37065519 ttagagagtttagatagcacctatagtagaaaagatggtagaaact 37065564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 10083019 - 10082975
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtg 140  Q
    |||| |||||||||||||||||||||| |||||| | ||||||||    
T  10083019 ggtatcacctatagtagaaaagatggtagaaactagacttaagtg 10082975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 223 - 283
Target Start/End: Original strand, 14117296 - 14117356
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatt 283  Q
    |||||| ||| ||| ||||||||||| ||| |||||||| ||| || ||||||||||||||    
T  14117296 gtaacatttggaaaatgttactaaatgaagaaaattgttgctattttaatttagtaacatt 14117356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 4e-49; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 229 - 392
Target Start/End: Complemental strand, 23264588 - 23264425
Alignment:
Q  229 attgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagta 328  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||| |||||||| |    
T  23264588 attgaaaattgttactaaatcaagaaaattgttactaattaaatttagtaacattcgaacaattgttaggtaaaatccgtgttactaaagagcttcagca 23264489  T
Q  329 acactttatagtattatcaataacatttaaaaactgttacatatttatatttttgtaacacttt 392  Q
    | |||||||||||||||||  |||| | ||||| |||||| ||||| |||||||||||||||||    
T  23264488 aaactttatagtattatcagaaacactaaaaaaatgttacttatttgtatttttgtaacacttt 23264425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 242 - 393
Target Start/End: Complemental strand, 4485644 - 4485493
Alignment:
Q  242 actaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagta 341  Q
    ||||||| ||||||| || ||||||||||||||||||| ||||||  |||||||||||||||||||||||| |||| || || ||||||| | ||||| |    
T  4485644 actaaatcaaggaaaatggtactaattaaatttagtaatatttgaataattgttaggtaaagtccgtgttattaaatagttttagtaacaatctatagaa 4485545  T
Q  342 ttatcaataacatttaaaaactgttacatatttatatttttgtaacactttt 393  Q
    |||| | ||||||| ||||| |||| |||||||||||||||| |||||||||    
T  4485544 ttattagtaacattaaaaaaatgttgcatatttatatttttgcaacactttt 4485493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 225 - 409
Target Start/End: Complemental strand, 14669442 - 14669257
Alignment:
Q  225 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 324  Q
    |||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||| | |||| | ||  ||||||||||||||||||||||||||||| || ||     
T  14669442 aacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattttgcaacactcgaataattgttaggtaaagtccgtgttactaaagagtttt 14669343  T
Q  325 agtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    ||| ||| |||||||||||||   ||||| ||||||| ||| ||| || ||| ||| |||||||||||||||||| ||||||||||    
T  14669342 agttacattttatagtattatttgtaacaattaaaaagtgtcacaaatgttacattattgtaacactttttgtatcactagtaaca 14669257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 223 - 405
Target Start/End: Original strand, 12591835 - 12592018
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||| |||||||||||||||||  | || |||||||||||||||| ||||||||||||| || |    
T  12591835 gtaacacttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagtaacgctcgaacaattgttaggtaaagcccgtgttactaaagagtt 12591934  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagt 405  Q
    | ||| ||| ||||||||||||||  ||||| ||||||| |||  || || ||| ||| |||||||||||||||||| ||||||    
T  12591935 ttagttacaatttatagtattatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagt 12592018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 225 - 409
Target Start/End: Complemental strand, 17719819 - 17719634
Alignment:
Q  225 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 324  Q
    |||| ||||||| ||| ||||||| ||| ||| ||||||||||||| ||| | |||| | || |||||||||| ||||||||||||||||||| || ||     
T  17719819 aacacttgaaaattgtaactaaatcaagaaaaatgttactaattaatttttgcaacactcgaacaattgttagataaagtccgtgttactaaagagtttt 17719720  T
Q  325 agtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    ||| ||| ||||||||||||||  ||||| ||||||| |||  || || ||| ||| |||||||||||||||||| ||||||||||    
T  17719719 agttacaatttatagtattatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagtaaca 17719634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 223 - 346
Target Start/End: Original strand, 16734807 - 16734930
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||  | |    
T  16734807 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacatttgaacaattgttaggtaaagcccgtgttactaaagtgtt 16734906  T
Q  323 tcagtaacactttatagtattatc 346  Q
    | ||| ||| ||||||||| ||||    
T  16734907 ttagttacattttatagtactatc 16734930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 223 - 402
Target Start/End: Original strand, 34374827 - 34375011
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaa--ttgttaggtaaagtccgtgttactaaaaag 320  Q
    ||||||||| |||| ||| | ||||| ||| ||| |||||||||||| |||| ||||||||||| |||  |||||||| ||| || ||||||||||| ||    
T  34374827 gtaacaattaaaaaatgtaattaaatcaagaaaaatgttactaattatattttgtaacatttgaacaaaattgttaggcaaaatctgtgttactaaagag 34374926  T
Q  321 cttcagtaacactttatagtattatcaataacatttaaaaactgttacatatttata---tttttgtaacactttttgtattact 402  Q
     || ||||| | ||||||||||||| | ||||||| | ||| |||||| | ||||||   ||||| |||||||||||||||||||    
T  34374927 tttgagtaatattttatagtattatgagtaacattcataaagtgttacttgtttatatattttttttaacactttttgtattact 34375011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 223 - 346
Target Start/End: Complemental strand, 11936865 - 11936742
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||| ||||| |||||||||||||  | |    
T  11936865 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttagataaagcccgtgttactaaagtgtt 11936766  T
Q  323 tcagtaacactttatagtattatc 346  Q
    | ||| ||| ||||||||| ||||    
T  11936765 ttagttacattttatagtactatc 11936742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 223 - 346
Target Start/End: Original strand, 15361717 - 15361840
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| || |||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||||||||| | |||||||||||| | |    
T  15361717 gtaacacttaaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagccggtgttactaaaatgtt 15361816  T
Q  323 tcagtaacactttatagtattatc 346  Q
    | ||| ||| ||||||||| ||||    
T  15361817 ttagttacattttatagtactatc 15361840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 222 - 337
Target Start/End: Complemental strand, 29668016 - 29667899
Alignment:
Q  222 tgtaacaattgaaaactgttactaaat--aaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaa 319  Q
    ||||||||||||||| ||| || ||||  |||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||   |||||| |||| |    
T  29668016 tgtaacaattgaaaattgtaacgaaatcaaaagaaaaatgttactaattaaatttagtaacatttgaacaattgttaggtaaagcttgtgttattaaaga 29667917  T
Q  320 gcttcagtaacactttat 337  Q
    | || ||||||| |||||    
T  29667916 gatttagtaacattttat 29667899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 223 - 409
Target Start/End: Original strand, 6684096 - 6684289
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| || |||| ||| ||| ||| ||| ||| |||||||||||||||||||||||| | || || |||||||||||||||| |||||||||| || |    
T  6684096 gtaacacttaaaaattgtaacttaatcaagaaaaatgttactaattaaatttagtaacactcgaaca-ttgttaggtaaagtccatgttactaaagagtt 6684194  T
Q  323 tcagtaacactttatag-------tattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    | ||| ||| |||||||       ||||||| |||||| ||||||| |||  || || ||||||| ||||||||||| |||||| ||||||||||    
T  6684195 ttagttacattttatagtattatctattatctataacaattaaaaagtgtcgcaaatgttatattattgtaacacttcttgtatcactagtaaca 6684289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 233 - 346
Target Start/End: Complemental strand, 11948835 - 11948722
Alignment:
Q  233 aaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacac 332  Q
    |||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||| ||||| |||||||||||||  | || ||| |||     
T  11948835 aaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttagataaagcccgtgttactaaagtgttttagttacat 11948736  T
Q  333 tttatagtattatc 346  Q
    ||||||||| ||||    
T  11948735 tttatagtactatc 11948722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 5258438 - 5258322
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||| |||||||||  || || |||||    
T  5258438 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagattccgttgtaagaag 5258339  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  5258338 agtagatcaaatggagg 5258322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 254 - 409
Target Start/End: Original strand, 10070688 - 10070843
Alignment:
Q  254 aaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataaca 353  Q
    |||||||||||||||||||||| ||||| |  |  |||||||| ||||||||||||||||| ||||| || ||| ||| |||||||||||||   |||||    
T  10070688 aaattgttactaattaaatttaataacactcaaataattgttacgtaaagtccgtgttact-aaaagttttagttacattttatagtattatttgtaaca 10070786  T
Q  354 tttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
     || |||| |||  || || ||| ||| |||||||||||||||||| | ||||||||    
T  10070787 atttaaaagtgtcgcaaatgttacattattgtaacactttttgtatcattagtaaca 10070843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 223 - 346
Target Start/End: Complemental strand, 23904450 - 23904328
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| || |||||||| ||| |||  |||||||| | ||||||||||||||||| |||||||||||||||| || | |||| ||| || |    
T  23904450 gtaacacttgaaaattgctactaaatgaagaaaaaagttactaaatcaatttagtaacatttgaacaattgttaggtaaagcccctcttacaaaagaggt 23904351  T
Q  323 tcagtaacactttatagtattatc 346  Q
    | | | ||||||||||||||||||    
T  23904350 tta-ttacactttatagtattatc 23904328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 80 - 146
Target Start/End: Complemental strand, 21870369 - 21870303
Alignment:
Q  80 aatattagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||||||||||| | |||||||||| |||||||||||||||| ||||||||||||| ||| |||||    
T  21870369 aatattagagagttggggtagcacctgtagtagaaaagatggtagaaactcggcttaggtggtttgg 21870303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 31818490 - 31818565
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaa 127  Q
    |||| |||||||||||||||||| ||||||| ||||  ||||||| |||||||||||||||| |||| ||||||||||    
T  31818490 aagattagatgagataagattagaaatgaaattatt--agagtcggggtagcacctatagtacaaaaaatggtggaaa 31818565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 179
Target Start/End: Original strand, 2079264 - 2079425
Alignment:
Q  22 atgttgtgttggacgtgtggcaagagtaaagactagatgagataagat-taggaatgaaaatattagagagtcgag----gtagcacctatagtagaaaa 116  Q
    ||||||||||||| |||||| ||  |  ||||||| |||||||| ||| ||| ||||| ||||||||||||  |||    |||||| |||||||||||||    
T  2079264 atgttgtgttggatgtgtggtaactggtaagactaaatgagatatgatatagaaatgacaatattagagagg-gagttgggtagcatctatagtagaaaa 2079362  T
Q  117 gatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagt 179  Q
    ||||||||||| | |||||||||| ||| | ||||| ||||| ||||  ||||||| ||||||    
T  2079363 gatggtggaaaataggcttaagtggtttaggtatgtagagagaagatttgtagattatgtagt 2079425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 223 - 315
Target Start/End: Complemental strand, 9631253 - 9631161
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttacta 315  Q
    |||||| ||||||||| ||||||||| ||| | |  |||||||| ||||||||||||||||||| ||||||||||| | || || ||||||||    
T  9631253 gtaacacttgaaaactattactaaatcaagaagaacgttactaagtaaatttagtaacatttgaacaattgttaggcatagcccctgttacta 9631161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 223 - 312
Target Start/End: Original strand, 15690440 - 15690529
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgtta 312  Q
    |||||| ||||||| ||| ||||||| ||| ||| |||||||||||||||||||| ||| |  | |||||||||| |||||||| |||||    
T  15690440 gtaacatttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagtgacactcaaacaattgttagctaaagtccatgtta 15690529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 258 - 318
Target Start/End: Original strand, 2941043 - 2941103
Alignment:
Q  258 tgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaa 318  Q
    ||||||||||||  ||||||||||||||| ||| |||||||||||||  ||||||||||||    
T  2941043 tgttactaattatgtttagtaacatttgagcaaatgttaggtaaagtttgtgttactaaaa 2941103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 146
Target Start/End: Original strand, 8364528 - 8364624
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||||||||| |||| |||||| ||||| ||||||||| ||| |  |||||| |||||||||||||| |||| |||| | |||||| ||| |||||    
T  8364528 aagactagatgggataggattagaaatgacaatattagacagttggagtagcaactatagtagaaaaggtggttgaaaataggcttaggtggtttgg 8364624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 136
Target Start/End: Complemental strand, 12134265 - 12134141
Alignment:
Q  9 agcagagatgggaatgttgtgttggacgtgtggcaagagtaaagactagatgagataagattaggaatgaaaatattagagag----tcgaggtagcacc 104  Q
    |||||||||| ||||||||||||||| |||||||||||       | |||||| |||  ||||| ||||| ||||||||||||    | ||||||  |||    
T  12134265 agcagagatgagaatgttgtgttggatgtgtggcaaga-------caagatgatatagaattagaaatgacaatattagagagagaattgaggtacgacc 12134173  T
Q  105 tatagtagaaaagatggtggaaactcggctta 136  Q
    ||||||||||||||||||||||| | ||||||    
T  12134172 tatagtagaaaagatggtggaaaataggctta 12134141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 6641739 - 6641656
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagaga----gtcgaggtagcacctatagtagaaaagatggtggaaact 129  Q
    ||||||||||| ||||||||| | ||||| |||||||||||    || | |||| |||||||||||||||||||||| ||||||    
T  6641739 aagactagatgggataagattggaaatgacaatattagagatagagttggggtatcacctatagtagaaaagatggtagaaact 6641656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 223 - 393
Target Start/End: Complemental strand, 6673716 - 6673550
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||||||| ||| ||| |||||||||  ||||||||||||| ||    ||||||||| ||||  ||||||||||||| | |     
T  6673716 gtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaa-aaatttagtaacagttcgttaattgttag-taaaacccgtgttactaaaca-ca 6673620  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaactgttacatatttatatttttgtaacactttt 393  Q
    |||||||||| |||| ||||| | | ||||||| ||||| ||||   |||||||| |||||||||||||||    
T  6673619 tcagtaacacgttat-gtatttttagtaacattaaaaaaatgttgtctatttatacttttgtaacactttt 6673550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 14389457 - 14389415
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaac 128  Q
    ||||||| |||||||||||||| ||||||||||||||||||||    
T  14389457 agagagttgaggtagcacctatcgtagaaaagatggtggaaac 14389415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 258 - 380
Target Start/End: Complemental strand, 27969980 - 27969858
Alignment:
Q  258 tgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacattta 357  Q
    |||||||| || ||||||| ||||||| | ||| ||||||||||||||  |||||||||||  |||||  |||| |||    |||||||||||||||||     
T  27969980 tgttactatttcaatttagcaacatttcaacaaatgttaggtaaagtctatgttactaaaagacttcaacaacatttttgcatattatcaataacatttg 27969881  T
Q  358 aaaactgttacatatttatattt 380  Q
      ||||||||||| | |||||||    
T  27969880 ttaactgttacatgtctatattt 27969858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 30031258 - 30031364
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 195  Q
    |||||||||||||||||||||| |||| |||| | ||||||  ||| ||||| |||| ||||| ||| || |||||   || || ||||| |||||||||    
T  30031258 ggtagcacctatagtagaaaagttggtagaaaataggcttagatgagttggacatgtagagagaagacccatagatgccgtcgtaagaagagtagatcaa 30031357  T
Q  196 atggagg 202  Q
    |||||||    
T  30031358 atggagg 30031364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 223 - 360
Target Start/End: Original strand, 1942571 - 1942708
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| |||| || ||| ||||||| ||| ||| | ||||| || ||||||| |||||||||| |||||| ||||||||  |  ||||| |||| | ||    
T  1942571 gtaacatttgataattgtaactaaatcaagaaaaatattactgataaaatttaataacatttgagcaattgctaggtaaaacctttgttattaaatatct 1942670  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaa 360  Q
    | ||| ||| ||||||||||||||  ||||| ||||||    
T  1942671 ttagttacattttatagtattatctgtaacaattaaaa 1942708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 238 - 331
Target Start/End: Complemental strand, 30481311 - 30481218
Alignment:
Q  238 tgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaaca 331  Q
    ||||||||||| ||| ||| |||| |||||||||| |||||||| |||| ||| | |||| |||||  | |||||||||| ||||||| |||||    
T  30481311 tgttactaaatcaagaaaaatgttgctaattaaatctagtaacaattgaacaaattttagataaagatcatgttactaaagagcttcaataaca 30481218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 21352127 - 21352055
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagag 158  Q
    ||||||| |||||||||||||||||||||||  |||| |||| | ||||||  ||||||||| |||| |||||    
T  21352127 agagagtggaggtagcacctatagtagaaaaattggtagaaaataggcttagatgatttggacatgtagagag 21352055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 105 - 201
Target Start/End: Original strand, 30679417 - 30679513
Alignment:
Q  105 tatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatggag 201  Q
    ||||||||||||| |||| |||| | ||||||  ||||||||  |||| ||||||||| |||||||| | || || ||||  |||||||||||||||    
