View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20639_low_6 (Length: 418)
Name: NF20639_low_6
Description: NF20639
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20639_low_6 |
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Alignment Details
Target: chr6 (Bit Score: 341; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 10 - 402
Target Start/End: Original strand, 34561106 - 34561497
Alignment:
| Q |
10 |
aagaatatcatggatcccacaatgatgttggaaaaatatttggtaaatgatggcattttgggtgaatgccatggcggagatgtacgacggtgaagatgta |
109 |
Q |
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| T |
34561106 |
aagaaaatcatggatcccacaatgatgttggaaaaatatttggtaaatgatggcattttgggtgaatgccatggcagagatgtacgacggtgaagatgta |
34561205 |
T |
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| Q |
110 |
tctataaacattctgactatcaaatcagtttaatagttgaatcccttaaaaggtctacaataagagatatattcataggtgacaatgtgagacaaatatg |
209 |
Q |
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| T |
34561206 |
tctataaacattatgacgatcaaatcagtttaatagttgaatctcttaaaaggtctacaataagagagatatttataggtgacaatgtgagacaattatg |
34561305 |
T |
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| Q |
210 |
gccttaaagaagggtattgggattttccatcccaaaagtctactccgaaatagtttttcctaggcgtttaaaattaaggacaaaattttgatggcaactt |
309 |
Q |
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| T |
34561306 |
gccttaaagaagggtattgggattttccatcccaaaagtctactccgaaatagtttttcccaggcgtttaaaattaaggacaaaattttgatggcaactt |
34561405 |
T |
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| Q |
310 |
acacaattcaaaatggtcactaccttagaaaagtggttggacaaacttgaagttggaatattgacatcatatataaaaatcatcaatggtcta |
402 |
Q |
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| T |
34561406 |
gcacaattcaaaacggtcactaccttagaaaagtggttggacaaacttgaagttgg-atattgacatcatatataaaaatcatcaatggtcta |
34561497 |
T |
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