View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20633_low_90 (Length: 350)

Name: NF20633_low_90
Description: NF20633
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20633_low_90
NF20633_low_90
[»] chr4 (43 HSPs)
chr4 (15-202)||(43143584-43143771)
chr4 (15-205)||(42333776-42333966)
chr4 (15-199)||(30216742-30216926)
chr4 (17-204)||(50205079-50205266)
chr4 (15-199)||(3292896-3293080)
chr4 (15-199)||(6690235-6690419)
chr4 (15-199)||(28877250-28877434)
chr4 (15-203)||(25930687-25930875)
chr4 (18-202)||(29319708-29319892)
chr4 (33-199)||(10352902-10353068)
chr4 (27-203)||(20129289-20129465)
chr4 (15-199)||(48989311-48989495)
chr4 (15-199)||(29995983-29996167)
chr4 (15-163)||(44156670-44156818)
chr4 (15-158)||(35545977-35546120)
chr4 (27-203)||(26439291-26439467)
chr4 (27-202)||(34407296-34407471)
chr4 (15-182)||(36382346-36382512)
chr4 (27-202)||(13012168-13012343)
chr4 (28-199)||(26448036-26448206)
chr4 (18-169)||(40529028-40529179)
chr4 (27-202)||(47500753-47500928)
chr4 (15-172)||(17511233-17511391)
chr4 (27-202)||(43355884-43356059)
chr4 (33-199)||(30077649-30077814)
chr4 (87-170)||(48129978-48130061)
chr4 (87-193)||(30109945-30110051)
chr4 (15-147)||(1817752-1817884)
chr4 (15-127)||(6235575-6235687)
chr4 (27-104)||(13392893-13392970)
chr4 (27-104)||(13396032-13396109)
chr4 (92-199)||(45194159-45194266)
chr4 (97-199)||(27363344-27363446)
chr4 (141-202)||(7769308-7769369)
chr4 (89-157)||(6254569-6254637)
chr4 (145-199)||(49908782-49908836)
chr4 (145-199)||(5517494-5517548)
chr4 (146-199)||(6212029-6212082)
chr4 (146-199)||(17554979-17555032)
chr4 (134-199)||(13392989-13393054)
chr4 (134-199)||(13396128-13396193)
chr4 (97-154)||(20113819-20113876)
chr4 (145-198)||(50720476-50720529)
[»] chr8 (15 HSPs)
chr8 (15-203)||(4403987-4404175)
chr8 (15-202)||(34136825-34137012)
chr8 (15-176)||(16788025-16788186)
chr8 (15-199)||(23402091-23402275)
chr8 (15-199)||(3648794-3648978)
chr8 (28-160)||(9877242-9877374)
chr8 (15-199)||(29728386-29728570)
chr8 (18-182)||(15838286-15838449)
chr8 (15-199)||(2729196-2729380)
chr8 (15-195)||(36408538-36408718)
chr8 (27-203)||(39914494-39914669)
chr8 (68-163)||(3435288-3435385)
chr8 (15-150)||(42230971-42231104)
chr8 (89-159)||(40470567-40470637)
chr8 (97-195)||(10397122-10397220)
[»] chr3 (19 HSPs)
chr3 (15-202)||(6503569-6503756)
chr3 (15-202)||(11018212-11018399)
chr3 (15-199)||(45182964-45183148)
chr3 (15-199)||(6930894-6931078)
chr3 (15-199)||(33040936-33041120)
chr3 (27-203)||(6269438-6269614)
chr3 (27-202)||(22968456-22968631)
chr3 (15-202)||(27935158-27935345)
chr3 (27-205)||(19390123-19390301)
chr3 (33-199)||(19565519-19565685)
chr3 (15-182)||(34084122-34084289)
chr3 (27-203)||(39771769-39771945)
chr3 (33-199)||(45335858-45336023)
chr3 (15-199)||(35514249-35514429)
chr3 (15-169)||(40081741-40081893)
chr3 (87-166)||(5135285-5135364)
chr3 (125-198)||(22922141-22922214)
chr3 (145-199)||(6890981-6891035)
chr3 (133-199)||(5354692-5354758)
[»] chr5 (22 HSPs)
chr5 (15-199)||(31680350-31680534)
chr5 (15-199)||(12278860-12279044)
chr5 (15-204)||(17332551-17332740)
chr5 (15-199)||(31501716-31501900)
chr5 (15-202)||(37254621-37254808)
chr5 (15-168)||(33430335-33430488)
chr5 (18-199)||(10033910-10034091)
chr5 (15-199)||(13817960-13818144)
chr5 (33-202)||(36293639-36293808)
chr5 (27-203)||(39434675-39434851)
chr5 (18-170)||(39657509-39657661)
chr5 (27-163)||(16155016-16155152)
chr5 (15-174)||(19985947-19986106)
chr5 (15-199)||(36291354-36291538)
chr5 (27-202)||(26283330-26283505)
chr5 (18-152)||(16333879-16334013)
chr5 (15-165)||(43068894-43069044)
chr5 (16-176)||(1776377-1776537)
chr5 (33-202)||(3155649-3155818)
chr5 (87-169)||(28801300-28801382)
chr5 (97-199)||(202622-202724)
chr5 (152-199)||(26543902-26543949)
[»] chr7 (22 HSPs)
chr7 (15-205)||(34389056-34389246)
chr7 (15-199)||(37002144-37002328)
chr7 (15-199)||(43184468-43184652)
chr7 (18-203)||(5555466-5555651)
chr7 (15-166)||(40920003-40920154)
chr7 (15-173)||(35090177-35090335)
chr7 (15-199)||(26624728-26624913)
chr7 (18-202)||(3114099-3114283)
chr7 (17-199)||(8867733-8867915)
chr7 (15-199)||(7002708-7002892)
chr7 (15-199)||(7048579-7048763)
chr7 (27-202)||(14777119-14777294)
chr7 (16-166)||(38638237-38638387)
chr7 (15-199)||(33685547-33685731)
chr7 (15-182)||(36630816-36630983)
chr7 (15-163)||(36658200-36658348)
chr7 (15-182)||(8394125-8394292)
chr7 (146-198)||(37966614-37966666)
chr7 (67-123)||(10868525-10868583)
chr7 (137-184)||(10876829-10876876)
chr7 (92-195)||(26502797-26502899)
chr7 (92-195)||(26589815-26589917)
[»] chr2 (23 HSPs)
chr2 (15-199)||(45418566-45418750)
chr2 (16-204)||(8147329-8147518)
chr2 (18-199)||(8059336-8059517)
chr2 (16-199)||(770977-771165)
chr2 (15-163)||(12756837-12756985)
chr2 (18-202)||(35962695-35962879)
chr2 (15-199)||(44084603-44084787)
chr2 (18-202)||(42439966-42440150)
chr2 (18-203)||(18981596-18981780)
chr2 (27-176)||(41251646-41251795)
chr2 (15-174)||(31581622-31581781)
chr2 (45-202)||(2958131-2958287)
chr2 (27-202)||(17445053-17445226)
chr2 (18-202)||(32127144-32127328)
chr2 (27-202)||(6403816-6403991)
chr2 (18-173)||(16405609-16405764)
chr2 (15-163)||(26162702-26162847)
chr2 (18-182)||(2285862-2286026)
chr2 (82-184)||(26237955-26238056)
chr2 (66-195)||(4555260-4555390)
chr2 (92-173)||(7072627-7072710)
chr2 (103-162)||(34905969-34906028)
chr2 (152-199)||(34523223-34523270)
[»] chr6 (14 HSPs)
chr6 (15-199)||(28996713-28996897)
chr6 (204-332)||(32666342-32666470)
chr6 (15-182)||(18339106-18339273)
chr6 (18-202)||(34948761-34948945)
chr6 (33-199)||(29743266-29743432)
chr6 (18-203)||(13837800-13837985)
chr6 (27-202)||(398597-398772)
chr6 (15-163)||(33229336-33229484)
chr6 (97-198)||(24697899-24698000)
chr6 (87-196)||(31028436-31028545)
chr6 (146-199)||(13647000-13647053)
chr6 (97-154)||(24695515-24695572)
chr6 (146-199)||(34385519-34385572)
chr6 (105-154)||(24072576-24072625)
[»] scaffold0502 (1 HSPs)
scaffold0502 (15-182)||(5230-5397)
[»] scaffold0041 (1 HSPs)
scaffold0041 (15-166)||(52941-53092)
[»] chr1 (15 HSPs)
chr1 (15-202)||(35907532-35907719)
chr1 (15-199)||(321377-321561)
chr1 (18-202)||(7433425-7433609)
chr1 (16-199)||(17445296-17445479)
chr1 (27-202)||(26144235-26144410)
chr1 (15-199)||(3828967-3829150)
chr1 (15-163)||(42310941-42311089)
chr1 (35-182)||(32982076-32982223)
chr1 (56-199)||(41972314-41972458)
chr1 (56-199)||(33489670-33489815)
chr1 (79-202)||(23313218-23313342)
chr1 (97-167)||(35951427-35951497)
chr1 (146-199)||(44352614-44352667)
chr1 (145-199)||(31866960-31867014)
chr1 (117-199)||(48901207-48901288)
[»] scaffold0069 (1 HSPs)
scaffold0069 (27-202)||(17822-17997)
[»] scaffold0154 (1 HSPs)
scaffold0154 (15-199)||(31463-31647)
[»] scaffold2142 (1 HSPs)
scaffold2142 (27-202)||(502-677)
[»] scaffold0002 (1 HSPs)
scaffold0002 (27-202)||(480469-480644)
[»] scaffold0769 (1 HSPs)
scaffold0769 (152-199)||(1260-1307)


Alignment Details
Target: chr4 (Bit Score: 156; Significance: 8e-83; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 43143584 - 43143771
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  43143584 gagatgaacccatcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 43143683  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||||||    
T  43143684 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgtcggacggtgaaaccgcccatg 43143771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 15 - 205
Target Start/End: Original strand, 42333776 - 42333966
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    |||||||||  |||||||||||||||||| |||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  42333776 gagatgaacttatcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 42333875  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatgact 205  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  42333876 ttggcttttgggttgagtctaatgtgcaaaaattatcgattgagcccggacgaccgcccgggatcgctggacggtgaaaccgtccatgact 42333966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 30216742 - 30216926
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| ||||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  30216742 gagatgaacccgtcaatagtgtgctaaataaaattccgagatctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 30216841  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    || |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||    
T  30216842 ttagcttttgggttgggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaatccgccc 30216926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 17 - 204
Target Start/End: Original strand, 50205079 - 50205266
Alignment:
Q  17 gatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaatt 116  Q
    ||||||||| ||||| ||||||||||| ||||||| |||||||||||  |||||||||||| ||||||  ||| ||||||||||||||||||||||||||    
T  50205079 gatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgtccaattttttctttttgtaagtgtgttaatt 50205178  T
Q  117 ggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatgac 204  Q
    |||||||||||||  |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||    
T  50205179 ggcttttgggttggatctaatgtgcaaaaattatcgatcgagctcgggcgaccgcccgggatcgccggacggtgaaaccgcccctgac 50205266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 3292896 - 3293080
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||| | ||||| ||||||||||| |||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  3292896 gagatgaactcgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 3292995  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||| || | || ||||||||||||||    
T  3292996 ttggcttttgggttgggtctaatgggcaaaaattatcgatcgagcccgggcgaccgcccggggtcactgggcggtgaaaccgccc 3293080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 6690235 - 6690419
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    |||| |||||| ||||| ||||||||||| ||||| |||||||||||||  |||||||||||| || |||| ||||||||||||||||||||||||||||    
T  6690235 gagacgaacccgtcaatagtgtgctaaataaaatttcgagacctatttgcgtgtgagaattttcagtttgcccaaatttttctttttgtaagtgtgttaa 6690334  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||    
T  6690335 ttggcttttgggttgggtctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccgccc 6690419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 28877250 - 28877434
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||| | ||||||||||||||| |||| |||||||    
T  28877250 gagatgaacccatcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaatttttagatttcccaaatttttctttttataagcgtgttaa 28877349  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    || |||||| |||||| |||||||||||||||||||||||| |||||   ||||||| |||| ||  ||||||||||||||||||    
T  28877350 ttagcttttaggttgaatctaatgtgcaaaaattatcgatctagcccaagcgaccgcacggggtcatcggacggtgaaaccgccc 28877434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 25930875 - 25930687
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| ||||||| |||||||||||  ||||| |||||| | ||||| ||||||||||||||||||| ||||||||    
T  25930875 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaa 25930776  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatga 203  Q
    | |||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||| || |||||  |||||  ||||||||||||    
T  25930775 tgggcttttgggttgagtttaatgtgcaaaaattatagatcgagcccgggcgaccgcccagggtcgccatacggtagaaccgcccatga 25930687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 29319708 - 29319892
Alignment:
Q  18 atgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattg 117  Q
    |||||||| ||||| ||||||||||| ||||||| |||| ||||||  ||||| |||||| ||||||||||||||||||||||||||| ||||||||| |    
T  29319708 atgaacccgtcaatagtgtgctaaataaaattccaagacttatttgtgtgtgacaattttcagattgctcaaatttttctttttgtaaatgtgttaatgg 29319807  T
Q  118 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    | ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| || ||  |||||  |||||||||||    
T  29319808 gattttgggttgagtctaatgtgcaaaaattatcgatcgagcctggacgaccgccaggggtcaccatacggtagaaccgcccatg 29319892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 33 - 199
Target Start/End: Original strand, 10352902 - 10353068
Alignment:
Q  33 gtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 132  Q
    ||||||||||| |||||||||||||||||||  ||| |||||||| ||||||| |||||||||| |||||||| ||||||||| | ||||| ||||| ||    
T  10352902 gtgtgctaaataaaattccgagacctatttgcgtgtaagaattttcagattgcccaaatttttccttttgtaaatgtgttaatggactttttggttgggt 10353001  T
Q  133 ctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |||||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||||||||||||    
T  10353002 ctaatgtgcaaaaattatcgattgagcccgggcgaccgccaggggtcgccggacggtgaaaccgccc 10353068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 20129465 - 20129289
