View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20634_high_39 (Length: 280)

Name: NF20634_high_39
Description: NF20634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20634_high_39
NF20634_high_39
[»] chr5 (15 HSPs)
chr5 (20-182)||(32463613-32463775)
chr5 (186-269)||(18033982-18034065)
chr5 (186-269)||(22512305-22512388)
chr5 (186-269)||(7617133-7617216)
chr5 (186-269)||(2614666-2614749)
chr5 (186-269)||(33801469-33801552)
chr5 (186-261)||(33855068-33855143)
chr5 (186-269)||(41334680-41334763)
chr5 (188-268)||(25915006-25915085)
chr5 (186-269)||(38470579-38470662)
chr5 (188-269)||(5256997-5257078)
chr5 (20-77)||(32457360-32457417)
chr5 (186-269)||(32473411-32473494)
chr5 (186-269)||(17208074-17208157)
chr5 (185-237)||(15409527-15409579)
[»] chr4 (37 HSPs)
chr4 (186-269)||(1771283-1771366)
chr4 (186-266)||(12496956-12497036)
chr4 (185-266)||(27550308-27550389)
chr4 (188-269)||(43514703-43514784)
chr4 (186-269)||(25051693-25051776)
chr4 (186-269)||(27864564-27864647)
chr4 (186-269)||(28982839-28982922)
chr4 (186-269)||(33703141-33703224)
chr4 (186-269)||(55966363-55966446)
chr4 (186-269)||(23035980-23036063)
chr4 (186-269)||(35017733-35017815)
chr4 (186-269)||(48463467-48463550)
chr4 (186-268)||(27316731-27316813)
chr4 (188-269)||(43949818-43949900)
chr4 (188-269)||(27893859-27893940)
chr4 (189-269)||(23204795-23204875)
chr4 (186-269)||(55272393-55272476)
chr4 (188-269)||(39631102-39631184)
chr4 (188-269)||(31680904-31680985)
chr4 (186-269)||(711960-712043)
chr4 (186-269)||(17619169-17619252)
chr4 (186-268)||(21687006-21687088)
chr4 (186-268)||(28988473-28988555)
chr4 (187-269)||(41878407-41878489)
chr4 (188-269)||(3756263-3756344)
chr4 (188-269)||(35037007-35037088)
chr4 (188-269)||(43735744-43735825)
chr4 (186-266)||(960890-960970)
chr4 (186-269)||(32728357-32728440)
chr4 (186-243)||(46827749-46827806)
chr4 (186-237)||(30189273-30189324)
chr4 (186-269)||(45490330-45490413)
chr4 (228-266)||(51512285-51512323)
chr4 (181-238)||(50526084-50526141)
chr4 (186-253)||(41847971-41848038)
chr4 (186-269)||(48435596-48435679)
chr4 (190-244)||(54473455-54473509)
[»] chr3 (24 HSPs)
chr3 (186-269)||(54246165-54246248)
chr3 (186-269)||(24688419-24688502)
chr3 (186-269)||(42100688-42100771)
chr3 (187-269)||(42394436-42394518)
chr3 (186-269)||(25413681-25413764)
chr3 (186-269)||(40808865-40808948)
chr3 (186-269)||(46941053-46941136)
chr3 (187-269)||(54237097-54237179)
chr3 (186-269)||(45126945-45127028)
chr3 (186-269)||(47191043-47191125)
chr3 (188-269)||(53581875-53581956)
chr3 (186-269)||(4190282-4190365)
chr3 (186-269)||(9434124-9434207)
chr3 (186-269)||(36150130-36150213)
chr3 (187-269)||(40480750-40480832)
chr3 (186-269)||(53273701-53273784)
chr3 (188-269)||(1078229-1078309)
chr3 (188-269)||(27748565-27748646)
chr3 (186-269)||(10457909-10457992)
chr3 (186-269)||(25996268-25996351)
chr3 (190-269)||(29558251-29558330)
chr3 (186-269)||(34791829-34791912)
chr3 (186-269)||(51757593-51757676)
chr3 (186-269)||(52627994-52628077)
[»] scaffold0157 (1 HSPs)
scaffold0157 (186-266)||(23441-23521)
[»] chr6 (18 HSPs)
chr6 (186-269)||(7273352-7273435)
chr6 (186-269)||(9698350-9698433)
chr6 (186-269)||(26670026-26670109)
chr6 (186-269)||(26466799-26466882)
chr6 (188-269)||(24204004-24204085)
chr6 (188-269)||(30735984-30736065)
chr6 (186-269)||(13743238-13743321)
chr6 (186-269)||(13748738-13748821)
chr6 (186-269)||(21279929-21280012)
chr6 (186-269)||(30014343-30014426)
chr6 (186-269)||(7292747-7292830)
chr6 (186-269)||(7367549-7367632)
chr6 (186-269)||(3213400-3213483)
chr6 (186-269)||(21293694-21293777)
chr6 (188-269)||(27441544-27441625)
chr6 (186-269)||(33242403-33242486)
chr6 (186-253)||(31109255-31109322)
chr6 (186-269)||(33253913-33253996)
[»] chr2 (30 HSPs)
chr2 (186-269)||(1750414-1750497)
chr2 (187-269)||(19047158-19047240)
chr2 (186-269)||(12302270-12302353)
chr2 (186-269)||(16096747-16096830)
chr2 (188-268)||(43490419-43490499)
chr2 (186-269)||(30838632-30838715)
chr2 (186-269)||(4764743-4764826)
chr2 (186-269)||(43335780-43335863)
chr2 (188-265)||(33229303-33229381)
chr2 (186-269)||(43114557-43114640)
chr2 (188-269)||(11825671-11825752)
chr2 (188-269)||(6518486-6518566)
chr2 (188-269)||(41281991-41282072)
chr2 (186-269)||(12415477-12415560)
chr2 (186-269)||(12427537-12427620)
chr2 (186-269)||(16803968-16804051)
chr2 (186-269)||(16843250-16843333)
chr2 (186-243)||(966877-966934)
chr2 (188-269)||(8896600-8896681)
chr2 (186-269)||(18491705-18491788)
chr2 (187-238)||(34817824-34817875)
chr2 (186-225)||(42849907-42849946)
chr2 (186-268)||(14285676-14285758)
chr2 (186-269)||(42026767-42026852)
chr2 (188-269)||(4299437-4299518)
chr2 (186-269)||(13780752-13780835)
chr2 (186-269)||(34895758-34895841)
chr2 (188-229)||(7070418-7070459)
chr2 (224-265)||(39149313-39149354)
chr2 (186-238)||(20700945-20700997)
[»] chr1 (26 HSPs)
chr1 (186-269)||(43571103-43571186)
chr1 (186-269)||(5489776-5489859)
chr1 (186-269)||(48498979-48499062)
chr1 (188-269)||(4401329-4401411)
chr1 (186-262)||(24769523-24769599)
chr1 (186-266)||(50448280-50448360)
chr1 (188-269)||(2497579-2497660)
chr1 (188-269)||(7447828-7447908)
chr1 (186-269)||(44112677-44112760)
chr1 (186-269)||(48119628-48119711)
chr1 (186-268)||(750323-750405)
chr1 (186-269)||(23989540-23989624)
chr1 (185-269)||(37814777-37814861)
chr1 (186-269)||(35003294-35003377)
chr1 (186-269)||(38113212-38113295)
chr1 (186-269)||(38335918-38336001)
chr1 (186-269)||(41065153-41065236)
chr1 (185-269)||(46168382-46168466)
chr1 (186-269)||(45427762-45427845)
chr1 (186-269)||(45639749-45639832)
chr1 (186-243)||(14427347-14427404)
chr1 (186-267)||(26585462-26585543)
chr1 (186-238)||(51898601-51898653)
chr1 (186-253)||(35000146-35000213)
chr1 (186-269)||(45705825-45705908)
chr1 (186-219)||(4888055-4888088)
[»] scaffold0038 (1 HSPs)
scaffold0038 (187-269)||(112656-112738)
[»] chr7 (31 HSPs)
chr7 (184-269)||(42972850-42972935)
chr7 (186-269)||(5015395-5015478)
chr7 (186-269)||(24001029-24001112)
chr7 (186-269)||(42538448-42538531)
chr7 (186-269)||(35069721-35069804)
chr7 (186-269)||(5810941-5811024)
chr7 (188-269)||(4638216-4638297)
chr7 (186-269)||(9216302-9216384)
chr7 (188-269)||(43343641-43343722)
chr7 (188-269)||(44326180-44326261)
chr7 (188-269)||(44416951-44417032)
chr7 (186-269)||(27535248-27535331)
chr7 (186-269)||(41861674-41861759)
chr7 (188-269)||(10573751-10573832)
chr7 (188-269)||(16180374-16180454)
chr7 (189-266)||(26898422-26898499)
chr7 (209-269)||(38160596-38160656)
chr7 (195-266)||(32029837-32029908)
chr7 (186-269)||(40236919-40237002)
chr7 (186-269)||(45326020-45326103)
chr7 (187-269)||(31408650-31408732)
chr7 (184-269)||(27393277-27393361)
chr7 (186-269)||(5194248-5194331)
chr7 (186-269)||(24280613-24280696)
chr7 (186-269)||(31513287-31513370)
chr7 (186-254)||(39998408-39998476)
chr7 (186-269)||(43317443-43317526)
chr7 (186-219)||(38160661-38160694)
chr7 (186-239)||(47279744-47279797)
chr7 (186-269)||(33384870-33384954)
chr7 (186-238)||(41423812-41423864)
[»] chr8 (24 HSPs)
chr8 (184-268)||(2165981-2166065)
chr8 (186-269)||(2546996-2547079)
chr8 (186-269)||(11582766-11582849)
chr8 (186-269)||(29705362-29705445)
chr8 (186-269)||(36743500-36743583)
chr8 (188-269)||(42295197-42295278)
chr8 (187-269)||(45397317-45397399)
chr8 (188-269)||(26125637-26125718)
chr8 (188-269)||(30912579-30912660)
chr8 (188-269)||(42699259-42699340)
chr8 (186-266)||(30660762-30660842)
chr8 (186-269)||(5754903-5754986)
chr8 (186-269)||(42197452-42197535)
chr8 (188-269)||(29800967-29801048)
chr8 (186-269)||(18066735-18066818)
chr8 (194-269)||(31384672-31384747)
chr8 (188-269)||(20148762-20148843)
chr8 (186-269)||(35181516-35181599)
chr8 (186-269)||(1375542-1375625)
chr8 (186-269)||(34304788-34304871)
chr8 (188-269)||(33630010-33630091)
chr8 (186-269)||(16603643-16603726)
chr8 (186-220)||(28977146-28977180)
chr8 (186-238)||(37038609-37038661)
[»] scaffold0119 (1 HSPs)
scaffold0119 (186-269)||(685-768)
[»] scaffold0187 (2 HSPs)
scaffold0187 (186-269)||(14205-14288)
scaffold0187 (186-269)||(24533-24616)
[»] scaffold0385 (1 HSPs)
scaffold0385 (186-269)||(11251-11334)
[»] scaffold0003 (1 HSPs)
scaffold0003 (188-269)||(45736-45817)
[»] scaffold0161 (1 HSPs)
scaffold0161 (20-80)||(23139-23199)
[»] scaffold0100 (1 HSPs)
scaffold0100 (186-269)||(35473-35556)


Alignment Details
Target: chr5 (Bit Score: 155; Significance: 2e-82; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 32463775 - 32463613
Alignment:
Q  20 gagtggggttagagatgttgaatttgcttggtttctggttaactggtccattgtatatgaatggttttttgttctggttagtacactctgcactgcactg 119  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  32463775 gagtggggttagagctgttgaatttgcttggtttctggttaactggtccattgtatatgaatggttttttgttctggttagtacactctgcactgcattg 32463676  T
Q  120 agtcgtcacatttaaatagtaatgagtgtaaccaacctgaagtaacattagtggtagatactc 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32463675 agtcgtcacatttaaatagtaatgagtgtaaccaacctgaagtaacattagtggtagatactc 32463613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 18033982 - 18034065
