View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20634_low_41 (Length: 273)
Name: NF20634_low_41
Description: NF20634
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20634_low_41 |
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Alignment Details
Target: chr6 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 87 - 256
Target Start/End: Complemental strand, 34000971 - 34000802
Alignment:
| Q |
87 |
agatccagatcagtgcatgcaattaaatatattaatggagtattttttatcttgtttgatggtatatctaattgtaacatcatttgaaatctaataagag |
186 |
Q |
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| T |
34000971 |
agatcccgatcagtgcatgcaattaaatatattaatggagtattttttatcttgtttgatggtatatctaattgtaacatcatttgaaatctaataagat |
34000872 |
T |
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| Q |
187 |
gttatatttaaagataatgtgttaaactataactcaaagtatttttcttaacagtataactcgaagtatt |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34000871 |
gttatatttaaagataatgtgttaaactataactcaaagtatttttcttaacagtataactcgaagtatt |
34000802 |
T |
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