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| |||||| |||| ||||||  ||||||||||   ||||| |||||| ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  20129465 tcaatagtgtgccaaataaaattctaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttggg 20129366  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatga 203  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||   |||||| ||||||||||||    
T  20129365 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatga 20129289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 48989495 - 48989311
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| |||||||||||||||||||  | |||||||||| ||||||| ||||||||||||||||||||||||||||    
T  48989495 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 48989396  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    | | |||||| |||| || |||||||||||||||||||||||| |||||  ||||||||||  ||| ||| ||||||||| ||||    
T  48989395 tggacttttgagttgggtttaatgtgcaaaaattatcgatcgaacccggttgaccgcccggagtcgtcgggcggtgaaactgccc 48989311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 29995983 - 29996167
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    |||||||| || ||||| ||||||| ||| ||||||||||| |||||||  ||  |||||||| ||||||| |||||||||||||| |||| ||||||||    
T  29995983 gagatgaatccgtcaatagtgtgcttaataaaattccgagaactatttgcgtgcaagaattttcagattgcccaaatttttcttttcgtaaatgtgttaa 29996082  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    | | ||||| ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||| ||| ||||||||||||||    
T  29996083 tggactttttggttgagtctaatgtacaaaaattatcgatcgagtccggacgaccgtccgggatcgtcgggcggtgaaaccgccc 29996167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 44156818 - 44156670
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| |||||||||||||||||||  || ||||||||| ||||||  |||| |||||||||||||||||||||||    
T  44156818 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgagagaattttcagattgtccaaaattttctttttgtaagtgtgttaa 44156719  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgg 163  Q
    ||||||||||||||| |||||||||||||||||||||| | ||||||||    
T  44156718 ttggcttttgggttgggtctaatgtgcaaaaattatcggttgagcccgg 44156670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 158
Target Start/End: Complemental strand, 35546120 - 35545977
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||||||||| ||||||||||| |||||| |||||| |||||  |||||||||||| ||||||| |||| |||||||||||||||||||||||    
T  35546120 gagatgaacccatcaatagtgtgctaaataaaattcagagacccatttgcgtgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaa 35546021  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgag 158  Q
    ||||||||||||||| |||| ||| ||||||||| |||||||||    
T  35546020 ttggcttttgggttgggtctgatgcgcaaaaattgtcgatcgag 35545977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 27 - 203
Target Start/End: Original strand, 26439291 - 26439467
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| |||||  |||| ||||| | ||||||||||   ||||| |||||| ||||||| ||||||||||||||| ||| ||||||||| ||||||||||    
T  26439291 tcaatagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgggcttttggg 26439390  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatga 203  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||   |||||| ||||||||||||    
T  26439391 ttgagtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatga 26439467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 34407296 - 34407471
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| |||||  |||| ||||| | ||||||||||   ||||| |||||| ||||||| ||||||||||||||| ||| ||||||||| ||||||||||    
T  34407296 tcaatagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgggcttttggg 34407395  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||   |||||| |||||||||||    
T  34407396 ttgagtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 34407471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 36382346 - 36382512
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| ||||||| |||||||||||  ||||| |||||| ||||||  |||||||||||||| |||| ||||||||    
T  36382346 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgtccaaatttttctttt-gtaaatgtgttaa 36382444  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgcc 182  Q
    | | ||||| |||||||| ||||||||||||||||| |||||||||||| |||||||||||| |||||    
T  36382445 tggactttttggttgagtttaatgtgcaaaaattatggatcgagcccgggcgaccgcccggggtcgcc 36382512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 13012343 - 13012168
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| |||||| |||| ||||||| ||||||||||   ||||| |||||| | ||||| ||||||||||||||| ||| |||||||||  |||||| ||    
T  13012343 tcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttgg 13012244  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||| ||||   |||||| |||||||||||    
T  13012243 ttgaatctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 13012168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 28 - 199
Target Start/End: Complemental strand, 26448206 - 26448036
Alignment:
Q  28 caattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttgggt 127  Q
    |||| ||||||||||| ||||||||| |||||||||  | |||||||||| ||||||| ||||||||| ||||||||||||||||||| | |||||||||    
T  26448206 caatagtgtgctaaataaaattccgaaacctatttgtgtatgagaattttcagattgcccaaattttt-tttttgtaagtgtgttaatggacttttgggt 26448108  T
Q  128 tgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |   | ||||||||||||||||||||||||| |||||||| ||| |||  ||||||| ||||||||||||||    
T  26448107 tagatttaatgtgcaaaaattatcgatcgagtccggacgatcgcacggagtcgccgggcggtgaaaccgccc 26448036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 169
Target Start/End: Complemental strand, 40529179 - 40529028
Alignment:
Q  18 atgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattg 117  Q
    |||||||| ||||| ||||||||||| ||||||| ||||||||||| |||||| |||||| | ||||  ||||||||||||||||||| |||||||||      
T  40529179 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcatgtgacaattttcaaattgtccaaatttttctttttgtaaatgtgttaatga 40529080  T
Q  118 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgacc 169  Q
    | |||| |||||||| ||||||||||||||||||||||||| ||||||||||    
T  40529079 gtttttaggttgagtttaatgtgcaaaaattatcgatcgagtccggacgacc 40529028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 47500928 - 47500753
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| |||||| |||| ||||||| ||||||||||   ||||| |||||| | ||||| ||||||||||||||  ||| |||||||||  |||||| ||    
T  47500928 tcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttcttttcataaatgtgttaatgagctttttgg 47500829  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||   |||||| |||||||||||    
T  47500828 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 47500753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 17511233 - 17511391
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaatt-ccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgtta 113  Q
    |||||||||| ||||||  |||||||||| ||||| || |||||||||||  ||| | |||||| | ||||| ||||||||||||||||||| |||||||    
T  17511233 gagatgaaccgatcaataatgtgctaaataaaatttccaagacctatttgcgtgtaacaattttcaaattgcccaaatttttctttttgtaaatgtgtta 17511332  T
Q  114 attggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcc 172  Q
    || |||||||||||||||||||||||||||||||||||||||||| | || ||||||||    
T  17511333 atgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagtctgggcgaccgcc 17511391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 43356059 - 43355884
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| |||||  |||| ||||| | ||||||||||   ||||| |||||| ||||||| ||||||||||||||| ||| ||||||||| ||||||||||    
T  43356059 tcaatagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgggcttttggg 43355960  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||||||||||||||||||||||||||| ||||||||| |||| ||| ||| ||||   |||||| |||||||||||    
T  43355959 ttgagtctaatgtgcaaaaattatcgaccgagcccgggcgactgcctggggtcgctacacggtggaaccgcccatg 43355884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 33 - 199
Target Start/End: Original strand, 30077649 - 30077814
Alignment:
Q  33 gtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 132  Q
    ||||||||||| ||||| | |||||||||||  ||| | |||||| ||||||  ||||||||||||||||||| |||||||||   ||||| ||||| ||    
T  30077649 gtgtgctaaataaaatttcaagacctatttgtgtgtaaaaattttcagattgtccaaatttttctttttgtaaatgtgttaatgaactttttggttgggt 30077748  T
Q  133 ctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||||||||||||| |||||||| ||||| || |||||||||| | ||| ||| ||||||||||||||    
T  30077749 ctaatgtgcaaaatttatcgattgagcctgggcgaccgcccgaggtcg-cgggcggtgaaaccgccc 30077814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 87 - 170
Target Start/End: Complemental strand, 48130061 - 48129978
Alignment:
Q  87 caaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccg 170  Q
    |||||||||||||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  48130061 caaatttttctttttgtaagtgtgttaatgagcttttgggttgggtctaatatgcaaaaattatcgatcgagcccggtcgaccg 48129978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 87 - 193
Target Start/End: Complemental strand, 30110051 - 30109945
Alignment:
Q  87 caaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggac 186  Q
    ||||||||||||||||||||||||||||| | |||| || ||| |||||||||||||||||||||||||||| |||| |||||| ||||| ||| ||| |    
T  30110051 caaatttttctttttgtaagtgtgttaatggtctttgggtttgggtctaatgtgcaaaaattatcgatcgagtccgggcgaccgtccggggtcgtcgggc 30109952  T
Q  187 ggtgaaa 193  Q
    |||||||    
T  30109951 ggtgaaa 30109945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 147
Target Start/End: Complemental strand, 1817884 - 1817752
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    |||||||| ||  |||| ||||| ||||| |||||||||||||||||||  ||| |||||||||||||||| ||||||||||||||| ||| ||| ||||    
T  1817884 gagatgaatccgacaatagtgtgttaaataaaattccgagacctatttgcgtgtaagaatttttagattgcccaaatttttctttttataaatgtattaa 1817785  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaat 147  Q
    | | ||||||| |||  ||||||||||||||||    
T  1817784 tggacttttggattggatctaatgtgcaaaaat 1817752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 127
Target Start/End: Complemental strand, 6235687 - 6235575
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| ||||||| |||||||||||  ||||| |||||| | ||||| ||||||||||||||||||| ||||||||    
T  6235687 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaa 6235588  T
Q  115 ttggcttttgggt 127  Q
    | | |||||||||    
T  6235587 tggacttttgggt 6235575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 13392893 - 13392970
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgta 104  Q
    ||||| ||||||||||| ||||| |||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  13392893 tcaatagtgtgctaaataaaatttcgagacctatttgcgtgtgagaatttttagattgcccaaatttttctttttgta 13392970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 13396032 - 13396109
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgta 104  Q
    ||||| ||||||||||| ||||| |||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  13396032 tcaatagtgtgctaaataaaatttcgagacctatttgcgtgtgagaatttttagattgcccaaatttttctttttgta 13396109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 45194266 - 45194159
Alignment:
Q  92 ttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtga 191  Q
    |||| ||||||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||| |||| | | |||| ||| ||| ||| ||||||    
T  45194266 ttttttttttgtaagtgtgttaatggacttttgggttgagtttaatgtgcaaaaattattgatcgagtccgggcaatcgcctggggtcgtcgggcggtga 45194167  T
Q  192 aaccgccc 199  Q
    ||| ||||    
T  45194166 aactgccc 45194159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 97 - 199
Target Start/End: Complemental strand, 27363446 - 27363344
Alignment:
Q  97 tttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccg 196  Q
    ||||||||||||||||||| ||||||||||||| | ||||| ||||||||   |||||||||||||| |||||||||| | |||||  ||||| ||||||    
T  27363446 tttttgtaagtgtgttaatgggcttttgggttgggcctaatatgcaaaaaaattcgatcgagcccgggcgaccgcccgaggtcgccatacggtaaaaccg 27363347  T
Q  197 ccc 199  Q
    |||    
T  27363346 ccc 27363344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 7769369 - 7769308
Alignment:
Q  141 caaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||    
T  7769369 caaaaattatcgatcgagcccgggcgaccgcctggggtcgccggacggtgaaaccgcccatg 7769308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 6254637 - 6254569
Alignment:
Q  89 aatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcga 157  Q
    ||||||| |||||| |||||||||||||| ||||||||||| || ||||||||||||||||||||||||    
T  6254637 aatttttttttttgcaagtgtgttaattgtcttttgggttgggtttaatgtgcaaaaattatcgatcga 6254569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 49908782 - 49908836
Alignment:
Q  145 aattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||    