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  18033982 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatctcac 18034065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 22512305 - 22512388
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||    
T  22512305 ggaaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatctcac 22512388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 7617133 - 7617216
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||    
T  7617133 ggaaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagttcatctcac 7617216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 2614749 - 2614666
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  2614749 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 2614666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 33801469 - 33801552
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||| |||||||| |||||| ||||||||||| ||||||||||| |||||||| |||||||||||||||    
T  33801469 ggaaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagttcatctcac 33801552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 261
Target Start/End: Complemental strand, 33855143 - 33855068
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagtt 261  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  | ||||| |||||||    
T  33855143 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattaggaacattttggtaagtt 33855068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 41334763 - 41334680
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||| |||||  |||| ||||||| ||||||||| |||||||| |||||||||||||||    
T  41334763 ggaaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcac 41334680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 25915085 - 25915006
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctca 268  Q
    |||||||||||||||||||||||||||||||||  |||||||||||| |||||||||| ||||||| ||| ||||||||||    
T  25915085 aaaatgttacatgaacaccctttattcctacacctcattgtacacccaatgtattaga-atatttttgtaggttcatctca 25915006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 38470579 - 38470662
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||  |||||||| |||| ||||| ||||    
T  38470579 ggaaaatgttacataaacaccctttattcatacattccattgtacaccccatgtattaaggatattttggtaaattcatttcac 38470662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 5256997 - 5257078
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||| |||||| ||||||| ||||  ||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  5256997 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcac 5257078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 77
Target Start/End: Original strand, 32457360 - 32457417
Alignment:
Q  20 gagtggggttagagatgttgaatttgcttggtttctggttaactggtccattgtatat 77  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||    
T  32457360 gagtggggttagagccgttgaatttgcttggtttctggttaactggttcattgtatat 32457417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 32473494 - 32473411
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||| || |||||   |||||||||| |||| ||||| |||||||| |||| ||||||||||    
T  32473494 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaatttcatctcac 32473411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 17208074 - 17208157
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||| ||||||||||||| || ||||||  ||||||||||||||| ||||  || ||||| |||| ||||||||||    
T  17208074 ggaaaatgttacgtgaacaccctttaatcatacactttattgtacaccccatgcattaaggacattttggtaaattcatctcac 17208157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 15409527 - 15409579
Alignment:
Q  185 gggaaaatgttacatgaacaccctttattcctacactccattgtacaccccat 237  Q
    ||||||||||||||| ||||||||||||||  | || || |||||||||||||    
T  15409527 gggaaaatgttacataaacaccctttattcgcatacacccttgtacaccccat 15409579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 8e-33; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 1771366 - 1771283
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||    
T  1771366 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatctcac 1771283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 186 - 266
Target Start/End: Original strand, 12496956 - 12497036
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatct 266  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  12496956 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatct 12497036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 185 - 266
Target Start/End: Original strand, 27550308 - 27550389
Alignment:
Q  185 gggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatct 266  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||| ||||||||||||    
T  27550308 gggaaaatgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatct 27550389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 43514784 - 43514703
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| | |||||| |||||||||||||||    
T  43514784 aaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatctcac 43514703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 25051693 - 25051776
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  25051693 ggaaaatgtcacatgaacacactttattcctacaccccattgtacaccctatgtattagggatattttggtaagttcatctcac 25051776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 27864564 - 27864647
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||| |||||| ||||||| ||||  ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  27864564 ggaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcac 27864647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 28982922 - 28982839
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||| |||||| | |||||||| ||||| |||||| |||||||| |||||||||||||||    
T  28982922 ggaaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagttcatctcac 28982839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 33703141 - 33703224
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||| |||||    ||||||||||||||||||||| |||||||| |||||||||||||||    
T  33703141 ggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcac 33703224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 55966446 - 55966363
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||| |||||||||||||| ||||  |||||||||| |||||||||||| |||||||| |||||||||||||||    
T  55966446 ggaaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagttcatctcac 55966363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 23035980 - 23036063
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||  ||||||||||||||| | ||||||||||| || |||||| |||||||| |||||||||||||||    
T  23035980 ggaaaatgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatatttttgtaagttcatctcac 23036063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 35017733 - 35017815
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||||||| |   |||||||||||||||||| ||| |||||||| |||||||||||||||    
T  35017733 ggaaaatgttacatgaacaccctttattcctatatctcattgtacaccccatgta-tagggatattttggtaagttcatctcac 35017815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 48463550 - 48463467
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||| |||||| ||||||| |||| | ||||||||| |||||||||||| |||||||| |||||||||||||||    
T  48463550 ggaaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagttcatctcac 48463467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 186 - 268
Target Start/End: Complemental strand, 27316813 - 27316731
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctca 268  Q
    ||||||||||| | |||||||||||||||||||||  |||| ||||||||||||||||  |||||||| ||||||||||||||    
T  27316813 ggaaaatgttaaacgaacaccctttattcctacacctcattatacaccccatgtattaaggatattttggtaagttcatctca 27316731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 43949900 - 43949818
Alignment:
Q  188 aaaatgttacatgaacacccttt-attcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||| |||||||||||||||| |||||| |||  |||||||||||||||||||||| |||||||| |||||||||||||||    
T  43949900 aaaatgatacatgaacacccttttattcctgcacctcattgtacaccccatgtattagggatattttggtaagttcatctcac 43949818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 27893940 - 27893859
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||| |||||| ||||||| ||||  ||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  27893940 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcac 27893859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 189 - 269
Target Start/End: Complemental strand, 23204875 - 23204795
Alignment:
Q  189 aaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||| |||||||||||||  |||||||||| || ||||||||| |||||||| |||||||||| ||||    
T  23204875 aaatgttacatgaacactctttattcctacatcccattgtacatcctatgtattagggatatttttgtaagttcatgtcac 23204795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 55272476 - 55272393
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||| |||||| || ||||||| ||||||||||||||| ||||  |||||||| |||| ||||||||||    
