View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20634_high_15 (Length: 410)

Name: NF20634_high_15
Description: NF20634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20634_high_15
NF20634_high_15
[»] chr3 (33 HSPs)
chr3 (20-393)||(35093321-35093694)
chr3 (282-387)||(49607412-49607517)
chr3 (284-387)||(26141529-26141632)
chr3 (288-387)||(52629304-52629403)
chr3 (282-387)||(33118848-33118953)
chr3 (284-387)||(53982011-53982114)
chr3 (283-387)||(17470404-17470508)
chr3 (282-349)||(11347957-11348024)
chr3 (284-387)||(33644200-33644303)
chr3 (284-393)||(14623830-14623939)
chr3 (282-387)||(41189761-41189866)
chr3 (282-387)||(54868892-54868997)
chr3 (279-387)||(27714888-27714996)
chr3 (282-349)||(11095388-11095455)
chr3 (284-387)||(51419357-51419460)
chr3 (289-393)||(13898046-13898150)
chr3 (287-387)||(26754698-26754798)
chr3 (284-387)||(8076393-8076496)
chr3 (284-387)||(20764912-20765015)
chr3 (282-349)||(36707459-36707526)
chr3 (282-387)||(11907369-11907474)
chr3 (289-387)||(30801730-30801828)
chr3 (289-387)||(31456694-31456792)
chr3 (283-393)||(35536625-35536735)
chr3 (289-387)||(48587088-48587186)
chr3 (283-387)||(24699951-24700055)
chr3 (282-394)||(1758446-1758560)
chr3 (284-387)||(47531865-47531968)
chr3 (283-386)||(9562998-9563101)
chr3 (282-349)||(35965809-35965876)
chr3 (283-349)||(8956761-8956827)
chr3 (324-394)||(41080748-41080817)
chr3 (284-350)||(45058587-45058652)
[»] chr5 (25 HSPs)
chr5 (284-387)||(35943889-35943992)
chr5 (283-387)||(2740273-2740377)
chr5 (282-387)||(13811650-13811755)
chr5 (284-387)||(28177775-28177878)
chr5 (280-387)||(36732939-36733046)
chr5 (289-387)||(18520881-18520979)
chr5 (282-349)||(15409645-15409712)
chr5 (284-387)||(33149635-33149738)
chr5 (284-387)||(35785199-35785302)
chr5 (282-384)||(31008986-31009088)
chr5 (283-387)||(6679697-6679801)
chr5 (284-384)||(14831814-14831914)
chr5 (284-387)||(26720516-26720619)
chr5 (284-387)||(26990265-26990368)
chr5 (284-387)||(40145407-40145510)
chr5 (282-387)||(3921262-3921367)
chr5 (283-387)||(2252165-2252269)
chr5 (284-394)||(6259991-6260101)
chr5 (282-387)||(39688894-39688999)
chr5 (284-387)||(42414299-42414402)
chr5 (289-343)||(36875644-36875698)
chr5 (282-387)||(9603811-9603916)
chr5 (282-394)||(38296201-38296313)
chr5 (289-387)||(16327906-16328004)
chr5 (288-347)||(10356638-10356698)
[»] chr4 (33 HSPs)
chr4 (282-387)||(480444-480549)
chr4 (282-387)||(23608233-23608338)
chr4 (284-387)||(6034044-6034147)
chr4 (282-387)||(29239884-29239989)
chr4 (282-387)||(50052425-50052530)
chr4 (284-387)||(54473530-54473633)
chr4 (282-387)||(48183046-48183151)
chr4 (284-387)||(3481654-3481757)
chr4 (284-387)||(11511459-11511562)
chr4 (284-387)||(31910192-31910295)
chr4 (284-387)||(41236347-41236450)
chr4 (277-387)||(42044364-42044474)
chr4 (284-384)||(50526171-50526271)
chr4 (282-350)||(55475189-55475257)
chr4 (283-394)||(28480258-28480369)
chr4 (283-394)||(28481133-28481244)
chr4 (283-394)||(28482008-28482119)
chr4 (284-349)||(40574779-40574844)
chr4 (284-396)||(29535377-29535488)
chr4 (282-350)||(29547993-29548061)
chr4 (283-387)||(50813889-50813993)
chr4 (328-394)||(18769037-18769103)
chr4 (277-387)||(47986201-47986311)
chr4 (282-387)||(19670713-19670818)
chr4 (283-387)||(29234242-29234346)
chr4 (282-393)||(29977883-29977994)
chr4 (316-387)||(56300162-56300233)
chr4 (284-350)||(8343197-8343263)
chr4 (281-387)||(24995104-24995210)
chr4 (284-350)||(55079748-55079814)
chr4 (281-350)||(32766955-32767024)
chr4 (304-387)||(17983740-17983823)
chr4 (282-387)||(48647723-48647828)
[»] chr7 (36 HSPs)
chr7 (282-387)||(19436184-19436289)
chr7 (282-394)||(18207178-18207289)
chr7 (283-387)||(36361910-36362014)
chr7 (289-387)||(3784000-3784098)
chr7 (283-387)||(3434561-3434665)
chr7 (283-387)||(36362025-36362129)
chr7 (284-387)||(38267040-38267143)
chr7 (282-387)||(7389387-7389492)
chr7 (282-387)||(40957705-40957810)
chr7 (284-387)||(19329842-19329945)
chr7 (289-387)||(3694372-3694470)
chr7 (285-387)||(35522877-35522979)
chr7 (284-394)||(39255914-39256023)
chr7 (282-387)||(8080380-8080485)
chr7 (284-387)||(35137533-35137636)
chr7 (284-349)||(21234401-21234466)
chr7 (282-387)||(36208171-36208276)
chr7 (282-387)||(38837215-38837320)
chr7 (284-387)||(4999511-4999614)
chr7 (325-396)||(16374812-16374883)
chr7 (283-350)||(22343360-22343427)
chr7 (275-345)||(35468894-35468964)
chr7 (284-394)||(41423682-41423792)
chr7 (281-350)||(38044194-38044263)
chr7 (284-349)||(46374837-46374902)
chr7 (284-387)||(8238212-8238316)
chr7 (283-387)||(41915740-41915844)
chr7 (300-394)||(2318233-2318327)
chr7 (284-350)||(32564460-32564526)
chr7 (289-387)||(32951490-32951588)
chr7 (278-363)||(46033822-46033907)
chr7 (282-349)||(10343598-10343665)
chr7 (283-347)||(26296643-26296707)
chr7 (324-386)||(27744307-27744369)
chr7 (284-350)||(40846147-40846213)
chr7 (284-340)||(31735884-31735940)
[»] chr2 (32 HSPs)
chr2 (282-387)||(10249379-10249484)
chr2 (283-402)||(7465717-7465836)
chr2 (284-387)||(13438343-13438446)
chr2 (283-384)||(32505648-32505749)
chr2 (279-387)||(30915458-30915566)
chr2 (284-387)||(17473020-17473123)
chr2 (284-387)||(40613899-40614002)
chr2 (284-394)||(17819994-17820104)
chr2 (289-387)||(28863460-28863558)
chr2 (282-387)||(9058478-9058583)
chr2 (282-387)||(33436097-33436202)
chr2 (282-387)||(42257191-42257296)
chr2 (283-387)||(5574485-5574589)
chr2 (282-387)||(26891501-26891606)
chr2 (284-384)||(4060685-4060785)
chr2 (284-387)||(38732354-38732457)
chr2 (284-387)||(40701478-40701581)
chr2 (284-350)||(43490121-43490187)
chr2 (284-387)||(28381652-28381755)
chr2 (289-387)||(19930817-19930915)
chr2 (282-387)||(20700813-20700918)
chr2 (282-387)||(45097732-45097837)
chr2 (283-387)||(36168835-36168939)
chr2 (284-387)||(27864704-27864807)
chr2 (282-349)||(38273177-38273244)
chr2 (283-349)||(2533123-2533188)
chr2 (283-349)||(33436210-33436276)
chr2 (289-394)||(41575142-41575248)
chr2 (304-387)||(2997484-2997567)
chr2 (282-349)||(38882849-38882915)
chr2 (327-384)||(3737986-3738043)
chr2 (282-394)||(15428730-15428842)
[»] chr8 (31 HSPs)
chr8 (284-387)||(12831047-12831150)
chr8 (282-387)||(14547920-14548025)
chr8 (282-387)||(10284628-10284733)
chr8 (283-384)||(37038478-37038579)
chr8 (284-387)||(504118-504221)
chr8 (284-387)||(15197333-15197436)
chr8 (284-387)||(34012293-34012396)
chr8 (280-387)||(34307212-34307319)
chr8 (284-387)||(43414578-43414681)
chr8 (289-387)||(5957835-5957933)
chr8 (283-393)||(17443824-17443934)
chr8 (284-387)||(1179937-1180040)
chr8 (284-387)||(23122594-23122697)
chr8 (286-387)||(10621084-10621185)
chr8 (282-387)||(16056398-16056503)
chr8 (282-387)||(16383375-16383480)
chr8 (281-394)||(42221512-42221625)
chr8 (283-387)||(44507084-44507188)
chr8 (328-387)||(9122229-9122288)
chr8 (284-387)||(15048179-15048281)
chr8 (284-387)||(40423940-40424043)
chr8 (277-347)||(24307622-24307692)
chr8 (282-347)||(24307830-24307895)
chr8 (326-387)||(38229470-38229531)
chr8 (304-387)||(8841429-8841512)
chr8 (284-350)||(30479508-30479574)
chr8 (273-387)||(32032714-32032827)
chr8 (282-387)||(4854860-4854965)
chr8 (284-361)||(14055615-14055692)
chr8 (282-387)||(15258926-15259031)
chr8 (284-349)||(20074969-20075034)
[»] chr1 (29 HSPs)
chr1 (282-349)||(49811562-49811629)
chr1 (282-387)||(32813245-32813350)
chr1 (284-387)||(3000319-3000422)
chr1 (282-384)||(2581913-2582015)
chr1 (282-387)||(38595152-38595257)
chr1 (283-384)||(51898683-51898784)
chr1 (284-387)||(9474873-9474976)
chr1 (284-387)||(26440734-26440837)
chr1 (284-387)||(27564732-27564835)
chr1 (284-383)||(37649198-37649297)
chr1 (284-387)||(47452317-47452420)
chr1 (284-387)||(48716279-48716382)
chr1 (285-387)||(44453980-44454082)
chr1 (289-387)||(44548373-44548471)
chr1 (282-387)||(8346385-8346490)
chr1 (279-387)||(38632318-38632426)
chr1 (284-387)||(43132-43235)
chr1 (282-387)||(5958997-5959102)
chr1 (283-387)||(37926435-37926539)
chr1 (283-387)||(50630457-50630561)
chr1 (284-387)||(41608490-41608593)
chr1 (284-387)||(50590997-50591100)
chr1 (310-387)||(13414787-13414864)
chr1 (282-350)||(45044594-45044662)
chr1 (289-387)||(26274437-26274535)
chr1 (327-384)||(48489343-48489400)
chr1 (283-349)||(7740732-7740798)
chr1 (284-361)||(6260870-6260947)
chr1 (283-387)||(41758804-41758908)
[»] chr6 (18 HSPs)
chr6 (283-387)||(31976247-31976351)
chr6 (284-387)||(17598554-17598657)
chr6 (289-387)||(23128124-23128222)
chr6 (291-387)||(32869685-32869781)
chr6 (283-387)||(11427615-11427721)
chr6 (289-387)||(22880655-22880753)
chr6 (284-393)||(31953021-31953130)
chr6 (289-387)||(28536485-28536581)
chr6 (282-387)||(6209462-6209567)
chr6 (282-387)||(15990039-15990144)
chr6 (282-387)||(30341357-30341462)
chr6 (291-387)||(946383-946479)
chr6 (282-366)||(15832575-15832659)
chr6 (284-387)||(15508021-15508124)
chr6 (284-387)||(29857827-29857930)
chr6 (296-349)||(31109435-31109488)
chr6 (282-394)||(12732480-12732592)
chr6 (282-349)||(31110796-31110861)
[»] scaffold0321 (1 HSPs)
scaffold0321 (282-387)||(10106-10211)
[»] scaffold1268 (1 HSPs)
scaffold1268 (284-387)||(926-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (284-387)||(926-1029)
[»] scaffold0110 (1 HSPs)
scaffold0110 (284-387)||(8860-8963)
[»] scaffold0237 (1 HSPs)
scaffold0237 (284-387)||(4029-4132)
[»] scaffold0018 (1 HSPs)
scaffold0018 (304-387)||(152518-152601)
[»] scaffold0316 (1 HSPs)
scaffold0316 (327-387)||(17097-17157)


Alignment Details
Target: chr3 (Bit Score: 322; Significance: 0; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 20 - 393
Target Start/End: Original strand, 35093321 - 35093694
Alignment:
Q  20 ggtactattgcataacgtggcttcccttagctagacaaatgttccaaacgtagactgatggaatgtttttggcacaatatgcatattaaatctttgttgt 119  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35093321 ggtactattgcataacgtggcttcccttagctagacaaatgtcccaaacgtagactgatggaatgtttttggcacaatatgcatattaaatctttgttgt 35093420  T
Q  120 acctctcatcatcctattgaacttagataacatagtggacatgaaaagggactgattttgatgttcgtttacctcataagagatgcatgaacagaatttt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35093421 acctctcatcatcctattgaacttagataacatagtggacatgaaaagggactgattttgatgttcgtttacctcataagagatccatgaacagaatttt 35093520  T
Q  220 attaaataatattcactcctcatatattaaccgtcactgtaggtcctttcacataaataaagaagagttatgatagatagacaaccttaggtgacaatac 319  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||    
T  35093521 attaaataatattcactcctcatatattaactgtcactctaggtcctttcacataaataaagaagagttacgatacatagacaactttaggtgacaatac 35093620  T
Q  320 aacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctcttgcatct 393  Q
    ||||||||||| |||| |||||||||||||| |||||| |||||  ||||||||||||||||||||||||||||    
T  35093621 aacatttgacatccacgcaaaaatctgacatgtggtcatgtgaactccatacaagcacactttctcttgcatct 35093694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 49607412 - 49607517
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  | |||||||| |||||| ||||||||||||    
T  49607412 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactt 49607511  T
Q  382 tctctt 387  Q
    ||||||    
T  49607512 tctctt 49607517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 26141632 - 26141529
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    ||||||||||| ||||||| ||||||||| ||||||| | ||| ||||||||||||||||||||||  ||||||| || | |||| ||||||||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttc 26141533  T
Q  384 tctt 387  Q
    ||||    
T  26141532 tctt 26141529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 288 - 387
Target Start/End: Original strand, 52629304 - 52629403
Alignment:
Q  288 tatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    ||||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  | |||||||| | ||| |||||||||||||||||||    
T  52629304 tatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctctt 52629403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 33118953 - 33118848
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| ||||||| ||||||||||||||||| | |||||||||||||||||||| |||||  | |||||||| |||||  | || |||||||    
T  33118953 aagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactt 33118854  T
Q  382 tctctt 387  Q
    ||||||    
T  33118853 tctctt 33118848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 53982011 - 53982114
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  | |||||||| | |||  ||||||||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 53982110  T
Q  384 tctt 387  Q
    ||||    
T  53982111 tctt 53982114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 17470404 - 17470508