T  49908782 aattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccgccc 49908836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 5517494 - 5517548
Alignment:
Q  145 aattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||||||||||||||||| | |||||||||||| ||||||| ||||||||||||||    
T  5517494 aattatcgatcgagcccaggcgaccgcccggggtcgccgggcggtgaaaccgccc 5517548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 6212029 - 6212082
Alignment:
Q  146 attatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |||||||||||||| ||| |||||||||| | ||||||||||||||||||||||    
T  6212029 attatcgatcgagctcgggcgaccgcccgaggtcgccggacggtgaaaccgccc 6212082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 17555032 - 17554979
Alignment:
Q  146 attatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |||||||||||||||||| ||||| |||||| ||| ||||||||||||||||||    
T  17555032 attatcgatcgagcccgggcgaccacccggggtcgtcggacggtgaaaccgccc 17554979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 13392989 - 13393054
Alignment:
Q  134 taatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |||| ||||||| | |||||| |||||||| |||||| ||||| |||| || ||||||||||||||    
T  13392989 taatatgcaaaagtcatcgattgagcccgggcgaccgtccggggtcgctgggcggtgaaaccgccc 13393054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 13396128 - 13396193
Alignment:
Q  134 taatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |||| ||||||| | |||||| |||||||| |||||| ||||| |||| || ||||||||||||||    
T  13396128 taatatgcaaaagtcatcgattgagcccgggcgaccgtccggggtcgctgggcggtgaaaccgccc 13396193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 20113876 - 20113819
Alignment:
Q  97 tttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgat 154  Q
    ||||| ||||||||||||| ||||||||||||||  |||||||  | |||||||||||    
T  20113876 tttttttaagtgtgttaatcggcttttgggttgaacctaatgtaaagaaattatcgat 20113819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 50720476 - 50720529
Alignment:
Q  145 aattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcc 198  Q
    |||||| ||| |||||||| |||||||||| | ||||||| |||||||||||||    
T  50720476 aattattgattgagcccgggcgaccgcccgaggtcgccgggcggtgaaaccgcc 50720529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 3e-76; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 15 - 203
Target Start/End: Complemental strand, 4404175 - 4403987
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  4404175 gagatgaacccatcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaatttttagattgcccaaatttttctttttgtaagtatgttaa 4404076  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatga 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||| | ||||||||| ||||||    
T  4404075 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcctggggtcgccggccagtgaaaccgtccatga 4403987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 34136825 - 34137012
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  34136825 gagatgaacccatcaattgtgtgctaaataaaatttcgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 34136924  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| |||||||||||| ||||||    
T  34136925 ttgacttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgctcggggtcgccagacggtgaaaccacccatg 34137012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 15 - 176
Target Start/End: Original strand, 16788025 - 16788186
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| ||||||| |||||||||||  ||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  16788025 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgagagttttaagattgcccaaatttttctttttgtaagtgtgttaa 16788124  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccggg 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16788125 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggg 16788186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 23402275 - 23402091
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||  ||||| ||||| ||||| ||||| |||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  23402275 gagatgaaccagtcaatagtgtgttaaataaaatttcgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 23402176  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||||||||||||||| ||||||| |||||| |||||||||||||||||| |||||||||||| ||||||| ||||||||||||||    
T  23402175 ttggcttttgggttgggtctaatatgcaaagattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccgccc 23402091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 3648794 - 3648978
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| ||||||| | ||||| |||  ||||| |||||| ||||||| |||| |||||||||||||| ||||||||    
T  3648794 gagatgaacccgtcaatagtgtgctaaataaaattccaaaacctacttgcgtgtgacaattttcagattgcccaaaattttctttttgtaaatgtgttaa 3648893  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    | |||||||||||||||||||||||| |||||||||||||||||||||| |||| | || ||||||||  |||||  ||||||||    
T  3648894 tgggcttttgggttgagtctaatgtgaaaaaattatcgatcgagcccgggcgactgtcccggatcgccatacggtagaaccgccc 3648978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 28 - 160
Target Start/End: Complemental strand, 9877374 - 9877242
Alignment:
Q  28 caattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttgggt 127  Q
    |||| ||||||||||| ||||| ||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  9877374 caatagtgtgctaaataaaatttcgagacctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgggt 9877275  T
Q  128 tgagtctaatgtgcaaaaattatcgatcgagcc 160  Q
    |  ||||||||||||||||||||| ||||||||    
T  9877274 taggtctaatgtgcaaaaattatcaatcgagcc 9877242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 29728386 - 29728570
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| ||||||  |||||||||||  ||| | |||||| ||||||| ||||||||||||||||||| ||||||||    
T  29728386 gagatgaacccgtcaatagtgtgctaaataaaattcgaagacctatttgcgtgtcacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 29728485  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |  |||||||||||||||||||||||||||| ||||||||||||| ||| |||||| ||||| |||||  |||||  ||||||||    
T  29728486 tgagcttttgggttgagtctaatgtgcaaaatttatcgatcgagcacgggcgaccgtccggggtcgccatacggtagaaccgccc 29728570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 15838449 - 15838286
Alignment:
Q  18 atgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattg 117  Q
    |||||||| ||||| ||||||||||| ||||||| |||||||||||  ||||| |||||| ||||||| |||||||||||||| |||| ||||||||| |    
T  15838449 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgaaaattttcagattgcccaaatttttctttt-gtaaatgtgttaatgg 15838351  T
Q  118 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgcc 182  Q
     ||||| |||||||| |||||||||||||||||| |||||||||||  ||||||||||| |||||    
T  15838350 actttttggttgagtttaatgtgcaaaaattatcaatcgagcccgggtgaccgcccggggtcgcc 15838286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 2729196 - 2729380
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    |||||||| |||||||| ||||||||||| |||||  ||||||||||||  | ||||| |||| | |||||  |||  ||||||||| ||||||||||||    
T  2729196 gagatgaatccatcaatagtgtgctaaataaaattttgagacctatttgcgtatgagagttttcaaattgccaaaaaatttctttttataagtgtgttaa 2729295  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    | ||||||||| |||  | ||||||| |||||||||||||||||||||| || ||||||||| ||||||| ||||||||||||||    
T  2729296 tgggcttttggattggatttaatgtgtaaaaattatcgatcgagcccgggcgtccgcccggggtcgccgggcggtgaaaccgccc 2729380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 15 - 195
Target Start/End: Complemental strand, 36408718 - 36408538
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    |||||||| ||  |||| ||||| ||||| |||||| |||||||||| |  ||| |||||||| | |||||  ||| |||||||||||||| ||||||||    
T  36408718 gagatgaatccggcaatagtgtgttaaataaaattctgagacctattagcgtgtaagaattttcaaattgccaaaaattttctttttgtaaatgtgttaa 36408619  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaacc 195  Q
    | | |||||||||||  |||||||||||||||||||||||||||||||| |||||||||| | ||||||| ||||||||||    
T  36408618 tggacttttgggttggatctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgaggtcgccgggcggtgaaacc 36408538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 39914669 - 39914494
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| |||||| |||| ||||||| ||||||||||   ||||| |||||| | ||||| ||||||||| ||||| ||| |||||||||  |||||| ||    
T  39914669 tcaatagtgtgccaaataaaattccaagacctatttacttgtgacaattttcaaattgcccaaattttt-tttttataaatgtgttaatgagctttttgg 39914571  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatga 203  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||   |||||| ||||| ||||||    
T  39914570 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgtccatga 39914494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 163
Target Start/End: Complemental strand, 3435385 - 3435288
Alignment:
Q  68 tgagaatttttagatt--gctcaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgg 163  Q
    |||||||||| |||||  || ||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||| |||||||    
T  3435385 tgagaattttcagattttgcccaaatttttctttttgtaagtgtgttaatgggtttttgggttgggtctaatgtgcaaaaattatcgatcaagcccgg 3435288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 150
Target Start/End: Complemental strand, 42231104 - 42230971
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    |||||||| || ||||| ||||||||||| |||||| |||||||||||| || |||||||||| | ||||| |||||||||||||||||||  |||||||    
T  42231104 gagatgaatccgtcaatagtgtgctaaataaaattctgagacctatttgcatatgagaattttcaaattgcccaaatttttctttttgtaa--gtgttaa 42231007  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattat 150  Q
    | | |||||| ||||  | |||||||||||||||||    
T  42231006 tggacttttgagttggatttaatgtgcaaaaattat 42230971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 159
Target Start/End: Original strand, 40470567 - 40470637
Alignment:
Q  89 aatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagc 159  Q
    ||||||| ||||| ||||||||||||| | ||||||  ||| |||||||||||||||||||||||||||||    
T  40470567 aatttttttttttataagtgtgttaatggacttttgatttgggtctaatgtgcaaaaattatcgatcgagc 40470637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 195
Target Start/End: Original strand, 10397122 - 10397220
Alignment:
Q  97 tttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaacc 195  Q
    ||||| ||| ||||||||| ||||||||||||||  |||||||| | ||||||||||| |||||||| |||  ||||||  ||||||| ||||| ||||    
T  10397122 tttttttaactgtgttaatcggcttttgggttgaacctaatgtgaagaaattatcgattgagcccgggcgagtgcccggagtcgccgggcggtgtaacc 10397220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 1e-75; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 6503569 - 6503756
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||  |||||||||||| |||||||| ||||||||||||||||||||||| |||    
T  6503569 gagatgaacccatcaattgtgtgctaaataaaaatccgagacctatttgcctgtgagaattttcagattgcttaaatttttctttttgtaagtgtgctaa 6503668  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  6503669 ttggcttttgggttgagtctaatttgcaaaaataatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 6503756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 11018212 - 11018399
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||||||||||||||| |||||| ||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  11018212 gagatgaacccgtcaattgtgtgctaaataaaattctgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 11018311  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||  |||||||||||||||||||||||||    
T  11018312 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcctgggcgaccgcccggagtcgccggacggtgaaaccgcccatg 11018399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 45183148 - 45182964
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| |||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  45183148 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgtgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 45183049  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||    
T  45183048 ttggcttttgggttgggtctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccgccc 45182964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 6930894 - 6931078
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||| | ||||| ||||||||||| |||||||||||||||||||  |||||||||||| |||||||  |||||||||||||||||| ||||||||    
T  6930894 gagatgaactcgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcctaaatttttctttttgtaaatgtgttaa 6930993  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |||||||||||||||  ||||||| |||||||||||||||||||||||| |||||| ||||| ||||||| ||||||||||||||    
T  6930994 ttggcttttgggttggatctaatgcgcaaaaattatcgatcgagcccgggcgaccgtccggggtcgccgggcggtgaaaccgccc 6931078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 33041120 - 33040936