T  30679417 tatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagaggagacccgtagatgtcgtcgtaagaatagtagatcaaatggag 30679513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 32755913 - 32756029
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||| | ||| ||| |||| | ||| | |||||    
T  32755913 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggtcatgtagagggaagacccgaagatgtcgtaataagaag 32756012  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  32756013 agtagatcaaatggagg 32756029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 258 - 317
Target Start/End: Complemental strand, 7601396 - 7601338
Alignment:
Q  258 tgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 317  Q
    |||||||| ||| || | |||||||||||| ||| |||||||||||||||||||||||||    
T  7601396 tgttactatttagatcttgtaacatttgacaaat-gttaggtaaagtccgtgttactaaa 7601338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 201
Target Start/End: Original strand, 28085368 - 28085483
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||| ||   || || |||||    
T  28085368 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggccatgtagagagaagacccgtaaataaagtggtaagaag 28085467  T
Q  186 ggtagatcaaatggag 201  Q
     |||||||||||||||    
T  28085468 agtagatcaaatggag 28085483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 202
Target Start/End: Complemental strand, 31832140 - 31832033
Alignment:
Q  95 aggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatca 194  Q
    ||||||||||||||||| || |||||||||  | | |||||||||| |||||| |||| ||||| || |||| ||||| | |||  || || ||||||||    
T  31832140 aggtagcacctatagtaaaatagatggtgggtattaggcttaagtggtttggacatgtagagagaaggtccggagattatatagcaagtagagtagatca 31832041  T
Q  195 aatggagg 202  Q
     |||||||    
T  31832040 gatggagg 31832033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 9593986 - 9593880
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 195  Q
    |||||||||  |||||||||||||||| |||| | |||||| ||| |||||  |||| ||||| |||   ||||||  |||||| ||||| ||||||||     
T  9593986 ggtagcaccattagtagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacatgtagatgctgtagtaagaagagtagatcag 9593887  T
Q  196 atggagg 202  Q
    |||||||    
T  9593886 atggagg 9593880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 240 - 302
Target Start/End: Complemental strand, 10935862 - 10935800
Alignment:
Q  240 ttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaa 302  Q
    ||||||||| | | ||| |||||||||||| ||  |||||||||||| |||||||||||||||    
T  10935862 ttactaaatcatgaaaaatgttactaattatatccagtaacatttgaacaattgttaggtaaa 10935800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 308 - 394
Target Start/End: Complemental strand, 30129697 - 30129611
Alignment:
Q  308 tgttactaaaaagcttcagtaacactttatagtattatcaataacatttaaaaactgttacatatttatatttttgtaacacttttt 394  Q
    |||||||||| | ||||||||||| |||| ||| |||    |||| |||||||| |||||| || |||||||||| |||||||||||    
T  30129697 tgttactaaagaccttcagtaacattttacagtcttactggtaacttttaaaaaatgttacttagttatatttttctaacacttttt 30129611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 5897480 - 5897521
Alignment:
Q  105 tatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||||||||||||||||||||| | |||||||||| |||||    
T  5897480 tatagtagaaaagatggtggaaaataggcttaagtggtttgg 5897521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 213
Target Start/End: Complemental strand, 6907103 - 6906990
Alignment:
Q  100 gcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatgg 199  Q
    ||||||||||||||| |||||||   |||| |||||| ||  ||||| ||||| ||||| |||   |||||||||||||| || || |||||||| |||     
T  6907103 gcacctatagtagaatagatggtcagaactaggcttacgtagtttggttatgtagagagaagacatgtagattttgtagtaaggagagtagatcagatgc 6907004  T
Q  200 agggttgtccaatc 213  Q
    ||||| ||| ||||    
T  6907003 agggtagtcaaatc 6906990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 479
Target Start/End: Original strand, 12592048 - 12592092
Alignment:
Q  434 tttgagaagttgtaaaaaactgtcgcaaagttgtctagaataaaaa 479  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||    
T  12592048 tttgagaagttgtaaaaag-tgtcgcaaatttgtctagaataaaaa 12592092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 194
Target Start/End: Original strand, 24665818 - 24665911
Alignment:
Q  102 acctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtaga-ttttgtagttagaagggtagatca 194  Q
    ||||||||||||||| ||||| |||| | |||||| ||| |||||| |||| ||||| ||| | ||||| ||||||||| || || ||||||||    
T  24665818 acctatagtagaaaatatggtagaaaataggcttaggtggtttggacatgtagagagaagacctgtagatttttgtagtaaggagagtagatca 24665911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 102 - 194
Target Start/End: Complemental strand, 43326 - 43234
Alignment:
Q  102 acctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatca 194  Q
    ||||||| ||||||| |||||||||||| |||||| ||| | |||  |||| ||||| ||||   ||||||||||||  ||||| ||||||||    
T  43326 acctataatagaaaaaatggtggaaactaggcttaggtggtctggccatgtagagagaagatttatagattttgtagcgagaagagtagatca 43234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 33084050 - 33084110
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||||| | |||||||||||| |||||||||||||| |||||| | |||| ||| |||||    
T  33084050 agagagttggggtagcacctatggtagaaaagatggtagaaactagacttaggtggtttgg 33084110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 92; Significance: 2e-44; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 223 - 478
Target Start/End: Original strand, 6403595 - 6403849
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||||||||||  ||| ||||||| ||| ||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||    
T  6403595 gtaacaattgaaatttgtaactaaattaagaaaaatgttactaattaaatttagtaacatttgagcaattgttaggtaaagcccgtgttattaaaaagct 6403694  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaactgttacatatttatatttttgtaacactttttgtattactagtaaca-tnnnnnnntgtc 421  Q
    ||||||||| ||||||  || ||   ||||| | ||||| |||| |||||||||| |||||||||| ||||||||| || ||||||| |       ||||    
T  6403695 tcagtaacattttatatcataat-tgtaacagtaaaaaaatgttgcatatttata-ttttgtaacattttttgtatgaccagtaacactaaaaaaatgtc 6403792  T
Q  422 acatatttataatttgagaagttgtaaaaaactgtcgcaaagttgtctagaataaaa 478  Q
    |||| | |||  ||||| ||||||||||||| ||||||||||| ||||||| |||||    
T  6403793 acatttatattttttgaaaagttgtaaaaaagtgtcgcaaagtcgtctagactaaaa 6403849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 226 - 488
Target Start/End: Original strand, 5000684 - 5000948
Alignment:
Q  226 acaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttca 325  Q
    ||||||||||| |||||||| || |   ||||||||||||||||||||||||||||||||| |||| ||||||| ||  | ||||||||||| ||||  |    
T  5000684 acaattgaaaattgttactacatcatcaaaattgttactaattaaatttagtaacatttgagcaatagttaggtgaaacctgtgttactaaagagctaga 5000783  T
Q  326 gtaacactttatagtattatcaataacatttaaaaactgttacatatttatatttttgtaacactttttgtattactagtaacat-nnnnnnntgtcaca 424  Q
    |||| || |||||||||||||| ||||| |  |||| |||||| ||||| || ||| |||||||||||||||| ||  |||||||        |||||||    
T  5000784 gtaagacgttatagtattatcagtaacactcgaaaaatgttacttatttgtactttggtaacactttttgtatcacgggtaacatgaaaaaaatgtcaca 5000883  T
Q  425 tatttataa-tttgagaagttgtaaaaaactgtcgcaaagttgtctagaataaa-aattgtgaatc 488  Q
     |||||||| ||||||| ||||| |||||  |||||||||||||||||| |||| |||||||||||    
T  5000884 catttataattttgagatgttgt-aaaaagagtcgcaaagttgtctagactaaacaattgtgaatc 5000948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 223 - 398
Target Start/End: Original strand, 31347351 - 31347525
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||||||||||| ||| || |||| ||| ||| || |||||||||||||||||||||||||| |||||||||| ||||  | ||||||||||  | ||    
T  31347351 gtaacaattgaaaattgtaaccaaatcaagaaaaatgctactaattaaatttagtaacatttgatcaattgttagataaatcctgtgttactaaccatct 31347450  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaactgttacatatttatatttttgtaacactttttgtat 398  Q
    ||||||||| ||||||  |||||   ||||| | ||||| ||||||||||||||| ||||||||||||||||||||    
T  31347451 tcagtaacattttatatcattatttgtaacaataaaaaaatgttacatatttata-ttttgtaacactttttgtat 31347525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 225 - 409
Target Start/End: Complemental strand, 19370006 - 19369821
Alignment:
Q  225 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 324  Q
    |||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||| | |||| | || |||||||||| ||||||||||||||||||| || ||     
T  19370006 aacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattttgcaacactcgaacaattgttagataaagtccgtgttactaaagagtttt 19369907  T
Q  325 agtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    ||| ||| ||||||||||||||  ||||| ||||||| |||  || || ||| ||| |||||||||||||||||| ||||||||||    
T  19369906 agttacattttatagtattatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagtaaca 19369821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 225 - 409
Target Start/End: Original strand, 19448452 - 19448637
Alignment:
Q  225 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 324  Q
    |||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||| | |||| | || |||||||||| ||||||||||||||||||| || ||     
T  19448452 aacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattttgcaacactcgaacaattgttagataaagtccgtgttactaaagagtttt 19448551  T
Q  325 agtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    ||| | | ||||||||||||||  ||||| ||||||| |||  || || ||| ||| |||||||||||||||||| ||||||||||    
T  19448552 agttatattttatagtattatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagtaaca 19448637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 225 - 409
Target Start/End: Complemental strand, 19532624 - 19532439
Alignment:
Q  225 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 324  Q
    |||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||| | |||| | || |||||||||| ||||||||||||||||||| || ||     
T  19532624 aacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattttgcaacactcgaacaattgttagataaagtccgtgttactaaagagtttt 19532525  T
Q  325 agtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    ||| | | ||||||||||||||  ||||| ||||||| |||  || || ||| ||| |||||||||||||||||| ||||||||||    
T  19532524 agttatattttatagtattatctgtaacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactagtaaca 19532439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 223 - 409
Target Start/End: Original strand, 25637646 - 25637832
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| | || |||||||||||||||| ||||||||||||| |  |    
T  25637646 gtaacacttgaaaattgtaactaaattaagaaaactgttactaattaaatttagcaacactcgaacaattgttaggtaaagcccgtgttactaaagaatt 25637745  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    | ||| ||| |||||||||||||   ||||| ||||||| |||| || ||  || ||| |||||||||||||||||| ||||||||||    
T  25637746 ttagttacattttatagtattat-tgtaacaattaaaaagtgttgcaaatgctacattattgtaacactttttgtatcactagtaaca 25637832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 223 - 398
Target Start/End: Complemental strand, 5651043 - 5650866
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||||| ||||||||| ||| ||| ||||||||||| ||||||| ||||||||| |||||||||||||||  || |||||| ||||||||    
T  5651043 gtaacacttgaaaactattactaaatcaagaaaaatgttactaattcaatttagcaacatttgaacaattgttaggtaaaacccttgttacaaaaaagct 5650944  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaactgttacata--tttatatttttgtaacactttttgtat 398  Q
    | |||  || ||||| |||||||| |||||||| ||| | ||| ||| |   ||| ||| ||||||||||||||||||    
T  5650943 ttagttgcattttatggtattatctataacattcaaatagtgtcacaaaatgttacattattgtaacactttttgtat 5650866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 223 - 361
Target Start/End: Complemental strand, 6801928 - 6801790
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||||| ||||||||| ||  ||| |||||||||||||||||||||||| |||| |||||||||||||||| || |||||||||| || |    
T  6801928 gtaacacttgaaaactattactaaatcaataaaaatgttactaattaaatttagtaacagttgaacaattgttaggtaaagcccctgttactaaagagtt 6801829  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaa 361  Q
    | ||| ||| |||| ||||||| |  ||||||| |||||    
T  6801828 ttagttacattttagagtattagctgtaacattaaaaaa 6801790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 223 - 324
Target Start/End: Original strand, 29553631 - 29553732
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||||||||||| ||| || |||| ||| ||| ||||||||||||||||||| ||||||||| |||||||||| |||||  |||||||||||||||||    
T  29553631 gtaacaattgaaaattgtaaccaaatcaagaaaaatgttactaattaaatttagcaacatttgagcaattgttagttaaagcgcgtgttactaaaaagct 29553730  T
Q  323 tc 324  Q
    ||    
T  29553731 tc 29553732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 50 - 202
Target Start/End: Complemental strand, 10824490 - 10824338
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggata 149  Q
    ||||||||||| |||| |||||| ||| ||||||||||||||| |||| |||||||| ||||||||||||||| |||| | |||||| ||| ||||| ||    
T  10824490 aagactagatgggatatgattagaaataaaaatattagagagttgaggcagcacctaaagtagaaaagatggtcgaaaataggcttaggtggtttgggta 10824391  T
Q  150 tgtggagaggagatccgtagattttgtagttagaagggtagatcaaatggagg 202  Q
    | | ||||  |||  | |||||||||||||  | || ||||||||||||||||    
T  10824390 tttagagaaaagactcatagattttgtagtatggagagtagatcaaatggagg 10824338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 223 - 409
Target Start/End: Original strand, 5528745 - 5528932
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |  | |||||||||| ||||||| ||||||||||| || |    
T  5528745 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacactcaaacaattgttagataaagtctgtgttactaaagagtt 5528844  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    | ||| ||| |||| |||||||||  ||||| ||||||| |||  || || | | ||| |||||||||||||||||| | ||||||||    
T  5528845 ttagttacattttacagtattatctgtaacagttaaaaagtgtcgcaaatataacattattgtaacactttttgtatcattagtaaca 5528932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 51 - 146
Target Start/End: Original strand, 29700233 - 29700328
Alignment:
Q  51 agactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||||||||||||| |||||| ||||||||| ||||||||| | |||||||||||||||||||||||||| ||||| | |||||| ||| |||||    
T  29700233 agactagatgagataggattagaaatgaaaatgttagagagttggggtagcacctatagtagaaaagatggaggaaagttggcttaggtggtttgg 29700328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 223 - 346
Target Start/End: Complemental strand, 45356210 - 45356087
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||||||||| |||||||||||||  | |    
T  45356210 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaagtgtt 45356111  T
Q  323 tcagtaacactttatagtattatc 346  Q
    | ||| ||| ||||||||| ||||    
T  45356110 ttagttacattttatagtactatc 45356087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 223 - 317
Target Start/End: Complemental strand, 28249173 - 28249079
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 317  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||||||||| |||||||||||||    
T  28249173 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaa 28249079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 36143321 - 36143398
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaa 127  Q
    |||||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||| |||| ||||||||||||    
T  36143321 aagactagatgagataggattagaaaggaaaagattagagagtcgaggtagcacctatagcagaatagatggtggaaa 36143398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 223 - 398
Target Start/End: Complemental strand, 17634569 - 17634393
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||||||| ||| ||| |||||||||||||||||| ||||| |||| |||||| ||||||||| ||||||||||||| |  |    
T  17634569 gtaacatttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttaataacacttgaacaattgataggtaaagcccgtgttactaaagaaat 17634470  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtat 398  Q
    | ||| ||| ||||||||| ||||  ||||| | ||||| |||  || || ||| ||| |||||||||||| |||||    
T  17634469 ttagttacattttatagtactatctgtaacaatcaaaaagtgtcgcaaatattacattattgtaacactttatgtat 17634393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 225 - 409
Target Start/End: Original strand, 18766921 - 18767106
Alignment:
Q  225 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 324  Q
    |||| ||||||| ||| ||||||| ||| ||| | ||| ||||||||||| | |||| |  | ||||||||||||||||| |||||||||||| || ||     
T  18766921 aacacttgaaaattgtaactaaatcaagaaaaatattattaattaaattttgcaacactcaaacaattgttaggtaaagtacgtgttactaaagagtttt 18767020  T
Q  325 agtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    ||| ||| |||||||||||||  | |||| ||||||| ||| | | || ||| ||| |||||||| ||||||||| ||||||||||    
T  18767021 agttacattttatagtattatatagaacaattaaaaagtgtcataaatgttacattattgtaacattttttgtatcactagtaaca 18767106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 223 - 346
Target Start/End: Original strand, 25638809 - 25638932
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||||||||  || ||||||||||  | |    
T  25638809 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaaacccatgttactaaagtgtt 25638908  T
Q  323 tcagtaacactttatagtattatc 346  Q
    | ||| ||| ||||||||| ||||    
T  25638909 ttagttacattttatagtactatc 25638932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 223 - 345