T  55272476 ggaaaatgttacatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcac 55272393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 39631102 - 39631184
Alignment:
Q  188 aaaatgttacatgaacacccttt-attcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||| ||||||||| |||||| ||||||||||  ||||||||||| |||||||||| |||||||| |||||||||||||||    
T  39631102 aaaatgatacatgaacccccttttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 39631184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 31680904 - 31680985
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||| | |||||| ||||||| |||| ||||||||||||||| | |||||| |||||||| |||||||||||||||    
T  31680904 aaaatgttacgtaaacaccatttattcatacattccattgtacaccccgtatattagggatattttggtaagttcatctcac 31680985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 711960 - 712043
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||| || ||||| | ||||||||||| ||| ||||  |||||||| |||| ||||||||||    
T  711960 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaaattcatctcac 712043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 17619252 - 17619169
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||| |||| || ||||| | ||||||||||||||| ||||  |||||||| |||| ||||||||||    
T  17619252 ggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcac 17619169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 268
Target Start/End: Original strand, 21687006 - 21687088
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctca 268  Q
    ||||||||||||||||||| ||||||||  ||||| ||||| |||| |  |||||||||| ||||||| ||||||||||||||    
T  21687006 ggaaaatgttacatgaacatcctttatttttacaccccattatacatcttatgtattagaaatattttagtaagttcatctca 21687088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 268
Target Start/End: Original strand, 28988473 - 28988555
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctca 268  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||||||||| | ||| || |||||  ||| |||||||||    
T  28988473 ggaaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttgataaattcatctca 28988555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 41878407 - 41878489
Alignment:
Q  187 gaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||| |||||||| |||||  |||||||||||| ||  ||||| ||||||||  ||||||||||||||    
T  41878407 gaaaatgttacatgaacactctttattcatacacctcattgtacaccctatccattagggatattttgataagttcatctcac 41878489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 3756344 - 3756263
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||| || ||||| | ||||||||||||||| ||||  |||||||| |||| || |||||||    
T  3756344 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaaatttatctcac 3756263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 35037007 - 35037088
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||| |||||||||  | ||||||| ||||||||||||||| ||||  |||||||| |||| ||||||||||    
T  35037007 aaaatgttacatgagcaccctttaaccatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcac 35037088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 43735744 - 43735825
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||| ||||||||||| ||||||||||||||   |||| ||||  ||||||||||||||||||||  ||||||||||||||    
T  43735744 aaaatattacatgaacatcctttattcctacatctcattatacattccatgtattagagatattttgataagttcatctcac 43735825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 266
Target Start/End: Complemental strand, 960970 - 960890
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatct 266  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||| ||  ||||| || ||||| |||| |||||||    
T  960970 ggaaaatgttacatgaacaccctttaatcatacactctattgtacaccctatacattagggacattttggtaaattcatct 960890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 32728357 - 32728440
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||| |||||| || ||||| | ||||||||||||||| ||||  || ||||| |||| ||||||||||    
T  32728357 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattttagtaaattcatctcac 32728440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 46827806 - 46827749
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtatta 243  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||| ||| ||||    
T  46827806 ggaaaatgttacatgaacaccctttaatcatacactctattgtacacccaatgcatta 46827749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 30189273 - 30189324
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccat 237  Q
    ||||||||||||||||||||| |||||||  ||||||||| |||||||||||    
T  30189273 ggaaaatgttacatgaacaccatttattcacacactccatcgtacaccccat 30189324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 45490413 - 45490330
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||  ||||||  ||||  | |||||||||| |||||||||| |||| ||| |||| ||||||||||    
T  45490413 ggaaaatgttacatgaacacattttatttatacatccaattgtacacctcatgtattagggatactttagtaaattcatctcac 45490330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 266
Target Start/End: Complemental strand, 51512323 - 51512285
Alignment:
Q  228 tacaccccatgtattagagatattttcgtaagttcatct 266  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  51512323 tacaccccatgtattagagatattttggtaagttcatct 51512285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 50526084 - 50526141
Alignment:
Q  181 tcatgggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatg 238  Q
    |||| |||||||||||||| ||||||||||||| ||| || || ||||||||||||||    
T  50526084 tcataggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatg 50526141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 41847971 - 41848038
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatatttt 253  Q
    ||||||||||||| ||||| ||||| |||  ||||  |||||||||||||||| |||||||| |||||    
T  41847971 ggaaaatgttacaagaacatccttttttcacacacctcattgtacaccccatgcattagagacatttt 41848038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 48435679 - 48435596
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||| ||||||||||||||| |||| ||  |||| | ||||||||||||||| ||||| || || || |||| ||||||||||    
T  48435679 ggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcac 48435596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Original strand, 54473455 - 54473509
Alignment:
Q  190 aatgttacatgaacaccctttattcctacactccattgtacaccccatgtattag 244  Q
    |||| ||||||||||||||||||||| | || || |||||||| |||||||||||    
T  54473455 aatgatacatgaacaccctttattcccatacacccttgtacactccatgtattag 54473509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 8e-33; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 54246248 - 54246165
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||    
T  54246248 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagttcatctcac 54246165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 24688502 - 24688419
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  24688502 ggaaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagttcatctcac 24688419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 42100688 - 42100771
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| |||||||||||||||    
T  42100688 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcac 42100771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 42394518 - 42394436
Alignment:
Q  187 gaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  42394518 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 42394436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 25413681 - 25413764
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||| |||||||| |||||||||||||||    
T  25413681 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatctcac 25413764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 40808865 - 40808948
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  40808865 ggaaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagttcatctcac 40808948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 46941053 - 46941136
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| |||||||| |||||||||||||||    
T  46941053 ggaaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctcac 46941136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 54237097 - 54237179
Alignment:
Q  187 gaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  54237097 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 54237179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 45127028 - 45126945
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||| |||||||||||||| ||||  ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  45127028 ggaaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcac 45126945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 47191125 - 47191043
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||  ||||||||||||||    
T  47191125 ggaaaatgttacatgaacaccctttattcctacacctcattgtaca-cccatgtattagagatattttgataagttcatctcac 47191043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 53581956 - 53581875
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||| |||||||| |||||||||||||||| || ||||||||| ||||||||  ||||||||||||||    
