View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2063_low_6 (Length: 396)

Name: NF2063_low_6
Description: NF2063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2063_low_6
NF2063_low_6
[»] chr1 (51 HSPs)
chr1 (171-386)||(43059932-43060146)
chr1 (1-99)||(43059769-43059867)
chr1 (175-319)||(25652741-25652885)
chr1 (175-344)||(11436045-11436213)
chr1 (175-344)||(36613834-36614002)
chr1 (216-352)||(11437170-11437305)
chr1 (195-344)||(39222423-39222572)
chr1 (194-353)||(51685714-51685872)
chr1 (203-352)||(24422795-24422943)
chr1 (211-349)||(43058784-43058920)
chr1 (216-353)||(45149941-45150077)
chr1 (175-349)||(50680330-50680502)
chr1 (216-351)||(35595163-35595298)
chr1 (216-344)||(51684369-51684496)
chr1 (182-348)||(39153054-39153218)
chr1 (195-348)||(24426025-24426177)
chr1 (175-348)||(37526808-37526979)
chr1 (216-344)||(45157180-45157306)
chr1 (175-344)||(36612856-36613023)
chr1 (208-314)||(30249453-30249559)
chr1 (203-344)||(52274971-52275111)
chr1 (182-351)||(39151927-39152094)
chr1 (216-344)||(39699738-39699864)
chr1 (216-352)||(52828041-52828176)
chr1 (234-350)||(23980455-23980570)
chr1 (216-348)||(43378684-43378814)
chr1 (230-344)||(33088602-33088715)
chr1 (214-344)||(35594220-35594347)
chr1 (216-314)||(44404474-44404572)
chr1 (216-314)||(45148613-45148710)
chr1 (175-248)||(39221412-39221485)
chr1 (216-344)||(52827350-52827477)
chr1 (195-324)||(14999906-15000033)
chr1 (216-344)||(39698566-39698692)
chr1 (175-344)||(50681538-50681702)
chr1 (216-349)||(14999283-14999411)
chr1 (195-349)||(52276113-52276266)
chr1 (219-314)||(33088099-33088194)
chr1 (216-319)||(40384752-40384855)
chr1 (216-311)||(44411937-44412032)
chr1 (214-288)||(31194111-31194185)
chr1 (216-353)||(41364823-41364958)
chr1 (269-349)||(7674526-7674603)
chr1 (216-295)||(46066574-46066652)
chr1 (215-349)||(35066972-35067105)
chr1 (236-314)||(7675450-7675528)
chr1 (214-288)||(30248170-30248243)
chr1 (216-314)||(45156081-45156179)
chr1 (270-314)||(16290126-16290170)
chr1 (228-344)||(41366114-41366228)
chr1 (216-319)||(43377747-43377850)
[»] chr8 (41 HSPs)
chr8 (175-342)||(1824008-1824174)
chr8 (175-342)||(1858453-1858619)
chr8 (175-344)||(10006347-10006515)
chr8 (217-344)||(22220391-22220517)
chr8 (175-349)||(10007693-10007866)
chr8 (200-349)||(5513980-5514127)
chr8 (216-353)||(24122877-24123012)
chr8 (192-344)||(1823555-1823707)
chr8 (192-344)||(1858000-1858152)
chr8 (194-319)||(23169940-23170073)
chr8 (216-348)||(30570227-30570357)
chr8 (222-314)||(32207302-32207394)
chr8 (216-348)||(40471118-40471248)
chr8 (216-319)||(43661292-43661395)
chr8 (216-282)||(2379895-2379961)
chr8 (216-344)||(18979091-18979218)
chr8 (216-352)||(30568882-30569016)
chr8 (214-344)||(22221333-22221462)
chr8 (214-344)||(22227675-22227804)
chr8 (216-314)||(24123869-24123967)
chr8 (216-314)||(43661794-43661892)
chr8 (216-346)||(29968308-29968436)
chr8 (216-349)||(8389660-8389792)
chr8 (196-276)||(11456679-11456759)
chr8 (216-352)||(18978015-18978149)
chr8 (216-344)||(30335642-30335769)
chr8 (216-344)||(8388467-8388592)
chr8 (216-324)||(2378883-2378990)
chr8 (216-352)||(18970906-18971040)
chr8 (216-291)||(30336472-30336547)