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    ||||| |||||| ||||||| | ||||||| ||||||| | ||| ||||||||||||||||||||||  | |||||||| | |||| |||||||||||||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 17470503  T
Q  383 ctctt 387  Q
    |||||    
T  17470504 ctctt 17470508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 11348024 - 11347957
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgaca 349  Q
    ||||||||||||| ||||||| ||||||||||||||||| | ||||||| ||||||||||||||||||    
T  11348024 aagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgaca 11347957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 33644200 - 33644303
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| |||| |||| ||||||| | ||||||||||||||||||||||||||  | |||||||| | |||  ||||||||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 33644299  T
Q  384 tctt 387  Q
    ||||    
T  33644300 tctt 33644303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 284 - 393
Target Start/End: Complemental strand, 14623939 - 14623830
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||||||| ||||||| |  |||||||||||| ||||||||||||| || ||| ||| | | || ||||||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  384 tcttgcatct 393  Q
    |||| |||||    
T  14623839 tctttcatct 14623830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 41189866 - 41189761
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| ||| ||| ||||||||| ||||||| ||||||||||||||| |||||| |||||  ||| ||| || | |||  ||||||||||||    
T  41189866 aagagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactt 41189767  T
Q  382 tctctt 387  Q
    ||||||    
T  41189766 tctctt 41189761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 54868997 - 54868892
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  | || ||||| | |||  |||| |||||||    
T  54868997 aagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactt 54868898  T
Q  382 tctctt 387  Q
    ||||||    
T  54868897 tctctt 54868892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 387
Target Start/End: Complemental strand, 27714996 - 27714888
Alignment:
Q  279 aagaagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcaca 378  Q
    ||||||||| |||||| ||||||| | |||||||  |||||| | ||||||||||||||||||||||||||  | |||| ||| | |||  |||||||||    
T  27714996 aagaagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 27714897  T
Q  379 ctttctctt 387  Q
    |||||||||    
T  27714896 ctttctctt 27714888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 11095455 - 11095388
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgaca 349  Q
    |||||| |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||    
T  11095455 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 11095388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 51419460 - 51419357
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    ||||||||||| ||||||| |||||| |||||||||| | ||| ||||||||||||||||||||||  ||| ||| |  | |||  ||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  384 tctt 387  Q
    ||||    
T  51419360 tctt 51419357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 289 - 393
Target Start/End: Complemental strand, 13898150 - 13898046
Alignment:
Q  289 atgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctcttg 388  Q
    |||||||||| ||| ||||||||| ||||||| |  |||||||||||| ||||||||||||  || ||| ||| | | || ||||||||||||||||||     
T  13898150 atgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttctcttt 13898051  T
Q  389 catct 393  Q
    |||||    
T  13898050 catct 13898046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 287 - 387
Target Start/End: Original strand, 26754698 - 26754798
Alignment:
Q  287 ttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctct 386  Q
    |||||||  ||||||| ||||||||| ||||||| | || |||| ||||||||||||||||||| ||||||| || | |||  ||||||||| |||||||    
T  26754698 ttatgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 26754797  T
Q  387 t 387  Q
    |    
T  26754798 t 26754798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 8076393 - 8076496
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||| ||| ||||||||| || |||| | |||||||||||||||||||||| |||  | |||||||| | |||  ||||||||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  384 tctt 387  Q
    ||||    
T  8076493 tctt 8076496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 20765015 - 20764912
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    ||||||||| | ||||||| |||||||||  ||||||   ||| ||||||||||||||||||||||  ||| ||| || | ||| |||||||||||||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttc 20764916  T
Q  384 tctt 387  Q
    ||||    
T  20764915 tctt 20764912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 36707526 - 36707459
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgaca 349  Q
    |||||| |||||| ||||| | ||||||||||||||||| | ||||||| ||||||||||||||||||    
T  36707526 aagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgaca 36707459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 11907369 - 11907474
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttg-acacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacact 380  Q
    ||||||||||||| ||||||| |||||||||||||||| |||  || |||| |||||||||||||||||| ||||||  || | |||  ||||||||| |    
T  11907369 aagagttatgatacatagacacccttaggtgacaatac-acacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacatt 11907467  T
Q  381 ttctctt 387  Q
    |||||||    
T  11907468 ttctctt 11907474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 387
Target Start/End: Complemental strand, 30801828 - 30801730
Alignment:
Q  289 atgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    |||||| ||||||| |||||||||| |||||| | ||||| |||||||||||||| |||||| | ||||  || | |||| ||||||||| ||||||||    
T  30801828 atgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctctt 30801730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 387
Target Start/End: Original strand, 31456694 - 31456792
Alignment:
Q  289 atgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    |||||| ||||||| || |||| | ||||||| | ||||||||||||||||||||||||||  | |||| ||| | |||  ||||||||||||||||||    
T  31456694 atgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctctt 31456792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 35536625 - 35536735
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    ||||| |||||| ||||||| ||||| ||| ||||||| ||||||||||||||| |||||| |||||  |||||| ||| | |  | ||||||||||||     
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttc 35536724  T
Q  383 ctcttgcatct 393  Q
    ||||| |||||    
T  35536725 ctctttcatct 35536735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 387
Target Start/End: Complemental strand, 48587186 - 48587088
Alignment:
Q  289 atgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    |||||| ||||| | ||||||||| ||||||| | ||||||||| ||| ||||||||||||  | |||||||| |||||  ||||| ||||||||||||    
T  48587186 atgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctctt 48587088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 24700055 - 24699951
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    ||||| |||||| ||||||| |||||| || ||||||| | ||||||||||||| ||||||||| ||  ||| |||||| | ||  ||||| ||||||||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacacttt 24699956  T
Q  383 ctctt 387  Q
    |||||    
T  24699955 ctctt 24699951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 394
Target Start/End: Complemental strand, 1758560 - 1758446
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacat--ttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacac 379  Q
    ||||||||||||| |||| ||||| |||||  ||||||| |    |||||||||||||||||||||||||| |||| ||||| |  ||| |||| ||||     
T  1758560 aagagttatgatacatagtcaaccataggttgcaatacaccccccttgacacccacacaaaaatctgacatatggttacgtggactccacacaaacacat 1758461  T
Q  380 tttctcttgcatctc 394  Q
    |||||||| ||||||    
T  1758460 tttctctttcatctc 1758446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 47531865 - 47531968
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    ||||||||||| ||||||| |||||| || ||||||| | ||| ||| |||||||| |||||||||  ||| ||  |||| |||  ||||||||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  384 tctt 387  Q
    ||||    
T  47531965 tctt 47531968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 283 - 386
Target Start/End: Original strand, 9562998 - 9563101
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    ||||| |||||| ||| ||| | |||| |||||||||||| ||||||| ||| | ||||||||||||  | |||||||| ||||   |||| ||||||||    
T  9562998 agagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacacttt 9563097  T
Q  383 ctct 386  Q
    ||||    
T  9563098 ctct 9563101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 35965876 - 35965809
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgaca 349  Q
    |||||| |||||| ||| ||| ||||| |||| |||||| | ||||||||||||| ||||||||||||    
T  35965876 aagagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgaca 35965809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 349
Target Start/End: Original strand, 8956761 - 8956827
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgaca 349  Q
    ||||| |||||| ||||||| ||||| ||| ||||||| | ||||||||||||| |||||| |||||    
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgaca 8956827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 394
Target Start/End: Original strand, 41080748 - 41080817
Alignment:
Q  324 tttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctcttgcatctc 394  Q
    |||||||||||| ||||||||||| || |||||| ||| | |||| ||||||||| |||||||| ||||||    
T  41080748 tttgacacccacgcaaaaatctgatatgtggtcatgtgga-cccacacaagcacattttctctttcatctc 41080817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 350
Target Start/End: Complemental strand, 45058652 - 45058587
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacat 350  Q
    ||||||||||| ||| ||| ||||||||| ||||||| | || |||||||||| |||||||||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacaccctt-gacacccacataaaaatctgacat 45058587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 7e-28; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 35943992 - 35943889
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    ||||||||||| ||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||  | || ||||| |||||| ||||||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  384 tctt 387  Q
    ||||    
T  35943892 tctt 35943889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 2740273 - 2740377
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    ||||| |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  | |||||||| |||||  |||||||||||||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 2740372  T
Q  383 ctctt 387  Q
    |||||    
T  2740373 ctctt 2740377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 13811650 - 13811755
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| | |||| ||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||  | |||||||| | |||  ||||||||||||    
T  13811650 aagagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 13811749  T
Q  382 tctctt 387  Q
    ||||||    
T  13811750 tctctt 13811755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 28177775 - 28177878
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    ||||||||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  ||||||| || | |||  |||| |||||||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttc 28177874  T
Q  384 tctt 387  Q
    ||||    
T  28177875 tctt 28177878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 280 - 387
Target Start/End: Complemental strand, 36733046 - 36732939
Alignment:
Q  280 agaagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacac 379  Q
    |||||||| |||||| ||||||| ||||||||  ||||||| | ||||||||||||||||||||||||||  | |||||||| | |||  ||||||||||    
T  36733046 agaagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacac 36732947  T
Q  380 tttctctt 387  Q
    ||||||||    
T  36732946 tttctctt 36732939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 289 - 387
Target Start/End: Complemental strand, 18520979 - 18520881
Alignment:
Q  289 atgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  | |||||||| | |||  ||||||||||||||||||    
T  18520979 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctt 18520881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 15409712 - 15409645
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgaca 349  Q