T  53581956 aaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagttcatctcac 53581875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 4190365 - 4190282
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||| || ||||| | ||||||||||  |||||||||||||||||| |||| ||||||||||    
T  4190365 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaaattcatctcac 4190282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 9434124 - 9434207
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||||||| ||||| || ||||| |||| ||||||||||    
T  9434124 ggaaaatgttacatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcac 9434207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 36150130 - 36150213
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||| ||||||||||| ||||| ||||| ||||||| |||||| || |||||||| |||||||||||||||    
T  36150130 ggaaaatgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatattttggtaagttcatctcac 36150213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 40480750 - 40480832
Alignment:
Q  187 gaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||| ||  | |||||||||| || ||||||||| |||||||| |||||||||||||||    
T  40480750 gaaaatgttacatgaacaccctttattcatatgccccattgtacatcctatgtattagggatattttggtaagttcatctcac 40480832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 53273784 - 53273701
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||| ||||||| | |||||||||| ||  ||||||||| |||||||||||| |||||||| |||||||||||||||    
T  53273784 ggaaaatgttatatgaacatcatttattcctatacctcattgtacatcccatgtattagggatattttggtaagttcatctcac 53273701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 1078229 - 1078309
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||| |||  |||||||||||  ||||||||| |||||||| ||| |||||||||||    
T  1078229 aaaatgttacatgaacaccctttattcctgcacctcattgtacacctaatgtattag-gatatttttgtaggttcatctcac 1078309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 27748565 - 27748646
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||| ||||||| |||||  |||| ||||||  ||||||||| |||||||| |||||||||||||||    
T  27748565 aaaatgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatattttggtaagttcatctcac 27748646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 10457992 - 10457909
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||| |||| || ||||| | ||||||||||||||| ||||  |||||||| |||| || |||||||    
T  10457992 ggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaatttatctcac 10457909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 25996268 - 25996351
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||| || ||||    |||||||||||||| |||||  || ||||| |||| ||||||||||    
T  25996268 ggaaaatgttacatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaaattcatctcac 25996351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 29558330 - 29558251
Alignment:
Q  190 aatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||| ||||||||||||||||| ||||   |||||||||||| || ||||||  |||| || |||| ||||||||||    
T  29558330 aatgttatatgaacaccctttattcatacatctcattgtacaccctatatattaggaatatattggtaaattcatctcac 29558251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 34791829 - 34791912
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||| || |||||   |||||| ||| |||| ||||| || |||||  ||| ||||||||||    
T  34791829 ggaaaatgttacatgaacaccctttaatcatacaccatattgtaaacctcatgcattagggacattttaataatttcatctcac 34791912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 51757593 - 51757676
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||| |||||| ||||||||||| || ||||| | |||||||||| |||| ||||  || ||||| |||| ||||||||||    
T  51757593 ggaaaatattacataaacaccctttaatcatacaccctattgtacacctcatgcattatggacattttagtaatttcatctcac 51757676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 52628077 - 52627994
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||| ||||||||||||| || ||||  | |||||||||| |||| ||||   ||||||| |||| ||||||||||    
T  52628077 ggaaaatgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaaattcatctcac 52627994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 186 - 266
Target Start/End: Complemental strand, 23521 - 23441
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatct 266  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  23521 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatct 23441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 7273435 - 7273352
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||||||||||||||    
T  7273435 ggaaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatctcac 7273352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 9698433 - 9698350
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  9698433 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 9698350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 26670109 - 26670026
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| |||||||| |||||||||||||||    
T  26670109 ggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 26670026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 26466799 - 26466882
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| | |||||| |||||||||||||||    
T  26466799 ggaaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatctcac 26466882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 24204085 - 24204004
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||| ||||||||||| |||||||| |||||||||||||||    
T  24204085 aaaatgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatattttggtaagttcatctcac 24204004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 30735984 - 30736065
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||| |||||||||| |||||||| |||||||||||||||    
T  30735984 aaaatgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattttggtaagttcatctcac 30736065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 13743321 - 13743238
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||| ||||||| ||||  | ||||||||||||||||||||| |||||||| |||||||||||||||    
T  13743321 ggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcac 13743238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 13748821 - 13748738
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||| ||||||| ||||  | ||||||||||||||||||||| |||||||| |||||||||||||||    
T  13748821 ggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcac 13748738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 21279929 - 21280012
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||| ||||| ||||||| ||| |||||||||||| |||||||| |||| ||||||||||    
T  21279929 ggaaaatgttacatgaacaccctttatttctacattccattgcacatcccatgtattagggatattttggtaaattcatctcac 21280012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 30014343 - 30014426
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||| ||||||||||||  ||||||| |||||||||||||||    
T  30014343 ggaaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagttcatctcac 30014426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 7292747 - 7292830
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||| ||||||| ||||||| |||||  |||| ||||||| ||||||||| |||||||| |||||||||||||||    
T  7292747 ggaaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcac 7292830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 7367549 - 7367632
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||| ||||||| | ||||||| |||||  ||||||||| |||||||||||| |||||||| |||||||||||||||    
T  7367549 ggaaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagttcatctcac 7367632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 3213400 - 3213483
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||| |||||||||||||| ||||   |||||||||||||||||||||  |||||||| |||| ||||| ||||    
T  3213400 ggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcac 3213483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 21293777 - 21293694
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||| |||||||||||||| |||| | || ||||||||||||||||||  |||||||| |||| ||||| ||||    
T  21293777 ggaaaatgttacataaacaccctttattcatacatttcactgtacaccccatgtattaaggatattttggtaaattcatttcac 21293694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 27441544 - 27441625
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||| || ||||| | |||||||| || ||||||||  |||||||| |||| ||||||||||    
T  27441544 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcac 27441625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 33242403 - 33242486
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||| |||| || |||||   ||||||||||||||||||||  || ||||| |||| ||||||||||    
T  33242403 ggaaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaaattcatctcac 33242486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 31109322 - 31109255
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatatttt 253  Q
    |||||||||||||||||||||||||| || ||||  ||||| ||||||||||| | ||| ||||||||    
T  31109322 ggaaaatgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatatttt 31109255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 33253913 - 33253996