chr8 (255-353)||(12351915-12352012)
chr8 (182-320)||(18488200-18488337)
chr8 (216-344)||(11287779-11287906)
chr8 (216-344)||(12353332-12353457)
chr8 (1-48)||(10007380-10007427)
chr8 (216-287)||(24359866-24359937)
chr8 (216-349)||(11282006-11282138)
chr8 (206-286)||(34625161-34625241)
chr8 (201-319)||(5514236-5514344)
chr8 (216-303)||(29043441-29043528)
chr8 (266-342)||(45114537-45114612)
[»] chr7 (36 HSPs)
chr7 (175-350)||(7501782-7501956)
chr7 (175-344)||(18371427-18371595)
chr7 (175-344)||(7500458-7500625)
chr7 (175-349)||(22629481-22629657)
chr7 (208-319)||(18372420-18372531)
chr7 (175-314)||(47369813-47369952)
chr7 (216-349)||(42886257-42886389)
chr7 (208-350)||(22630415-22630556)
chr7 (216-344)||(31659625-31659753)
chr7 (216-313)||(14999126-14999223)
chr7 (216-351)||(31949318-31949452)
chr7 (216-350)||(127334-127465)
chr7 (216-350)||(3227565-3227698)
chr7 (216-344)||(3227111-3227237)
chr7 (216-344)||(17781664-17781791)
chr7 (195-319)||(46482624-46482748)
chr7 (182-344)||(47525304-47525465)
chr7 (218-287)||(21505473-21505542)
chr7 (1-48)||(7500892-7500939)
chr7 (219-278)||(14998048-14998107)
chr7 (255-349)||(17782563-17782656)
chr7 (216-349)||(31949773-31949905)
chr7 (201-348)||(43900445-43900589)
chr7 (255-314)||(48933699-48933758)
chr7 (182-327)||(6618227-6618371)
chr7 (255-353)||(34352796-34352893)
chr7 (216-344)||(769416-769543)
chr7 (208-352)||(30439321-30439463)
chr7 (270-344)||(31661034-31661107)
chr7 (208-314)||(43899478-43899584)
chr7 (256-348)||(128612-128703)
chr7 (272-340)||(47524532-47524599)
chr7 (216-275)||(770732-770791)
chr7 (214-276)||(21508402-21508464)
chr7 (288-350)||(46483551-46483611)
chr7 (175-231)||(46483476-46483532)
[»] chr4 (46 HSPs)
chr4 (175-345)||(12129625-12129794)
chr4 (216-344)||(31600956-31601083)
chr4 (216-344)||(1834122-1834250)
chr4 (175-352)||(8155733-8155908)
chr4 (175-350)||(1290128-1290302)
chr4 (216-342)||(31599794-31599919)
chr4 (214-349)||(1835071-1835205)
chr4 (217-348)||(8758809-8758939)
chr4 (182-349)||(13386012-13386180)
chr4 (216-352)||(1289092-1289227)
chr4 (182-350)||(25685759-25685926)
chr4 (182-349)||(17388148-17388313)
chr4 (228-350)||(48780245-48780366)
chr4 (216-353)||(19750546-19750681)
chr4 (216-353)||(19789125-19789260)
chr4 (216-353)||(37728536-37728671)
chr4 (216-349)||(49307999-49308129)
chr4 (216-344)||(25684937-25685064)
chr4 (194-349)||(17382991-17383144)
chr4 (255-350)||(26421632-26421725)
chr4 (216-351)||(13509330-13509463)
chr4 (182-344)||(10447009-10447170)
chr4 (182-288)||(10448198-10448303)
chr4 (182-344)||(10471325-10471486)
chr4 (216-345)||(35935504-35935632)
chr4 (216-344)||(50909643-50909771)
chr4 (216-344)||(10470549-10470676)
chr4 (216-314)||(5525391-5525489)
chr4 (216-350)||(8757672-8757804)
chr4 (195-344)||(35934347-35934492)
chr4 (216-314)||(52491578-52491676)
chr4 (216-344)||(13386503-13386631)
chr4 (215-352)||(21177992-21178127)
chr4 (219-319)||(33296250-33296350)
chr4 (264-352)||(55603550-55603636)
chr4 (182-349)||(5526063-5526228)
chr4 (239-319)||(21539065-21539145)
chr4 (228-344)||(48781029-48781143)
chr4 (216-314)||(49306806-49306903)
chr4 (214-344)||(3927669-3927798)