Target Start/End: Original strand, 29345433 - 29345556
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa-aagc 321  Q
    |||||| | ||||| ||| ||||||| ||| ||| | ||||||||||||||||||||| ||||| |||||||||||||||| || | |||||||| || |    
T  29345433 gtaacactcgaaaattgtaactaaatcaagaaaaatattactaattaaatttagtaacctttgaacaattgttaggtaaagcccctcttactaaacaaac 29345532  T
Q  322 ttcagtaacactttatagtattat 345  Q
    || ||| ||| |||||||||||||    
T  29345533 tttagttacattttatagtattat 29345556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 259 - 345
Target Start/End: Original strand, 6223439 - 6223525
Alignment:
Q  259 gttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattat 345  Q
    |||||| ||||||||||||||||||||   |||||||||||||||  |||||||||||| || || ||| |||||||||| ||||||    
T  6223439 gttactgattaaatttagtaacatttgtaaaattgttaggtaaagcgcgtgttactaaagagttttagttacactttataatattat 6223525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 9695633 - 9695683
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  9695633 ggtagcacctatagtagaaaagatggtggaaactcggcttaggtggtttgg 9695683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 33511312 - 33511378
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaa 116  Q
    ||||||| |||||||| |||||| ||||||||||||||||||| | |||| ||||||| ||||||||    
T  33511312 aagactatatgagatatgattagaaatgaaaatattagagagttggggtaacacctatggtagaaaa 33511378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 2776509 - 2776433
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagatt 172  Q
    |||||||||||| ||||||| |||||| ||||||||||||| ||| |||||  |||| ||||| ||| |||||||||    
T  2776509 ggtagcacctatcgtagaaatgatggtagaaactcggcttaggtggtttgggcatgttgagagaagacccgtagatt 2776433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 203
Target Start/End: Complemental strand, 10080235 - 10080080
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatatt----agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 145  Q
    ||||||||| ||||||||||||| ||||| || |||    ||||||| ||||||||| ||| |||||||||||||||||||||| ||| | | || ||||    
T  10080235 aagactagacgagataagattagaaatgacaacattagagagagagttgaggtagcatcta-agtagaaaagatggtggaaactaggcctga-tggtttg 10080138  T
Q  146 gatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatggaggg 203  Q
    |  |||| ||||| ||| | |  ||||||||||| || || |||||||||||| ||||    
T  10080137 ggcatgtagagagaagacctgaggattttgtagtaaggagagtagatcaaatgaaggg 10080080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 36565531 - 36565415
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| | | ||||||||   || || |||||    
T  36565531 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaatacccgtagatgccgtggtaagaag 36565432  T
Q  186 ggtagatcaaatggagg 202  Q
    |||||||||||||||||    
T  36565431 ggtagatcaaatggagg 36565415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 41444606 - 41444550
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgt 152  Q
    |||||||||||||||||||||||||||||||||| || ||| ||| |||||| ||||    
T  41444606 ggtagcacctatagtagaaaagatggtggaaactaggtttaggtggtttggacatgt 41444550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 44681369 - 44681288
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagagagtc----gaggtagcacctatagtagaaaagatggtggaaa 127  Q
    ||||||||| ||||||||||||| ||||| || ||||||||| |    | ||||||||||||| ||||||||||||||||||    
T  44681369 aagactagacgagataagattagaaatgacaacattagagagacagttgtggtagcacctataatagaaaagatggtggaaa 44681288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 230 - 361
Target Start/End: Original strand, 14997630 - 14997761
Alignment:
Q  230 ttgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaa 329  Q
    ||||||| | ||||||| | ||| ||| |||||||  ||||| |||||||||||||   ||||||||||||||  || |||||||||| ||||| ||| |    
T  14997630 ttgaaaattattactaattcaagaaaaatgttactggttaaaattagtaacatttgtagaattgttaggtaaaacccatgttactaaagagctttagtta 14997729  T
Q  330 cactttatagtattatcaataacatttaaaaa 361  Q
    |  |||||||||||| |  ||||||| |||||    
T  14997730 ccttttatagtattaactgtaacattcaaaaa 14997761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 45419191 - 45419265
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagagag--tcgaggtagcacctatagtagaaaagatggt 122  Q
    ||||||||| | ||||||||||||||||| |  |||||||||  | | |||||||||||||||||||||||||||    
T  45419191 aagactagaagggataagattaggaatgacaccattagagagaattggggtagcacctatagtagaaaagatggt 45419265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 136
Target Start/End: Complemental strand, 18474262 - 18474200
Alignment:
Q  74 aatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggctta 136  Q
    ||||| |||||||||||||    ||||||||||||||||||| ||||||||||||| ||||||    
T  18474262 aatgacaatattagagagttagagtagcacctatagtagaaatgatggtggaaactaggctta 18474200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 258 - 355
Target Start/End: Complemental strand, 31369169 - 31369072
Alignment:
Q  258 tgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacatt 355  Q
    ||||||||||||| |||||| |||||| | ||| ||||| ||||||    |||||||||| || |||||| ||| ||||||| ||||||||| |||||    
T  31369169 tgttactaattaagtttagtgacatttaaacaaatgttatgtaaagcttatgttactaaagagtttcagttacattttataggattatcaatcacatt 31369072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 12611538 - 12611586
Alignment:
Q  97 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 145  Q
    |||||||||| |||||||||||||||||||||| |||||| ||| ||||    
T  12611538 gtagcacctaaagtagaaaagatggtggaaactaggcttaggtggtttg 12611586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 18125165 - 18125281
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||| | |||| ||||| ||| ||||||||   || || ||||     
T  18125165 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgaacatgtagagagaagacccgtagatgccgtcgtaagaat 18125264  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  18125265 agtagatcaaatggagg 18125281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 36545141 - 36545257
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||| ||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  36545141 agagagtgggggtaacacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 36545240  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  36545241 agtagatcaaatggagg 36545257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 40813316 - 40813432
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | || |||  || |||||  |||| ||||| ||||| ||||||   || || |||||    
T  40813316 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtagagagaagatctgtagatgccgtggtaagaag 40813415  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  40813416 agtagatcaaatggagg 40813432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 42493596 - 42493536
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||||| | |||| ||||||||||||||||||| ||||||||| |||||| ||| |||||    
T  42493596 agagagttggggtaacacctatagtagaaaagattgtggaaactaggcttaggtggtttgg 42493536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 179
Target Start/End: Original strand, 16705714 - 16705847
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagagag--tcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg- 146  Q
    ||||||||||| ||||  ||||| ||||| || |||||||||  | |  |||||| |||||||| ||||||||||||| ||| |||||||||  |||||     
T  16705714 aagactagatgggatagaattagaaatgacaacattagagagagttggagtagcatctatagtaaaaaagatggtggagactaggcttaagtagtttggg 16705813  T
Q  147 -atatgtggagaggagatccgtagattttgtagt 179  Q
     |||||| ||||| ||| | ||| ||||||||||    
T  16705814 catatgtagagagaagacctgtatattttgtagt 16705847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 25985511 - 25985554
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaact 129  Q
    ||||||| | ||||||||||||||||||||||||||| ||||||    
T  25985511 agagagttggggtagcacctatagtagaaaagatggtagaaact 25985554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 41
Target Start/End: Original strand, 38667473 - 38667504
Alignment:
Q  10 gcagagatgggaatgttgtgttggacgtgtgg 41  Q
    ||||||||||||||||||||||||||||||||    
T  38667473 gcagagatgggaatgttgtgttggacgtgtgg 38667504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 98 - 136
Target Start/End: Original strand, 7103274 - 7103312
Alignment:
Q  98 tagcacctatagtagaaaagatggtggaaactcggctta 136  Q
    ||||||||||||||||||||||||| |||||| ||||||    
T  7103274 tagcacctatagtagaaaagatggtagaaactaggctta 7103312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 12491418 - 12491316
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 195  Q
    |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || ||||| |||||||||    
T  12491418 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaa 12491319  T
Q  196 atg 198  Q
    |||    
T  12491318 atg 12491316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 39946859 - 39946965
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 195  Q
    |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| || || ||| | ||||||   || || ||||| |||||||||    
T  39946859 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagaaagaagacctgtagatgccgtcgtaagaagagtagatcaa 39946958  T
Q  196 atggagg 202  Q
    |||||||    
T  39946959 atggagg 39946965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 62 - 145
Target Start/End: Original strand, 44373740 - 44373827
Alignment:
Q  62 gataagattaggaatgaaaatattagag----agtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 145  Q
    |||| |||||| ||||||||||||||||    ||| |  |||||||||| |||||||||||||||||||| | ||||| |||| ||||    
T  44373740 gataggattagaaatgaaaatattagagtgagagttggagtagcacctaaagtagaaaagatggtggaaaataggcttgagtggtttg 44373827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 6483268 - 6483341
Alignment:
Q  105 tatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtag 178  Q
    |||||||||||||| |||||||||| |||||| ||| |||||  |||| ||| | || |||| |||||||||||    
T  6483268 tatagtagaaaagagggtggaaacttggcttaggtggtttgggcatgtagagggaagttccggagattttgtag 6483341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 13171939 - 13171898
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaa 127  Q
    ||||||| | || |||||||||||||||||||||||||||||    
T  13171939 agagagttggggaagcacctatagtagaaaagatggtggaaa 13171898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 36395240 - 36395123
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaag-tgatttggatatgtggagaggagatccgtagattttgtagttagaa 184  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||| || || |||||  |||| ||||| ||| | ||||||   || || ||||    
T  36395240 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggctttagatggtttgggcatgtagagagaagacctgtagatgccgtggtaagaa 36395141  T
Q  185 gggtagatcaaatggagg 202  Q
    | ||||||||||||||||    
T  36395140 gagtagatcaaatggagg 36395123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 5908594 - 5908675
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagagag----tcgaggtagcacctatagtagaaaagatggtggaaa 127  Q
    ||||||||| | ||||||||||| ||||| || |||||||||    | | ||||| ||||||||||||||||||||| ||||    
T  5908594 aagactagacgggataagattagaaatgacaacattagagagagagttggggtagaacctatagtagaaaagatggttgaaa 5908675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 7046336 - 7046376
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggctta 136  Q
    ||||||||| || |||||||||||||||||| |||||||||    
T  7046336 ggtagcaccaatcgtagaaaagatggtggaacctcggctta 7046376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 33666789 - 33666745
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactc 130  Q
    ||||||| | |||||||||||| |||||||||||||| |||||||    
T  33666789 agagagttggggtagcacctatcgtagaaaagatggtagaaactc 33666745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 42854294 - 42854178
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||| ||||||||| ||| ||| |||| |||| | ||||||  || |||||| |||| ||||| ||| ||||||||   || || |||||    
T  42854294 agagagtgggggtaacacctatagcagagaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgttgtaagaag 42854195  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  42854194 agtagatcaaatggagg 42854178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 1e-43; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 223 - 393
Target Start/End: Original strand, 26707861 - 26708031
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| |||||||  |||||||||| ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||| || |    
T  26707861 gtaacatttgaaaatggttactaaatcaagaaaaatgttactaattaaatttagtaacatttgaacaattgttaggtaaagtctctgttactaaagaggt 26707960  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaactgttacatatttatatttttgtaacactttt 393  Q
    ||||||||| || |||||||| ||| ||||| | ||||||||||  ||||| |||||||||||||||||||    
T  26707961 tcagtaacatttcatagtattctcagtaacagtaaaaaactgttgtatattcatatttttgtaacactttt 26708031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 225 - 338
Target Start/End: Complemental strand, 16457427 - 16457314
Alignment:
Q  225 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 324  Q
    |||||||||||| ||| ||||||| ||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  16457427 aacaattgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagtaacatttgagcaattgttaggtaaagctcgtgttactaaaaagcttc 16457328  T
Q  325 agtaacactttata 338  Q
    ||||||| ||||||    
T  16457327 agtaacattttata 16457314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 268 - 393
Target Start/End: Original strand, 26735681 - 26735806
Alignment:
Q  268 taaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacatttaaaaactgtta 367  Q
    ||||||||||||||||||| ||||||||||||||| ||| |||||||||| ||||||| ||||| || |||||||||| | ||||||| ||||||||||     
T  26735681 taaatttagtaacatttgaacaattgttaggtaaaatccatgttactaaagagcttcaataacatttcatagtattattagtaacattaaaaaactgttg 26735780  T
Q  368 catatttatatttttgtaacactttt 393  Q
     ||||| |||||||||||||||||||    
T  26735781 tatattcatatttttgtaacactttt 26735806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 223 - 409
Target Start/End: Complemental strand, 1628045 - 1627857
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||||||| ||| ||| | |||||||||||||||||||||| |||| ||||||||| |||||||||||||||| ||| || |    
T  1628045 gtaacacttgaaaattgtaactaaatcaagaaaaatattactaattaaatttagtaacacttgaacaattgttaagtaaagtccgtgttacaaaagagtt 1627946  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatt-tttgtaacactttttgtattactagtaaca 409  Q
    | ||| ||| |||||||||||||   ||||| ||||||| |||  || || ||| ||| ||||||| ||||||| ||| ||||||||||    
T  1627945 ttagttacattttatagtattatatgtaacaattaaaaagtgtcgcaaatgttacattatttgtaatactttttatatcactagtaaca 1627857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 244 - 409
Target Start/End: Complemental strand, 2943291 - 2943126
Alignment:
Q  244 taaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtatt 343  Q
    ||||| ||| ||| |||||||||||||||||||||||||| || |||||||||||| ||| |||||||||||||  | || ||| ||| |||||||||||    
T  2943291 taaatcaagaaaaatgttactaattaaatttagtaacattcgaacaattgttaggttaagcccgtgttactaaagtgttttagttacattttatagtatt 2943192  T
Q  344 atcaataacatttaaaaactgttacatatttatatttttgtaacactttttgtattactagtaaca 409  Q
    |||  ||||| ||||||| |||  ||   ||| | | |||||||||||||||||| ||| ||||||    
T  2943191 atctgtaacaattaaaaagtgtcgcaatgttacactattgtaacactttttgtatcactggtaaca 2943126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 223 - 326
Target Start/End: Complemental strand, 1613311 - 1613208
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||| |||||||||||||| |||||||||| |||||||||| || |||||||||| ||||    
T  1613311 gtaacagttgaaaaatgtaactaaatcaagaaaaatgttactaaataaatttagtaacagttgaccaatttttaggtaaagcccctgttactaaatagct 1613212  T
Q  323 tcag 326  Q
    ||||    
T  1613211 tcag 1613208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 223 - 409
Target Start/End: Complemental strand, 7407852 - 7407665
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||||||| ||| ||| | ||||||||||||||||| |||| |||| |||||||||||||||| |||||||||||||  | |    
T  7407852 gtaacacttgaaaattgtaactaaatcaagaaaaatattactaattaaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaagtgtt 7407753  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    | ||| ||| ||||||||| ||||| ||||| | ||||| |||  || ||  ||  || |||||||||||||||||| ||| ||||||    
T  7407752 ttagttacattttatagtactatcagtaacaatcaaaaagtgtcgcaaatggtaccttattgtaacactttttgtatcacttgtaaca 7407665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 225 - 346
Target Start/End: Original strand, 13845996 - 13846117
Alignment:
Q  225 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 324  Q
    |||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||||||||| |||||||||||||  | ||     
T  13845996 aacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagcccgtgttactaaagtgtttt 13846095  T
Q  325 agtaacactttatagtattatc 346  Q
    ||| ||| ||||||||| ||||    
T  13846096 agttacattttatagtactatc 13846117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 223 - 317
Target Start/End: Original strand, 2550168 - 2550262
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 317  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||||||||| | |||||||||||    