    ||||||||||||| ||||||| |||||||||||||||||   ||||||||||||||||||||||||||    
T  15409712 aagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgaca 15409645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 33149738 - 33149635
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| |||||||||  |||||| | |||||||||||||||||||| |||||  | |||||||| |||||  ||||||||||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 33149639  T
Q  384 tctt 387  Q
    ||||    
T  33149638 tctt 33149635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 35785199 - 35785302
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  | || ||||| |||||  |||| |||||||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttc 35785298  T
Q  384 tctt 387  Q
    ||||    
T  35785299 tctt 35785302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 282 - 384
Target Start/End: Original strand, 31008986 - 31009088
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| ||| ||| |||||||||||||||||   ||  ||||||||||||||||||||||  | |||||||| |||||  ||||||||||||    
T  31008986 aagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactt 31009085  T
Q  382 tct 384  Q
    |||    
T  31009086 tct 31009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 6679697 - 6679801
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    |||||||||||| ||||||| | ||||||| ||||||| | ||||||||||||||||||||||||||  ||||||| || | |||  |||| |||| |||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacatttt 6679796  T
Q  383 ctctt 387  Q
    |||||    
T  6679797 ctctt 6679801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 384
Target Start/End: Original strand, 14831814 - 14831914
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| |||||||  |||||||| ||||||| | ||||||||||||| ||||||||||||  | |||||||| |||||  ||||||||||||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 14831913  T
Q  384 t 384  Q
    |    
T  14831914 t 14831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 26720516 - 26720619
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    ||||||||||| ||||||| ||||||||| ||||||| | ||| ||||| ||| ||||||||||||  ||| ||| || |||||  ||||||||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26720615  T
Q  384 tctt 387  Q
    ||||    
T  26720616 tctt 26720619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 26990265 - 26990368
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    ||||||||||| ||||||| ||||||||| ||||||| | ||| ||||| ||| ||||||||||||  ||| ||| || |||||  ||||||||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26990364  T
Q  384 tctt 387  Q
    ||||    
T  26990365 tctt 26990368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 40145407 - 40145510
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||||||| ||||||| | ||| ||| ||||||||||||||||||  | |||||||| | |||  ||||||||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 40145506  T
Q  384 tctt 387  Q
    ||||    
T  40145507 tctt 40145510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 3921367 - 3921262
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| ||| ||| ||||||||| ||||||| |  |||||||||||||||||||||||||| ||| ||  || | |||  ||||| ||||||    
T  3921367 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 3921268  T
Q  382 tctctt 387  Q
    ||||||    
T  3921267 tctctt 3921262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 2252269 - 2252165
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    |||||||||||| ||| ||| ||||||||| ||||||| |  |||||||||||||||||||||||||| ||| ||  || | |||  ||||| |||||||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 2252170  T
Q  383 ctctt 387  Q
    |||||    
T  2252169 ctctt 2252165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 284 - 394
Target Start/End: Complemental strand, 6260101 - 6259991
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||| |||||| |||||||||||||| | ||| |||||||| ||||||||| |||  ||||||| || | | || | ||||||||||||    
T  6260101 gagtaatgatacatacacaaccataggtgacaatacaccctttaacacccacgcaaaaatctaacacatggtcacatggacctcacagaagcacactttc 6260002  T
Q  384 tcttgcatctc 394  Q
    |||| ||||||    
T  6260001 tctttcatctc 6259991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 39688999 - 39688894
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| ||| ||| ||||| ||| ||||||| |  ||||||||||||||||||||||| || ||||||  |||| |||  | ||| ||||||    
T  39688999 aagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactt 39688900  T
Q  382 tctctt 387  Q
    ||||||    
T  39688899 tctctt 39688894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 42414402 - 42414299
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| |  |||||| ||||||| | ||||||||||||||||||||||||||  | |||| ||| | |||  |||||||||||||     
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttta 42414303  T
Q  384 tctt 387  Q
    ||||    
T  42414302 tctt 42414299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 343
Target Start/End: Complemental strand, 36875698 - 36875644
Alignment:
Q  289 atgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaat 343  Q
    |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||    
T  36875698 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 9603811 - 9603916
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| ||| ||| |||||||||| ||||||    || ||||| ||||||||||||||||  ||||||  || | ||||||||| |||||||    
T  9603811 aagagtaatgatacatatacatccttaggtgataatacactcattcacacctacacaaaaatctgacacatggtcatatggaccccatacaatcacactt 9603910  T
Q  382 tctctt 387  Q
    ||||||    
T  9603911 tctctt 9603916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 394
Target Start/End: Original strand, 38296201 - 38296313
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| |||||| | |||||||| ||||||| |  || | ||||||||||||||| ||||  | |  ||||| |||| | ||||||||||||    
T  38296201 aagagttatgatacatagactatcttaggtgtcaatacacctcttaatacccacacaaaaatcagacacgtagctacgtggatccaacacaagcacactt 38296300  T
Q  382 tctcttgcatctc 394  Q
    |||| | ||||||    
T  38296301 tctcattcatctc 38296313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 387
Target Start/End: Original strand, 16327906 - 16328004
Alignment:
Q  289 atgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    |||||||||| | | ||||||||| ||||||| |  |||||||||||| ||||||||||||  || ||| ||| | | || ||||||||||||| ||||    
T  16327906 atgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcacactttttctt 16328004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 288 - 347
Target Start/End: Original strand, 10356638 - 10356698
Alignment:
Q  288 tatgatagatagacaaccttaggtgacaatacaacat-ttgacacccacacaaaaatctga 347  Q
    ||||||| ||||||| ||||||||| ||||||| |   |||||||||||||||||||||||    
T  10356638 tatgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 1e-26; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 480549 - 480444
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||||||  | |||||||| | ||| |||||||||||||    
T  480549 aagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 480450  T
Q  382 tctctt 387  Q
    ||||||    
T  480449 tctctt 480444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 23608233 - 23608338
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| ||||||| |||||| |||||||||| ||||||||||||||||||||||||||||  | ||||||||||  ||| ||||||||||||    
T  23608233 aagagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactt 23608332  T
Q  382 tctctt 387  Q
    ||||||    
T  23608333 tctctt 23608338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 6034044 - 6034147
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||| | |||||||| |||||  ||||||||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttc 6034143  T
Q  384 tctt 387  Q
    ||||    
T  6034144 tctt 6034147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 29239884 - 29239989
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| ||||||| ||||||||| ||||||| ||||||||| |||||||||||||| |||  | |||||||| | |||| ||||||||||||    
T  29239884 aagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactt 29239983  T
Q  382 tctctt 387  Q
    ||||||    
T  29239984 tctctt 29239989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 50052530 - 50052425
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  | |||||||| | |||  ||||||||||||    
T  50052530 aagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 50052431  T
Q  382 tctctt 387  Q
    ||||||    
T  50052430 tctctt 50052425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 54473633 - 54473530
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||| |||  | |||||||| | |||  |||||||||||||     
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttta 54473534  T
Q  384 tctt 387  Q
    ||||    
T  54473533 tctt 54473530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 48183151 - 48183046
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| ||||||| ||||| ||| ||||||| | ||||||||||||||||||||||||||  | |||||||| | |||  ||||||||||||    
T  48183151 aagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 48183052  T
Q  382 tctctt 387  Q
    ||||||    
T  48183051 tctctt 48183046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 3481654 - 3481757
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| | ||||||| |||||||   ||||||||||||||||||||||||||  | |||||||| | |||| ||||||||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttc 3481753  T
Q  384 tctt 387  Q
    ||||    
T  3481754 tctt 3481757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 11511562 - 11511459
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||||||| ||||||| | ||||||||||||| ||||||||||||  | |||||||| | |||  ||||||||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 11511463  T
Q  384 tctt 387  Q
    ||||    
T  11511462 tctt 11511459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 31910192 - 31910295
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    ||||||||||| ||||||| |||||||||||||||||   ||||||||||||||||||||||||||  | | ||| || | |||  ||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttc 31910291  T
Q  384 tctt 387  Q
    ||||    
T  31910292 tctt 31910295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 41236347 - 41236450
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||||||| ||||||| | ||||||| ||||||||||||||||||  | |||||||| | |||  ||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  384 tctt 387  Q
    ||||    
T  41236447 tctt 41236450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 387
Target Start/End: Complemental strand, 42044474 - 42044364
Alignment:
Q  277 taaagaagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagca 376  Q
    |||| |||||| |||||| ||||||| ||||||||| ||||||| | ||  ||||||||||||||||||||||  | |||||||| | |||  |||||||    
T  42044474 taaaaaagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagca 42044375  T
Q  377 cactttctctt 387  Q
    |||||||||||    
T  42044374 cactttctctt 42044364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 384
Target Start/End: Complemental strand, 50526271 - 50526171
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| | ||||||| ||||||| | ||||||||||||||||||||||||||  |||||||||| || ||  |||||||| |||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttc 50526172  T
Q  384 t 384  Q
    |    
T  50526171 t 50526171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 282 - 350
Target Start/End: Original strand, 55475189 - 55475257
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacat 350  Q
    ||||||||||||| ||| ||| ||||||||| ||||||| | |||||||||||||||||||||||||||    
T  55475189 aagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacat 55475257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 394
Target Start/End: Complemental strand, 28480369 - 28480258
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    |||||||| ||| |||||||||||||||||||||||||    || |||| |||||||||||||||||| | |||| ||| | |||| |||| ||||||||    
T  28480369 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28480270  T
Q  383 ctcttgcatctc 394  Q
    ||| | ||||||    
T  28480269 ctccttcatctc 28480258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 394
Target Start/End: Complemental strand, 28481244 - 28481133
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    |||||||| ||| |||||||||||||||||||||||||    || |||| |||||||||||||||||| | |||| ||| | |||| |||| ||||||||    
T  28481244 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28481145  T
Q  383 ctcttgcatctc 394  Q
    ||| | ||||||    
T  28481144 ctccttcatctc 28481133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 394
