View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2063_high_7 (Length: 365)
Name: NF2063_high_7
Description: NF2063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2063_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 15 - 351
Target Start/End: Original strand, 44531365 - 44531701
Alignment:
| Q |
15 |
aaatataataaaaagatggttgcaatggatttgtgataagtggtgttgttacctgttttgtggcattaacatttggaagagaacctaacaaaagaacact |
114 |
Q |
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| T |
44531365 |
aaatataataaaaagatggttgcaatggatttgtgataagtggtgttgttacctgttttgtggcattaacatttggaagagaacctaacaaaagaacact |
44531464 |
T |
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| Q |
115 |
ttgttttgtgtcatccattgaggttaaacaataagagaatttttgttcttttaattgagaaaccaaagataaaggtccacgtcctaatccaaccaaccct |
214 |
Q |
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| T |
44531465 |
ttgttttgtgtcatccattgaggttaaacaataagagaattcttgttcttgtaattgagaaaccaaagataaaggaccacgtcctaatccaaccaaccct |
44531564 |
T |
|
| Q |
215 |
gaagcttgttcaaacccttttccttcattgtcttcaccacaaccaaaaccaatgtttttaactgaaacttggnnnnnnnnatcatcaccaaaagtgaatg |
314 |
Q |
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| T |
44531565 |
gaagcttgttcaaacccttttccttcattgtcttcaccacaaccaaaaccaatgtttttaactgaaacttggttttttttatcatcaccaaaagtgaatg |
44531664 |
T |
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| Q |
315 |
tttcactacctaaaataccttgtgtcatagaataatc |
351 |
Q |
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| T |
44531665 |
tttcactacctaaaataccttgtgtcatagaataatc |
44531701 |
T |
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