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||| |||| ||  |||| | ||||||||||||||| ||||| || || || |||| ||||||||||    
T  33253913 ggaaaatgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcac 33253996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 1750414 - 1750497
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  1750414 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcac 1750497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 19047158 - 19047240
Alignment:
Q  187 gaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  19047158 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 19047240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 12302353 - 12302270
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  12302353 ggaaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcac 12302270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 16096747 - 16096830
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||| || |||| |||||||    
T  16096747 ggaaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttggtgagttaatctcac 16096830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 188 - 268
Target Start/End: Complemental strand, 43490499 - 43490419
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctca 268  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| | ||||||||| |||||||| ||||||||||||||    
T  43490499 aaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatctca 43490419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 30838632 - 30838715
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||| |||||    ||||||||||||||||||||| |||||||| |||||||||||||||    
T  30838632 ggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcac 30838715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 4764826 - 4764743
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||| |||||| ||||||||||||| | |||||||||||||||||||| | ||||||| |||| ||||||||||    
T  4764826 ggaaaatgttacatcaacaccatttattcctacaccctattgtacaccccatgtattataaatattttggtaaattcatctcac 4764743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 43335863 - 43335780
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||| ||||||| | |||||||||||||  ||||||||| |||||||||||| |||||||| |||||||||||||||    
T  43335863 ggaaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagttcatctcac 43335780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 265
Target Start/End: Original strand, 33229303 - 33229381
Alignment:
Q  188 aaaatgttacatgaacacccttt-attcctacactccattgtacaccccatgtattagagatattttcgtaagttcatc 265  Q
    |||||| |||||||||||||||| ||||||||||  |||||||||||||||||||||| |||||||| |||||||||||    
T  33229303 aaaatgatacatgaacacccttttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatc 33229381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 43114557 - 43114640
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||| || ||||| | ||||||||||||||| ||||| || ||||| |||| ||||||||||    
T  43114557 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 43114640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 11825752 - 11825671
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||| || ||||| | ||||||||||||||| ||||| || ||||| |||| ||||||||||    
T  11825752 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 11825671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 6518566 - 6518486
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||| |||| || ||||||| ||||||||||||||| ||||| || ||||| |||| ||||||||||    
T  6518566 aaaatgttacatgaacacc-tttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcac 6518486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 41282072 - 41281991
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||| || ||||| | ||||||||||||||| ||||| || |||||  ||| ||||||||||    
T  41282072 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttgataatttcatctcac 41281991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 12415560 - 12415477
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||| || |||||   ||||||||||||||| ||||| || ||||| |||| || |||||||    
T  12415560 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcac 12415477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 12427620 - 12427537
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||| || |||||   ||||||||||||||| ||||| || ||||| |||| || |||||||    
T  12427620 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcac 12427537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 16803968 - 16804051
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||| || ||||| | |||||||| |||||| ||||| || |||||  ||| ||||||||||    
T  16803968 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcac 16804051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 16843250 - 16843333
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||| || ||||| | |||||||| |||||| ||||| || |||||  ||| ||||||||||    
T  16843250 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcac 16843333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 186 - 243
Target Start/End: Complemental strand, 966934 - 966877
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtatta 243  Q
    |||||||||||||||||||||||||| || ||||| | ||||||||||||||| ||||    
T  966934 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcatta 966877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 8896681 - 8896600
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||  ||| |||||||||||||| ||  | |||  ||||||| |||| ||||||||||    
T  8896681 aaaatgttacatgaacaccctttattcacacattccattgtacaccctatacaataggaatattttggtaaattcatctcac 8896600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 18491705 - 18491788
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||| || ||||| | |||||||||| |||| ||||   | ||||| |||| ||||||||||    
T  18491705 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaaattcatctcac 18491788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 238
Target Start/End: Complemental strand, 34817875 - 34817824
Alignment:
Q  187 gaaaatgttacatgaacaccctttattcctacactccattgtacaccccatg 238  Q
    ||||||||||||||||||||||||||||  ||||  ||||||||||||||||    
T  34817875 gaaaatgttacatgaacaccctttattcacacacctcattgtacaccccatg 34817824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 225
Target Start/End: Complemental strand, 42849946 - 42849907
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccat 225  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  42849946 ggaaaatgttacatgaacaccctttattcctacaccccat 42849907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 268
Target Start/End: Original strand, 14285676 - 14285758
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctca 268  Q
    ||||||| |||||  ||||||||||| || ||||| | ||||||||||| || ||||| ||||||||| |||| |||||||||    
T  14285676 ggaaaatattacacaaacaccctttaatcatacaccctattgtacaccctatatattaaagatattttggtaaattcatctca 14285758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 42026767 - 42026852
Alignment:
Q  186 ggaaaatgttacatgaacaccc--tttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||  ||||||| |||| ||||||||||| |||  | ||||| |||||||| | || ||||||||||    
T  42026767 ggaaaatgttacatgaacacccaatttattcatacattccattgtacatcccgcgcattagggatattttggcaaattcatctcac 42026852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 4299518 - 4299437
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||| |||||||||||||| || ||||| | ||||||||| ||||| ||||  || ||||| |||| ||||||||||    
T  4299518 aaaatgttatatgaacaccctttaatcatacaccctattgtacactccatgcattaatgacattttggtaaattcatctcac 4299437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 13780835 - 13780752
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||| |||||  |||||||  ||||  |||||||||||||||  ||||| ||||||||  ||| ||||||||||    
T  13780835 ggaaaatgttacatcaacacattttattcacacacctcattgtacaccccatacattagggatattttgataaattcatctcac 13780752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 34895841 - 34895758
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||| ||||||||||||||| |||| ||  |||| | ||||||||||||||| ||||| || || || |||| ||||||||||    
T  34895841 ggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcac 34895758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 7070418 - 7070459
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgta 229  Q
    ||||||||||||||||||||||||||| ||||  ||||||||    
T  7070418 aaaatgttacatgaacaccctttattcatacatcccattgta 7070459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 39149354 - 39149313
Alignment:
Q  224 attgtacaccccatgtattagagatattttcgtaagttcatc 265  Q
    |||||||| || |||||||||||||||||| |||||||||||    
T  39149354 attgtacatcctatgtattagagatattttggtaagttcatc 39149313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 20700997 - 20700945
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatg 238  Q
    ||||||||||||||  |||||||||||||| | || || ||||||||||||||    