Target Start/End: Complemental strand, 28482119 - 28482008
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    |||||||| ||| |||||||||||||||||||||||||    || |||| |||||||||||||||||| | |||| ||| | |||| |||| ||||||||    
T  28482119 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28482020  T
Q  383 ctcttgcatctc 394  Q
    ||| | ||||||    
T  28482019 ctccttcatctc 28482008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 40574779 - 40574844
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgaca 349  Q
    ||||||||||| ||||||| |||||||||  |||||| | ||||||||||||||||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgaca 40574844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 396
Target Start/End: Original strand, 29535377 - 29535488
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    ||||||||||| |||||||| |||||||||||||||| |  |||  | |||||||||||| || ||  ||| |||||| |||||| |||| |||||||||    
T  29535377 gagttatgatacatagacaatcttaggtgacaatacatctcttggtatccacacaaaaatatg-cacatggccacgtggatcccacacaaacacactttc 29535475  T
Q  384 tcttgcatctctt 396  Q
    |||| ||||||||    
T  29535476 tctttcatctctt 29535488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 282 - 350
Target Start/End: Complemental strand, 29548061 - 29547993
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacat 350  Q
    ||||||||||||| ||| ||| ||||||||| ||||||| |  ||||||||||||||||||||||||||    
T  29548061 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacat 29547993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 50813993 - 50813889
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    |||||||||||| ||| |||  ||||||||  |||||| |  |||||||||||||||||||||||||| ||||||  |||| |||  ||||| |||||||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacacttt 50813894  T
Q  383 ctctt 387  Q
    |||||    
T  50813893 ctctt 50813889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 328 - 394
Target Start/End: Complemental strand, 18769103 - 18769037
Alignment:
Q  328 acacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctcttgcatctc 394  Q
    ||||||||||||||||||||||| |||||| || ||||||| |||| |||| |||||||| ||||||    
T  18769103 acacccacacaaaaatctgacatgtggtcatgtaaatcccacacaaacacattttctctttcatctc 18769037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 277 - 387
Target Start/End: Original strand, 47986201 - 47986311
Alignment:
Q  277 taaagaagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagca 376  Q
    ||||| |||||||||||| ||| ||| ||||||||| ||||||| |  |||||| ||||||||||||||||||| ||| ||  || | |||  ||||| |    
T  47986201 taaagtagagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagta 47986300  T
Q  377 cactttctctt 387  Q
    |||||||||||    
T  47986301 cactttctctt 47986311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 19670818 - 19670713
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| ||| ||| ||||||||| ||||||| |  ||||||| |||||||||||||||||| ||| ||  || | |||  ||||| ||||||    
T  19670818 aagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 19670719  T
Q  382 tctctt 387  Q
    ||||||    
T  19670718 tctctt 19670713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 29234346 - 29234242
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    ||||| |||||| ||||||| |||||| || ||||||| | ||||| |||  |||||||||||||||  | |||||||| | |||  |||||||||||||    
T  29234346 agagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 29234247  T
Q  383 ctctt 387  Q
    |||||    
T  29234246 ctctt 29234242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 393
Target Start/End: Original strand, 29977883 - 29977994
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| ||| | |||| |||||| ||||||| |  || ||||||||||||||||||||||  | ||||  || | |||| ||||||||||||    
T  29977883 aagagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactt 29977982  T
Q  382 tctcttgcatct 393  Q
    |||||| |||||    
T  29977983 tctctttcatct 29977994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 387
Target Start/End: Complemental strand, 56300233 - 56300162
Alignment:
Q  316 atacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||  |||||||   |||| |||||||||||||    
T  56300233 atacatcatttgacatccacacaaaaatctgacatgtggtcatatgaatcctgcacaaacacactttctctt 56300162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 350
Target Start/End: Complemental strand, 8343263 - 8343197
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacat 350  Q
    ||||||||||| ||| ||| ||||||||| ||||||| | ||||||||| ||| |||||||||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacat 8343197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 387
Target Start/End: Complemental strand, 24995210 - 24995104
Alignment:
Q  281 gaagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacact 380  Q
    ||||||| |||||| || |||| |||||| || ||||||| | ||||||||||||| |||||| |||||  | |||||||| | |||  ||||||||| |    
T  24995210 gaagagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacatt 24995111  T
Q  381 ttctctt 387  Q
    |||||||    
T  24995110 ttctctt 24995104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 350
Target Start/End: Complemental strand, 55079814 - 55079748
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacat 350  Q
    ||||||||||| ||| ||| ||||||||| ||||||| |  |||||||||| |||||||||||||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgacat 55079748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 281 - 350
Target Start/End: Original strand, 32766955 - 32767024
Alignment:
Q  281 gaagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacat 350  Q
    |||||||||||||| ||| |||  |||||||| ||||||| |  |||||||||| |||||||||||||||    
T  32766955 gaagagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacat 32767024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 304 - 387
Target Start/End: Complemental strand, 17983823 - 17983740
Alignment:
Q  304 ccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    ||||||||| ||||||| |  |||||||||||||||||||||||||| ||| ||  || | |||  ||||| ||||||||||||    
T  17983823 ccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctt 17983740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 48647828 - 48647723
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||| | ||| ||| |||||||| |||||||| |  || ||||||||| |||||||| |||  |||||||||| |  ||  ||||||||| ||    
T  48647828 aagagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatt 48647729  T
Q  382 tctctt 387  Q
    ||||||    
T  48647728 tctctt 48647723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 3e-24; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 19436289 - 19436184
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||||||  | |||||||| |||||  | ||||||||||    
T  19436289 aagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactt 19436190  T
Q  382 tctctt 387  Q
    ||||||    
T  19436189 tctctt 19436184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 282 - 394
Target Start/End: Original strand, 18207178 - 18207289
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| ||||||||||||||||| ||||||| |  |||||||||| |||||||||| |||  ||| |||||||| |||| ||||||||||||    
T  18207178 aagagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtgg-cacgtgaaccccacacaagcacactt 18207276  T
Q  382 tctcttgcatctc 394  Q
    |||||| ||||||    
T  18207277 tctctttcatctc 18207289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 36362014 - 36361910
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    ||||| |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  | |||||||| | |||| |||||||||||||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36361915  T
Q  383 ctctt 387  Q
    |||||    
T  36361914 ctctt 36361910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 387
Target Start/End: Original strand, 3784000 - 3784098
Alignment:
Q  289 atgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  | |||||||| |||||  ||||||||||||||||||    
T  3784000 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctctt 3784098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 3434561 - 3434665
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    ||||| |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||| ||||||  | |||||||| |||||  |||||||||||||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacacttt 3434660  T
Q  383 ctctt 387  Q
    |||||    
T  3434661 ctctt 3434665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 36362025 - 36362129
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    ||||| |||||| ||||||| |||||||||  |||||| | ||||||||||||||||||||||||||  | |||||||| | |||| |||||||||||||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36362124  T
Q  383 ctctt 387  Q
    |||||    
T  36362125 ctctt 36362129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 38267040 - 38267143
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||| ||||||||||| | ||||||||||||||||||||||||||  | |||||||| | |||  ||||||||||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38267139  T
Q  384 tctt 387  Q
    ||||    
T  38267140 tctt 38267143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 7389387 - 7389492
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| ||||||| ||||||||| |||||||   ||||||||||||||||||||||||||  | |||||||| | |||  ||||||||||||    
T  7389387 aagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 7389486  T
Q  382 tctctt 387  Q
    ||||||    
T  7389487 tctctt 7389492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 40957705 - 40957810
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| |||||||  |||||||| |||||||   ||||| ||||||||||||||||||||  | |||||||| ||||| |||||||||||||    
T  40957705 aagagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacactt 40957804  T
Q  382 tctctt 387  Q
    ||||||    
T  40957805 tctctt 40957810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 19329842 - 19329945
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  |  ||||||| | |||  ||||||||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 19329941  T
Q  384 tctt 387  Q
    ||||    
T  19329942 tctt 19329945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 387
Target Start/End: Original strand, 3694372 - 3694470
Alignment:
Q  289 atgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    |||||| ||| ||| ||||||||||||||||| | ||| ||||||||||||||||||||||  | |||| ||| |||||  ||||||||||||||||||    
T  3694372 atgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctctt 3694470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 387
Target Start/End: Original strand, 35522877 - 35522979
Alignment:
Q  285 agttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttct 384  Q
    |||||||||| ||||||| ||||| ||| ||||||| ||||| ||||||||||||||||||||||  ||| ||  || |||||  |||||||||||||||    
T  35522877 agttatgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttct 35522976  T
Q  385 ctt 387  Q
    |||    
T  35522977 ctt 35522979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 284 - 394
Target Start/End: Complemental strand, 39256023 - 39255914
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    ||||||||||| ||||||||||||||||| ||||||| || |||| ||||| ||||||||||||||  ||| |||||| |  ||| ||||| ||||||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgtgg-cacgtggactccacacaagaacactttc 39255925  T
Q  384 tcttgcatctc 394  Q
    |||| ||||||    
T  39255924 tctttcatctc 39255914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 8080485 - 8080380
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| ||||||| ||||||||| ||||||| | ||||||||| ||| ||||||||||||  | |||||||| | |||  ||||||||||||    
T  8080485 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 8080386  T
Q  382 tctctt 387  Q
    ||||||    
T  8080385 tctctt 8080380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 35137533 - 35137636
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||||||| ||||||| | |||||||||||||||||||||| |||  | |||||||| | |||  |||| |||||||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttc 35137632  T
Q  384 tctt 387  Q
    ||||    
T  35137633 tctt 35137636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 21234401 - 21234466
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgaca 349  Q
    ||||||||||| ||||||| ||||||||||||||||| | |||||||| ||||||||||| |||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgaca 21234466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 36208171 - 36208276