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| |||||||||||||||||||  ||||| |||||| | |||| |||||||||||||||||||||||||||||    
T  33041120 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgaaaattttcaaattgttcaaatttttctttttgtaagtgtgttaa 33041021  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    || |||||||||||| ||||||| ||||||||||||| ||||||||||  |||||||||||| ||||||| ||||||||||||||    
T  33041020 ttagcttttgggttgggtctaatatgcaaaaattatcaatcgagcccgagcgaccgcccggggtcgccgggcggtgaaaccgccc 33040936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 27 - 203
Target Start/End: Original strand, 6269438 - 6269614
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| ||||||||||| ||||||| ||||||||||   ||||| |||||| ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  6269438 tcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttggg 6269537  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatga 203  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||   |||||  ||||||||||||    
T  6269538 ttgagtctaatgtgcaaaaattatcgatcgagtccggacgaccgcccgggatcgctacacggtagaaccgcccatga 6269614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 22968456 - 22968631
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| ||||||||||| ||||| | ||||||||||   ||||| |||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  22968456 tcaatagtgtgctaaataaaatttcaagacctatttacgtgtgacaatttttagattgcccaaatttttctttttgtaaatgtgttaatgggcttttggg 22968555  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| ||||   |||||  |||||||||||    
T  22968556 ttaagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgctacacggtagaaccgcccatg 22968631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 27935345 - 27935158
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| || |||||||| ||||||||||||||||||   | |||||||||| ||||||| ||||||||||||||||||||||||||||    
T  27935345 gagatgaacccgtcaatagtatgctaaataaaattccgagacctattttcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 27935246  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    |  |||||||||||| || |||||||||||||||||||||||||||||| |||| |||| || | ||| | |||||||||| ||||||    
T  27935245 tgagcttttgggttgggtttaatgtgcaaaaattatcgatcgagcccgggcgactgcccagggttgccaggcggtgaaaccacccatg 27935158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 27 - 205
Target Start/End: Complemental strand, 19390301 - 19390123
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| ||||||||||| ||||||| ||||||||||   ||||| |||||| ||||||| ||||||||||||||||||| ||||||||| | ||||| ||    
T  19390301 tcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatagacttttagg 19390202  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatgact 205  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||  |||||  |||| |||||||||    
T  19390201 ttgagtctaatgtgcaaaaattatcgatcgaacccggacgaccgcccggggtcgccacacggtagaacctcccatgact 19390123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 33 - 199
Target Start/End: Original strand, 19565519 - 19565685
Alignment:
Q  33 gtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 132  Q
    ||||||||||| |||||||||||||||||||  ||| |||||||| ||||||  ||||||||||||||||||| ||||||||| |  |||| ||||| ||    
T  19565519 gtgtgctaaataaaattccgagacctatttgcgtgtaagaattttcagattgtccaaatttttctttttgtaaatgtgttaatggattttttggttgggt 19565618  T
Q  133 ctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |||||||||||||||||||||| || ||||| |||||||||||||||||||| ||||||||||||||    
T  19565619 ctaatgtgcaaaaattatcgattgaacccgggcgaccgcccgggatcgccgggcggtgaaaccgccc 19565685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 15 - 182
Target Start/End: Original strand, 34084122 - 34084289
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||||||  ||||| |||||| | ||||| ||||||||||||||||||| ||||||||    
T  34084122 gagatgaacccatcaatagtgtgctaaataaaattccaagacctatttgcgtgtgataattttcatattgcccaaatttttctttttgtaaatgtgttaa 34084221  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgcc 182  Q
    | | ||||| |||||| | ||||||||||||||||||||||||| |||| |||||||||||| |||||    
T  34084222 tggactttttggttgaatttaatgtgcaaaaattatcgatcgagtccgggcgaccgcccggggtcgcc 34084289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 39771945 - 39771769
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| |||||  |||| ||||| | ||||||||||   ||||| |||||| ||||||| ||||||||||||||| ||| ||||||||| ||||||||||    
T  39771945 tcaatagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgggcttttggg 39771846  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatga 203  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||   |||||| ||||||||||||    
T  39771845 ttgagtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatga 39771769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 33 - 199
Target Start/End: Complemental strand, 45336023 - 45335858
Alignment:
Q  33 gtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 132  Q
    ||||||||||| ||||||| |||||||||||  ||| |||||||| ||||||| || |||||||||||||||| |||||||| || ||||| ||||| ||    
T  45336023 gtgtgctaaataaaattccaagacctatttgcgtgtaagaattttcagattgcccagatttttctttttgtaaatgtgttaa-tgactttttggttgggt 45335925  T
Q  133 ctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |||||||| ||||||||||||| ||| |||| |||||||||| | ||||||| ||||||||||||||    
T  45335924 ctaatgtgtaaaaattatcgattgagtccgggcgaccgcccgaggtcgccgggcggtgaaaccgccc 45335858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 35514429 - 35514249
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| |||||| |||| ||||||| |||||||||||   ||||||||||| | ||||  |||||||||||||||||    |||||||    
T  35514429 gagatgaacccgtcaatagtgtgcaaaataaaattcctagacctatttgcgagtgagaattttcatattgtccaaatttttctttttgt----gtgttaa 35514334  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    | | |||||||||||  |||| | ||| |||||||||||||||||||||||||||| ||||| ||||||| ||||||||| ||||    
T  35514333 tggacttttgggttggatctagtatgcgaaaattatcgatcgagcccggacgaccgtccggggtcgccgggcggtgaaactgccc 35514249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 15 - 169
Target Start/End: Original strand, 40081741 - 40081893
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||  |||| || ||| |||||||  ||||| |||||| | ||||| ||||||||||||||||||| ||||||||    
T  40081741 gagatgaacccgtcaatagtgtgctaaaaaaaat-ccaagatctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaa 40081839  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgacc 169  Q
    |  |||||||| ||||||||||||| ||||||||||||||||||||||| |||||    
T  40081840 tgagcttttgg-ttgagtctaatgttcaaaaattatcgatcgagcccgggcgacc 40081893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 5135364 - 5135285
Alignment:
Q  87 caaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacg 166  Q
    |||||||||||||||||||||||||||||  |||||| ||||| ||||||||| ||||||| |||||||||||| |||||    
T  5135364 caaatttttctttttgtaagtgtgttaatgagcttttaggttgggtctaatgtacaaaaataatcgatcgagcctggacg 5135285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 22922214 - 22922141
Alignment:
Q  125 ggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcc 198  Q
    |||||||| |||||||||||||| ||||||||||||||  ||||||||||||||||||  |||||| |||||||    
T  22922214 ggttgagtttaatgtgcaaaaatgatcgatcgagcccgagcgaccgcccgggatcgccatacggtggaaccgcc 22922141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 6891035 - 6890981
Alignment:
Q  145 aattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||||||||||||||||||| |||||||||||  ||||||| ||||||||||||||    
T  6891035 aattatcgatcgagcccgggcgaccgcccggtgtcgccgggcggtgaaaccgccc 6890981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 5354758 - 5354692
Alignment:
Q  133 ctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||||||||  |||||||  |||||||||||| |||||||||||| ||||||| ||||||||| ||||    
T  5354758 ctaatgtgagaaaattaaggatcgagcccgggcgaccgcccggggtcgccgggcggtgaaactgccc 5354692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 137; Significance: 2e-71; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 31680534 - 31680350
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  31680534 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 31680435  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||||||||||||||| |||||||| | |||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||    
T  31680434 ttggcttttgggttgggtctaatgcggaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccgccc 31680350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 12278860 - 12279044
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||  ||||| ||||||||||| |||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  12278860 gagatgaacctgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 12278959  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||    
T  12278960 ttggcctttgggttgggtctaatgtgcaaaaattatcgatcgagtccgggcgaccgcccgggatcgccgggcggtgaaaccgccc 12279044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 15 - 204
Target Start/End: Original strand, 17332551 - 17332740
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    |||||||| || ||||| ||||||||||| |||||||||||||||||||  ||||| |||||| ||||||| ||||||||||||||||||||||||||||    
T  17332551 gagatgaatccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgaaaattttcagattgcccaaatttttctttttgtaagtgtgttaa 17332650  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatgac 204  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| ||||    
T  17332651 ttggcttttgggttgggtctaatatgcaaaaattatcgatcgagcccgggcgaacgcccggggtcgccgggcggtgaaaccgcccctgac 17332740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 31501716 - 31501900
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||| ||||||| ||||||||||| ||||| |||||||||||||  || ||||||||| ||||||| ||||||||||||||||||||||||||||    
T  31501716 gagatgaactcatcaatagtgtgctaaataaaatttcgagacctatttgcgtgcgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 31501815  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| | | |||||||| ||||||| ||||||||||||||    
T  31501816 ttggcttttgggttgggtctaatgtgcaaaaattatcgatcgagcccgggcaatcgcccggggtcgccgggcggtgaaaccgccc 31501900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 37254808 - 37254621
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| |||||  |||||||||| |||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  37254808 gagatgaacccgtcaataatgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 37254709  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||| ||||||||||| |||||||||||||||||||||||||||||| || |||||||| ||| ||||||  |||||||||||||||||    
T  37254708 ttgacttttgggttgggtctaatgtgcaaaaattatcgatcgagcctgggcgaccgcctggggtcgccgagcggtgaaaccgcccatg 37254621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 15 - 168
Target Start/End: Complemental strand, 33430488 - 33430335
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| |||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  33430488 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 33430389  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgac 168  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||| ||||    
T  33430388 ttggcttttgggttgggtctaatgcgcaaaaattatcgatcgagcccgggcgac 33430335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 18 - 199
Target Start/End: Complemental strand, 10034091 - 10033910
Alignment:
Q  18 atgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattg 117  Q
    |||||||| ||||| ||||||||||| ||||||| |||||||||||  ||||| |||||| ||||||| ||||||||||||||||||| ||||||||| |    
T  10034091 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 10033992  T
Q  118 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||| |||||  |||||  ||||||||    
T  10033991 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgatcgtccggggtcgccatacggtagaaccgccc 10033910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 13818144 - 13817960
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||| ||| ||||| ||||||||||| || |||| |||||||||||  ||||| |||||| ||||||| ||||||||||||||||||| ||||||||    
T  13818144 gagatgagcccgtcaatagtgtgctaaataaatttccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 13818045  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||  |||||  ||||||||    
T  13818044 tgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgagcgaccgcccggggtcgccatacggtagaaccgccc 13817960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 33 - 202
Target Start/End: Original strand, 36293639 - 36293808
Alignment:
Q  33 gtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 132  Q
    ||||||||||| ||||||| ||||||||||   ||||| |||||| ||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  36293639 gtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttgagt 36293738  T
Q  133 ctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||||||| |||||||||||||||||| |||||||||||| |||| |||||  |||||  |||||||||||    