T  2550168 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagcctgtgttactaaa 2550262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 223 - 292
Target Start/End: Complemental strand, 27259543 - 27259474
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaatt 292  Q
    |||||||||||||||| ||||||||| ||| ||| ||||||||||||||||||||||||||||| |||||    
T  27259543 gtaacaattgaaaactattactaaatcaagcaaaatgttactaattaaatttagtaacatttgaacaatt 27259474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 50 - 204
Target Start/End: Complemental strand, 36820289 - 36820133
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagagag--tcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgga 147  Q
    ||||||||| |||||| |||||| |||||  | |||||||||  | | ||||||||||||| ||| |||||||||||||||| |||||| ||| ||| ||    
T  36820289 aagactagacgagataggattagaaatgacgacattagagagagttggggtagcacctatattagcaaagatggtggaaactaggcttaggtggtttaga 36820190  T
Q  148 tatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatggagggt 204  Q
     ||||  |||| ||| || |||||| |||||| || |||||||||||||| ||||||    
T  36820189 catgtaaagagaagacccatagattatgtagtaaggagggtagatcaaatagagggt 36820133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 261 - 345
Target Start/End: Original strand, 36035329 - 36035413
Alignment:
Q  261 tactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattat 345  Q
    ||||||||||||||||||||| |||  ||||||||||||||||  |||||||||||| ||||| ||| ||| |||||||||||||    
T  36035329 tactaattaaatttagtaacaattgtacaattgttaggtaaagctcgtgttactaaagagctttagttacattttatagtattat 36035413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 223 - 346
Target Start/End: Original strand, 1654578 - 1654701
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||||||||||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| ||||||||| |||||| | |||||| ||||  | |    
T  1654578 gtaacaattgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaagtaaagcctgtgttattaaagtgtt 1654677  T
Q  323 tcagtaacactttatagtattatc 346  Q
    | ||| ||| ||||||||| ||||    
T  1654678 ttagttacattttatagtactatc 1654701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 223 - 409
Target Start/End: Original strand, 5498480 - 5498668
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    ||||||||| |||| ||| ||||||| ||| ||| ||||||||||||||||||||||| | ||| |||||||||||||||  |  |||||||||| || |    
T  5498480 gtaacaattaaaaaatgtaactaaatcaagaaaaatgttactaattaaatttagtaacttctgaacaattgttaggtaaaacctatgttactaaagagtt 5498579  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaactgttacatatttata---tttttgtaacactttttgtattactagtaaca 409  Q
    |  |||| | ||||| ||||||| | ||||||| | ||| | |||| | ||||||   ||||||||||||||| | ||||||| ||||||    
T  5498580 ttggtaatattttat-gtattattagtaacattcataaagtattacttgtttatattttttttgtaacactttatatattactggtaaca 5498668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 223 - 317
Target Start/End: Complemental strand, 9633540 - 9633446
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 317  Q
    |||||| ||||||||| |||||||||  |  ||| |||||||||||||||||||| |||||| | |||||||||||||||| || ||||||||||    
T  9633540 gtaacacttgaaaactattactaaatcgaaaaaaatgttactaattaaatttagttacatttaaacaattgttaggtaaagcccctgttactaaa 9633446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 41842791 - 41842685
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 195  Q
    |||||||||||||||||||||||||||||||||  | |||| ||| ||||| ||||| ||||| ||| | ||||||| |||||| |  || |||||||||    
T  41842791 ggtagcacctatagtagaaaagatggtggaaaccagtcttaggtggtttgggtatgtagagagaagagcggtagattctgtagtaatgagagtagatcaa 41842692  T
Q  196 atggagg 202  Q
    |||||||    
T  41842691 atggagg 41842685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 94 - 202
Target Start/End: Complemental strand, 47233878 - 47233770
Alignment:
Q  94 gaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatc 193  Q
    |||||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||| ||||||||   || |||||||| |||||||    
T  47233878 gaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgttgttagaagagtagatc 47233779  T
Q  194 aaatggagg 202  Q
    |||||||||    
T  47233778 aaatggagg 47233770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 31337806 - 31337757
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 145  Q
    ||||||||||||||||||||||||||| |||||| |||||||||| ||||    
T  31337806 ggtagcacctatagtagaaaagatggttgaaactaggcttaagtggtttg 31337757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 26490309 - 26490373
Alignment:
Q  88 agagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgt 152  Q
    ||||| ||||||||||||||||||||||||||||| |||| | |||||| ||| |||||| ||||    
T  26490309 agagttgaggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttggacatgt 26490373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 238 - 409
Target Start/End: Original strand, 35082993 - 35083171
Alignment:
Q  238 tgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttat 337  Q
    |||||| |||| ||| ||| ||||| ||| |||||||||||| |||||| |||||||||| ||||  || |||||  ||  ||||| ||| ||| |||||    
T  35082993 tgttacaaaatcaagaaaaatgttagtaaataaatttagtaatatttgaacaattgttagataaaacccttgttagaaatgagctttagttacaatttat 35083092  T
Q  338 agtattatcaataacatttaaaaactgttacata-------tttatatttttgtaacactttttgtattactagtaaca 409  Q
    |||||||||  | ||||||||||| ||| ||| |        ||||||| ||||||||||||||| || ||||||||||    
T  35083093 agtattatctctgacatttaaaaagtgtcacaaaacaaaatgttatattattgtaacactttttgcatcactagtaaca 35083171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 39601011 - 39600930
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagagag----tcgaggtagcacctatagtagaaaagatggtggaaa 127  Q
    ||||||||||| ||||||||||| ||||| || |||||||||    | | ||||| ||||||||||||||||||||||||||    
T  39601011 aagactagatgggataagattagaaatgacaacattagagagagagttggggtagtacctatagtagaaaagatggtggaaa 39600930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 202
Target Start/End: Complemental strand, 42510341 - 42510190
Alignment:
Q  50 aagactagatgagataagattaggaat-gaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggat 148  Q
    ||||||||||| |||| | |||| ||| || |||| ||| |||| | | |||||||||||||||||||||| ||||||| | |||||| ||| ||||||     
T  42510341 aagactagatgggataggtttagaaattgataatactagggagttgggatagcacctatagtagaaaagatagtggaaaataggcttaggtggtttggac 42510242  T
Q  149 atgtggagaggagatccgtagattttgtagttagaagggtagatcaaatggagg 202  Q
    ||||  |||| ||| |  |||||||||| || || || |||||||| |||||||    
T  42510241 atgt--agagaagacctatagattttgtggtaaggagagtagatcagatggagg 42510190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 51447990 - 51447884
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 195  Q
    |||||||||||||||||||||| |||| |||| | ||||||  |  |||||  |||| ||||| ||||||||||||   || || ||||| |||||||||    
T  51447990 ggtagcacctatagtagaaaagttggtagaaaataggcttagatagtttgggcatgtagagagaagatccgtagatgccgtggtaagaagagtagatcaa 51447891  T
Q  196 atggagg 202  Q
    |||||||    
T  51447890 atggagg 51447884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 55244266 - 55244332
Alignment:
Q  62 gataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaac 128  Q
    ||||||||||| ||||| || |||||||||| |  | | ||||||||||||||||||||||||||||    
T  55244266 gataagattagtaatgacaacattagagagttggtgcaacacctatagtagaaaagatggtggaaac 55244332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 171
Target Start/End: Original strand, 35033138 - 35033223
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagat 171  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||| ||||||||    
T  35033138 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttatatggtttggacatgtagagagaagacccgtagat 35033223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 22065 - 22180
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||| ||||||||   || || |||||    
T  22065 agagagtgggggtagcacctatagtagaaaagttggtagaaa-taggcttagatggtttggacatgtagagagaagacccgtagatgccgttgtaagaag 22163  T
Q  186 ggtagatcaaatggagg 202  Q
     |||||| |||||||||    
T  22164 agtagattaaatggagg 22180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 231 - 360
Target Start/End: Original strand, 2179935 - 2180066
Alignment:
Q  231 tgaaaactgttactaaataaaggaaat--tgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagta 328  Q
    |||||| ||||||||||||||  |||   ||||| | ||||||||||| | ||||||| ||||| || |||||| ||| |||||||||| ||||| |||     
T  2179935 tgaaaattgttactaaataaaaaaaaaaatgttaatgattaaatttagaatcatttgaacaattcttgggtaaattccctgttactaaagagctttagtt 2180034  T
Q  329 acactttatagtattatcaataacatttaaaa 360  Q
    | | |||||||| |||||  ||||||| ||||    
T  2180035 atattttatagtgttatctttaacattcaaaa 2180066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 5168824 - 5168940
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||| ||||||||| |||| |||| |  |||||  || |||| | |||| ||||| ||| ||||||||   || ||||||||    
T  5168824 agagagtgggggtagcacctatggtagaaaagttggtagaaaatacgcttagatggtttgaacatgtagagagaagacccgtagatgccgttgttagaag 5168923  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  5168924 agtagatcaaatggagg 5168940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 259 - 355
Target Start/End: Complemental strand, 27713501 - 27713405
Alignment:
Q  259 gttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacatt 355  Q
    |||||||||||||||||||||||||| |  |||||||||| |||  |  |||||||||| || || || || | ||||||||||||| | |||||||    
T  27713501 gttactaattaaatttagtaacatttaaataattgttaggcaaaacctatgttactaaatagttttagcaatattttatagtattattagtaacatt 27713405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 38430838 - 38430890
Alignment:
Q  84 ttagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggctta 136  Q
    |||||| || ||||||||||||||||||||||||||||| |||| | ||||||    
T  38430838 ttagagcgttgaggtagcacctatagtagaaaagatggtagaaaataggctta 38430890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 49503844 - 49503784
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    |||||||  |||||||||||||||||||||||||||| |||| | |||||| ||| |||||    
T  49503844 agagagttcaggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgg 49503784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 19737002 - 19737105
Alignment:
Q  99 agcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatg 198  Q
    |||||||||||||||||||||||| |||| | || ||| ||| ||||   |||  ||||| ||| | |||||| ||||||| ||||| |||||||| |||    
T  19737002 agcacctatagtagaaaagatggtagaaaataggtttaggtggtttgagcatgcagagagaagacctgtagatgttgtagtaagaagagtagatcagatg 19737101  T
Q  199 gagg 202  Q
    ||||    
T  19737102 gagg 19737105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 202
Target Start/End: Original strand, 19757905 - 19758008
Alignment:
Q  99 agcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatg 198  Q
    |||||||||||||||||||||||| |||| | || ||| ||| ||||   |||  ||||| ||| | |||||| ||||||| ||||| |||||||| |||    
T  19757905 agcacctatagtagaaaagatggtagaaaataggtttaggtggtttgagcatgcagagagaagacctgtagatgttgtagtaagaagagtagatcagatg 19758004  T
Q  199 gagg 202  Q
    ||||    
T  19758005 gagg 19758008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 50960922 - 50960863
Alignment:
Q  87 gagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    |||||| | ||||||||||||||||||||||||||| |||| | |||||| ||| |||||    
T  50960922 gagagttggggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgg 50960863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 54365287 - 54365225
Alignment:
Q  67 gattaggaatgaaaatattagagag--tcgaggtagcacctatagtagaaaagatggtggaaa 127  Q
    |||||| ||||||||||||||||||  | | ||||||||||||||||||||| |||| |||||    
T  54365287 gattagaaatgaaaatattagagagagttggggtagcacctatagtagaaaatatggcggaaa 54365225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 54128380 - 54128430
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||||||||||||||||||||||||| |||| | |||||| ||| |||||    
T  54128380 ggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgg 54128430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Complemental strand, 34719362 - 34719321
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaa 127  Q
    ||||||| | |||||||||||| |||||||||||||||||||    
T  34719362 agagagttggggtagcacctatcgtagaaaagatggtggaaa 34719321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 39535733 - 39535680
Alignment:
Q  83 attagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggctta 136  Q
    |||||||||| | || | |||||||||||||||||||||| ||||| |||||||    
T  39535733 attagagagttggggcaacacctatagtagaaaagatggtagaaacccggctta 39535680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 139
Target Start/End: Complemental strand, 44443470 - 44443441
Alignment:
Q  110 tagaaaagatggtggaaactcggcttaagt 139  Q
    ||||||||||||||||||||||||||||||    
T  44443470 tagaaaagatggtggaaactcggcttaagt 44443441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 3987039 - 3987099
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||||| | |||| |||||||||||||||||||||| |||||| | |||| ||| |||||    
T  3987039 agagagttggggtatcacctatagtagaaaagatggtagaaactagacttaggtggtttgg 3987099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 29374941 - 29375041
Alignment:
Q  101 cacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatgga 200  Q
    ||||||| | |||||||||||| |||||||| |||| |||||||||   ||| ||||  ||| | |||||||||||||| || || |||||| | |||||    
T  29374941 cacctattggagaaaagatggtagaaactcgacttaggtgatttgggcttgtagagaaaagacctgtagattttgtagtaaggagtgtagattagatgga 29375040  T
Q  201 g 201  Q
    |    
T  29375041 g 29375041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 38060423 - 38060539
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | ||||||||||||| |||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||| | ||||||   || || |||||    
T  38060423 agagagtgggggtagcacctataatagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacctgtagatgccgtcgtaagaag 38060522  T
Q  186 ggtagatcaaatggagg 202  Q
     |||||| |||||||||    
T  38060523 agtagattaaatggagg 38060539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 110 - 202
Target Start/End: Original strand, 39235154 - 39235246
Alignment:
Q  110 tagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatggagg 202  Q
    ||||||||||||| |||| | |||||| ||| |||||  |||| ||||| ||| | |||||| |||||||  |||| |||||||| |||||||    
T  39235154 tagaaaagatggtagaaaataggcttaggtggtttgggcatgtagagagaagacctgtagatgttgtagtacgaagagtagatcagatggagg 39235246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 97 - 129
Target Start/End: Original strand, 49841622 - 49841654
Alignment:
Q  97 gtagcacctatagtagaaaagatggtggaaact 129  Q
    |||||||||||| ||||||||||||||||||||    
T  49841622 gtagcacctatattagaaaagatggtggaaact 49841654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 6e-42; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 291 - 480
Target Start/End: Original strand, 48465443 - 48465633
Alignment:
Q  291 ttgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacatttaaaaactgttacatatttatatttttgtaacact 390  Q
    |||||||||||| |  |||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||    
T  48465443 ttgttaggtaaaatttgtgttactaaaaagtttcagtaacattttatagtattatcagtaacatttaaaaacagttacatatttatatttttgcaacact 48465542  T
Q  391 ttttgtattactagtaacat--nnnnnnntgtcacatatttataatttgagaagttgtaaaaaactgtcgcaaagttgtctagaataaaaat 480  Q
    ||||||||||||||| ||||         ||| |||| |||||||||||||||||||| ||||| ||| |||||| |||||| | |||||||    
T  48465543 ttttgtattactagtgacataaaaaaaaatgtaacatttttataatttgagaagttgt-aaaaattgttgcaaagctgtctatactaaaaat 48465633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 268 - 398
Target Start/End: Original strand, 21317485 - 21317612
Alignment:
Q  268 taaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacatttaaaaactgtta 367  Q
    ||||||||||||||||| | |||||||||||||||| | |||||||||||| |||||| ||||| ||||| |||||| |||||||||| ||||| |||||    
T  21317485 taaatttagtaacatttcaacaattgttaggtaaaggctgtgttactaaaatgcttcactaacattttattgtattaccaataacattcaaaaagtgtta 21317584  T
Q  368 catatttatatttttgtaacactttttgtat 398  Q
    |   |||||||||||||||||||||||||||    
T  21317585 c---tttatatttttgtaacactttttgtat 21317612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 223 - 397
Target Start/End: Complemental strand, 24559093 - 24558918
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    ||||||||| |||| ||| ||||||| ||| ||| ||||||||||||||||||||||||||||| | |||||||||||| | | ||||||||||| |  |    
T  24559093 gtaacaattaaaaaatgtaactaaatcaagaaaaatgttactaattaaatttagtaacatttgaacgattgttaggtaacggctgtgttactaaagaatt 24558994  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaactgttacatatttata-tttttgtaacactttttgta 397  Q
    | ||| | | ||||||||||||||| ||||||| | ||| |||||| | |||||| |||||| |||||||||||||    
T  24558993 ttagtgatattttatagtattatcagtaacattcataaattgttacttgtttatattttttggaacactttttgta 24558918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 225 - 409
Target Start/End: Complemental strand, 1685048 - 1684863
Alignment:
Q  225 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 324  Q