chr4 (216-314)||(46638696-46638794)
chr4 (258-351)||(1963192-1963284)
chr4 (225-318)||(54110608-54110701)
chr4 (216-287)||(37727755-37727826)
chr4 (258-344)||(1964454-1964539)
chr4 (229-314)||(50909304-50909388)
[»] chr5 (38 HSPs)
chr5 (175-344)||(19752915-19753082)
chr5 (175-349)||(18486832-18487005)
chr5 (201-348)||(2686357-2686505)
chr5 (217-349)||(25055410-25055541)
chr5 (217-349)||(16650827-16650958)
chr5 (175-351)||(25523065-25523240)
chr5 (216-352)||(28538671-28538806)
chr5 (175-314)||(19754060-19754199)
chr5 (175-344)||(18485141-18485316)
chr5 (175-291)||(25524028-25524144)
chr5 (182-348)||(24332912-24333076)
chr5 (216-342)||(36486459-36486584)
chr5 (216-345)||(42195136-42195262)
chr5 (216-348)||(28539791-28539921)
chr5 (216-349)||(42196171-42196303)
chr5 (216-344)||(36485303-36485430)
chr5 (182-349)||(5778773-5778939)
chr5 (216-297)||(16650041-16650122)
chr5 (216-344)||(22940594-22940720)
chr5 (228-358)||(5777890-5778017)
chr5 (214-344)||(25056349-25056479)
chr5 (255-349)||(40255682-40255775)
chr5 (1-48)||(18486515-18486562)
chr5 (182-349)||(33160225-33160389)
chr5 (256-314)||(33158130-33158188)
chr5 (219-314)||(5962546-5962641)
chr5 (193-351)||(20216711-20216868)
chr5 (216-314)||(2186802-2186900)
chr5 (224-344)||(21835044-21835162)
chr5 (182-344)||(20214199-20214359)
chr5 (266-349)||(25524148-25524231)
chr5 (216-314)||(1797268-1797366)
chr5 (216-314)||(5730833-5730931)
chr5 (270-319)||(2685771-2685820)
chr5 (219-264)||(2685867-2685912)
chr5 (269-314)||(18154526-18154570)
chr5 (255-351)||(7311586-7311681)
chr5 (255-323)||(38834111-38834177)
[»] chr2 (40 HSPs)
chr2 (175-352)||(18905918-18906093)
chr2 (175-344)||(13030295-13030460)
chr2 (175-344)||(22848194-22848362)
chr2 (215-353)||(36450891-36451027)
chr2 (214-349)||(18797244-18797379)
chr2 (208-350)||(18904364-18904505)
chr2 (220-314)||(22587929-22588022)
chr2 (216-314)||(24475256-24475354)
chr2 (175-314)||(28617954-28618092)
chr2 (182-276)||(21837109-21837203)
chr2 (195-344)||(11258761-11258909)
chr2 (216-353)||(18299367-18299503)
chr2 (175-291)||(18869092-18869209)
chr2 (182-287)||(22587559-22587663)
chr2 (216-352)||(7899853-7899988)
chr2 (217-312)||(18300697-18300791)
chr2 (221-350)||(23869511-23869638)
chr2 (216-344)||(41878095-41878224)
chr2 (195-348)||(8535606-8535756)
chr2 (182-344)||(11257625-11257785)
chr2 (216-314)||(26545492-26545590)
chr2 (216-349)||(38840464-38840596)
chr2 (215-353)||(11938759-11938895)
chr2 (216-322)||(11996731-11996837)
chr2 (217-314)||(802563-802660)
chr2 (264-349)||(36449776-36449860)
chr2 (182-350)||(8534580-8534745)
chr2 (216-344)||(26544152-26544278)
chr2 (216-287)||(32739710-32739781)
chr2 (216-352)||(38839237-38839372)
chr2 (264-314)||(32739655-32739705)
chr2 (217-314)||(810753-810850)
chr2 (216-349)||(7898689-7898821)
chr2 (262-314)||(24476861-24476913)
chr2 (269-348)||(13567971-13568049)
chr2 (268-314)||(13570580-13570626)
chr2 (201-286)||(1410060-1410145)
chr2 (229-350)||(18868921-18869039)
chr2 (228-344)||(1034453-1034567)
chr2 (270-319)||(41879237-41879286)
[»] chr3 (52 HSPs)
chr3 (175-353)||(12700169-12700344)
chr3 (175-314)||(34019075-34019214)
chr3 (175-344)||(47614188-47614356)