T  36293739 ctaatgtacaaaaattatcgatcgagtccggacgaccgctcggggtcgccacacggtagaaccgcccatg 36293808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 39434851 - 39434675
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| ||||||||||| ||||||  ||||||||||  |||||| |||||| ||||||| |||||||||| |||||||| ||||||||| ||||||||||    
T  39434851 tcaatagtgtgctaaataaaattcaaagacctatttacatgtgacaattttcagattgcccaaatttttcattttgtaaatgtgttaatgggcttttggg 39434752  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatga 203  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||| || |||||  |||||  ||||||||||||    
T  39434751 ttgagtctaatgtgaaaaaattatcgatcgagcccgggcgaccgcccagggtcgccacacggtagaaccgcccatga 39434675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 170
Target Start/End: Original strand, 39657509 - 39657661
Alignment:
Q  18 atgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattg 117  Q
    |||||||| ||||| ||||||||||| ||||||| |||||||||||  ||||| |||||| ||||||| ||||||||||||||||||| |||||||||      
T  39657509 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatga 39657608  T
Q  118 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccg 170  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  39657609 gcttttgggttgagtctaatgtgcaaaaattatcaatcgagcccgaacgaccg 39657661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 27 - 163
Target Start/End: Complemental strand, 16155152 - 16155016
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| ||||||||||| ||||||| |||||||||||  ||||| |||||| |||||||  |||||||||||||| ||| ||||||||| ||||||||||    
T  16155152 tcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcctaaatttttctttttataaatgtgttaatgggcttttggg 16155053  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccgg 163  Q
    |||||||||||||||||||||||||||||||||||||    
T  16155052 ttgagtctaatgtgcaaaaattatcgatcgagcccgg 16155016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 174
Target Start/End: Complemental strand, 19986106 - 19985947
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||  ||||| ||||| ||||| ||||| | |||||||||||  ||||| |||||||||||| | ||||||||||||||||||| |||| |||    
T  19986106 gagatgaacctgtcaatagtgtgttaaataaaatttcaagacctatttgcgtgtgataatttttagattacccaaatttttctttttgtaaatgtgctaa 19986007  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccg 174  Q
    | | |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  19986006 tggacttttgggttgaatctaatgtgcaaaaattatcgatcgagctcggacgaccgcccg 19985947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 36291538 - 36291354
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||| ||||| |||||| ||||||||||||  ||| | |||||| ||||||| ||||||||||||||||||| ||||||||    
T  36291538 gagatgaacccgtcaatagtgtgttaaataaaattctgagacctatttgtgtgtaataattttgagattgcccaaatttttctttttgtaaatgtgttaa 36291439  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |   ||||| ||||   ||||||||||||||||||| |||||| |||||||||||||||||  ||| ||| ||||||||||||||    
T  36291438 tgaacttttaggttagatctaatgtgcaaaaattattgatcgaacccggacgaccgcccggagtcggcgggcggtgaaaccgccc 36291354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 26283330 - 26283505
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| |||||| |||| ||||||| ||||||||||   ||||| |||||| ||||||| ||||||||||||||| ||| |||||||||   ||||| ||    
T  26283330 tcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgaactttttgg 26283429  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| | ||||   |||||| |||||||||||    
T  26283430 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgaggtcgctacacggtggaaccgcccatg 26283505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 18 - 152
Target Start/End: Original strand, 16333879 - 16334013
Alignment:
Q  18 atgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattg 117  Q
    ||||| || ||||| ||||||||||| ||||||| |||||||||||  ||||| |||||| ||||||| ||||||||||||||||||| ||||||||| |    
T  16333879 atgaatccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 16333978  T
Q  118 gcttttgggttgagtctaatgtgcaaaaattatcg 152  Q
    ||||||||||||| |||||||||||||||||||||    
T  16333979 gcttttgggttgaatctaatgtgcaaaaattatcg 16334013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 15 - 165
Target Start/End: Complemental strand, 43069044 - 43068894
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    |||||||| ||  |||| ||||||||||| |||||||||||| |||||  |||| |||||||| ||||||| ||||||||||||||||||| ||||||||    
T  43069044 gagatgaatccggcaatagtgtgctaaataaaattccgagacttatttacatgtaagaattttcagattgcccaaatttttctttttgtaaatgtgttaa 43068945  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggac 165  Q
    | | ||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  43068944 tggacttttgggttgggtctaatgtgaaaaaattattgatcgagcccggac 43068894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 16 - 176
Target Start/End: Original strand, 1776377 - 1776537
Alignment:
Q  16 agatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaat 115  Q
    |||||||||  || || ||||||||||| ||||||| |||||||||||  ||||| |||||| | ||||| ||||||||||||||||||| |||||||||    
T  1776377 agatgaacctgtcgatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaat 1776476  T
Q  116 tggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccggg 176  Q
     | ||||| |||||| | |||||| ||||||||||||||||||||||| ||||||||||||    
T  1776477 ggactttttggttgactttaatgtacaaaaattatcgatcgagcccgggcgaccgcccggg 1776537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 33 - 202
Target Start/End: Original strand, 3155649 - 3155818
Alignment:
Q  33 gtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 132  Q
    ||||||||||| ||||||| ||| |||||||  ||||| |||||| ||||||  ||||||||||||||| ||| ||||||||| | ||||| ||||||||    
T  3155649 gtgtgctaaataaaattccaagatctatttgcgtgtgacaattttcagattgtccaaatttttctttttataaatgtgttaatggacttttaggttgagt 3155748  T
Q  133 ctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    | |||||||||||||||| |||||||||||  ||||||||||||||||||  ||| |  |||||||||||    
T  3155749 cgaatgtgcaaaaattattgatcgagcccgagcgaccgcccgggatcgccatacgatagaaccgcccatg 3155818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 28801382 - 28801300
Alignment:
Q  87 caaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgacc 169  Q
    ||||||||||||||||||||||||||||| ||||||||| |||  ||||||||||||||||||||||||||||| || |||||    
T  28801382 caaatttttctttttgtaagtgtgttaatgggcttttggtttggatctaatgtgcaaaaattatcgatcgagccagggcgacc 28801300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 199
Target Start/End: Complemental strand, 202724 - 202622
Alignment:
Q  97 tttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccg 196  Q
    ||||||| ||||| ||||| ||||||||||||    ||||||| || |||||||||||||||||||| ||||| ||  || ||| ||| |||||||||||    
T  202724 tttttgttagtgtcttaatgggcttttgggttcgacctaatgtacacaaattatcgatcgagcccgggcgaccacctagggtcgtcgggcggtgaaaccg 202625  T
Q  197 ccc 199  Q
    |||    
T  202624 ccc 202622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 152 - 199
Target Start/End: Original strand, 26543902 - 26543949
Alignment:
Q  152 gatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |||||||||||| |||||||||||| ||||||| |||| |||||||||    
T  26543902 gatcgagcccgggcgaccgcccggggtcgccgggcggtaaaaccgccc 26543949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 6e-68; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 15 - 205
Target Start/End: Original strand, 34389056 - 34389246
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| || ||  |||||||||| |||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  34389056 gagatgaacccgtcgataatgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 34389155  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatgact 205  Q
    || |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||| |||||||||||    
T  34389156 ttagcttttgggttgggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaatcgcccatgact 34389246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 37002144 - 37002328
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| ||||||| |||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  37002144 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 37002243  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||| ||||||| ||| |||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| ||||||||||||||    
T  37002244 ttgacttttggattgggtctaatgtgcaaaaattatcgatcgagaccgaacgaccgcccggggtcgccgggcggtgaaaccgccc 37002328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 43184468 - 43184652
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| |||||| ||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  43184468 gagatgaacccgtcaatagtgtgctaaataaaattcagagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtatgttaa 43184567  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |||||||||||||| ||||| ||| | |||||||||||||||||||||  ||||||||||| |||||||| ||||||||||||||    
T  43184568 ttggcttttgggttaagtctgatgcgtaaaaattatcgatcgagcccgagcgaccgcccggaatcgccgggcggtgaaaccgccc 43184652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 5555651 - 5555466
Alignment:
Q  18 atgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattg 117  Q
    |||||||| ||||| ||||||||||| ||||||| |||||||||||  ||||| |||||| ||||||| ||||||||||||||||||| || |||||| |    
T  5555651 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgcgttaatgg 5555552  T
Q  118 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatga 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||  |||||  ||||||||||||    
T  5555551 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgcccatga 5555466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 40920003 - 40920154
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||||||| ||||||  ||||||||||||||||||| ||||||||    
T  40920003 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgtccaaatttttctttttgtaaatgtgttaa 40920102  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacg 166  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  40920103 ttggcttttgggttaaatctaatgtgcaaaaattatcgatcgagcccggacg 40920154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 15 - 173
Target Start/End: Complemental strand, 35090335 - 35090177
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    |||||||| || ||||| ||||||||||| |||||||||||||||||||  |||||||||||| ||||| | ||||||||||||||||||||||||||||    
T  35090335 gagatgaatccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattacccaaatttttctttttgtaagtgtgttaa 35090236  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgccc 173  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||    
T  35090235 ttggcttttgggttgggtctaatgtgcaaaaattattgatcgagcccgggcgaccgccc 35090177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 26624913 - 26624728
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| |||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  26624913 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 26624814  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcg-atcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||  ||||||| ||| ||||||| |||||||||||||| ||||||||| | |||||||||||| | ||||| ||||||||||||||    
T  26624813 ttaacttttggattgggtctaatatgcaaaaattatcgaatcgagcccaggcgaccgcccggggttgccgggcggtgaaaccgccc 26624728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 3114099 - 3114283
Alignment:
Q  18 atgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattg 117  Q
    |||||||| ||||| ||||||||||| ||||||| |||||||||||  ||||| |||||| ||||||| ||||||||||||||||||| ||||||||| |    
T  3114099 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 3114198  T
Q  118 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| || ||  |||||  |||||||||||    
T  3114199 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgtccggggtcaccatacggtagaaccgcccatg 3114283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 17 - 199
Target Start/End: Original strand, 8867733 - 8867915
Alignment:
Q  17 gatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaatt 116  Q
    |||||| || ||||| ||||||||||| |||||||||||||||||||  ||||| ||||||  |||||| ||||||||||||||||||| ||| ||||||    
T  8867733 gatgaatccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgaaaattttccgattgcccaaatttttctttttgtaaatgtattaatt 8867832  T
Q  117 ggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||||||||| ||| ||||||| ||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||| ||||    
T  8867833 ggcttttggattgggtctaatatgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaactgccc 8867915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 7002892 - 7002708
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| |||||||| ||||||||||  |||||||||||||||||||  ||||||||| |||||||| |||||||||    
