View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20634_high_55 (Length: 226)
Name: NF20634_high_55
Description: NF20634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20634_high_55 |
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Alignment Details
Target: chr7 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 3 - 190
Target Start/End: Original strand, 47201946 - 47202133
Alignment:
| Q |
3 |
atcacgtggttggtgttcgttcagcgtgaagtgaaactatgtactaaaacagaacataaaaggagcgatatgagcgaaaatgaaggcaacaaatacaatt |
102 |
Q |
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| T |
47201946 |
atcacgtggttggtgttcgttcagcgtgaagtgaaactatgtactaaaacagaacataaaaggagcgatatgagcgaaaatgaaggcaacaaatacaatt |
47202045 |
T |
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| Q |
103 |
agaaaaccgtggtgtgtttgttcacagaacacacaataattgacgtgcattaaaatcagacaattatcctccctcatcaaccaatcac |
190 |
Q |
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| T |
47202046 |
agaaaaccgtggtgtgtttgttcacagaacacacaataattgacgtgcattaaaatcagacaattatcctccttcatcaaccaatcac |
47202133 |
T |
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