T  20700997 ggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatg 20700945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 43571186 - 43571103
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| |||||||||||||||    
T  43571186 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcac 43571103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 5489776 - 5489859
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  5489776 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 5489859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 48499062 - 48498979
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||    
T  48499062 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcac 48498979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 4401329 - 4401411
Alignment:
Q  188 aaaatgttacatgaacacccttt-attcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  4401329 aaaatgatacatgaacactcttttattcctacacttcattgtacaccccatgtattagagatattttggtaagttcatctcac 4401411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 24769599 - 24769523
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttc 262  Q
    |||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  24769599 ggaaaatgtttcatgaacaccttttatttctacactccattgtacaccccatgtattagggatattttggtaagttc 24769523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 186 - 266
Target Start/End: Complemental strand, 50448360 - 50448280
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatct 266  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||| |||||||| ||||||||||||    
T  50448360 ggaaaatgttacatgaacactctttatttctacactccattgtacaccttatgtattagggatatttttgtaagttcatct 50448280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 2497660 - 2497579
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||| |||||| ||||||| |||| ||||||||||||||||| |||||  |||||||| |||||||||||||||    
T  2497660 aaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagttcatctcac 2497579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 7447828 - 7447908
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||| ||||||||||||||  |||||||||| ||||||||||| |||||||||  ||||||||||||||    
T  7447828 aaaatgttacatgaacatcctttattcctacatcccattgtaca-cccatgtattacagatattttgataagttcatctcac 7447908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 44112677 - 44112760
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||| || ||||| | ||||||||||||||| ||||| || ||||| |||| ||||||||||    
T  44112677 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 44112760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 48119628 - 48119711
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||| || ||||| | ||||||||||||||| ||||  |||||||| |||| ||||||||||    
T  48119628 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcac 48119711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 186 - 268
Target Start/End: Complemental strand, 750405 - 750323
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctca 268  Q
    |||||||||||| |||||||||||  ||||||||| |||||||||||||||||||| || ||||||||  ||| |||||||||    
T  750405 ggaaaatgttacgtgaacacccttatttcctacaccccattgtacaccccatgtatcagggatattttgataaattcatctca 750323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 23989624 - 23989540
Alignment:
Q  186 ggaaaatgttacatgaacaccc-tttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||| ||||||| ||||||| |||||| |||| ||||||||| |||||||| |||| || |||||||    
T  23989624 ggaaaatgttacatgaacacccttttattcatacactcaattgtataccctatgtattagggatattttggtaaatttatctcac 23989540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 37814777 - 37814861
Alignment:
Q  185 gggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||| |||||||||||||| ||||   |||||||||||||||||||||  |||||||| |||| ||||| ||||    
T  37814777 gggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcac 37814861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 35003294 - 35003377
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||| || ||||| | ||||||||||||||  ||||  |||||||| |||| ||||||||||    
T  35003294 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaaattcatctcac 35003377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 38113295 - 38113212
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||| |||||||||||||| || ||||| | ||||||||||||||| ||||  || ||||| |||| ||||||||||    
T  38113295 ggaaaatgttatatgaacaccctttaatcatacaccctattgtacaccccatgcattaatgacattttggtaaattcatctcac 38113212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 38335918 - 38336001
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||| || |||||   |||||||| |||||| ||||  |||||||| |||| ||||||||||    
T  38335918 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaaattcatctcac 38336001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 41065153 - 41065236
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||| || ||||| |  |||||||||||||| ||||| |  ||||| |||| ||||||||||    
T  41065153 ggaaaatgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaatttcatctcac 41065236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 46168382 - 46168466
Alignment:
Q  185 gggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||| || || |  | ||||||||||| ||| ||||  |||||||| |||| ||||||||||    
T  46168382 gggaaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaaattcatctcac 46168466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 45427845 - 45427762
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||| ||| |||| || ||||| | ||||||||| ||||| ||||| || ||||| |||| ||||||||||    
T  45427845 ggaaaatgttacatgaataccttttaatcatacaccctattgtacactccatgcattagggacattttggtaatttcatctcac 45427762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 45639832 - 45639749
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||| ||||| || ||||  | ||||||||||||||  ||||  |||||||| |||| ||||||||||    
T  45639832 ggaaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaaattcatctcac 45639749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 243
Target Start/End: Original strand, 14427347 - 14427404
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtatta 243  Q
    |||||||||||||||||||||||||| || ||||| | |||||||||| |||| ||||    
T  14427347 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcatta 14427404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 267
Target Start/End: Original strand, 26585462 - 26585543
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctc 267  Q
    ||||||||||| |||||||  ||||| || ||||||  ||||||||||||||| ||||  |||||||| |||| ||||||||    
T  26585462 ggaaaatgttagatgaacattctttaatcatacactatattgtacaccccatgcattaaggatattttagtaaattcatctc 26585543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Original strand, 51898601 - 51898653
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatg 238  Q
    |||||||||||||| ||||||||||||| ||| || || ||||||||||||||    
T  51898601 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatg 51898653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 35000213 - 35000146
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatatttt 253  Q
    ||||||||||||||||||||| |||| || ||||||| |||||| ||  |||||||||| || |||||    
T  35000213 ggaaaatgttacatgaacaccttttaatcatacactctattgtatacttcatgtattagggacatttt 35000146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 45705825 - 45705908
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||| |||||||||||||| || |||| || ||||||||| ||||| ||||  || |||||  ||| ||||||||||    
T  45705825 ggaaaatgttatatgaacaccctttaatcatacattctattgtacactccatgcattatggacattttgataaattcatctcac 45705908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 219
Target Start/End: Original strand, 4888055 - 4888088
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctaca 219  Q
    |||||||||||||||||| |||||||||||||||    
T  4888055 ggaaaatgttacatgaacgccctttattcctaca 4888088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 112656 - 112738
Alignment:
Q  187 gaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  112656 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 112738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 3e-29; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 184 - 269
Target Start/End: Original strand, 42972850 - 42972935
Alignment:
Q  184 tgggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||    
T  42972850 tgggaaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagttcatctcac 42972935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 5015395 - 5015478
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||    
T  5015395 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcac 5015478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 24001112 - 24001029
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  24001112 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 24001029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 42538531 - 42538448
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  42538531 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 42538448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 35069721 - 35069804
