View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20637_low_9 (Length: 218)
Name: NF20637_low_9
Description: NF20637
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20637_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 8554973 - 8555161
Alignment:
| Q |
19 |
agactatagctagcaacacactttctgacactttctttccgaccttttctcttcgtataacctaaagatcacacttctcaatctctcttcccaaaagatg |
118 |
Q |
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| T |
8554973 |
agactataactagcaacacactttctgacactttctttccgaccttttctcttcgtataacctaaagatcacacttctcaatctctcttcccaaaagatg |
8555072 |
T |
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| Q |
119 |
aaaccttgaagctactcaatatgcataggctgccagcccagttggaatatatggactcttaatttccattatgtatttttcttcccttt |
207 |
Q |
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| T |
8555073 |
aaaccttgaagctactcaatatggataggctgccagcccagttggaatatatggactcttaatttccattatgtatttttcttcccttt |
8555161 |
T |
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