    |||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||| | |||| | || |||||||||| ||||||||||||||||||| || ||     
T  1685048 aacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaattttgcaacactcgaacaattgttagataaagtccgtgttactaaagagtttt 1684949  T
Q  325 agtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    ||| ||| ||||||||||||||  ||||| ||||||| |||  || || ||| | | |||||||||||||||||| ||||||||||    
T  1684948 agttacaatttatagtattatctgtaacaattaaaaagtgtcgcaaatgttacaatattgtaacactttttgtatcactagtaaca 1684863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 225 - 409
Target Start/End: Original strand, 1152048 - 1152233
Alignment:
Q  225 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 324  Q
    |||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||| | |||| |  | |||||||||| ||||||||||||||||||| || ||     
T  1152048 aacacttgaaaattgtaactaaattaagaaaaatgttactaattaaattttgcaacactcaaacaattgttagataaagtccgtgttactaaagagtttt 1152147  T
Q  325 agtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    ||| ||| |||||| |||||||  ||||| ||||||| |||  || || ||| ||| |||||||||||||||||| ||||||||||    
T  1152148 agttacagtttataatattatctgtaacaattaaaaagtgtctcaaatgttacattattgtaacactttttgtatcactagtaaca 1152233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 223 - 409
Target Start/End: Complemental strand, 47066132 - 47065945
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||| ||||||||||||||||||  ||| |||||||||||||||| ||||||||| ||| || |    
T  47066132 gtaacacttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagtaacacctgaacaattgttaggtaaagcccgtgttaccaaagagtt 47066033  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    | ||| ||| ||||||||| ||||  ||||| | ||||| |||  || || ||| | | |||||||||||||||||| ||||||||||    
T  47066032 ttagttacattttatagtactatccgtaacaatcaaaaagtgtcgcaaatgttacactattgtaacactttttgtataactagtaaca 47065945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 223 - 317
Target Start/End: Complemental strand, 4881167 - 4881073
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 317  Q
    |||||| ||||||| ||||||||||| ||| ||| ||||||| |||||||||||||| |||||   |||||||||||||||||||||||||||||    
T  4881167 gtaacacttgaaaattgttactaaatcaagaaaaatgttactgattaaatttagtaatatttgtataattgttaggtaaagtccgtgttactaaa 4881073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 223 - 346
Target Start/End: Original strand, 43600269 - 43600392
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||||||||||||||| || | |||| |||||||||||||||| |||||||||||||  | |    
T  43600269 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaaaacttgaacaattgttaggtaaagcccgtgttactaaagtgtt 43600368  T
Q  323 tcagtaacactttatagtattatc 346  Q
    | ||| ||| ||||||||| ||||    
T  43600369 ttagttacattttatagtactatc 43600392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 228 - 299
Target Start/End: Original strand, 48464047 - 48464118
Alignment:
Q  228 aattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggt 299  Q
    ||||||||| ||||||||||||||  ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  48464047 aattgaaaattgttactaaataaataaaaatgttactaattaaatttagtaacatttgaacaattgttaggt 48464118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 258 - 398
Target Start/End: Complemental strand, 37751053 - 37750913
Alignment:
Q  258 tgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacattta 357  Q
    |||||||||||||| | |||||||||||  |||||||||| ||||| |  ||||||||| |||||| ||| ||| |||||||||||||| || ||||| |    
T  37751053 tgttactaattaaaatcagtaacatttgcgcaattgttagataaagccaatgttactaagaagctttagttacattttatagtattatctat-acattca 37750955  T
Q  358 aaaactgttacatat-ttatatttttgtaacactttttgtat 398  Q
    |||| |||  || || ||| ||| ||||||||||||||||||    
T  37750954 aaaaatgtcgcaaatgttacattattgtaacactttttgtat 37750913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 242 - 346
Target Start/End: Complemental strand, 21539350 - 21539247
Alignment:
Q  242 actaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagta 341  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||| | |||||||||| | |||||| |||||||||| || || ||| ||| ||| |||||    
T  21539350 actaaatcaaggaaaatgttactgattaaatttagtaacatttaaacaattgttagat-aagtccttgttactaaagagatttagttacattttttagta 21539252  T
Q  342 ttatc 346  Q
    |||||    
T  21539251 ttatc 21539247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 201
Target Start/End: Original strand, 54470199 - 54470314
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||||||||||||||| | |||||||| |||||  |||| ||||| |||   ||| ||| |||||| || ||    
T  54470199 agagagttggggtagcacctatagtagaaaagatggtggaaactagacttaagtggtttgggcatgtagagagaagacatgtaaattatgtagtaaggag 54470298  T
Q  186 ggtagatcaaatggag 201  Q
     ||| |||||||||||    
T  54470299 agtaaatcaaatggag 54470314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 223 - 317
Target Start/End: Complemental strand, 4904238 - 4904144
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 317  Q
    |||||| || |||| ||||||||||| | | ||| ||||||| ||||||||||||||||||||  ||||||||||||||||  | ||||||||||    
T  4904238 gtaacacttaaaaattgttactaaatcatgaaaaatgttactgattaaatttagtaacatttgtacaattgttaggtaaagcacttgttactaaa 4904144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 86 - 200
Target Start/End: Original strand, 37797844 - 37797958
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| |||||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| |||| |||||||   || || |||||    
T  37797844 agagagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagattcgtagatgccgtcgtaagaag 37797943  T
Q  186 ggtagatcaaatgga 200  Q
     ||||||||||||||    
T  37797944 agtagatcaaatgga 37797958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 97 - 201
Target Start/End: Complemental strand, 22420993 - 22420889
Alignment:
Q  97 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaa 196  Q
    |||||| || |||| ||||||||||||||| || |||||| |||||||||| |||| ||||| ||||| | |||||||||| | ||||| |||||| | |    
T  22420993 gtagcaactgtagtggaaaagatggtggaagctaggcttaggtgatttggacatgtagagagaagatctgaagattttgtaataagaagagtagataaga 22420894  T
Q  197 tggag 201  Q
    |||||    
T  22420893 tggag 22420889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 97 - 152
Target Start/End: Complemental strand, 42293528 - 42293473
Alignment:
Q  97 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgt 152  Q
    |||||||||||||||||||||||| ||||||||||||||| ||| ||||| |||||    
T  42293528 gtagcacctatagtagaaaagatgatggaaactcggcttaggtggtttgggtatgt 42293473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 43070082 - 43070015
Alignment:
Q  62 gataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaact 129  Q
    |||| |||||| ||||| || |||||||||| |||||||| ||||||||||||| |||||||||||||    
T  43070082 gataggattagaaatgacaacattagagagttgaggtagcgcctatagtagaaatgatggtggaaact 43070015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 223 - 346
Target Start/End: Original strand, 53300353 - 53300476
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| | ||||| ||| ||| ||||| ||||||||||||||||||  | | |||||||||||||||| ||||||||| ||| || |    
T  53300353 gtaacacttgaaaattgtaattaaatcaagaaaaatgttagtaattaaatttagtaacacctaaacaattgttaggtaaagcccgtgttaccaaagagtt 53300452  T
Q  323 tcagtaacactttatagtattatc 346  Q
    | ||| ||| ||||| ||| ||||    
T  53300453 ttagttacattttatcgtactatc 53300476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 31459024 - 31459082
Alignment:
Q  88 agagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||||||||||||||||||||||||||||||||| |||| | |||||| ||| |||||    
T  31459024 agagtcgaggtagcacctatagtagaaaagatggtagaaaataggcttaggtggtttgg 31459082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 41192828 - 41192921
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagt 179  Q
    ||||||| | ||||||||||| |||||||||||||||||||||| | |||| ||||||||   |||| ||||| ||| | ||||||| ||||||    
T  41192828 agagagttggggtagcacctacagtagaaaagatggtggaaactagacttaggtgatttgtgcatgtagagagaagacctgtagattctgtagt 41192921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 49738884 - 49738835
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 145  Q
    |||||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  49738884 ggtagcacctattgtagaaaagatggtagaaactcggcttaggtgatttg 49738835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 50 - 136
Target Start/End: Complemental strand, 51252789 - 51252701
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagagag--tcgaggtagcacctatagtagaaaagatggtggaaactcggctta 136  Q
    ||||||||| |||||| |||||| |||||  | |||||||||  | | |||||||||| ||||||||||||||||||||||| ||||||    
T  51252789 aagactagacgagataggattagaaatgactacattagagagagttggggtagcacctctagtagaaaagatggtggaaactaggctta 51252701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 436221 - 436337
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  ||||||||  |||| ||||| ||| | ||||||   || || |||||    
T  436221 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagacctgtagatgccgtggtaagaag 436320  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  436321 agtagatcaaatggagg 436337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 31960104 - 31959988
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  31960104 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 31960005  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  31960004 agtagatcaaatggagg 31959988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 48174383 - 48174267
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||| ||||||||||||||||| |||| |||| | ||||||  ||||||||  |||| ||||| ||| ||||||||   || || |||||    
T  48174383 agagagtgggggtaacacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagacccgtagatgccgtggtaagaag 48174284  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  48174283 agtagatcaaatggagg 48174267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 52569805 - 52569689
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  52569805 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 52569706  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  52569705 agtagatcaaatggagg 52569689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 53707786 - 53707902
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| |||||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  53707786 agagagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 53707885  T
Q  186 ggtagatcaaatggagg 202  Q
     ||| ||||||||||||    
T  53707886 agtatatcaaatggagg 53707902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 10208990 - 10209061
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatgg 121  Q
    ||||||||||| ||||  ||||| ||||| || |||||||||| | ||||| ||||||||||||||||||||    
T  10208990 aagactagatgggatagaattagaaatgacaacattagagagttggggtagaacctatagtagaaaagatgg 10209061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 86 - 201
Target Start/End: Complemental strand, 27450469 - 27450354
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || ||| || |||| ||||| ||| ||||||||   || || |||||    
T  27450469 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggttttgacatgtagagagaagacccgtagatgccgttgtaagaag 27450370  T
Q  186 ggtagatcaaatggag 201  Q
     |||||||||||||||    
T  27450369 agtagatcaaatggag 27450354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 50 - 129
Target Start/End: Original strand, 45423571 - 45423650
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaact 129  Q
    ||||||||| | ||||  ||||| ||||| || |||| ||||| ||||||||||||||| ||||||||||||| ||||||    
T  45423571 aagactagacgggatagaattagaaatgacaacattatagagttgaggtagcacctataatagaaaagatggtagaaact 45423650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 42639296 - 42639238
Alignment:
Q  100 gcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagag 158  Q
    |||||||||||||||||||||||||||||  |||||| ||| |||||| |||| |||||    
T  42639296 gcacctatagtagaaaagatggtggaaaccaggcttaggtggtttggacatgtagagag 42639238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 224 - 281
Target Start/End: Complemental strand, 26075347 - 26075290
Alignment:
Q  224 taacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaaca 281  Q
    ||||||||||||| |||||||| || ||| |||| |||||||| ||||||||||||||    
T  26075347 taacaattgaaaattgttactagatcaagaaaatggttactaagtaaatttagtaaca 26075290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 33709916 - 33710009
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagt 179  Q
    ||||||| | |||| ||||||||||||||||||||||||||||| || ||| ||| ||| |  |||||||||| ||| | || |||| ||||||    
T  33709916 agagagttggggtaacacctatagtagaaaagatggtggaaactaggtttaggtggtttaggcatgtggagagaagaactgtggattctgtagt 33710009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 4440845 - 4440961
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | || ||||||||||||||||||| |||| |||| | ||||||  || |||||  || | ||||| ||| ||||||||  ||| || |||||    
T  4440845 agagagtgggggcagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatctagagagaagacccgtagatgctgtggtaagaag 4440944  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  4440945 agtagatcaaatggagg 4440961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 53 - 129
Target Start/End: Original strand, 30807549 - 30807625
Alignment:
Q  53 actagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaact 129  Q
    |||||||| ||||  |||||||||||  | || ||||||| || ||||||| |||||||||||||||||| ||||||    
T  30807549 actagatgtgatagaattaggaatgacgacataagagagttgatgtagcacatatagtagaaaagatggtagaaact 30807625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 192
Target Start/End: Complemental strand, 35555927 - 35555831
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagat 192  Q
    ||||||||||||||||||||||||||| |||||| | |||| ||| |||||  || | ||||| ||| | || |||| ||||||||| || ||||||    
T  35555927 ggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgggcatttagagagaagacctgtggattctgtagttaggagagtagat 35555831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 43433916 - 43434032
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  43433916 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 43434015  T
Q  186 ggtagatcaaatggagg 202  Q
     ||| ||||||||||||    
T  43434016 agtaaatcaaatggagg 43434032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 50471518 - 50471578
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||| ||| ||||||||  |||||||||||||||||||||||| || ||||||| |||||    
T  50471518 agagactcggggtagcactaatagtagaaaagatggtggaaactaggtttaagtggtttgg 50471578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 606
Target Start/End: Original strand, 21607449 - 21607516
Alignment:
Q  539 gtattttgctttaacatattttcatctagttggttaatcatgaagtgtgattctgtttgcagcctaag 606  Q
    ||||||||||| | ||||||||||| ||| |  |||||||||| || |||||||||||||| ||||||    
T  21607449 gtattttgcttgaccatattttcatttagctaattaatcatgaggtatgattctgtttgcaacctaag 21607516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 38904000 - 38903917
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagt 179  Q
    ||||||||| ||  |||||||||||||||||||||||||||  || ||||   |||||||||| |||   ||||||||||||||    
T  38904000 ggtagcaccgatcatagaaaagatggtggaaactcggcttagttggtttgagcatgtggagagaagacttgtagattttgtagt 38903917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 86 - 136
Target Start/End: Original strand, 28236175 - 28236225
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggctta 136  Q
    ||||||| | |||||||||||||||||||||| ||||||||| | ||||||    
T  28236175 agagagtgggggtagcacctatagtagaaaagttggtggaaaataggctta 28236225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 146
Target Start/End: Complemental strand, 30621484 - 30621434
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    |||||||| ||||||||||||||||||||||| | || ||| |||||||||    
T  30621484 ggtagcacttatagtagaaaagatggtggaaaataggtttaggtgatttgg 30621434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 86 - 152
Target Start/End: Complemental strand, 44047638 - 44047572
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgt 152  Q
    ||||||| | |||||||||||||||||||||| |||| ||| || |||||| ||| |||||| ||||    
T  44047638 agagagttggggtagcacctatagtagaaaaggtggtagaatctaggcttaggtggtttggacatgt 44047572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 26075295 - 26075222
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgtta 296  Q
    ||||||||  |||| ||||| || || ||| ||||||||||||| ||||||| |||||||| || |||||||||    
T  26075295 gtaacaataaaaaattgttattagatcaagaaaattgttactaagtaaattttgtaacattcgaacaattgtta 26075222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 346
Target Start/End: Complemental strand, 27739807 - 27739750
Alignment:
Q  289 aattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatc 346  Q
    ||||||||||||||| || ||||||| || ||||| ||| ||| ||||||||||||||    
T  27739807 aattgttaggtaaagcccatgttactgaagagctttagttacattttatagtattatc 27739750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 136
Target Start/End: Complemental strand, 46715649 - 46715612
Alignment:
Q  99 agcacctatagtagaaaagatggtggaaactcggctta 136  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  46715649 agcacctattgtagaaaagatggtggaaactaggctta 46715612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 49987435 - 49987480
Alignment:
Q  101 cacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||||||||||||||||||||||||| | |||||| ||| |||||    
T  49987435 cacctatagtagaaaagatggtggaaaataggcttaggtggtttgg 49987480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 3254092 - 3254165
Alignment:
Q  58 atgagataagattaggaatgaaaatatta----gagagtcgaggtagcacctatagtagaaaagatggtggaaa 127  Q
    |||||||| |||||| |||||||||||||    || ||| | |||||||||| |||||||||||||| ||||||    
T  3254092 atgagatatgattagaaatgaaaatattaataagaaagttgtggtagcacctttagtagaaaagatgatggaaa 3254165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 28497482 - 28497597
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||| ||||||||||||| |||||||   |||||| ||| |||||  |||| ||||| |||   ||||||| |||||| || ||    
T  28497482 agagagttggggtagcacctttagtagaaaagattgtggaaa-aaggcttaggtggtttgggcatgtagagagaagacttgtagattatgtagtaaggag 28497580  T
Q  186 ggtagatcaaatggagg 202  Q
     |||||||| |||||||    
T  28497581 agtagatcagatggagg 28497597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 31403296 - 31403257
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggctta 136  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  31403296 ggtagcacctatagtagaaaa-atggtggaaactaggctta 31403257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 6e-36; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 225 - 409
Target Start/End: Complemental strand, 9242580 - 9242395
Alignment:
Q  225 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 324  Q
    |||| ||||||| ||| ||||||| ||| ||||||||||||||||||||| |||||| |||| |||||||||| |||||||| |||||||||| || ||     
T  9242580 aacacttgaaaattgtaactaaatcaagaaaattgttactaattaaattttgtaacacttgaacaattgttagataaagtccatgttactaaagagtttt 9242481  T
Q  325 agtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    ||| ||| |||||||||||||| |||||| ||||||| |||  || || ||| ||| |||||||||||||||||| |||| |||||    
T  9242480 agttacattttatagtattatctataacaattaaaaagtgtcgcaaatgttacattattgtaacactttttgtatcactattaaca 9242395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 223 - 345
Target Start/End: Original strand, 30089737 - 30089859
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||||||||||||||| ||| ||| ||||||| |||| |||||||||||||||| ||||||||||| |||| || |||||||||| ||||    
T  30089737 gtaacacttgaaaactgttactaaatcaagaaaaatgttactgattatatttagtaacatttgaacaattgttaggaaaagcccatgttactaaagagct 30089836  T
Q  323 tcagtaacactttatagtattat 345  Q
    | ||| ||| |||||||||||||    
T  30089837 ttagttacattttatagtattat 30089859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 273 - 393
Target Start/End: Original strand, 26701083 - 26701201
Alignment:
Q  273 ttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataacatttaaaaactgttacatat 372  Q
    ||||||||| ||| ||||||||||||||||| ||||||||||||| | ||||||||||||||||| ||||||| | ||||||| | ||| |||| |||||    
T  26701083 ttagtaacagttggccaattgttaggtaaagcccgtgttactaaataacttcagtaacactttat-gtattattagtaacattcagaaaatgttgcatat 26701181  T
Q  373 ttatatttttgtaacactttt 393  Q
    ||||| |||||||||||||||    
T  26701182 ttata-ttttgtaacactttt 26701201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 223 - 361
Target Start/End: Original strand, 3234329 - 3234467
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaa-ttgttaggtaaagtccgtgttactaaaaagc 321  Q
    |||||| ||||||| ||| ||||||||||  ||| || |||||| | ||||||||||||||||||||| || |||||||||||||||||||||||| |||    
T  3234329 gtaacagttgaaaaatgtaactaaataaaaaaaaatggtactaaattaatttagtaacatttgaccaatttattaggtaaagtccgtgttactaaatagc 3234428  T
Q  322 ttcagtaacactttatagtattatcaataacatttaaaaa 361  Q
    |||||||||| ||||  ||||||| | ||||||| |||||    
T  3234429 ttcagtaaca-tttaatgtattattagtaacattcaaaaa 3234467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 223 - 361
Target Start/End: Complemental strand, 26621189 - 26621051
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||||||||||| ||| ||| ||||||| ||||||||||| ||||||| | |||||||||| ||||  || |||||||||| ||||    
T  26621189 gtaacacttgaaaattgttactaaattaagaaaaatgttactgattaaatttagcaacatttaaacaattgttagataaaagccatgttactaaagagct 26621090  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaa 361  Q
    | ||| ||| ||||||||||||||  ||||||| |||||    
T  26621089 ttagttacattttatagtattatctgtaacattcaaaaa 26621051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 223 - 353
Target Start/End: Complemental strand, 26608637 - 26608507
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| |||||  |||| ||| ||| ||||||| ||||||||||||||||||||| |||||||||| ||||| || |||||||||| ||||    
T  26608637 gtaacatttgaaaattgttatgaaatcaagaaaaatgttactgattaaatttagtaacatttgaacaattgttagataaagcccatgttactaaagagct 26608538  T
Q  323 tcagtaacactttatagtattatcaataaca 353  Q
    | |||  || ||||||||| |||| ||||||    
T  26608537 ttagttgcattttatagtactatctataaca 26608507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 258 - 345
Target Start/End: Original strand, 16086524 - 16086611
Alignment:
Q  258 tgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattat 345  Q
    |||||||||||||||||| ||||||||||  |||||||||||||||  | ||||||| || ||||||||||||| |||||||||||||    
T  16086524 tgttactaattaaatttaataacatttgaataattgttaggtaaagctcatgttacttaatagcttcagtaacattttatagtattat 16086611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 223 - 346
Target Start/End: Complemental strand, 4685501 - 4685378
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||| ||||||||||||| |||| |||| |||||||||||||||| |||| ||||||||  | |    
T  4685501 gtaacacttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagcaacacttgaacaattgttaggtaaagcccgtattactaaagtgtt 4685402  T
Q  323 tcagtaacactttatagtattatc 346  Q
    | ||| ||| ||||||||| ||||    
T  4685401 ttagttacattttatagtactatc 4685378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 50 - 144
Target Start/End: Complemental strand, 30200289 - 30200195
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgattt 144  Q
    |||| |||||| |||| |||||| ||||| || ||||||||||   |||| ||||||||||||||||||||||||||||| |||||| |||||||    
T  30200289 aagattagatgggatatgattagaaatgacaacattagagagttagggtaacacctatagtagaaaagatggtggaaactaggcttaggtgattt 30200195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 50 - 201
Target Start/End: Original strand, 33072906 - 33073059
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagagag--tcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgga 147  Q
    |||||||||  ||||| |||||||||||| |  |||||||||  | | |||||||||||||||||||||| |||| |||| | ||||||  ||||||||     
T  33072906 aagactagacaagataggattaggaatgacaccattagagagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatgatttggg 33073005  T
Q  148 tatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatggag 201  Q
     |||| ||||| ||| |||||||| | || || ||||| |||||||||||||||    
T  33073006 catgtagagagaagacccgtagatgtcgtggtaagaagagtagatcaaatggag 33073059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 224 - 317
Target Start/End: Complemental strand, 26225075 - 26224982
Alignment:
Q  224 taacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 317  Q
    ||||| ||||||| ||| ||||||| ||| ||| || ||||||||||||||||||||| |||| ||||| |||||||||| | |||||||||||    
T  26225075 taacacttgaaaattgtaactaaatcaagaaaaatgatactaattaaatttagtaacacttgaacaattattaggtaaagccggtgttactaaa 26224982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 223 - 346
Target Start/End: Complemental strand, 20277458 - 20277335
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| | ||||| ||| ||||||| ||  ||| | ||| ||||||||||||||||||||| | ||||||||||||||||  | |||||||||| ||||    
T  20277458 gtaacactcgaaaattgtaactaaatcaaaaaaaatattattaattaaatttagtaacatttaaacaattgttaggtaaagcacctgttactaaagagct 20277359  T
Q  323 tcagtaacactttatagtattatc 346  Q
    | ||| ||| | ||||||||||||    
T  20277358 ttagttacattatatagtattatc 20277335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 223 - 317
Target Start/End: Original strand, 10022126 - 10022220
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 317  Q
    |||||||||||||| ||| ||||||| |   ||| ||||||||||||| ||||||||||  ||| ||||||||||||||||  ||||||||||||    
T  10022126 gtaacaattgaaaattgtaactaaatcagaaaaaatgttactaattaagtttagtaacacatgaacaattgttaggtaaagctcgtgttactaaa 10022220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 38920796 - 38920846
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  38920796 ggtagcacctatagtagaaaagatggtggaaactaggcttaagtggtttgg 38920846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 213
Target Start/End: Original strand, 1740803 - 1740920
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 195  Q
    ||||||| ||| ||||||||| |||||||||||| |||||| ||| ||||| ||||| || ||||||   || ||||||||||| || || ||||||||     
T  1740803 ggtagcatctacagtagaaaatatggtggaaactaggcttaggtggtttgggtatgtagataggagaattgtggattttgtagtaaggagagtagatcag 1740902  T
Q  196 atggagggttgtccaatc 213  Q
    ||||||||| ||| ||||    
T  1740903 atggagggtagtcaaatc 1740920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 202
Target Start/End: Original strand, 38606969 - 38607112
Alignment:
Q  62 gataagattaggaatgaaaatatta---gagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagag 158  Q
    |||| |||||||||||| || ||||   |||||| | |||||||||||||||||||| | |||| |||| | ||||||  || |||||| |||| |||||    
T  38606969 gataggattaggaatgacaacattaagagagagtgggggtagcacctatagtagaaaggttggtagaaaataggcttagatggtttggacatgtagagag 38607068  T
Q  159 gagatccgtagattttgtagttagaagggtagatcaaatggagg 202  Q
     ||| ||||||||   || |||||||| ||||||||||||||||    
T  38607069 aagacccgtagatgccgttgttagaagagtagatcaaatggagg 38607112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 12841565 - 12841449
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| |||||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  12841565 agagagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 12841466  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  12841465 agtagatcaaatggagg 12841449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 13859298 - 13859182
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||  ||| || |||||    
T  13859298 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgctgtcgtaagaag 13859199  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  13859198 agtagatcaaatggagg 13859182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 55 - 202
Target Start/End: Complemental strand, 27893871 - 27893725
Alignment:
Q  55 tagatgagataagattaggaatgaaaatattagagag--tcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgt 152  Q
    |||||| |||| |||||| || || ||||||||||||  | |||||| |||||||||||||| |||||||||||| | |||||| ||| |||| | ||||    
T  27893871 tagatgtgataggattagaaacgacaatattagagagagttgaggtaacacctatagtagaatagatggtggaaaataggcttaggtggtttgaacatgt 27893772  T
Q  153 ggagaggagatccgtagattttgtagttagaagggtagatcaaatggagg 202  Q
     ||    ||||| |||||||||||| |||| || |||||||| |||||||    
T  27893771 aga---aagatctgtagattttgtacttaggagagtagatcagatggagg 27893725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 43281666 - 43281782
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||| ||||||||   || || |||||    
T  43281666 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgttgtaagaag 43281765  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  43281766 agtagatcaaatggagg 43281782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 45836770 - 45836654
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||| ||||||||   || || |||||    
T  45836770 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgttgtaagaag 45836671  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  45836670 agtagatcaaatggagg 45836654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 201
Target Start/End: Complemental strand, 19262723 - 19262609
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||| |||||||||||||| |||||| |||||| ||| ||||   |||| ||||| ||| | ||||| |||||||| |||||    
T  19262723 agagagttggggtagcacctattgtagaaaagatggtagaaacttggcttaggtggtttgagcatgtagagagaagacctgtaga-tttgtagtaagaag 19262625  T
Q  186 ggtagatcaaatggag 201  Q
     |||||||| ||||||    
T  19262624 agtagatcagatggag 19262609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 195
Target Start/End: Original strand, 12966025 - 12966123
Alignment:
Q  97 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 195  Q
    ||||||||||||| |||||||||||||||||||  ||||| ||| |||||  |||| ||||| ||| ||||| ||| |||||| || || |||||||||    
T  12966025 gtagcacctatagaagaaaagatggtggaaactatgcttaggtggtttgggcatgtagagagaagacccgtaaattctgtagtaaggagagtagatcaa 12966123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 39906650 - 39906544
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 195  Q
    |||||||||||||||||||||| |||| |||| | ||||||  ||||||||  |||| ||||| ||| || ||||| | || || ||||| |||||||||    
T  39906650 ggtagcacctatagtagaaaagttggtagaaaataggcttagatgatttgggcatgtagagagaagacccatagatgtcgtggtaagaagagtagatcaa 39906551  T
Q  196 atggagg 202  Q
    |||||||    
T  39906550 atggagg 39906544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 42187462 - 42187522
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||||||| ||||||||||||| |||||||||||||||||| | |||||| ||| |||||    
T  42187462 agagagtcggggtagcacctataatagaaaagatggtggaaaataggcttaggtggtttgg 42187522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 203
Target Start/End: Complemental strand, 48736229 - 48736072
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatatta----gagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 145  Q
    ||||||||||||||||| ||||| |||||  | ||||    |||||| | ||||||||||| ||||||||||||||  |||||| | |||| ||| ||||    
T  48736229 aagactagatgagataaaattagaaatgacgacattatagagagagttggggtagcacctacagtagaaaagatgggagaaactagacttaggtggtttg 48736130  T
Q  146 gatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatggaggg 203  Q
       |||| ||| | ||| | || |||| ||||||||| || |||||||||||||||||    
T  48736129 ctcatgtagagcgaagacctgtggattatgtagttaggagagtagatcaaatggaggg 48736072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 242 - 317
Target Start/End: Complemental strand, 26205494 - 26205419
Alignment:
Q  242 actaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 317  Q
    ||||||| ||| ||| |||||||||||||||||||||||| ||||  ||||| |||||||||   |||||||||||    
T  26205494 actaaatcaagaaaaatgttactaattaaatttagtaacacttgaaaaattggtaggtaaagctggtgttactaaa 26205419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 238 - 345
Target Start/End: Complemental strand, 26619186 - 26619080
Alignment:
Q  238 tgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttat 337  Q
    ||||||||||| ||| ||| ||||||| |||||||||| |||||||||| |||||| ||||||||  |  |||||||||| | ||| ||| ||| || ||    
T  26619186 tgttactaaatcaagaaaaatgttactgattaaatttattaacatttgaacaattg-taggtaaatcctatgttactaaagaactttagttacatttgat 26619088  T
Q  338 agtattat 345  Q
    ||||||||    
T  26619087 agtattat 26619080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 96 - 207
Target Start/End: Original strand, 40169651 - 40169762
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 195  Q
    |||||||| ||||||||||||||||||||||| | |||||| ||| |||||  |||| ||||  |||  ||||||||||||    || || |||||||||    
T  40169651 ggtagcacttatagtagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagataagacacgtagattttgtgtgaaggagagtagatcaa 40169750  T
Q  196 atggagggttgt 207  Q
    ||||||| ||||    
T  40169751 atggaggattgt 40169762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 42177305 - 42177255
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggctta 136  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||| ||||||    
T  42177305 agagagttgaggtatcacctatagtagaaaagatggtgaaaactaggctta 42177255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 46356136 - 46356030
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 195  Q
    |||||||||||||||||||||| |||| |||| | || |||  || |||||  |||| ||||| |||  ||||||| |||| || ||||| |||||||||    
T  46356136 ggtagcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtagagagaagacacgtagatgttgtggtaagaagagtagatcaa 46356037  T
Q  196 atggagg 202  Q
    |||||||    
T  46356036 atggagg 46356030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 171
Target Start/End: Complemental strand, 2886012 - 2885927
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagat 171  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||||||||||||    
T  2886012 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagatccgtagat 2885927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 258 - 315
Target Start/End: Original strand, 16170308 - 16170365
Alignment:
Q  258 tgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttacta 315  Q
    |||||||||||||||||||||||| || | ||||||||||||||| ||  ||||||||    
T  16170308 tgttactaattaaatttagtaacacttaaacaattgttaggtaaaatcaatgttacta 16170365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 171
Target Start/End: Complemental strand, 35906491 - 35906406