T  7002892 gagatgaacccgtcaatagtgtgctaaataaaattccgtgacctatttgcgtgtgagaatttttagattgtccaaatttttatttttgtatgtgtgttaa 7002793  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||||||||||||||| || ||||||  ||||||  |||||||||||||| ||||||| |||| ||||||| ||||||||||||||    
T  7002792 ttggcttttgggttgggtgtaatgtagaaaaatcgtcgatcgagcccgggcgaccgctcggggtcgccgggcggtgaaaccgccc 7002708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 7048763 - 7048579
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| |||||||| ||||||||||  |||||||||||||||||||  ||||||||| |||||||| |||||||||    
T  7048763 gagatgaacccgtcaatagtgtgctaaataaaattccgtgacctatttgcgtgtgagaatttttagattgtccaaatttttatttttgtatgtgtgttaa 7048664  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||||||||||||||| || ||||||  ||||||  |||||||||||||| ||||||| |||| ||||||| ||||||||||||||    
T  7048663 ttggcttttgggttgggtgtaatgtagaaaaatcgtcgatcgagcccgggcgaccgctcggggtcgccgggcggtgaaaccgccc 7048579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 14777119 - 14777294
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| ||||||||||| ||||||| ||||||||||   ||||| |||||| ||||||| ||||||||||||||||||| |||||||||  |||||||||    
T  14777119 tcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgagcttttggg 14777218  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||   |||||  |||||||||||    
T  14777219 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgggatcgctacacggtagaaccgcccatg 14777294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 16 - 166
Target Start/End: Original strand, 38638237 - 38638387
Alignment:
Q  16 agatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaat 115  Q
    |||||||||| ||||| ||||||||||| |||||||||||||||||||  |||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  38638237 agatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaat 38638336  T
Q  116 tggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacg 166  Q
    || |||||||||||  |||||||||||||||||||| ||||||| ||||||    
T  38638337 tgacttttgggttggatctaatgtgcaaaaattatcaatcgagctcggacg 38638387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 33685731 - 33685547
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||| ||||| ||||| ||||||||||| |||||  ||||| ||||||  | |||||||||| ||||||| ||||||||||||||||||||||||||||    
T  33685731 gagataaacccgtcaatagtgtgctaaataaaattatgagacatatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 33685632  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    | ||||||||||||| || |||||||||||||||||||||||||||||  |||| ||| ||| ||||||| ||||||||||||||    
T  33685631 tgggcttttgggttgggtttaatgtgcaaaaattatcgatcgagcccgagcgactgcctggggtcgccgggcggtgaaaccgccc 33685547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 36630983 - 36630816
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||| | ||||||| |||||||||||  ||||| |||||| ||||||| ||||||||||||||||||| ||||||||    
T  36630983 gagatgaacccgtcaatagtgtgctaactaaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 36630884  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgcc 182  Q
    | | ||||| |||||||| |||||||||||||||||||||||||||||| |||||| ||||| |||||    
T  36630883 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccgggcgaccgtccggggtcgcc 36630816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 15 - 163
Target Start/End: Complemental strand, 36658348 - 36658200
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| |||||||||||||||||||  |||||||||||| ||||||| ||||||||| ||||||| ||| ||||||    
T  36658348 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttatttttgttagtatgttaa 36658249  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgg 163  Q
    ||||||||| ||||| ||| |||||||||||||||||||||||| ||||    
T  36658248 ttggcttttcggttgggtccaatgtgcaaaaattatcgatcgagtccgg 36658200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 8394292 - 8394125
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||| ||||| ||||| ||||||||||| ||||||| ||||||||||   ||||| |||||| ||||||| |||||||||| |||||||| ||||||||    
T  8394292 gagataaacccgtcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttccttttgtaaatgtgttaa 8394193  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgcc 182  Q
    | | ||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||| |||||    
T  8394192 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 8394125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 37966614 - 37966666
Alignment:
Q  146 attatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcc 198  Q
    |||||||||||||| |||||||||||| | | ||||||| |||||||||||||    
T  37966614 attatcgatcgagctcggacgaccgcctgaggtcgccgggcggtgaaaccgcc 37966666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 10868525 - 10868583
Alignment:
Q  67 gtgagaatttttagatt--gctcaaatttttctttttgtaagtgtgttaattggctttt 123  Q
    ||||||||||| |||||  || ||||||||||||||||||| ||||||||| |||||||    
T  10868525 gtgagaattttcagattttgcccaaatttttctttttgtaaatgtgttaatgggctttt 10868583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 137 - 184
Target Start/End: Original strand, 10876829 - 10876876
Alignment:
Q  137 tgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccgg 184  Q
    ||||||||||||||||||||||||||| ||||| | |||| |||||||    
T  10876829 tgtgcaaaaattatcgatcgagcccgggcgaccacacgggttcgccgg 10876876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 195
Target Start/End: Complemental strand, 26502899 - 26502797
Alignment:
Q  92 ttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtga 191  Q
    |||| |||||||| |||||||||| ||||||||||||| |  |||| ||||||||   |||||||||||||| |||| ||| ||| |||||  ||||||     
T  26502899 ttttttttttgta-gtgtgttaatgggcttttgggttgggcttaatatgcaaaaaaattcgatcgagcccgggcgactgcctggggtcgccacacggtgg 26502801  T
Q  192 aacc 195  Q
    ||||    
T  26502800 aacc 26502797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 92 - 195
Target Start/End: Original strand, 26589815 - 26589917
Alignment:
Q  92 ttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtga 191  Q
    |||| |||||||| |||||||||| ||||||||||||| |  |||| ||||||||   |||||||||||||| |||| ||| ||| |||||  ||||||     
T  26589815 ttttttttttgta-gtgtgttaatgggcttttgggttgggcttaatatgcaaaaaaattcgatcgagcccgggcgactgcctggggtcgccacacggtgg 26589913  T
Q  192 aacc 195  Q
    ||||    
T  26589914 aacc 26589917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 1e-66; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 45418750 - 45418566
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| |||||| ||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  45418750 gagatgaacccgtcaatagtgtgctaaataaaattcagagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 45418651  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |||||||||||||||  ||||||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||    
T  45418650 ttggcttttgggttggatctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccgccc 45418566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 16 - 204
Target Start/End: Complemental strand, 8147518 - 8147329
Alignment:
Q  16 agatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaattttt-agattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    |||||||||| ||||| ||||| ||||| ||||||||||| |||||||  ||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  8147518 agatgaacccgtcaatagtgtgttaaataaaattccgagatctatttgcgtgtgagaatttttcagattgcccaaatttttctttttgtaagtgtgttaa 8147419  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatgac 204  Q
    ||| |||||| |||| |||||||||||||| |||||||||||||||||| |||||||||||| ||||||| |||||||||||||| ||||    
T  8147418 ttgacttttgagttgggtctaatgtgcaaagattatcgatcgagcccgggcgaccgcccggggtcgccgggcggtgaaaccgcccctgac 8147329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 18 - 199
Target Start/End: Original strand, 8059336 - 8059517
Alignment:
Q  18 atgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattg 117  Q
    |||||||| ||||||||||||||||| ||||||||||||| |||||  |||||||||||| | ||||  |||||||||||||||||||||||||||||||    
T  8059336 atgaacccgtcaattgtgtgctaaataaaattccgagaccgatttgtgtgtgagaattttcaaattggccaaatttttctttttgtaagtgtgttaattg 8059435  T
Q  118 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||||||||||||| ||||||||||||||||||||||| ||||| || ||| || ||||| ||| ||| ||||||||||||||    
T  8059436 gcttttgggttgactctaatgtgcaaaaattatcgattgagcctgggcgatcggccggggtcgtcgggcggtgaaaccgccc 8059517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 771165 - 770977
Alignment:
Q  16 agatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaat 115  Q
    |||||||||| |||||  |||||||||| || ||||||||||||||||  |||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  771165 agatgaacccgtcaataatgtgctaaataaagttccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaat 771066  T
Q  116 tggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccggga-----tcgccggacggtgaaaccgccc 199  Q
     ||||||| ||||| ||||||||||||||| ||||||||||||||||| |||||||||||||     ||||||| ||||||||||||||    
T  771065 gggctttttggttgggtctaatgtgcaaaagttatcgatcgagcccgggcgaccgcccgggatccggtcgccgggcggtgaaaccgccc 770977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 12756837 - 12756985
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| |||||||||||| ||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12756837 gagatgaacccgtcaatagtgtgctaaataaaattccgagacttatttgcgtgtgagaattttcagattgctcaaatttttctttttgtaagtgtgttaa 12756936  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgg 163  Q
    ||||||||||||||| |||||||| |||||||||||||||||| |||||    
T  12756937 ttggcttttgggttgggtctaatgcgcaaaaattatcgatcgaacccgg 12756985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 18 - 202
Target Start/End: Complemental strand, 35962879 - 35962695
Alignment:
Q  18 atgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattg 117  Q
    |||||||| ||||| ||||||||||| ||||||| |||||||||||  ||||| |||||| ||||||| |||| |||||||||||||| |||||||||      
T  35962879 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaaattttctttttgtaaatgtgttaataa 35962780  T
Q  118 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||  |||||  |||||||||||    
T  35962779 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcctggggtcgccatacggtagaaccgcccatg 35962695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 44084603 - 44084787
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| |||||| ||||||||||||  | |||||||||| ||||||| ||||||||||||||||||||||||||||    
T  44084603 gagatgaacccgtcaatagtgtgctaaataaaattctgagacctatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 44084702  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |   ||||||| ||| || |||||||||||||||||||||||||||||| |||| ||||||| ||||||| ||||||||||||||    
T  44084703 tgaacttttggattgggtttaatgtgcaaaaattatcgatcgagcccgggcgactgcccggggtcgccgggcggtgaaaccgccc 44084787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 202
Target Start/End: Complemental strand, 42440150 - 42439966
Alignment:
Q  18 atgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattg 117  Q
    ||||| || ||||| ||||||||||| ||||| | |||||||||||  ||||| |||||| ||||||| ||||||||||||||||||| ||||||||| |    
T  42440150 atgaatccgtcaatagtgtgctaaataaaattgcaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 42440051  T
Q  118 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||  |||||  |||||||||||    
T  42440050 gcttttgggtttagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgcccatg 42439966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 18981780 - 18981596
Alignment:
Q  18 atgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattg 117  Q
    |||||||| ||||  ||||||||||| ||||||| |||||||||||  ||||| |||||||| ||||| ||||||||||||||||||| ||| ||||| |    
T  18981780 atgaacccgtcaacagtgtgctaaataaaattccaagacctatttgcgtgtgacaatttttaaattgcccaaatttttctttttgtaaatgttttaatgg 18981681  T
Q  118 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatga 203  Q
     ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||  |||||  ||||||||||||    
T  18981680 acttttgggttgagtctaatgtgcaaaaattatcaatcgagcccggacgaccgcccggg-tcgccatacggtagaaccgcccatga 18981596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 27 - 176
Target Start/End: Original strand, 41251646 - 41251795
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| ||||||||||| ||||||| ||||||||||   ||||| |||||| ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  41251646 tcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttggg 41251745  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccggg 176  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  41251746 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggg 41251795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 174
Target Start/End: Original strand, 31581622 - 31581781
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| ||||||| |||||||||||  ||||| |||||| ||||||| ||||||||||||||||||| ||||||||    