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| ||||||| |||||||||  ||||||    |||||||||||||||||| ||||||| |||||||||| | ||   ||||||||| ||    
T  36208171 aagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattt 36208270  T
Q  382 tctctt 387  Q
    ||||||    
T  36208271 tctctt 36208276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 38837215 - 38837320
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| ||||||| ||||||||| ||||||| | ||  ||||| ||||||||||||||||  | |||||||| | |||  ||||||||||||    
T  38837215 aagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 38837314  T
Q  382 tctctt 387  Q
    ||||||    
T  38837315 tctctt 38837320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 4999614 - 4999511
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| |||||| || ||||||| | |||||||||||||||||||||||| |  | |||||||| | |||  |||| |||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  384 tctt 387  Q
    ||||    
T  4999514 tctt 4999511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 325 - 396
Target Start/End: Complemental strand, 16374883 - 16374812
Alignment:
Q  325 ttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctcttgcatctctt 396  Q
    |||||| ||||||||||||||||||  |||||||||| ||| || |||||||||| ||||||| ||||||||    
T  16374883 ttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctctttcatctctt 16374812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 350
Target Start/End: Original strand, 22343360 - 22343427
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacat 350  Q
    |||||||||||| ||| ||| ||||||||| ||||||| |  ||||||||||||||||||||||||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacat 22343427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 345
Target Start/End: Complemental strand, 35468964 - 35468894
Alignment:
Q  275 aataaagaagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatct 345  Q
    |||||| |||||| |||||| ||||||| |||||| || ||||||| ||||||||||||||| ||||||||    
T  35468964 aataaaaaagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatct 35468894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 284 - 394
Target Start/End: Original strand, 41423682 - 41423792
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    ||||||||||| ||||||| | |||| ||  |||||| |  |||||||  ||||||||||||||||| |||||||||  ||||| |||||||| | ||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttc 41423781  T
Q  384 tcttgcatctc 394  Q
    |||| ||||||    
T  41423782 tctttcatctc 41423792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 350
Target Start/End: Original strand, 38044194 - 38044263
Alignment:
Q  281 gaagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacat 350  Q
    |||||||||||||| ||| ||| ||||||||| ||||||| |  |||||| |||||||||||||||||||    
T  38044194 gaagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacat 38044263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 46374902 - 46374837
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgaca 349  Q
    ||||||||||| ||||||| ||||||||| ||| ||| | ||| ||||||||||||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgaca 46374837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 8238212 - 8238316
Alignment:
Q  284 gagttatgatagatagacaacct-taggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    ||||||||||| ||| ||| ||| |||||| ||||||| | ||||||||||||||||||||||||||| | ||||  || | |||  ||||| |||||||    
T  8238212 gagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacacttt 8238311  T
Q  383 ctctt 387  Q
    |||||    
T  8238312 ctctt 8238316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 41915740 - 41915844
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    |||||||||||| ||| ||| ||||||||| ||||||| |  |||||||| ||||||||||||||||| ||| ||  || | |||  ||||| |||||||    
T  41915740 agagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 41915839  T
Q  383 ctctt 387  Q
    |||||    
T  41915840 ctctt 41915844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 300 - 394
Target Start/End: Complemental strand, 2318327 - 2318233
Alignment:
Q  300 acaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctcttgcatctc 394  Q
    |||||| |||||| ||| ||| |  |||||||||||||||||||||||| | |||||||||| | || | | ||||| |||||||||| ||||||    
T  2318327 acaaccataggtggcaagacacctcttgacacccacacaaaaatctgacgtgtggtcacgtggacccgacataagcatactttctctttcatctc 2318233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 350
Target Start/End: Complemental strand, 32564526 - 32564460
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacat 350  Q
    ||||||||||| ||| |||  |||||||| ||||||| |  ||||||||||||||||||||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacat 32564460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 387
Target Start/End: Complemental strand, 32951588 - 32951490
Alignment:
Q  289 atgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    |||||| |||||||  ||||| |||||||||| | ||| ||| |||||||||||||| |||  | |||||||| | |||  ||||||||||||||||||    
T  32951588 atgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctt 32951490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 278 - 363
Target Start/End: Complemental strand, 46033907 - 46033822
Alignment:
Q  278 aaagaagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaa 363  Q
    |||| |||||||||||| ||||| |  |||||||| ||||||| | ||| ||||||||| ||||||||||||  ||||||| ||||    
T  46033907 aaagtagagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaa 46033822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 10343665 - 10343598
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacat-ttgacacccacacaaaaatctgaca 349  Q
    |||||| |||||| ||||||| |||||||||  |||||| ||| |||||||||||||||||||||||||    
T  10343665 aagagtaatgatacatagacacccttaggtggaaataca-catcttgacacccacacaaaaatctgaca 10343598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 283 - 347
Target Start/End: Original strand, 26296643 - 26296707
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctga 347  Q
    |||||||||||| ||||||| ||||||||||||||| | | ||| ||| ||||| ||||||||||    
T  26296643 agagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctga 26296707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 386
Target Start/End: Complemental strand, 27744369 - 27744307
Alignment:
Q  324 tttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctct 386  Q
    ||||| ||||||||||||||||||||| ||| |||||| |||||  | ||||||| |||||||    
T  27744369 tttgatacccacacaaaaatctgacatgtggccacgtggatccctcataagcacattttctct 27744307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 350
Target Start/End: Complemental strand, 40846213 - 40846147
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacat 350  Q
    ||||||||||| ||| ||| ||||||||| ||||||| |  |||||| |||||||||||||| ||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacat 40846147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 340
Target Start/End: Original strand, 31735884 - 31735940
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaa 340  Q
    ||||||||||| ||||||| ||||||||| |||||||   ||| |||||||||||||    
T  31735884 gagttatgatacatagacatccttaggtggcaatacactctttaacacccacacaaa 31735940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 3e-24; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 10249484 - 10249379
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||||||  | |||||||| | |||  ||||||||||||    
T  10249484 aagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 10249385  T
Q  382 tctctt 387  Q
    ||||||    
T  10249384 tctctt 10249379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 283 - 402
Target Start/End: Complemental strand, 7465836 - 7465717
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    ||||| |||||| ||||||| |||||| || ||||||| | ||||||||||||||||||||||||||  | |||||||| | |||| |||||||||||||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 7465737  T
Q  383 ctcttgcatctcttcatctc 402  Q
    |||||  |||||||| ||||    
T  7465736 ctcttttatctcttcttctc 7465717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 13438343 - 13438446
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||||||  | |||||||| | |||  ||||||||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13438442  T
Q  384 tctt 387  Q
    ||||    
T  13438443 tctt 13438446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 283 - 384
Target Start/End: Complemental strand, 32505749 - 32505648
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    ||||| |||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||||||  | |||||||| | |||  |||||||||||||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32505650  T
Q  383 ct 384  Q
    ||    
T  32505649 ct 32505648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 279 - 387
Target Start/End: Original strand, 30915458 - 30915566
Alignment:
Q  279 aagaagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcaca 378  Q
    ||||||||| |||||| ||||||| ||||||||| ||||||| | |||||| |||||| ||||||||||||  | |||||||| | ||| ||||||||||    
T  30915458 aagaagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcaca 30915557  T
Q  379 ctttctctt 387  Q
    |||||||||    
T  30915558 ctttctctt 30915566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 17473020 - 17473123
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| |||||| || ||||||| | ||||||||||||||||||||||||||  | |||||||| |||||  ||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  384 tctt 387  Q
    ||||    
T  17473120 tctt 17473123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 40614002 - 40613899
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    ||||||||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  ||| ||| || | |||  ||||||||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttc 40613903  T
Q  384 tctt 387  Q
    ||||    
T  40613902 tctt 40613899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 284 - 394
Target Start/End: Complemental strand, 17820104 - 17819994
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    ||||||||||| |||||||||  |||||| ||||||| |  |||||||||||||||||||||||||| |||| ||||| | |||| |||| |||| ||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacattttc 17820005  T
Q  384 tcttgcatctc 394  Q
    |||| ||||||    
T  17820004 tctttcatctc 17819994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 289 - 387
Target Start/End: Original strand, 28863460 - 28863558
Alignment:
Q  289 atgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  | |||||||| | |||  ||||||||||||||||||    
T  28863460 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctt 28863558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 9058478 - 9058583
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  | |||| ||| | |||  ||||||||||||    
T  9058478 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 9058577  T
Q  382 tctctt 387  Q
    ||||||    
T  9058578 tctctt 9058583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 33436202 - 33436097
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| ||||||| ||||||||| ||||||| | |||||||||||||||||||||| |||  | |||||||| | |||  ||||||||||||    
T  33436202 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactt 33436103  T
Q  382 tctctt 387  Q
    ||||||    
T  33436102 tctctt 33436097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 42257191 - 42257296
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| ||||||| | ||||||| ||||||| ||||||||||||||| ||||||||||||  ||| ||| || | |||  ||||||||||||    
T  42257191 aagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactt 42257290  T
Q  382 tctctt 387  Q
    ||||||    
T  42257291 tctctt 42257296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 5574589 - 5574485
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    ||||| |||||| |||||||  |||||||| ||||||| | ||||||||||||| ||||||||||||  | |||||||| |||||  |||||||||||||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 5574490  T
Q  383 ctctt 387  Q
    |||||    
T  5574489 ctctt 5574485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 26891606 - 26891501
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| |||| || ||||||||| ||||||| |  | |||||||||||||||||||||||| |||||||||| | | |  ||||||||| ||    
T  26891606 aagagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacattt 26891507  T
Q  382 tctctt 387  Q
    ||||||    
T  26891506 tctctt 26891501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 384
Target Start/End: Original strand, 4060685 - 4060785