chr3 (182-353)||(8875900-8876070)
chr3 (216-344)||(54540761-54540888)
chr3 (182-349)||(19984847-19985012)
chr3 (175-276)||(47615507-47615608)
chr3 (215-350)||(534496-534630)
chr3 (216-351)||(7758398-7758532)
chr3 (216-352)||(7267639-7267773)
chr3 (216-356)||(23770378-23770517)
chr3 (182-349)||(47610517-47610683)
chr3 (216-314)||(49216279-49216377)
chr3 (175-328)||(12703430-12703582)
chr3 (216-308)||(23769895-23769986)
chr3 (255-344)||(29932709-29932796)
chr3 (255-344)||(29981863-29981950)
chr3 (215-344)||(54539758-54539886)
chr3 (216-344)||(46721191-46721318)
chr3 (182-344)||(8456481-8456641)
chr3 (244-343)||(24516464-24516562)
chr3 (216-350)||(51470426-51470558)
chr3 (182-319)||(11670411-11670548)
chr3 (216-353)||(47609691-47609827)
chr3 (175-314)||(6249641-6249779)
chr3 (217-344)||(46719944-46720070)
chr3 (216-314)||(4271472-4271570)
chr3 (216-314)||(31645005-31645103)
chr3 (216-349)||(29931224-29931356)
chr3 (216-349)||(29980378-29980510)
chr3 (216-344)||(40426749-40426877)
chr3 (182-342)||(6250515-6250672)
chr3 (216-344)||(51469975-51470102)
chr3 (182-329)||(6171181-6171324)
chr3 (1-48)||(47615188-47615235)
chr3 (182-349)||(51347266-51347432)
chr3 (182-349)||(19986008-19986175)
chr3 (216-349)||(22776783-22776915)
chr3 (270-314)||(6170304-6170348)
chr3 (182-346)||(34940125-34940286)
chr3 (258-349)||(51038803-51038893)
chr3 (219-348)||(52104480-52104604)
chr3 (216-353)||(54986978-54987112)
chr3 (255-349)||(7268837-7268929)
chr3 (264-318)||(53901407-53901461)
chr3 (229-286)||(49398186-49398243)
chr3 (217-314)||(55191967-55192064)
chr3 (203-314)||(11671299-11671410)
chr3 (255-344)||(535792-535880)
chr3 (271-353)||(53616042-53616123)
chr3 (217-275)||(53897173-53897231)
chr3 (234-278)||(49220532-49220575)
[»] chr6 (29 HSPs)
chr6 (175-344)||(7314883-7315050)
chr6 (216-352)||(1829574-1829709)
chr6 (175-349)||(7316224-7316397)
chr6 (216-345)||(26575025-26575151)
chr6 (182-344)||(3721615-3721776)
chr6 (182-350)||(8659262-8659429)
chr6 (184-352)||(17496788-17496960)
chr6 (228-351)||(8821869-8821991)
chr6 (216-353)||(26574613-26574748)
chr6 (182-329)||(10785851-10785996)
chr6 (217-351)||(16704469-16704602)
chr6 (216-349)||(27437826-27437958)
chr6 (216-349)||(34834550-34834682)
chr6 (216-288)||(5658814-5658886)
chr6 (228-344)||(8822776-8822891)
chr6 (255-349)||(14823585-14823679)
chr6 (229-349)||(10784590-10784710)
chr6 (216-352)||(6842254-6842389)
chr6 (216-344)||(8660175-8660301)
chr6 (214-344)||(12382680-12382809)
chr6 (255-352)||(14822355-14822451)
chr6 (216-276)||(26717084-26717144)
chr6 (1-48)||(7315916-7315963)
chr6 (271-352)||(3722533-3722613)
chr6 (255-314)||(16703600-16703658)
chr6 (206-349)||(27322029-27322170)
chr6 (182-348)||(29473076-29473240)
chr6 (206-286)||(3333486-3333566)
chr6 (243-314)||(30495695-30495767)
[»] scaffold1303 (1 HSPs)
scaffold1303 (216-349)||(1437-1569)
[»] scaffold0320 (1 HSPs)
scaffold0320 (175-351)||(19484-19659)
[»] scaffold0019 (2 HSPs)
scaffold0019 (216-344)||(60093-60220)
scaffold0019 (216-344)||(61430-61557)
[»] scaffold0294 (2 HSPs)
scaffold0294 (216-350)||(5409-5542)
scaffold0294 (216-349)||(4440-4572)
[»] scaffold0093 (2 HSPs)