T  31581622 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 31581721  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccg 174  Q
    | |||||||||| |||||||||| |||||||| ||||| ||||||| || ||||||||||    
T  31581722 tgggcttttgggatgagtctaatatgcaaaaagtatcgctcgagcctgggcgaccgcccg 31581781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 45 - 202
Target Start/End: Original strand, 2958131 - 2958287
Alignment:
Q  45 aaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaa 144  Q
    ||||||| |||||||||||  ||||| |||||| ||||| | ||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||| ||    
T  2958131 aaattccaagacctatttgcgtgtgacaattttcagattacccaaatttttctctttgtaaatgtgttaatgggcttttgggttgagtctaatgtgc-aa 2958229  T
Q  145 aattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    |||||||||||||||||||||||||||||||| |||||  |||||  |||||||||||    
T  2958230 aattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcccatg 2958287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 17445053 - 17445226
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| ||||||||||| ||||||| ||||||||||   ||||| |||||| ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  17445053 tcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttggg 17445152  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    |||||||||  |||||||||||||||||||||| ||| |||||||||| | |||||  |||||  |||||||||||    
T  17445153 ttgagtcta--gtgcaaaaattatcgatcgagctcgggcgaccgcccgaggtcgccacacggtagaaccgcccatg 17445226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 32127144 - 32127328
Alignment:
Q  18 atgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattg 117  Q
    |||||||| ||||| ||||||||||| ||||||| ||| |||||||  ||||| |||||| |||||||  |||||||||||||||||| |||||||||      
T  32127144 atgaacccgtcaatagtgtgctaaataaaattccaagatctatttgcgtgtgacaattttcagattgcctaaatttttctttttgtaaatgtgttaatga 32127243  T
Q  118 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    |||||||||| |||| ||||||||||||||||| |||||||||||| |||||||||||| |||||  ||| |  |||||||||||    
T  32127244 gcttttgggtcgagtttaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 32127328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 6403816 - 6403991
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| |||||| |||| ||||||| ||||||||||   ||||| |||||| ||||||| ||||||||||||||| ||| |||||||||   ||||| ||    
T  6403816 tcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgaactttttgg 6403915  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||   |||||| |||||||||||    
T  6403916 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 6403991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 173
Target Start/End: Complemental strand, 16405764 - 16405609
Alignment:
Q  18 atgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattg 117  Q
    |||||||| ||||| ||||||||||| ||||||| |||| ||||||  ||||| |||||| ||||||  ||||||||||||||| ||| |||||||||      
T  16405764 atgaacccgtcaatagtgtgctaaataaaattccaagacttatttgcgtgtgacaattttcagattgtccaaatttttctttttataaatgtgttaatga 16405665  T
Q  118 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgccc 173  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||    
T  16405664 gcttttgggttgagtctaacgtgcaaaaattatcgattgagcccgggcgaccgccc 16405609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 26162702 - 26162847
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| |||||  |||||||||| |   |||||||||||||||  | |||||||||||||||||| ||||||||||||||||||||||||||||    
T  26162702 gagatgaacccgtcaataatgtgctaaataa---tccgagacctatttgtgtttgagaatttttagattgcccaaatttttctttttgtaagtgtgttaa 26162798  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgg 163  Q
    | || ||||||||||| | ||||||| ||||||||||||  ||||||||    
T  26162799 tgggtttttgggttgaatttaatgtgtaaaaattatcgaaggagcccgg 26162847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 2286026 - 2285862
Alignment:
Q  18 atgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattg 117  Q
    |||||| | ||||| ||||||||||| ||||||| | |||||||||  ||||| |||||| |||||||||||||||||| ||| |||| ||||||||| |    
T  2286026 atgaacacgtcaatagtgtgctaaataaaattccaaaacctatttgcgtgtgacaattttcagattgctcaaatttttcctttcgtaaatgtgttaatag 2285927  T
Q  118 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgcc 182  Q
     ||||| |||||  | |||||||||||||||||||||||| || | | ||||| ||| |||||||    
T  2285926 actttttggttggatttaatgtgcaaaaattatcgatcgaacctgaatgaccgtccgagatcgcc 2285862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 82 - 184
Target Start/End: Complemental strand, 26238056 - 26237955
Alignment:
Q  82 ttgctcaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgc 181  Q
    |||| ||||||||||||||||||||||||||||| | ||||||| |||  |||||| |||||||| |||||||||||||||| |||||||||||| ||||    
T  26238056 ttgcccaaatttttctttttgtaagtgtgttaatggacttttggtttgcatctaatttgcaaaaa-tatcgatcgagcccgggcgaccgcccggggtcgc 26237958  T
Q  182 cgg 184  Q
    |||    
T  26237957 cgg 26237955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 66 - 195
Target Start/End: Original strand, 4555260 - 4555390
Alignment:
Q  66 tgtgagaatttttagatt--gctcaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgg 163  Q
    |||||||||||| |||||  || |||| |||||||||||||||||||||||   |||||||||||| || | ||||||||||||||||||||||| || |    
T  4555260 tgtgagaattttcagattttgcccaaaattttctttttgtaagtgtgttaacgagcttttgggttgggtttgatgtgcaaaaattatcgatcgagtccag 4555359  T
Q  164 acgaccgcccgggatcgccggacggtgaaacc 195  Q
     |||||||||| ||||||||| ||||| ||||    
T  4555360 -cgaccgcccgagatcgccgggcggtggaacc 4555390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 7072627 - 7072710
Alignment:
Q  92 ttttctttttgtaagtgtgt--taattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgccc 173  Q
    |||||||||| |||||||||  |||| |||||||||||||||| ||||||  |||||||||||||||||||||| |||||||||    
T  7072627 ttttctttttataagtgtgtgttaatgggcttttgggttgagtttaatgtaaaaaaattatcgatcgagcccgggcgaccgccc 7072710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 162
Target Start/End: Complemental strand, 34906028 - 34905969
Alignment:
Q  103 taagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccg 162  Q
    ||||||||||||| ||||||||||||  |  |||||||||||||||||||||||||||||    
T  34906028 taagtgtgttaatgggcttttgggttaggcttaatgtgcaaaaattatcgatcgagcccg 34905969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 34523270 - 34523223
Alignment:
Q  152 gatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |||||||||||| |||||||||||| ||||||| |||| |||||||||    
T  34523270 gatcgagcccgggcgaccgcccggggtcgccgggcggtaaaaccgccc 34523223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 2e-64; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 28996897 - 28996713
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| |||||||||||||||||||  |||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  28996897 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 28996798  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||| ||||| ||||| |||||||| |||||||||||||||||||| ||| |||||||||||| ||||||| ||||||||||||||    
T  28996797 ttgacttttaggttgggtctaatgcgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgccgggcggtgaaaccgccc 28996713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 204 - 332
Target Start/End: Complemental strand, 32666470 - 32666342
Alignment:
Q  204 ctccatcctaccacttccaacacgatccacattagttggaagtgagggttctctttcaggctgtttagaccatccaaattgattcctctcactggaagta 303  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  32666470 ctccatcctaccacttccaacacggtccacattagttggaagtgagggttctctttcaggctgtttagaccatccaaattgattcctctcactggaagca 32666371  T
Q  304 tatgttatttcatcctcaaaggtattatc 332  Q
    |||||||||||||||||||||||||||||    
T  32666370 tatgttatttcatcctcaaaggtattatc 32666342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 18339273 - 18339106
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||||||| ||||||| |||| |||||||||||||||||||||||    
T  18339273 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaa 18339174  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgcc 182  Q
    ||||||||| | ||| |||||||||||||||||||| |||||||||||| |||||||||||| |||||    
T  18339173 ttggcttttagattgggtctaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgcc 18339106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 18 - 202
Target Start/End: Original strand, 34948761 - 34948945
Alignment:
Q  18 atgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattg 117  Q
    |||||||| ||||| ||||||||||| ||||| | ||| |||||||  ||||| |||||| ||||||| ||||||||||||||||||| ||||||||| |    
T  34948761 atgaacccgtcaatagtgtgctaaataaaatttcaagatctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 34948860  T
Q  118 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||| |||||  |||||  |||||||||||    
T  34948861 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcctgggcgaccgcctggggtcgccatacggtagaaccgcccatg 34948945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 33 - 199
Target Start/End: Complemental strand, 29743432 - 29743266
Alignment:
Q  33 gtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttgggttgagt 132  Q
    ||||||||||| |||||||||||||||||||  ||| |||||||| ||||||| ||||||||||||| ||||| |||||||||   ||||| ||||| ||    
T  29743432 gtgtgctaaataaaattccgagacctatttgcgtgtaagaattttcagattgcccaaatttttctttctgtaaatgtgttaatgaactttttggttgggt 29743333  T
Q  133 ctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |||||||||||||||||||||| |||||||| | |||||||||||||| ||||||||||||||||||    
T  29743332 ctaatgtgcaaaaattatcgattgagcccgggcaaccgcccgggatcgtcggacggtgaaaccgccc 29743266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 13837985 - 13837800
Alignment:
Q  18 atgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattg 117  Q
    |||||||| ||||| ||||||||||| ||||||| |||||||||||  ||||| |||||| ||||||| ||||||||||||||||||| |||||| ||      
T  13837985 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttgatgt 13837886  T
Q  118 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatga 203  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||  ||| |||||||| |||||  |||||  ||||||||||||    
T  13837885 gcttttgggttgagtctaatgtacaaaaattatcgatcgaacccgagcgatcgcccggggtcgccatacggtagaaccgcccatga 13837800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 398772 - 398597
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| |||||| |||| ||||||| ||||||||||   ||||| |||||| | ||||| ||||||||||||||| ||| |||||||||  |||||| ||    
T  398772 tcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttgg 398673  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||   |||||| |||||||||||    
T  398672 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 398597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 33229336 - 33229484
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    |||||||| ||  |||| ||||||||||| |||| ||||||| |||||   ||| |||||||| ||||||| |||||||||||||||| || ||||||||    
T  33229336 gagatgaatccggcaatagtgtgctaaataaaatcccgagacttatttacgtgtaagaattttcagattgcccaaatttttctttttggaaatgtgttaa 33229435  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgg 163  Q
    | | ||||||||||| ||||||||| ||||||| |||||||||||||||    
T  33229436 tggacttttgggttgggtctaatgtacaaaaatgatcgatcgagcccgg 33229484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 97 - 198
Target Start/End: Original strand, 24697899 - 24698000
Alignment:
Q  97 tttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccg 196  Q
    ||||||||||||||||||| ||||||||||||| | |||||||| ||||||||||||| |||||||| |||  | ||||| ||||||| |||||||||||    
T  24697899 tttttgtaagtgtgttaatgggcttttgggttgggcctaatgtgaaaaaattatcgattgagcccgggcgagtgtccggggtcgccgggcggtgaaaccg 24697998  T
Q  197 cc 198  Q
    ||    
T  24697999 cc 24698000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 31028436 - 31028545
Alignment:
Q  87 caaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggac 186  Q
    |||| ||| |||||||||| |||||||||  |||||| |||||  ||||||||||||||||||||||||||| |||| | ||||| |||| ||||||| |    
T  31028436 caaaatttcctttttgtaaatgtgttaatgagcttttaggttggatctaatgtgcaaaaattatcgatcgagtccgggcaaccgctcggggtcgccgggc 31028535  T
Q  187 ggtgaaaccg 196  Q
    ||||||||||    
T  31028536 ggtgaaaccg 31028545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 13647053 - 13647000
Alignment:
Q  146 attatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |||||||||||||||||| |||||||||||| |||||||  |||||||||||||    
T  13647053 attatcgatcgagcccgggcgaccgcccggggtcgccgggtggtgaaaccgccc 13647000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 24695572 - 24695515
Alignment:
Q  97 tttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgat 154  Q
    ||||||||||||||||||| ||||||||||||||| |||||||  |||||| ||||||    