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||||||||||||||| | ||||||| ||||||||||||||||||  | || ||||| |||||  | ||||||||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4060784  T
Q  384 t 384  Q
    |    
T  4060785 t 4060785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 38732354 - 38732457
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    ||||||||||| ||| ||| ||||| ||||||||||| |  |||||||||||||||||||||||||| ||||||  || | |||  ||||| ||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  384 tctt 387  Q
    ||||    
T  38732454 tctt 38732457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 40701478 - 40701581
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  | || ||||| | |||  |||| |||||||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 40701577  T
Q  384 tctt 387  Q
    ||||    
T  40701578 tctt 40701581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 284 - 350
Target Start/End: Original strand, 43490121 - 43490187
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacat 350  Q
    ||||||||||| ||| ||| ||||||||||||||||| |  ||||||||||||||||||||||||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacat 43490187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 28381755 - 28381652
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||||||| ||||||| | || |||||||||||||||||||||||  | ||||| || |  ||  ||||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttc 28381656  T
Q  384 tctt 387  Q
    ||||    
T  28381655 tctt 28381652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 289 - 387
Target Start/End: Complemental strand, 19930915 - 19930817
Alignment:
Q  289 atgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    |||||| ||||||| ||||||||| ||||||| | ||||||| ||||||||||||||||||  | |||| ||| | |||  |||| |||||||||||||    
T  19930915 atgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctctt 19930817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 20700813 - 20700918
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| ||||||| ||||| ||| ||||||| | |||||| || ||||||||||||||||  | |||||||| | |||  | ||||||||||    
T  20700813 aagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactt 20700912  T
Q  382 tctctt 387  Q
    ||||||    
T  20700913 tctctt 20700918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 45097837 - 45097732
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| ||| ||| ||||||||| ||||||| |  |||||||||| ||||||||||||||| ||| ||  || | |||  ||||| ||||||    
T  45097837 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 45097738  T
Q  382 tctctt 387  Q
    ||||||    
T  45097737 tctctt 45097732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 36168835 - 36168939
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    |||||||||||| ||||||| |||||| |||||||||| | ||| || ||||||||||||| |||||  ||| ||| || | |||  ||||||| |||||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatacttt 36168934  T
Q  383 ctctt 387  Q
    |||||    
T  36168935 ctctt 36168939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 27864704 - 27864807
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||| ||| ||||||| | ||||||| ||||||||||||||||||  |  ||||||| | |||  | ||||||||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttc 27864803  T
Q  384 tctt 387  Q
    ||||    
T  27864804 tctt 27864807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 38273244 - 38273177
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgaca 349  Q
    ||||||||||||| |||||||  ||||| || ||||||| | ||| ||||||||||||||||||||||    
T  38273244 aagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgaca 38273177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 349
Target Start/End: Original strand, 2533123 - 2533188
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgaca 349  Q
    |||||||||||| ||||||| ||||| ||| ||||||| | ||||||| ||||||||||||||||||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgaca 2533188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 349
Target Start/End: Original strand, 33436210 - 33436276
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgaca 349  Q
    ||||| |||||| ||||||| |||||| || ||||||| | ||||||||||||| ||||||||||||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgaca 33436276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 394
Target Start/End: Original strand, 41575142 - 41575248
Alignment:
Q  289 atgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatccc-atacaagcacactttctctt 387  Q
    |||||| ||||||| |||||| ||  |||||| | |||||||  ||||||||||| |||||| |||||| ||| | ||| | ||||||||||||||||||    
T  41575142 atgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttctctt 41575241  T
Q  388 gcatctc 394  Q
     ||||||    
T  41575242 tcatctc 41575248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 304 - 387
Target Start/End: Complemental strand, 2997567 - 2997484
Alignment:
Q  304 ccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    ||||||||| ||||||| |  |||||||||||||||||||||||||| ||| ||  || | |||  ||||| ||||||||||||    
T  2997567 ccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctt 2997484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 38882915 - 38882849
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgaca 349  Q
    |||||| |||||| ||||||| ||||||||| ||||| | | ||||||| ||||||||||||||||||    
T  38882915 aagagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgaca 38882849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 384
Target Start/End: Original strand, 3737986 - 3738043
Alignment:
Q  327 gacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttct 384  Q
    |||||||||||||||||||||||| |||||| ||| | |||  ||||||||| |||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcacattttct 3738043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 282 - 394
Target Start/End: Complemental strand, 15428842 - 15428730
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| ||| ||| ||||| ||| | ||||| |  || |||| |||||||||||||||||| ||| || || || ||||  ||| |||| ||    
T  15428842 aagagttatgatacataaacatccttatgtggccatacaccccttaacactcacacaaaaatctgacatgtggccatgtaaaccccacgcaaacacattt 15428743  T
Q  382 tctcttgcatctc 394  Q
    |||||| ||||||    
T  15428742 tctctttcatctc 15428730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 12831047 - 12831150
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||||||  | |||||||| | |||  ||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  384 tctt 387  Q
    ||||    
T  12831147 tctt 12831150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 14547920 - 14548025
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| | |||| ||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||  | |||||||| | |||  ||||||||||||    
T  14547920 aagagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 14548019  T
Q  382 tctctt 387  Q
    ||||||    
T  14548020 tctctt 14548025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 10284733 - 10284628
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| ||||||| ||||| |||||||||||   |||||||||||||||||||| |||||  | |||||||| | |||  ||||||||||||    
T  10284733 aagagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactt 10284634  T
Q  382 tctctt 387  Q
    ||||||    
T  10284633 tctctt 10284628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 283 - 384
Target Start/End: Original strand, 37038478 - 37038579
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    ||||| |||||| ||||||| | ||||||| ||||||| | ||||||||||||||||||||||||||  | |||||||| |||||  |||||||||||||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 37038577  T
Q  383 ct 384  Q
    ||    
T  37038578 ct 37038579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 504221 - 504118
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  | |||||||| | |||  |||||||||| |||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattc 504122  T
Q  384 tctt 387  Q
    ||||    
T  504121 tctt 504118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 15197333 - 15197436
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| |||||||  |||||||| ||||||| | ||||||||||||||||||||||||||  | |||||||| | |||  ||||||||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 15197432  T
Q  384 tctt 387  Q
    ||||    
T  15197433 tctt 15197436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 34012396 - 34012293
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| |||||||||  |||||| | |||||||||||||||||||| |||||  | |||||||| |||||  ||||||||||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 34012297  T
Q  384 tctt 387  Q
    ||||    
T  34012296 tctt 34012293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 280 - 387
Target Start/End: Original strand, 34307212 - 34307319
Alignment:
Q  280 agaagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacac 379  Q
    ||||||||||||||| ||| ||| ||||||||| ||||||| |  |||||||||||||||||||||||||| ||| ||  |||| |||  ||||| ||||    
T  34307212 agaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacac 34307311  T
Q  380 tttctctt 387  Q
    ||||||||    
T  34307312 tttctctt 34307319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 43414681 - 43414578
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    ||||||||||| ||||||| |||||| || ||| ||| | |||||||||||||||||||||| |||  ||||||| || |||||  ||||||||||||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttc 43414582  T
Q  384 tctt 387  Q
    ||||    
T  43414581 tctt 43414578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 387
Target Start/End: Original strand, 5957835 - 5957933
Alignment:
Q  289 atgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    |||||| |||||||  |||||||| ||||||| | ||||||||||||||||||||||||||  | |||||||| |||||  |||| |||||||||||||    
T  5957835 atgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttctctt 5957933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 393
Target Start/End: Original strand, 17443824 - 17443934
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    |||||||||||| |||||||||||||||||||||||||    || |||| |||||||||||||||||| | |||| ||| | |||| ||||  |||||||    
T  17443824 agagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacacttt 17443923  T
Q  383 ctcttgcatct 393  Q
    ||||| |||||    
T  17443924 ctctttcatct 17443934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 1180040 - 1179937
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| |||||||||  |||||| | ||||||||||||||||||||||||||  | |||| ||| || ||  ||||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  384 tctt 387  Q
    ||||    
T  1179940 tctt 1179937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 23122697 - 23122594
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||| ||| ||||||| | ||||||||||||||||||||||||||  | |||||||| | |||  | ||||||||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 23122598  T
Q  384 tctt 387  Q
    ||||    
T  23122597 tctt 23122594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 286 - 387
Target Start/End: Complemental strand, 10621185 - 10621084
Alignment:
Q  286 gttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctc 385  Q
    ||||||||| ||||||| |||||||||  |||||| | ||||||||||||||||||||||||||  | | ||| |  |||||  ||||||||||||||||    
T  10621185 gttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctc 10621086  T
Q  386 tt 387  Q
    ||    
T  10621085 tt 10621084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 16056503 - 16056398
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| ||| ||| ||||| ||||||||||| |  |||||||||||||||||||||||||| ||| ||  || | |||  ||||| ||||||    
T  16056503 aagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 16056404  T
Q  382 tctctt 387  Q
    ||||||    
T  16056403 tctctt 16056398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 16383375 - 16383480
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| ||| ||| ||||||||| ||||||| |  |||||||||||||||||||||||||| ||| ||  || | |||  ||||| ||||||    
T  16383375 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 16383474  T
Q  382 tctctt 387  Q
    ||||||    
T  16383475 tctctt 16383480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 281 - 394
Target Start/End: Original strand, 42221512 - 42221625
Alignment:
Q  281 gaagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacact 380  Q
    ||||||| |||||| ||| ||| |||||||||||||||||    | |||||||||||||||||||||||  |  |||  || | ||||||||||||||||    
T  42221512 gaagagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacact 42221611  T
Q  381 ttctcttgcatctc 394  Q