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||||| |||||||||| |||||||| |||||||||||||||    
T  35069721 ggaaaatgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 35069804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 5811024 - 5810941
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||| || |||||| ||||||||  ||||||||||||||    
T  5811024 ggaaaatgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatattttgataagttcatctcac 5810941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 4638297 - 4638216
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||||||||| |||||  |||||||| |||||||||||||||    
T  4638297 aaaatgttacatgaacaccttttattcatacactcaattgtacaccccatatattatggatattttggtaagttcatctcac 4638216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 9216302 - 9216384
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||||||| |  | |||||||| |||||| |||||||||||||| |||||||||||||||    
T  9216302 ggaaaatgttacatgaacaccctttattcctatatcctattgtaca-cccatgcattagagatattttggtaagttcatctcac 9216384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 43343722 - 43343641
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||| | |||||| |||||| | ||||||||||||||||||||| ||||||||  ||||||||||||||    
T  43343722 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcac 43343641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 44326180 - 44326261
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||| |||||||||||||| ||||  |||||||||||| ||| |||||| |||||||| |||||||||||||||    
T  44326180 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcac 44326261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 44417032 - 44416951
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||| | |||||| |||||| | ||||||||||||||||||||| ||||||||  ||||||||||||||    
T  44417032 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcac 44416951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 27535331 - 27535248
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||| |||||| ||| ||| ||||| |||| ||||||||||    
T  27535331 ggaaaatgttacatgaacaccctttaatcatacactctattgtacactccatgtgttaaagacattttggtaatttcatctcac 27535248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 41861674 - 41861759
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtat--tagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||| ||||| | ||| ||||||| ||||||  |||||||||||| ||||||| |||||||    
T  41861674 ggaaaatgttacatgaacaccctttattcatacacccaattatacaccctatgtattatagagatattttggtaagtttatctcac 41861759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 10573751 - 10573832
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||| |||||||||||||| ||||  | |||||||||||||||||||||  ||||||| |||| ||||||||||    
T  10573751 aaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaaattcatctcac 10573832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 16180454 - 16180374
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||||||| |||||| | ||||||| |||| ||||||||||    
T  16180454 aaaatgttacatcaacaccatttattcctacac-ccattgtacaccccacgtattataaatattttggtaaattcatctcac 16180374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 266
Target Start/End: Complemental strand, 26898499 - 26898422
Alignment:
Q  189 aaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatct 266  Q
    |||||||||||||||||| ||||||| ||||| | ||||||||  ||||||||||| |||||||| ||||||||||||    
T  26898499 aaatgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatattttggtaagttcatct 26898422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 209 - 269
Target Start/End: Complemental strand, 38160656 - 38160596
Alignment:
Q  209 ttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||| ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  38160656 ttattcttacactccattgtacaccccatgtattagggatattttagtaacttcatctcac 38160596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 266
Target Start/End: Complemental strand, 32029908 - 32029837
Alignment:
Q  195 tacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatct 266  Q
    ||||| |||||  ||||||||||||| ||||||||||||||||||||||| |||||||| |||| |||||||    
T  32029908 tacataaacactttttattcctacaccccattgtacaccccatgtattagggatattttggtaaattcatct 32029837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 40236919 - 40237002
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||| || ||||  | ||||||||||||||| ||||| || ||||| |||| ||||||||||    
T  40236919 ggaaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaatttcatctcac 40237002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 45326020 - 45326103
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||| |||||||| |||||| ||||||| ||||   ||||||||||||||| |||||| |||||||| |||||||||||||||    
T  45326020 ggaaagtgttacataaacaccttttattcatacatcacattgtacaccccatatattagggatattttggtaagttcatctcac 45326103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 269
Target Start/End: Complemental strand, 31408732 - 31408650
Alignment:
Q  187 gaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||| || ||||||| |||||||| |||||| ||||  |||||||| |||| ||||| ||||    
T  31408732 gaaaatgttacatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattttggtaaattcatttcac 31408650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 184 - 269
Target Start/End: Complemental strand, 27393361 - 27393277
Alignment:
Q  184 tgggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||| ||||| | |||||||||||||||||  | ||||||||| | ||||||||| |||||||| |||||||||||||||    
T  27393361 tgggaaaatgctacatca-caccctttattcctacatcctattgtacactctatgtattagggatatttttgtaagttcatctcac 27393277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 5194331 - 5194248
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||| ||||||| |||||  |||||||||||| |||| |||  ||||||||  ||| ||||||||||    
T  5194331 ggaaaatgttacatgaacaccatttattcatacacctcattgtacaccctatgttttaaggatattttgataaattcatctcac 5194248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 24280696 - 24280613
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||| |||||||||||||||| ||||| | ||| |||| |||||| | |||| ||||||| |||| ||||||||||    
T  24280696 ggaaaatgttacgtgaacaccctttattcatacaccctattctacatcccatgcactagaaatattttggtaaattcatctcac 24280613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 31513287 - 31513370
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||| ||||| || ||||| | |||||| |||||||| ||||  |||||||| |||| ||||||||||    
T  31513287 ggaaaatgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaaattcatctcac 31513370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 254
Target Start/End: Original strand, 39998408 - 39998476
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttc 254  Q
    ||||||||||||||||||||  |||| || ||||  | ||||||||||||||||||||| |||||||||    
T  39998408 ggaaaatgttacatgaacacattttaatcatacatcctattgtacaccccatgtattagggatattttc 39998476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 43317443 - 43317526
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||| ||||||| |||||  ||||||||| || |||  |||| ||||||||  ||| ||||||||||    
T  43317443 ggaaaatgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattttgataaattcatctcac 43317526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 219
Target Start/End: Complemental strand, 38160694 - 38160661
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctaca 219  Q
    ||||||||||||||||||||||||||||||||||    
T  38160694 ggaaaatgttacatgaacaccctttattcctaca 38160661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 239
Target Start/End: Complemental strand, 47279797 - 47279744
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgt 239  Q
    ||||||| |||||| || ||||||||||| ||||  ||||||||||||||||||    
T  47279797 ggaaaatattacataaataccctttattcatacatcccattgtacaccccatgt 47279744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 33384870 - 33384954
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactcc-attgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||| | |||| || ||||| || |||||| || ||||| ||||| || ||||| |||| ||||||||||    
T  33384870 ggaaaatgttacatgaacatcatttaatcatacacccctattgtatactccatgcattagggacattttggtaaattcatctcac 33384954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 41423864 - 41423812
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatg 238  Q
    |||||||||||||| ||||||||||||||  | || || ||||||||||||||    
T  41423864 ggaaaatgttacataaacaccctttattctcatacacctttgtacaccccatg 41423812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 2166065 - 2165981
Alignment:
Q  184 tgggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctca 268  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||    
T  2166065 tgggaaaatattacatgaacaccatttattcctacaccccattgtataccccatgtattagagatattttggtaagttcatctca 2165981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 2546996 - 2547079
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||    