T  24695572 tttttgtaagtgtgttaatgggcttttgggttgagcctaatgttaaaaaatgatcgat 24695515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 34385519 - 34385572
Alignment:
Q  146 attatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||||||||||||||| || | |||||||||| ||||||| ||||||||||||||    
T  34385519 attatcgatcgagccagggcaaccgcccggggtcgccgggcggtgaaaccgccc 34385572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 154
Target Start/End: Complemental strand, 24072625 - 24072576
Alignment:
Q  105 agtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgat 154  Q
    ||||||||||| || |||||||||   |||||||||||||||||||||||    
T  24072625 agtgtgttaatgggtttttgggttcgatctaatgtgcaaaaattatcgat 24072576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 116; Significance: 6e-59; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 15 - 182
Target Start/End: Complemental strand, 5397 - 5230
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||||||| ||||||| |||| |||||||||||||||||||||||    
T  5397 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaa 5298  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgcc 182  Q
    ||||||||| | ||| |||||||||||||||||||| |||||||||||| |||||||||||| |||||    
T  5297 ttggcttttagattgggtctaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgcc 5230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 166
Target Start/End: Complemental strand, 53092 - 52941
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||||||| ||||||  ||||||||||||||||||| ||||||||    
T  53092 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgtccaaatttttctttttgtaaatgtgttaa 52993  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacg 166  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  52992 ttggcttttgggttaaatctaatgtgcaaaaattatcgatcgagcccggacg 52941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 35907719 - 35907532
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||| | |||||  |||||||||| |||||||||||||||||||  |||||||||||| ||||| | |||| ||||||||||||||||||  |||    
T  35907719 gagatgaactcgtcaataatgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattacccaaaattttctttttgtaagtgtactaa 35907620  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||| | ||||||| |||||||||||||||||    
T  35907619 ttggcttttgggttgggtctaatgtgcaaaaattatcgatcaagcccgggcgaccgcccgaggtcgccgggcggtgaaaccgcccatg 35907532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 15 - 199
Target Start/End: Original strand, 321377 - 321561
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| |||||  |||| ||||| ||||||||||||||||||| || |||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  321377 gagatgaacccgtcaataatgtgttaaataaaattccgagacctatttgcatatgagaattttcagattgcccaaatttttctttttgtaactgtgttaa 321476  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    | | |||||||||||  |||||||  ||||||||||||||||||||||||||||||||||  ||||||||  |||||||||||||    
T  321477 tggacttttgggttggatctaatgcacaaaaattatcgatcgagcccggacgaccgcccgaaatcgccgggtggtgaaaccgccc 321561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 18 - 202
Target Start/End: Complemental strand, 7433609 - 7433425
Alignment:
Q  18 atgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattg 117  Q
    |||||||| ||||| ||||||||||| ||||| | |||||||||||  ||||| |||||||||||||| |||| |||||||||||||| ||||||||| |    
T  7433609 atgaacccgtcaatagtgtgctaaataaaatttcaagacctatttgtgtgtgacaatttttagattgcccaaaattttctttttgtaaatgtgttaatgg 7433510  T
Q  118 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||| | |||  |||||  |||||||||||    
T  7433509 gcttttgggttgagtctaatgtgcaaaaattatagatcgagctcgggcgaccgcccggggttgccatacggtagaaccgcccatg 7433425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 17445479 - 17445296
Alignment:
Q  16 agatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaat 115  Q
    |||||||||| |||||  |||||||||| |||||||||||||||||||  |||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  17445479 agatgaacccgtcaataatgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaat 17445380  T
Q  116 tggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    || |||||||||||  |||||||| |||||||||| |||| ||||||| |||||||  ||| ||||||| |  |||||||||||    
T  17445379 tgacttttgggttggatctaatgtacaaaaattattgatccagcccgggcgaccgcatggggtcgccgggcaatgaaaccgccc 17445296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 26144410 - 26144235
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| |||||| |||| ||||||| ||||||||||   ||||| |||||| | ||||| ||||||||||||||| ||| |||||||||  |||||| ||    
T  26144410 tcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttgg 26144311  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||   |||||| |||||||||||    
T  26144310 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 26144235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 3829150 - 3828967
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| ||||||||||| ||||||| |||||||||||  | ||| |||||| ||||||| ||||||||||||||||||||||||||||    
T  3829150 gagatgaacccgtcaatagtgtgctaaataaaattcc-agacctatttgcgtatgaaaattttcagattgcccaaatttttctttttgtaagtgtgttaa 3829052  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |   ||||||||||| || |||||||||||||||||||||||| ||||  |||||| ||||| | |||||  | |||||||||||    
T  3829051 tgaacttttgggttgggtttaatgtgcaaaaattatcgatcgaacccgagcgaccgtccggggttgccgggtgatgaaaccgccc 3828967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 163
Target Start/End: Original strand, 42310941 - 42311089
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||| ||||| | || |||||| ||||| | |||| ||||||  ||||| |||||| ||||||| ||||||||||||||||||| ||||||||    
T  42310941 gagatgaacccgtcaatagcgtactaaataaaatttcaagacttatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 42311040  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgg 163  Q
      |||||||||||||||||||||||||||||||||||||||||||||||    
T  42311041 cgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgg 42311089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 35 - 182
Target Start/End: Original strand, 32982076 - 32982223
Alignment:
Q  35 gtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttgggttgagtct 134  Q
    ||||||||| ||||||| |||||||||||  ||||| |||||| ||||||  ||||||||||||||||||| | ||||||| ||||||| ||||| ||||    
T  32982076 gtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgtccaaatttttctttttgtaaatatgttaatgggcttttaggttgggtct 32982175  T
Q  135 aatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgcc 182  Q
    |||||||||||||||||||||| |||||  |||||||||||| |||||    
T  32982176 aatgtgcaaaaattatcgatcgggcccgcgcgaccgcccggggtcgcc 32982223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 56 - 199
Target Start/End: Original strand, 41972314 - 41972458
Alignment:
Q  56 cctatttgaatgtgagaatttttagattgct--caaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcga 153  Q
    ||||||||  |||||||||||| |||||  |  ||||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||||||    
T  41972314 cctatttgcgtgtgagaattttcagattttttccaaatttttctttttgtaagtgtgttaataggcttttaggttggatctaatgtgcaaaaattatcga 41972413  T
Q  154 tcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||||||| || |||||||||||| |||| |||||||| ||||||||    
T  41972414 tcgagccagg-cgaccgcccggggtcgctggacggtggaaccgccc 41972458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 56 - 199
Target Start/End: Complemental strand, 33489815 - 33489670
Alignment:
Q  56 cctatttgaatgtgagaatttttagatt--gctcaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcga 153  Q
    ||||||||  |||||||||||| |||||  ||||||||||||||||| |||||||||||||| ||||||| | ||||||||||||| |||||||||||||    
T  33489815 cctatttgcgtgtgagaattttcagattttgctcaaatttttcttttagtaagtgtgttaatgggcttttagtttgagtctaatgtacaaaaattatcga 33489716  T
Q  154 tcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
     | | |||| ||||||| ||||| |||||||  |||||||||||||    
T  33489715 acaatcccgaacgaccgtccggggtcgccgggtggtgaaaccgccc 33489670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 202
Target Start/End: Complemental strand, 23313342 - 23313218
Alignment:
Q  79 agattgctcaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaa-aaattatcgatcgagcccggacgaccgcccggga 177  Q
    ||||||| ||||||||||||||||||| |||||||||   |||||  |||||||||||||||||| |||| ||| ||||||||||| | |||||||| ||    
T  23313342 agattgcccaaatttttctttttgtaaatgtgttaatgaacttttatgttgagtctaatgtgcaacaaatcatcaatcgagcccgggcaaccgcccgaga 23313243  T
Q  178 tcgccggacggtgaaaccgcccatg 202  Q
    |||||  |||||  |||||||||||    
T  23313242 tcgccatacggtagaaccgcccatg 23313218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 35951427 - 35951497
Alignment:
Q  97 tttttgtaagtgtgttaattggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacga 167  Q
    ||||||| ||||||||||| |||| |||||||    ||||||| |||||||||||||||||||||||||||    
T  35951427 tttttgttagtgtgttaatgggctattgggttcgacctaatgtacaaaaattatcgatcgagcccggacga 35951497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 199
Target Start/End: Original strand, 44352614 - 44352667
Alignment:
Q  146 attatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |||||||||||||||||| ||||| |||||| |||||||| |||||||||||||    
T  44352614 attatcgatcgagcccgggcgacctcccggggtcgccggatggtgaaaccgccc 44352667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 31867014 - 31866960
Alignment:
Q  145 aattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |||||||| |||| ||||| |||||||||||| ||||||| ||||||||||||||    
T  31867014 aattatcggtcgaacccgggcgaccgcccggggtcgccgggcggtgaaaccgccc 31866960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 199
Target Start/End: Original strand, 48901207 - 48901288
Alignment:
Q  117 ggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    ||||||||||||| | |||||||||| |||||||||||||| ||||| | |||||||||  | ||||| ||||| ||||||||    
T  48901207 ggcttttgggttgggcctaatgtgcataaattatcgatcgaccccgg-ccaccgcccggagttgccgggcggtggaaccgccc 48901288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 104; Significance: 8e-52; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 17997 - 17822
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| ||||||||||| ||||| | ||||||||||  |||||| |||||| ||||||| ||||||||||||||||||| ||||||||| ||||||||||    
T  17997 tcaatagtgtgctaaataaaatttcaagacctatttacatgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttggg 17898  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||  |||||  |||||||||||    
T  17897 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgatcgctcggggtcgccacacggtagaaccgcccatg 17822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 15 - 199
Target Start/End: Complemental strand, 31647 - 31463
Alignment:
Q  15 gagatgaacccatcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaa 114  Q
    ||||||||||  ||||| |||||| |||| ||||| | |||||||||||   ||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  31647 gagatgaacctgtcaatagtgtgcaaaataaaattactagacctatttgcgagtgagaattttcagattgtccaaatttttctttttgtaagtgtgttaa 31548  T
Q  115 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    | ||||||||||||| ||||| ||||||||||||||||||||||||||| |||||| | ||| ||||||| || |||||||||||    
T  31547 tgggcttttgggttgggtctagtgtgcaaaaattatcgatcgagcccgggcgaccgtctggggtcgccgggcgatgaaaccgccc 31463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2142 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 677 - 502
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| |||||| |||| ||||||| ||||||||||   ||||| |||||| | ||||| ||||||||||||||| ||| |||||||||  |||||| ||    
T  677 tcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttgg 578  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||   |||||| |||||||||||    
T  577 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgggatcgctacacggtggaaccgcccatg 502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 480469 - 480644
Alignment:
Q  27 tcaattgtgtgctaaattaaattccgagacctatttgaatgtgagaatttttagattgctcaaatttttctttttgtaagtgtgttaattggcttttggg 126  Q
    ||||| |||||| |||| ||||||| ||||||||||   ||||| |||||| | ||||| ||||||||||||||| ||| |||||||||  |||||| ||    
T  480469 tcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttgg 480568  T
Q  127 ttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgcccatg 202  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||   |||||| |||||||||||    
T  480569 ttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 480644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 152 - 199
Target Start/End: Complemental strand, 1307 - 1260
Alignment:
Q  152 gatcgagcccggacgaccgcccgggatcgccggacggtgaaaccgccc 199  Q
    |||||||||||| |||||||||||| ||||||| |||| |||||||||    
T  1307 gatcgagcccgggcgaccgcccggggtcgccgggcggtaaaaccgccc 1260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University