    ||||||| ||||||    
T  42221612 ttctctttcatctc 42221625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 44507188 - 44507084
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    ||||| |||||| ||||||| |||||||||  ||||||   ||| ||||||||||||||||||||||  | |||||||| | ||| |||||||| |||||    
T  44507188 agagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatacttt 44507089  T
Q  383 ctctt 387  Q
    |||||    
T  44507088 ctctt 44507084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 387
Target Start/End: Original strand, 9122229 - 9122288
Alignment:
Q  328 acacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    ||||||||||||||||||||||| | |||||||| |||||  ||||||||||||||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctctt 9122288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 15048281 - 15048179
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    ||||||||||| ||||||| ||||||||| ||||||| | ||||||| ||||||||||||||||||  | | ||| || | |||  ||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgaca-ccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactttc 15048183  T
Q  384 tctt 387  Q
    ||||    
T  15048182 tctt 15048179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 40424043 - 40423940
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||| | ||||||||| ||||||| | ||||||| ||||||||||||||||||  | |||| ||| | |||  ||||||||||||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 40423944  T
Q  384 tctt 387  Q
    ||||    
T  40423943 tctt 40423940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 277 - 347
Target Start/End: Original strand, 24307622 - 24307692
Alignment:
Q  277 taaagaagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctga 347  Q
    |||| ||||||||||||| ||| ||| ||||||||| ||||||| |  |||||||||||||||||||||||    
T  24307622 taaaaaagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 347
Target Start/End: Complemental strand, 24307895 - 24307830
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctga 347  Q
    ||||||||||||| ||| ||| ||||||||| ||||||| |  |||||||||||||||||||||||    
T  24307895 aagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctga 24307830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 387
Target Start/End: Original strand, 38229470 - 38229531
Alignment:
Q  326 tgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    ||||||||||||||||||||||||| |||||||||| || |  |||||||||| ||||||||    
T  38229470 tgacacccacacaaaaatctgacatgtggtcacgtggattctgtacaagcacattttctctt 38229531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 387
Target Start/End: Complemental strand, 8841512 - 8841429
Alignment:
Q  304 ccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    ||||||||| || |||| | |||||||||||||||||||||| |||  | |||||||| | |||  ||||||||||||||||||    
T  8841512 ccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctt 8841429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 350
Target Start/End: Complemental strand, 30479574 - 30479508
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacat 350  Q
    ||||||||||| ||| ||| ||||||||| ||||||| | ||||||| ||||| |||||||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacat 30479508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 32032714 - 32032827
Alignment:
Q  273 taaataaagaagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccataca 372  Q
    ||||||||  |||||||||||| ||| ||| ||||||||| ||||||| |  |||||| ||||||||||||||||||| ||| ||  || ||||   |||    
T  32032714 taaataaaatagagttatgatacataaacacccttaggtggcaatacatc-cttgacatccacacaaaaatctgacatgtggccatatggatcctgcaca 32032812  T
Q  373 agcacactttctctt 387  Q
    || ||||||||||||    
T  32032813 agtacactttctctt 32032827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 4854965 - 4854860
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| ||||||| ||||||||| ||||||| | ||| ||||| ||| |||||||||| || ||| ||| || | ||   ||||||||||||    
T  4854965 aagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactt 4854866  T
Q  382 tctctt 387  Q
    ||||||    
T  4854865 tctctt 4854860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 284 - 361
Target Start/End: Complemental strand, 14055692 - 14055615
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtg 361  Q
    ||||||||||| || |||| |||||||||||||||||    |||||| |||||||||||||| |||| | ||||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtg 14055615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 15259031 - 15258926
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| ||||| |  ||||| || ||||||| |  | |||| ||||| ||||||||||||| |||||||||| | ||   ||||||||| ||    
T  15259031 aagagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattt 15258932  T
Q  382 tctctt 387  Q
    ||||||    
T  15258931 tctctt 15258926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 20075034 - 20074969
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgaca 349  Q
    |||| |||||| ||||||| ||||||||| |||||||   ||||||||||||| |||||| |||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgaca 20074969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 4e-23; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 49811629 - 49811562
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgaca 349  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  49811629 aagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgaca 49811562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 32813245 - 32813350
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| ||||||| ||||||||| ||||||| | ||| ||||||||||||||||||||||  ||||||| || | |||  ||||||||||||    
T  32813245 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactt 32813344  T
Q  382 tctctt 387  Q
    ||||||    
T  32813345 tctctt 32813350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 3000319 - 3000422
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||| ||| ||||||||| ||||||| | ||||||||||||||||||||||||||  | |||||||| | ||| |||||||||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  384 tctt 387  Q
    ||||    
T  3000419 tctt 3000422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 282 - 384
Target Start/End: Original strand, 2581913 - 2582015
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  | |||||||| | |||  ||||||||||||    
T  2581913 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 2582012  T
Q  382 tct 384  Q
    |||    
T  2582013 tct 2582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 282 - 387
Target Start/End: Original strand, 38595152 - 38595257
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| ||| ||| | ||||||| ||||||| | ||||||||||||||||||||||||||  | |||||||| | ||| |||||||||||||    
T  38595152 aagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 38595251  T
Q  382 tctctt 387  Q
    ||||||    
T  38595252 tctctt 38595257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 283 - 384
Target Start/End: Complemental strand, 51898784 - 51898683
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    ||||| |||||| ||||||| | ||||||| ||||||| | ||||||||||||||||||||||||||  | |||||||| |||||  |||||||||||||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 51898685  T
Q  383 ct 384  Q
    ||    
T  51898684 ct 51898683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 9474976 - 9474873
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  | |||||||| | |||  |||| |||||||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttc 9474877  T
Q  384 tctt 387  Q
    ||||    
T  9474876 tctt 9474873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 26440734 - 26440837
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||||| |||||||||||| |||||| |||||||||| | ||| ||||||||||||||||||||||  ||| ||| || |||||  | ||||||||||||    
T  26440734 gagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactttc 26440833  T
Q  384 tctt 387  Q
    ||||    
T  26440834 tctt 26440837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 27564835 - 27564732
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  |  ||||||| | |||  ||||||||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 27564736  T
Q  384 tctt 387  Q
    ||||    
T  27564735 tctt 27564732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 383
Target Start/End: Original strand, 37649198 - 37649297
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| | ||||||| |||||||   ||||||||||||||||||||||||||  ||||||||||||| ||  ||||||||||||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactttc 37649297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 47452420 - 47452317
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| |||||||||  |||||| | |||||||||||||||||||||| |||  | |||||||| |||||  ||||||||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttc 47452321  T
Q  384 tctt 387  Q
    ||||    
T  47452320 tctt 47452317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 48716382 - 48716279
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||||||| ||||||| ||||||||| ||||||||||||||||||  | |||||||| | |||  |||||||||||||     
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttta 48716283  T
Q  384 tctt 387  Q
    ||||    
T  48716282 tctt 48716279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 285 - 387
Target Start/End: Original strand, 44453980 - 44454082
Alignment:
Q  285 agttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttct 384  Q
    |||||||||| ||||||| | ||| ||| ||||||| |  |||| ||||||||||||||||||||| |||| ||||| |||||| ||||||||||||| |    
T  44453980 agttatgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacacttttt 44454079  T
Q  385 ctt 387  Q
    |||    
T  44454080 ctt 44454082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 387
Target Start/End: Complemental strand, 44548471 - 44548373
Alignment:
Q  289 atgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    |||||| ||||||| | ||||||| ||||||| ||||||| ||||||||||||||||||||  | |||||||| | |||  ||||||||||||||||||    
T  44548471 atgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctt 44548373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 8346490 - 8346385
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| |||| || | ||||||| ||||||| ||||||||||||||||||||||||||||  | |||||||| | ||   ||||||||||||    
T  8346490 aagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactt 8346391  T
Q  382 tctctt 387  Q
    ||||||    
T  8346390 tctctt 8346385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 279 - 387
Target Start/End: Complemental strand, 38632426 - 38632318
Alignment:
Q  279 aagaagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcaca 378  Q
    ||||||||| |||||| ||||||| ||||||||| ||||||| | ||| ||| ||||||||||||||||||  | |||||||| | |||  |||||||||    
T  38632426 aagaagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 38632327  T
Q  379 ctttctctt 387  Q
    |||| ||||    
T  38632326 ctttttctt 38632318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 43132 - 43235
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| |||||||  |||||| ||||||||| | ||||||||||||||||||||||||||  | |||||||| |  ||  ||||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  384 tctt 387  Q
    ||||    
T  43232 tctt 43235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 5959102 - 5958997
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| ||| ||| ||||| ||| ||||||| |  |||||||||||||||||||||||||| ||||||  || | |||  ||||| ||||||    
T  5959102 aagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactt 5959003  T
Q  382 tctctt 387  Q
    ||||||    
T  5959002 tctctt 5958997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 387
Target Start/End: Complemental strand, 37926539 - 37926435
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    |||||||||||| ||||| | | ||||||| ||||||| | ||| ||||||||| ||||||||||||  ||| ||| || ||||| |||||| |||||||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacacttt 37926440  T
Q  383 ctctt 387  Q
    |||||    
T  37926439 ctctt 37926435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 50630457 - 50630561
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    ||||| |||||| ||||| | ||||||||| ||||||| | ||||  ||||||||||||||||||||  | |||||||| | |||  |||||||||||||    
T  50630457 agagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 50630556  T
Q  383 ctctt 387  Q
    |||||    
T  50630557 ctctt 50630561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 41608593 - 41608490