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagat 171  Q
    ||||||| |||||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||    
T  35906491 agagagtggaggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagat 35906406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 6374860 - 6374972
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || ||||   |||| ||||| ||| | ||||||  ||| || |||||    
T  6374860 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgagcatgtagagagaagaccagtagatgctgtggtaagaag 6374959  T
Q  186 ggtagatcaaatg 198  Q
    |||||||||||||    
T  6374960 ggtagatcaaatg 6374972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 27021982 - 27021922
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||||| | |||||||||||||||||||||| ||||| ||||| |||||| ||| |||||    
T  27021982 agagagttggggtagcacctatagtagaaaagttggtgaaaactaggcttaggtggtttgg 27021922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 29650376 - 29650492
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | || ||||||||||||||||||  |||| |||| | ||||||  || |||||| |||| ||||| ||| ||||||||   || || |||||    
T  29650376 agagagtgggggcagcacctatagtagaaaaattggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgttgtaagaag 29650475  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  29650476 agtagatcaaatggagg 29650492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 31005215 - 31005331
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | || |||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  31005215 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggtttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 31005314  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  31005315 agtagatcaaatggagg 31005331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 36514497 - 36514437
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||||| | ||||||||||||||||||||||||||| |||||| | |||| ||| |||||    
T  36514497 agagagttggggtagcacctatagtagaaaagatggtagaaactagacttaggtggtttgg 36514437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 43282400 - 43282460
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||||| | ||||||||||||||||||||||  |||||||||| |||||| |||| ||||    
T  43282400 agagagttggggtagcacctatagtagaaaagtcggtggaaactaggcttaggtgaattgg 43282460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 146
Target Start/End: Original strand, 47848666 - 47848726
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||||| | |||||| ||||||||||||||||||||||||| | |||||| ||| |||||    
T  47848666 agagagttggggtagcgcctatagtagaaaagatggtggaaaataggcttaggtggtttgg 47848726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 127
Target Start/End: Complemental strand, 26742176 - 26742145
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaa 127  Q
    ||||||||||||||||||||||||||||||||    
T  26742176 ggtagcacctatagtagaaaagatggtggaaa 26742145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 28020966 - 28021033
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagat 163  Q
    |||||||| ||| ||||||||||||||||||||| |||||| ||| |||||  |||| ||||| ||||    
T  28020966 ggtagcacttatcgtagaaaagatggtggaaacttggcttaggtggtttgggcatgtagagagaagat 28021033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 142
Target Start/End: Complemental strand, 40139246 - 40139153
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagagag--tcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgat 142  Q
    ||||||||| | ||||||||||| || || || |||||||||  ||| |||  |||||||||||||||| |||||||||||| |||||| |||||    
T  40139246 aagactagacgggataagattagaaaagacaacattagagagagtcg-ggtttcacctatagtagaaaatatggtggaaactgggcttaggtgat 40139153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 202
Target Start/End: Complemental strand, 31682882 - 31682776
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 195  Q
    |||||||| ||||||||||||| |||| |||| | ||||||  || ||||| ||||| ||||| ||| ||||||||   ||  | ||||| |||||||||    
T  31682882 ggtagcacatatagtagaaaagttggtagaaaataggcttagatggtttgggtatgtagagagaagacccgtagatgccgtcataagaagagtagatcaa 31682783  T
Q  196 atggagg 202  Q
    |||||||    
T  31682782 atggagg 31682776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 95 - 177
Target Start/End: Complemental strand, 36102046 - 36101964
Alignment:
Q  95 aggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgta 177  Q
    |||||||||||||| ||||||||||| |||||| | |||||| ||| |||||  |||| ||||| ||| |  |||||||||||    
T  36102046 aggtagcacctataatagaaaagatgttggaaaataggcttaggtggtttggggatgtagagagaagacctatagattttgta 36101964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 35559284 - 35559167
Alignment:
Q  86 agagagtcgaggtagcacct-atagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaa 184  Q
    ||||||| | |||||||||| |||||||||||| |||| |||| | ||||||  ||||||||| || | | ||| ||| || ||||| | || || ||||    
T  35559284 agagagtgggggtagcaccttatagtagaaaagttggtagaaaataggcttagatgatttggacatttagtgagaagacccctagatgtcgtggtaagaa 35559185  T
Q  185 gggtagatcaaatggagg 202  Q
    | ||||||||||||||||    
T  35559184 gagtagatcaaatggagg 35559167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 36136756 - 36136797
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaa 127  Q
    ||||||| | ||||||||||||||||||||||||||| ||||    
T  36136756 agagagttggggtagcacctatagtagaaaagatggtagaaa 36136797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 37617936 - 37618053
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggt-ggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaa 184  Q
    ||||||| | |||||||||||||||||||||| |||| | ||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || ||||    
T  37617936 agagagtgggggtagcacctatagtagaaaagttggtagaaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaa 37618035  T
Q  185 gggtagatcaaatggagg 202  Q
    | ||||||||||||||||    
T  37618036 gagtagatcaaatggagg 37618053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 41948519 - 41948568
Alignment:
Q  97 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||||| || | |||||||||||||||||||| |||||||||| |||||    
T  41948519 gtagcacttacaatagaaaagatggtggaaactaggcttaagtggtttgg 41948568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 171
Target Start/End: Original strand, 49029268 - 49029353
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagat 171  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||    
T  49029268 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagat 49029353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 277 - 345
Target Start/End: Original strand, 27135985 - 27136053
Alignment:
Q  277 taacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattat 345  Q
    |||||||||| |||||||||| ||||| | ||||||||||| || ||| |||||| ||| | |||||||    
T  27135985 taacatttgaacaattgttagataaagcctgtgttactaaagagtttcggtaacagtttttggtattat 27136053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 86 - 138
Target Start/End: Original strand, 32630586 - 32630638
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaag 138  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||||    
T  32630586 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttaag 32630638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 33350096 - 33349980
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | ||| |||||||||||||||||| || | |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  33350096 agagagtgggggttgcacctatagtagaaaagttgctagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 33349997  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  33349996 agtagatcaaatggagg 33349980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 225 - 409
Target Start/End: Original strand, 12189956 - 12190139
Alignment:
Q  225 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 324  Q
    ||||||| |||| ||| ||||||| ||| ||| | ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| || ||     
T  12189956 aacaattaaaaaatgtaactaaatcaagaaaaatattactaattaaatttagtaacatttgaacaattgttaggtaaagcccgtgttactaaagagtttt 12190055  T
Q  325 agtaacactttatagtattatcaataacatttaaaaactgttacatatttatatttttgtaacactttttgtattactagtaaca 409  Q
    |||||   ||||||||||||| | |||||| || ||| ||||||   ||||||||||| ||||||||||  ||||||||||||||    
T  12190056 agtaattttttatagtattattagtaacatatataaagtgttactcgtttatattttt-taacacttttgatattactagtaaca 12190139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 223 - 409
Target Start/End: Original strand, 51758755 - 51758942
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||| ||||||||||||| |||| | || ||||| ||||||||||  ||| |||||||| || |    
T  51758755 gtaacatttgaaaattgtaactaaatcaagaaaaatgttagtaattaaatttagcaacactcgaacaattattaggtaaagctcgtattactaaagagtt 51758854  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    | ||| ||| ||||||||||||||  ||||| ||||||| |||| || || ||| ||| |||||||||||||||||| || |||||||    
T  51758855 ttagttacattttatagtattatctgtaacaattaaaaagtgttgcaaatgttacattattgtaacactttttgtatcaccagtaaca 51758942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 258 - 339
Target Start/End: Original strand, 3399659 - 3399740
Alignment:
Q  258 tgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatag 339  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||||||| |||||| ||||||||||||||    
T  3399659 tgttactaattaaatttagtaacatttgaacaattgttaggtaaaatctatgttactaaatagcttcggtaacactttatag 3399740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 231 - 361
Target Start/End: Complemental strand, 39368730 - 39368599
Alignment:
Q  231 tgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaac 330  Q
    |||||| ||||||||||| ||| ||| |||||||||||||| ||||| ||||||   ||||||||||| ||||  | || ||||||| ||||||||| ||    
T  39368730 tgaaaaatgttactaaatcaagaaaaatgttactaattaaaattagtcacatttatacaattgttaggcaaagcacatgctactaaagagcttcagttac 39368631  T
Q  331 a-ctttatagtattatcaataacatttaaaaa 361  Q
    |  ||||||||||||||| |||||||||||||    
T  39368630 atttttatagtattatcagtaacatttaaaaa 39368599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 223 - 317
Target Start/End: Original strand, 16222780 - 16222874
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 317  Q
    |||||| ||||||| ||| ||||||| ||| ||| |||||||||| ||||||||||||| ||||  ||||||||||||||| |||||||||||||    
T  16222780 gtaacatttgaaaattgtaactaaatcaagaaaaatgttactaataaaatttagtaacacttgaataattgttaggtaaagcccgtgttactaaa 16222874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 223 - 346
Target Start/End: Original strand, 28636905 - 28637028
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| || |||| ||| ||||||| ||| ||| ||||||||||| |||||||||||||||||  |||||||||||||||||  |||| ||||| || |    
T  28636905 gtaacatttaaaaattgtaactaaatcaagaaaaatgttactaattcaatttagtaacatttgaataattgttaggtaaagtcactgttgctaaagagat 28637004  T
Q  323 tcagtaacactttatagtattatc 346  Q
    | ||| ||| ||||||||| ||||    
T  28637005 ttagttacattttatagtaatatc 28637028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 230 - 322
Target Start/End: Original strand, 897464 - 897555
Alignment:
Q  230 ttgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    ||||||| ||||||||||| ||| ||| |||| ||||||||||||||||||| |||| |||||||||||| |||| | |||||||||| ||||    
T  897464 ttgaaaattgttactaaatgaagaaaaatgttcctaattaaatttagtaacaattgaacaattgttaggt-aagttcatgttactaaagagct 897555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 4001745 - 4001629
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||||||| ||||||||   || || |||||    
T  4001745 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagaggagacccgtagatgccgttgtaagaag 4001646  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  4001645 agtagatcaaatggagg 4001629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 15085926 - 15086042
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||| ||||| ||| ||||||||   || ||||||||    
T  15085926 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgtagagagaagacccgtagatgccgttgttagaag 15086025  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  15086026 agtagatcaaatggagg 15086042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 40416374 - 40416471
Alignment:
Q  97 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatca 194  Q
    ||||||||||||||||||||||||||||||||  |||||| ||| ||| |  |||| ||||| ||| | |||||||||||||| || || ||||||||    
T  40416374 gtagcacctatagtagaaaagatggtggaaacgaggcttaggtggtttaggcatgtagagagaagaactgtagattttgtagtaaggagagtagatca 40416471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 5911762 - 5911682
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaag 303  Q
    |||||| ||||||| | | ||||||| ||| ||| ||||||| |||||||||||||||| |||| ||||||||||||||||    
T  5911762 gtaacacttgaaaattttaactaaatcaagaaaaatgttactgattaaatttagtaacacttgaacaattgttaggtaaag 5911682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 8671910 - 8672026
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||||||||||||   || || |||||    
T  8671910 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagatccgtagatgccgtggtaagaag 8672009  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  8672010 agtagatcaaatggagg 8672026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 32083035 - 32082919
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||| |||  ||||||||| ||||||||   || || |||||    
T  32083035 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggacatgcagagaggagacccgtagatgccgttgtaagaag 32082936  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  32082935 agtagatcaaatggagg 32082919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 51812517 - 51812625
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||| || |||||||||||||||||||||||||| |||||| |||||||||  |||| ||||| | |   |||||||||||||| ||||     
T  51812517 agagagttggggtaacaactatagtagaaaagatggtggaaactaggcttatgtgatttgggcatgtagagagaaaaattgtagattttgtagtaagaaa 51812616  T
Q  186 ggtagatca 194  Q
     ||||||||    
T  51812617 agtagatca 51812625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 230 - 317
Target Start/End: Original strand, 13208621 - 13208708
Alignment:
Q  230 ttgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaa 317  Q
    ||||||| ||| | ||||| ||| ||| ||||||||||||||||||||| || |||| | |||||||||||||  |||||||||||||    
T  13208621 ttgaaaattgtaattaaattaagaaaaatgttactaattaaatttagtaccacttgaaccattgttaggtaaaacccgtgttactaaa 13208708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 15214329 - 15214415
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtg 309  Q
    |||||| ||||||| ||  ||||||| ||| ||| | |||||||||||||||||||| |||||| |||||||| |||||||| ||||    
T  15214329 gtaacacttgaaaattgcaactaaatcaagaaaaattttactaattaaatttagtaatatttgaacaattgttgggtaaagttcgtg 15214415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 223 - 398
Target Start/End: Original strand, 18308150 - 18308327
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||||||||||| ||| ||| ||||||  |||| | ||| ||||||||   |||||||||||||||| | |||||||| ||  |||    
T  18308150 gtaacatttgaaaattgttactaaatcaagaaaaatgttacagattacaattattaacatttctacaattgttaggtaaagcctgtgttactgaagggct 18308249  T
Q  323 tcagtaacactttatagtattatcaataacatttaaaaactgttacata--tttatatttttgtaacactttttgtat 398  Q
    | ||| ||| ||||||||||| |   ||||||| ||||| ||| ||| |   ||| ||| ||||||||||||||||||    
T  18308250 ttagttacattttatagtattgtttgtaacattcaaaaagtgtcacaaaatgttacattattgtaacactttttgtat 18308327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 51602058 - 51602164
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 195  Q
    |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| |||||||| | || || ||||| |||||||||    
T  51602058 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgtcgtggtaagaagagtagatcaa 51602157  T
Q  196 atggagg 202  Q
    |||||||    
T  51602158 atggagg 51602164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 86 - 179
Target Start/End: Original strand, 43423711 - 43423804
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagt 179  Q
    ||||||| | |||| ||||||||||||||||||||||||||||| |||||| ||| |||||  |||| ||||| |||   ||||||| ||||||    
T  43423711 agagagttggggtaacacctatagtagaaaagatggtggaaactaggcttaggtggtttggccatgtagagagaagacttgtagattatgtagt 43423804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 1210737 - 1210853
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  1210737 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 1210836  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  1210837 agtagatcaaatggagg 1210853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 2544591 - 2544707
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | ||||||||||||||||||||||||||||||||   | |||| ||| |||||| |||| ||||| ||| |  |||||| | |||| || ||    
T  2544591 agagagttggggtagcacctatagtagaaaagatggtggaaaacagacttaggtggtttggacatgtagagagaagacctatagattctatagtaaggag 2544690  T
Q  186 ggtagatcaaatggagg 202  Q
     |||||||| |||||||    
T  2544691 agtagatcagatggagg 2544707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 146
Target Start/End: Complemental strand, 3819146 - 3819086
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||||| |||||||||||||| |||||||||||||||| |||| | |||||||| |||||    