T  2546996 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttagtaagttcatctcac 2547079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 11582766 - 11582849
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  11582766 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 11582849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 29705362 - 29705445
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||  ||||||||||||||    
T  29705362 ggaaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagttcatctcac 29705445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 36743583 - 36743500
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  36743583 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 36743500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 42295197 - 42295278
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||||||||  |||||||||| ||||||||||| |||||||| |||||||||||||||    
T  42295197 aaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatctcac 42295278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 187 - 269
Target Start/End: Original strand, 45397317 - 45397399
Alignment:
Q  187 gaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||| |||||||||||||||||||||| ||||| ||||||| ||||||||| |||||||| |||||||||||||||    
T  45397317 gaaaatgttacgtgaacaccctttattcctacaccccattctacaccctatgtattagggatatttttgtaagttcatctcac 45397399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 26125637 - 26125718
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||| |||||||||||||| |||| |||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  26125637 aaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 26125718  T

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Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 30912660 - 30912579
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  |||||||||| | |||||| |||||||||||||||    
T  30912660 aaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagttcatctcac 30912579  T

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Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 42699259 - 42699340
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||  |||||||| |||||||||||||||    
T  42699259 aaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagttcatctcac 42699340  T

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Target: chr8; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 186 - 266
Target Start/End: Complemental strand, 30660842 - 30660762
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatct 266  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||||| ||||||||| |||||||| ||||||||||||    
T  30660842 ggaaaatgttacatgaacaccctttatttctacatcccattgtacaccctatgtattagggatattttggtaagttcatct 30660762  T

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Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 5754903 - 5754986
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||| ||||| |||||| |||||||| |||||||||||||||    
T  5754903 ggaaaatgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatattttggtaagttcatctcac 5754986  T

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Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 42197535 - 42197452
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||| ||||||||||||| |||||| |||| | ||||||||| |||||||| |||||||||||||||    
T  42197535 ggaaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagttcatctcac 42197452  T

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Target: chr8; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 29801048 - 29800967
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||| |||||| ||||||| ||||  ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  29801048 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcac 29800967  T

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Target: chr8; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 18066818 - 18066735
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||| || |||| || |||||||| |||||||||||| |||||||| |||| ||||||||||    
T  18066818 ggaaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaatttcatctcac 18066735  T

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Target: chr8; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 194 - 269
Target Start/End: Original strand, 31384672 - 31384747
Alignment:
Q  194 ttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||||| |||| || |||||||||||||||||||||  ||||||| |||||||||||||||    
T  31384672 ttacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattttggtaagttcatctcac 31384747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 269
Target Start/End: Original strand, 20148762 - 20148843
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||| |||||||||||||| ||||  |||||||||||| ||| |||||| |||||||| |||||||||||||||    
T  20148762 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcac 20148843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 35181516 - 35181599
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||| || ||||| | ||||||||||||||| ||||| || ||||| |||| ||||||||||    
T  35181516 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 35181599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 1375542 - 1375625
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||| ||||||||||||| ||||||| ||||| | |||||||||||||| |||||| |||||||| |||| || |||||||    
T  1375542 ggaaaattttacatgaacaccttttattcatacacccaattgtacaccccatatattagggatattttggtaaatttatctcac 1375625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 34304788 - 34304871
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||||||| |||||| || ||||| | ||||||||||||||| ||||| || ||||| |||| ||||||||||    
T  34304788 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 34304871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 33630091 - 33630010
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||| |||||||||||| || |||||  |||||||||||| ||| ||||| || ||||| |||| ||||||||||    
T  33630091 aaaatgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattagggacattttagtaatttcatctcac 33630010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 16603726 - 16603643
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||||||||| |||||||||| || |||||   ||| ||||||||||| |||| ||| ||||| |||| ||||||||||    
T  16603726 ggaaaatgttacatgcacaccctttaatcatacaccttattatacaccccatgcattaaagacattttggtaaattcatctcac 16603643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 220
Target Start/End: Original strand, 28977146 - 28977180
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacac 220  Q
    |||||||||||||||||||||||||||||||||||    
T  28977146 ggaaaatgttacatgaacaccctttattcctacac 28977180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 37038661 - 37038609
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatg 238  Q
    |||||||||||||| ||||||||||||| ||| || || ||||||||||||||    
T  37038661 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatg 37038609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 685 - 768
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| |||||||| |||||||||||||||    
T  685 ggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 14288 - 14205
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||||| |||||||| |||||||||||||||    
T  14288 ggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcac 14205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 24616 - 24533
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||||| |||||||| |||||||||||||||    
T  24616 ggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcac 24533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 186 - 269
Target Start/End: Original strand, 11251 - 11334
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    ||||||||| |||||||||| |||||||| ||||| |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  11251 ggaaaatgtcacatgaacacactttattcatacaccccattgtacaccccatatattagggatattttggtaagttcatctcac 11334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 45817 - 45736
Alignment:
Q  188 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||||||||||||| || ||||| | |||||||| || ||||||||  |||||||| |||| ||||||||||    
T  45817 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcac 45736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 23199 - 23139
Alignment:
Q  20 gagtggggttagagatgttgaatttgcttggtttctggttaactggtccattgtatatgaa 80  Q
    |||||||||||||| ||| || ||||||||||||||||||| ||||| |||||||||||||    
T  23199 gagtggggttagaggtgtcgagtttgcttggtttctggttatctggttcattgtatatgaa 23139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 269
Target Start/End: Complemental strand, 35556 - 35473
Alignment:
Q  186 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 269  Q
    |||||||||||||| |||||| |||| || |||||   ||||||||||||||| ||||| || || || |||| ||||||||||    
T  35556 ggaaaatgttacataaacaccatttaatcatacaccatattgtacaccccatgcattagggacatattggtaaattcatctcac 35473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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