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    ||||||||||| ||| ||| ||||||||| ||||||| |  ||||||| |||||||||||||||||| ||| ||  || | ||| |||||| ||||||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttc 41608494  T
Q  384 tctt 387  Q
    ||||    
T  41608493 tctt 41608490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 50591100 - 50590997
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    ||||||||||| ||| ||| ||||||||| ||||||| |  |||||||||||||||||||||||||| ||| ||  || | |||  ||||| ||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 50591001  T
Q  384 tctt 387  Q
    ||||    
T  50591000 tctt 50590997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 387
Target Start/End: Original strand, 13414787 - 13414864
Alignment:
Q  310 gtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    ||||||||||| | |||||||||||||||||||||| |||  | |||||||| | |||| ||||||||| ||||||||    
T  13414787 gtgacaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctctt 13414864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 282 - 350
Target Start/End: Complemental strand, 45044662 - 45044594
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacat 350  Q
    ||||||||||||| ||| |   ||||||||| ||||||| ||||||||||||| |||||||||||||||    
T  45044662 aagagttatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgacat 45044594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 289 - 387
Target Start/End: Original strand, 26274437 - 26274535
Alignment:
Q  289 atgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    |||||| ||||||| ||||| ||| ||||||| ||||||||| ||||| ||||||||||||  | |||||||| ||||   ||||| ||||||| ||||    
T  26274437 atgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacactttttctt 26274535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 327 - 384
Target Start/End: Original strand, 48489343 - 48489400
Alignment:
Q  327 gacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttct 384  Q
    |||| ||||||||||||||||||| |||||||||| |||||  ||||||||| |||||    
T  48489343 gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttct 48489400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 283 - 349
Target Start/End: Original strand, 7740732 - 7740798
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgaca 349  Q
    |||||||||||| || |||||||||| ||||||||||| |  |||||||| ||| |||||| |||||    
T  7740732 agagttatgatacattgacaaccttatgtgacaatacatccattgacacctacataaaaatatgaca 7740798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 361
Target Start/End: Original strand, 6260870 - 6260947
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtg 361  Q
    ||||||||||||||||| | |||||||||  |||||| |  |  ||||||||| |||||||| |||| ||||||||||    
T  6260870 gagttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtg 6260947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 41758804 - 41758908
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    ||||| |||||| ||||||| | |||  || ||||||| | ||||||| ||||||||||||||||||  | ||||| || | |||  |||| ||||||||    
T  41758804 agagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacacttt 41758903  T
Q  383 ctctt 387  Q
    |||||    
T  41758904 ctctt 41758908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 31976247 - 31976351
Alignment:
Q  283 agagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacacttt 382  Q
    |||||||||||| ||||||| ||||||||| ||||| | | ||| ||||||||||||||||||||||  ||||||| |||| |||  |||||||||||||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacacttt 31976346  T
Q  383 ctctt 387  Q
    |||||    
T  31976347 ctctt 31976351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 17598554 - 17598657
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  | |||||||| | |||  ||||||||||||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttc 17598653  T
Q  384 tctt 387  Q
    ||||    
T  17598654 tctt 17598657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 289 - 387
Target Start/End: Complemental strand, 23128222 - 23128124
Alignment:
Q  289 atgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    |||||| ||||||| | ||| |||| |||||| | ||||||||||||||||||||||||||  | |||||||| |||||| ||||||||||||||||||    
T  23128222 atgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctctt 23128124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 291 - 387
Target Start/End: Original strand, 32869685 - 32869781
Alignment:
Q  291 gatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    |||| ||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||  | |||||||| | |||  ||||||||||||||||||    
T  32869685 gatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctt 32869781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 387
Target Start/End: Original strand, 11427615 - 11427721
Alignment:
Q  283 agagttatgatagatagacaacct--taggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacact 380  Q
    ||||| |||||| ||||||| |||  |||||| ||||||| | ||||||||||||||||||||||||||  | |||||||| |||||  |||||||||||    
T  11427615 agagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 11427714  T
Q  381 ttctctt 387  Q
    |||||||    
T  11427715 ttctctt 11427721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 387
Target Start/End: Complemental strand, 22880753 - 22880655
Alignment:
Q  289 atgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    |||||| ||||||| ||||||||| ||||||| | |||||||||||||||||| |||||||  | |||||||| | |||  ||||||||||||||||||    
T  22880753 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctctt 22880655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 284 - 393
Target Start/End: Complemental strand, 31953130 - 31953021
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||||||||||| ||||||||| ||||||| |  |||||||||||| ||||||||||||| || ||| ||| | | || |||| |||||||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttc 31953031  T
Q  384 tcttgcatct 393  Q
    |||| |||||    
T  31953030 tctttcatct 31953021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 289 - 387
Target Start/End: Complemental strand, 28536581 - 28536485
Alignment:
Q  289 atgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    |||||| ||| ||| ||||||||| |||||||||  |||||||||||||||||||||||||   ||||| ||| | |||| ||||||||||||||||||    
T  28536581 atgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgaca--cggtcatgtggaccccacacaagcacactttctctt 28536485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 6209567 - 6209462
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| ||||||| ||||||||| |||||||  ||||||||| |||||||||||||| ||  | |||||||| | |||  || |||||||||    
T  6209567 aagagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacactt 6209468  T
Q  382 tctctt 387  Q
    ||||||    
T  6209467 tctctt 6209462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 15990144 - 15990039
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| ||| ||| ||||||||| ||||||| |  |||||||||||||||||||||||||| ||| ||  || | |||  ||||| ||||||    
T  15990144 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 15990045  T
Q  382 tctctt 387  Q
    ||||||    
T  15990044 tctctt 15990039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 30341462 - 30341357
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| ||| ||| ||||||||| ||||||| |  |||||||||||||||||||||||||| ||| ||  || | |||  ||||| ||||||    
T  30341462 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 30341363  T
Q  382 tctctt 387  Q
    ||||||    
T  30341362 tctctt 30341357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 387
Target Start/End: Original strand, 946383 - 946479
Alignment:
Q  291 gatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    |||| ||||||| |||||||||| |||||| | ||||||||| || ||||||||||||| || ||||||| ||||||   | |||||||||||||||    
T  946383 gatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcacgtaaatcccgctctagcacactttctctt 946479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 282 - 366
Target Start/End: Original strand, 15832575 - 15832659
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcc 366  Q
    |||||| |||||| ||||||| | ||||||||||||| | |||||||||||||||||||||| |||||  | |||||||| ||||    
T  15832575 aagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcc 15832659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 15508124 - 15508021
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    ||||||||||| ||| ||| ||||||||| ||||||| |  |||||||||||||||||||||||||| ||| ||  || | |||  ||||| ||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15508025  T
Q  384 tctt 387  Q
    ||||    
T  15508024 tctt 15508021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 29857827 - 29857930
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| | |||| || ||||||| | ||| ||||||||||||||||||||||  | || ||||| |||||  | ||||||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  384 tctt 387  Q
    ||||    
T  29857927 tctt 29857930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 31109488 - 31109435
Alignment:
Q  296 atagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgaca 349  Q
    ||||||| ||||||||| ||||||| | ||||||| ||||||||||||||||||    
T  31109488 atagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgaca 31109435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 394
Target Start/End: Original strand, 12732480 - 12732592
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    |||||| |||||| |||||||  |||| ||| ||||| ||   |||||||||||||||||||||||||  |||  | ||| |||||| | ||||||| ||    
T  12732480 aagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacattt 12732579  T
Q  382 tctcttgcatctc 394  Q
    |||||| ||||||    
T  12732580 tctctttcatctc 12732592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 31110861 - 31110796
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgaca 349  Q
    ||||||||||||| ||||||| ||||||||| ||||||| | |||||||  | |||||||||||||||    
T  31110861 aagagttatgatacatagacatccttaggtggcaatacaccctttgaca--ctcacaaaaatctgaca 31110796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 387
Target Start/End: Complemental strand, 10211 - 10106
Alignment:
Q  282 aagagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactt 381  Q
    ||||||||||||| ||||||| | ||||||| ||||||| | ||||||| ||||| ||||||||||||  | |||||||| | | | |||||||||||||    
T  10211 aagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacactt 10112  T
Q  382 tctctt 387  Q
    ||||||    
T  10111 tctctt 10106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 1029 - 926
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| | ||||||| ||||||| | ||| ||| ||||||||||| ||||||  | ||||||||||||||  ||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  384 tctt 387  Q
    ||||    
T  929 tctt 926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 1029 - 926
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| | ||||||| ||||||| | ||| ||| ||||||||||| ||||||  | ||||||||||||||  ||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  384 tctt 387  Q
    ||||    
T  929 tctt 926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 8963 - 8860
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    ||||||||||| ||||||| ||||| |||||||||||  |||||||| | |||||||||| |||||  | |||||||| | |||| ||||| ||| ||||    
T  8963 gagttatgatatatagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaagtacattttc 8864  T
Q  384 tctt 387  Q
    ||||    
T  8863 tctt 8860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 387
Target Start/End: Original strand, 4029 - 4132
Alignment:
Q  284 gagttatgatagatagacaaccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttc 383  Q
    |||| |||||| ||||||| | |||| || ||||||| | ||| ||||||||||||||||||||||  | || ||||| |||||  | ||||||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  384 tctt 387  Q
    ||||    
T  4129 tctt 4132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 304 - 387
Target Start/End: Original strand, 152518 - 152601
Alignment:
Q  304 ccttaggtgacaatacaacatttgacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    |||| |||| ||||||| |  |||||||||||||||||||||||||| ||||||  || |||||  ||||  ||||||||||||    
T  152518 ccttgggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctctt 152601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 387
Target Start/End: Original strand, 17097 - 17157
Alignment:
Q  327 gacacccacacaaaaatctgacatctggtcacgtgaatcccatacaagcacactttctctt 387  Q
    |||| ||||||||||||||||||| ||||||| || | |||  ||||||||| ||||||||    
T  17097 gacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctctt 17157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University