T  3819146 agagagttgaggtagcacctatggtagaaaagatggtggtaactagacttaagtggtttgg 3819086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 97 - 201
Target Start/End: Complemental strand, 14226108 - 14226004
Alignment:
Q  97 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaa 196  Q
    |||||||||||  |||||||||||||||||| | |||||| ||| |||||  |||| |||||||   | |||||||||||||| || || |||||||| |    
T  14226108 gtagcacctatcatagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagaggattcctgtagattttgtagtaaggagagtagatcaca 14226009  T
Q  197 tggag 201  Q
    |||||    
T  14226008 tggag 14226004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 32404806 - 32404730
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagatt 172  Q
    |||| ||||||||||| ||||||||||||||| | |||||| ||| ||||||||||| ||||| ||| | |||||||    
T  32404806 ggtaacacctatagtaaaaaagatggtggaaaataggcttaggtggtttggatatgtagagagaagacctgtagatt 32404730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 34792639 - 34792523
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  34792639 agagagtgggggtagcacctatagtagaaaagttggtagaaagtaggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaag 34792540  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  34792539 agtagatcaaatggagg 34792523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 4590853 - 4590774
Alignment:
Q  51 agactagatgagataagattaggaatgaaaatattagagagtcgaggtagcacctatagtagaaaagatggtggaaactc 130  Q
    ||||||||  ||||| |||||| ||||| ||||||||||||| | ||||||| | ||  |||||||||||||||||||||    
T  4590853 agactagacaagataggattagaaatgacaatattagagagttggggtagcatccattatagaaaagatggtggaaactc 4590774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 48431686 - 48431603
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagt 179  Q
    |||||| ||||||||||||||||||||||||| | |||||| ||| |||||  |||| ||||| |||   ||||||||||||||    
T  48431686 ggtagcccctatagtagaaaagatggtggaaaataggcttaggtggtttgggcatgtagagagaagacttgtagattttgtagt 48431603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 223 - 399
Target Start/End: Original strand, 17112927 - 17113107
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttac--taaaaag 320  Q
    |||| ||||||||| ||||||||||| ||| ||| |  ||||| |||||||| |||||| |||| |||||||||| |||||  | ||||||  |||| ||    
T  17112927 gtaataattgaaaattgttactaaatcaagaaaaatagtactagttaaattttgtaacacttgaacaattgttagttaaagctcatgttactataaagag 17113026  T
Q  321 cttcagtaacactttatagtattatcaataacatttaaaaactgttacatatttatat--ttttgtaacactttttgtatt 399  Q
    ||  | ||| | ||||  |||| |||| ||||||| ||||| |||||| ||||| |||  |||||||||| || |||||||    
T  17113027 ctgtaataatattttactgtatcatcagtaacattaaaaaaatgttacttatttctattcttttgtaacaattgttgtatt 17113107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 1661422 - 1661463
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaa 127  Q
    ||||||| | ||||||||||||||||||||||||||||||||    
T  1661422 agagagttggggtagcacctatagtagaaaagatggtggaaa 1661463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 5338727 - 5338776
Alignment:
Q  97 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    |||||||||||||||||||||||||||||||||  ||||| ||| |||||    
T  5338727 gtagcacctatagtagaaaagatggtggaaactgagcttaggtggtttgg 5338776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 202
Target Start/End: Complemental strand, 35828880 - 35828724
Alignment:
Q  50 aagactagatgagataagattaggaatgaaaatattagagagtcgag-----gtagcacctatagtagaaaagatggtggaaactcggcttaagtgattt 144  Q
    |||||||| || ||||||||||| ||||| ||||||||||||  |||     ||||||||||| ||||||||||||||||||| | || ||| ||| |||    
T  35828880 aagactaggtgtgataagattagaaatgacaatattagagaga-gagtttgagtagcacctatggtagaaaagatggtggaaaatagggttaggtggttt 35828782  T
Q  145 ggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaatggagg 202  Q
    |||  ||| ||||| ||| |  |||||| |||||| || || | |||||| |||||||    
T  35828781 ggacgtgtagagagaagacctatagattatgtagtaaggagagaagatcatatggagg 35828724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 38868885 - 38868934
Alignment:
Q  97 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    |||||||||||  ||||||||||||||||||||||||||| ||| |||||    
T  38868885 gtagcacctatcatagaaaagatggtggaaactcggcttaggtggtttgg 38868934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 696261 - 696377
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  ||  ||||| |||| ||||| ||| ||||||||   || || |||||    
T  696261 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggcttggacatgtagagagaagacccgtagatgccgttgtaagaag 696360  T
Q  186 ggtagatcaaatggagg 202  Q
     |||||||| |||||||    
T  696361 agtagatcatatggagg 696377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 258 - 302
Target Start/End: Original strand, 1843989 - 1844033
Alignment:
Q  258 tgttactaattaaatttagtaacatttgaccaattgttaggtaaa 302  Q
    ||||||| ||| ||||||||||||||||| |||||||||||||||    
T  1843989 tgttactgattgaatttagtaacatttgaacaattgttaggtaaa 1844033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 7921843 - 7921899
Alignment:
Q  102 acctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagag 158  Q
    |||||||||||||||||||||||||||| || ||| ||| |||||| |||| |||||    
T  7921843 acctatagtagaaaagatggtggaaactaggtttatgtggtttggacatgtagagag 7921899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 8391764 - 8391876
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | || |||  |  |||||| |||| ||||||||| ||||||||   || || |||||    
T  8391764 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggtttagattgtttggacatgtagagaggagacccgtagatgccgttgtaagaag 8391863  T
Q  186 ggtagatcaaatg 198  Q
     ||||||||||||    
T  8391864 agtagatcaaatg 8391876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 13827850 - 13827746
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 195  Q
    ||||| ||||||||||||||||| |||||||||| || | | ||| |||||| |||| ||||| |||   ||||||| |||||| || || ||||||||     
T  13827850 ggtagtacctatagtagaaaagacggtggaaactagggtaaggtggtttggacatgtagagagaagaagtgtagattctgtagtaaggagagtagatcat 13827751  T
Q  196 atgga 200  Q
    |||||    
T  13827750 atgga 13827746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 302
Target Start/End: Original strand, 15204615 - 15204675
Alignment:
Q  242 actaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaa 302  Q
    ||||||| ||| ||| |||| |||| |||||||||||||| |||| |||||||||||||||    
T  15204615 actaaatcaagaaaaatgttgctaactaaatttagtaacacttgaacaattgttaggtaaa 15204675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 13827994 - 13827935
Alignment:
Q  99 agcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagag 158  Q
    ||||||||||||||||||||||||||||||| || ||| ||| |||| | |||| |||||    
T  13827994 agcacctatagtagaaaagatggtggaaactagggttaggtggtttgaacatgtagagag 13827935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 16943167 - 16943210
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaact 129  Q
    ||||||| | ||||| ||||||||||||||||||||||||||||    
T  16943167 agagagttggggtagtacctatagtagaaaagatggtggaaact 16943210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 286
Target Start/End: Complemental strand, 37097438 - 37097375
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttga 286  Q
    |||||| ||||||| ||| ||||||| ||| ||| ||||||| || ||||||||||||||||||    
T  37097438 gtaacacttgaaaattgtaactaaatcaagaaaaatgttactgataaaatttagtaacatttga 37097375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 434 - 488
Target Start/End: Complemental strand, 39368025 - 39367970
Alignment:
Q  434 tttgagaagttgtaaaaaactgtcgcaaagttgtctagaat-aaaaattgtgaatc 488  Q
    ||||||||||||||||||| ||||||||| ||||| ||| | ||||||||||||||    
T  39368025 tttgagaagttgtaaaaaagtgtcgcaaaattgtccagactaaaaaattgtgaatc 39367970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 86 - 200
Target Start/End: Complemental strand, 30202420 - 30202306
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||| | |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || |||||    
T  30202420 agagagtgggggtagcacctatagtagaaaggttggtagaaaataggcttagatggtttggtcatgtagagagaagacccgtagatgccgtggtaagaag 30202321  T
Q  186 ggtagatcaaatgga 200  Q
     ||||||||||||||    
T  30202320 agtagatcaaatgga 30202306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 52073754 - 52073680
Alignment:
Q  85 tagagagtcgaggtagcacctatagtagaaaagatggt-ggaaactcggcttaagtgatttggatatgtggagag 158  Q
    |||||||| | |||||||||||| ||||||||||||||   |||||||||||| ||| |||||| |||| |||||    
T  52073754 tagagagttggggtagcacctattgtagaaaagatggtaaaaaactcggcttaggtggtttggacatgtagagag 52073680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 4380015 - 4380048
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaact 129  Q
    ||||||| ||||||||||||||||||||||||||    
T  4380015 ggtagcaactatagtagaaaagatggtggaaact 4380048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 8343151 - 8343098
Alignment:
Q  83 attagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggctta 136  Q
    ||||||| || | |||| ||||| ||||||||||||||||||||||| ||||||    
T  8343151 attagagtgttggggtaacacctttagtagaaaagatggtggaaactaggctta 8343098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 17267976 - 17267927
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttg 145  Q
    ||||||| |||||||||||||||| ||||||||| |||||| ||| ||||    
T  17267976 ggtagcatctatagtagaaaagattgtggaaacttggcttaggtggtttg 17267927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 202
Target Start/End: Complemental strand, 36340082 - 36339977
Alignment:
Q  97 gtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaaa 196  Q
    |||||||||||| |||||||||||||||||| | || ||| ||| ||| || |||  ||||| ||| |  ||||||||||||| ||  |||| ||||| |    
T  36340082 gtagcacctatattagaaaagatggtggaaaataggtttaggtggtttagacatggagagagaagacctatagattttgtagtaaggcgggttgatcaga 36339983  T
Q  197 tggagg 202  Q
    ||||||    
T  36339982 tggagg 36339977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 151
Target Start/End: Original strand, 37591028 - 37591069
Alignment:
Q  110 tagaaaagatggtggaaactcggcttaagtgatttggatatg 151  Q
    |||||||||||||||||||||| | |||||| ||||||||||    
T  37591028 tagaaaagatggtggaaactcgacctaagtggtttggatatg 37591069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 86 - 122
Target Start/End: Original strand, 9509310 - 9509346
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggt 122  Q
    ||||||| | |||||||||||||||||||||||||||    
T  9509310 agagagttggggtagcacctatagtagaaaagatggt 9509346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 9592726 - 9592842
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| | || |||| | ||||||  ||  ||||  |||| ||||| ||| ||||||||   || || |||||    
T  9592726 agagagtgggggtagcacctatagtagaaaagtttgtagaaaataggcttagatgggttgggcatgtagagagaagacccgtagatgccgtggtaagaag 9592825  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  9592826 agtagatcaaatggagg 9592842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 22090088 - 22090204
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| | ||| ||| ||||||||   || || ||||     
T  22090088 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagggagaagacccgtagatgccgtggtaagaaa 22090187  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  22090188 agtagatcaaatggagg 22090204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 86 - 202
Target Start/End: Complemental strand, 49347683 - 49347567
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | ||||||| |||||||||||||| |||| |||| | ||||||  || |||||  |||  ||||| ||| ||||||||   || || |||||    
T  49347683 agagagtaggggtagcatctatagtagaaaagttggtagaaaataggcttagatggtttggtcatgcagagagaagacccgtagatgccgtggtaagaag 49347584  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  49347583 agtagatcaaatggagg 49347567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0684 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 225 - 409
Target Start/End: Complemental strand, 843 - 658
Alignment:
Q  225 aacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttc 324  Q
    |||| ||||||| ||| ||||||| ||| ||||||||||||||||||||| | |||| | || |||||||||| |||||||| |||||||||| || ||     
T  843 aacacttgaaaattgtaactaaatcaagaaaattgttactaattaaattttgcaacactcgaacaattgttagataaagtccatgttactaaagagtttt 744  T
Q  325 agtaacactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    ||| ||| |||||||||||||| |||||| ||||||| |||  || || ||| ||| ||| |||||||||||||| ||||||||||    
T  743 agttacattttatagtattatctataacaattaaaaagtgtcgcaaatgttacattattggaacactttttgtatcactagtaaca 658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 254 - 394
Target Start/End: Complemental strand, 446350 - 446211
Alignment:
Q  254 aaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaacactttatagtattatcaataaca 353  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||| ||||||| | |||||||| ||||| ||||||||||||||||| ||  | |||||    
T  446350 aaattgttaccaattaaatttggtaacatttgaacaattgttaggaaaagtccatattactaaagagctttagtaacactttatagtagtagtagtaaca 446251  T
Q  354 tttaaaaactgttacatatttatatttttgtaacacttttt 394  Q
    || ||||| |||||| ||||| || ||||||||||||||||    
T  446250 ttaaaaaaatgttacctatttgta-ttttgtaacacttttt 446211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 230 - 409
Target Start/End: Complemental strand, 40789 - 40609
Alignment:
Q  230 ttgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagcttcagtaa 329  Q
    ||||||| ||| ||||||| ||| ||||||||||||||||||||| | |||| | || |||||||||| |||||||| |||||||||| || || ||| |    
T  40789 ttgaaaattgtaactaaatcaagaaaattgttactaattaaattttgcaacactcgaacaattgttagataaagtccatgttactaaagagttttagtta 40690  T
Q  330 cactttatagtattatcaataacatttaaaaactgttacatat-ttatatttttgtaacactttttgtattactagtaaca 409  Q
    || ||||||||||||||  ||||| ||||||| |||  || || ||| ||| | |||||||||||||||| ||||||||||    
T  40689 cattttatagtattatctgtaacaattaaaaagtgtctcaaatgttacattatcgtaacactttttgtatcactagtaaca 40609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 223 - 346
Target Start/End: Original strand, 6701 - 6824
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| || |||| ||| ||||||| ||| ||| ||||||||||||||||||| |||| |||| |||||||||||||||| | |||||||||||| | |    
T  6701 gtaacacttaaaaattgtaactaaatcaagaaaaatgttactaattaaatttagcaacacttgaacaattgttaggtaaagccggtgttactaaaatgtt 6800  T
Q  323 tcagtaacactttatagtattatc 346  Q
    | ||| ||| ||||||||| ||||    
T  6801 ttagttacattttatagtactatc 6824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 82713 - 82829
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  ||||||||| || | ||||| |||||| |||||   || || |||||    
T  82713 agagagtgggggtagcacctatagtagaaaagttggtagaaaatgggcttagatgatttggacatatagagagaagatccatagatgcagtcgtaagaag 82812  T
Q  186 ggtagatcaaatggagg 202  Q
    |||| ||||||||||||    
T  82813 ggtatatcaaatggagg 82829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 146
Target Start/End: Complemental strand, 44164 - 44098
Alignment:
Q  80 aatattagagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttgg 146  Q
    ||||||||||||| | |||||||||||||||||||||||||| ||||| | |||||| ||| |||||    
T  44164 aatattagagagttggggtagcacctatagtagaaaagatggcggaaaataggcttaggtggtttgg 44098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 86 - 202
Target Start/End: Original strand, 31460 - 31576
Alignment:
Q  86 agagagtcgaggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaag 185  Q
    ||||||| | |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||    | || |||||    
T  31460 agagagtgggggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttgggcatgtagagagaagacccgtagatgccatggtaagaag 31559  T
Q  186 ggtagatcaaatggagg 202  Q
     ||||||||||||||||    
T  31560 agtagatcaaatggagg 31576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 1228 - 1123
Alignment:
Q  96 ggtagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtagattttgtagttagaagggtagatcaa 195  Q
    |||||||||||||||||||||| |||| |||| | ||||||  || |||||  |||| ||||| ||| ||||||||   || || ||||| |||||||||    
T  1228 ggtagcacctatagtagaaaagttggtagaaaataggcttagatggtttggccatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaa 1129  T
Q  196 atggag 201  Q
    ||||||    
T  1128 atggag 1123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 223 - 331
Target Start/End: Original strand, 8747 - 8853
Alignment:
Q  223 gtaacaattgaaaactgttactaaataaaggaaattgttactaattaaatttagtaacatttgaccaattgttaggtaaagtccgtgttactaaaaagct 322  Q
    |||||| ||||||| ||| ||||||||||  |||| |||||||| | ||| ||||||||||| ||||||| || || |||  || |||||||||| ||||    
T  8747 gtaacagttgaaaaatgtaactaaataaacaaaat-gttactaaatgaatatagtaacatttaaccaattatttggcaaacccc-tgttactaaatagct 8844  T
Q  323 tcagtaaca 331  Q
    |||||||||    
T  8845 tcagtaaca 8853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 169
Target Start/End: Original strand, 11802 - 11873
Alignment:
Q  98 tagcacctatagtagaaaagatggtggaaactcggcttaagtgatttggatatgtggagaggagatccgtag 169  Q
    |||||||||| |||||||||||||| | ||||||||||| ||| |||||  |||| ||||| ||||| ||||    
T  11802 tagcacctattgtagaaaagatggtaggaactcggcttaggtggtttgggcatgtagagagaagatctgtag 11873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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