View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2063_low_11 (Length: 306)
Name: NF2063_low_11
Description: NF2063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2063_low_11 |
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Alignment Details
Target: chr4 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 290
Target Start/End: Original strand, 40060695 - 40060984
Alignment:
| Q |
1 |
ataatggactactacaaattaagaagggggcaattacatgaattatattggaaggaacataattaaaggaagatttatttatgggagtgagggagtaatt |
100 |
Q |
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| T |
40060695 |
ataatggactactacaaattaagaagggggcaattacatgaattatattggaaggaacataattaaaggaagatttatttatgggagtgagggactaatt |
40060794 |
T |
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| Q |
101 |
aagtgagttcaagttccaaattctgcaatgctttgtaatgctggcctccattggccactaccaccaacaatatgtcttccaacacttctgttggtgcttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40060795 |
aagtgagttcaagttccaaattctgcaatgctttgtaatgctggcctccattggccactaccaccaacaatatgtcttccaacacttctgttggtgcttc |
40060894 |
T |
|
| Q |
201 |
tgctgccattgctctccgttcgttgagtctcccgttccacctgacacatcacaaaaataaaagatgaataaaggcactgcatagaatagg |
290 |
Q |
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| T |
40060895 |
tgctgccattgctctccgttcgttgagtctcccgttccacctgacacatcacaaaaataaaagatgaataaaggcactgcatagaatagg |
40060984 |
T |
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