scaffold0093 (216-344)||(2436-2562)
scaffold0093 (216-344)||(7059-7185)
[»] scaffold0003 (1 HSPs)
scaffold0003 (216-349)||(49404-49536)
[»] scaffold0302 (2 HSPs)
scaffold0302 (216-344)||(18747-18874)
scaffold0302 (264-350)||(17467-17552)
[»] scaffold0632 (1 HSPs)
scaffold0632 (219-353)||(3282-3414)
[»] scaffold0112 (1 HSPs)
scaffold0112 (255-344)||(37151-37238)
[»] scaffold2034 (2 HSPs)
scaffold2034 (216-323)||(949-1055)
scaffold2034 (216-344)||(236-363)
[»] scaffold0586 (2 HSPs)
scaffold0586 (228-288)||(6401-6461)
scaffold0586 (212-288)||(8994-9069)
[»] scaffold0049 (2 HSPs)
scaffold0049 (224-344)||(7394-7513)
scaffold0049 (206-283)||(7880-7957)
[»] scaffold0045 (1 HSPs)
scaffold0045 (216-314)||(48341-48436)


Alignment Details
Target: chr1 (Bit Score: 160; Significance: 4e-85; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 171 - 386
Target Start/End: Original strand, 43059932 - 43060146
Alignment:
Q  171 aataaattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggcca 270  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  43059932 aataaattaagtacacatgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagctaaatcttaaggggtca 43060031  T
Q  271 aaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaaaatgtatgtaaacctccgct 370  Q
    ||||||||||||||||||||||||| |||||||| |||  ||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  43060032 aaattgtagtttttgtacttaaggggtcaaaatttcaa-atttttgaaagttagagggggtaaagtacactttagcctaaaatgtatgtaaacctccgct 43060130  T
Q  371 atccaaccaagtataa 386  Q
    | ||||||||||||||    
T  43060131 acccaaccaagtataa 43060146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 43059769 - 43059867
Alignment:
Q  1 ttgacggtggagggaagttcggaatagatgtggttggattcttcttggccttcaagaggaagaagaagaagccatttgaattggaagtcaaaagaatga 99  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43059769 ttgacggtggaggtaagttcggaatagatgtggttggattcttcttggtcttcaagaggaagaagaagaagccatttgaattggaagtcaaaagaatga 43059867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 175 - 319
Target Start/End: Complemental strand, 25652885 - 25652741
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| ||||||| | |||||||| |||||| |||||||||||||||||| |||||| ||||||||||||||||| || ||||||||  |||||||| |    
T  25652885 aattaattacacatatggcctgccacgtaggcgttgaataagtcaaaattggccaaaatgaccaaagatgcaaatgggctaaatcttagcgggccaaatt 25652786  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaa 319  Q
    | || ||||||||||||||||||||||||||||||||||| ||||    
T  25652785 tataatttttgtacttaagggatcaaaattgcaagtttttgaaaa 25652741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 175 - 344
Target Start/End: Complemental strand, 11436213 - 11436045
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| ||||||||| || |||||  ||||| |||| |  |||||||||||||||||| |||||||||||||||| |  |||||||| |||||||||||    
T  11436213 aattaattacacatgtggcatgccacttaggcgttgactcggtcaaaattgaccaaaagaaccaaagatgcaaatgggttaaatcttagggggccaaaat 11436114  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    |||||||||| |||||||  |  ||||||||||||| |||| ||||||| |||||| |||||||||||||    
T  11436113 tgtagtttttatacttaaaaggccaaaattgcaagt-ttttgaaagttaaagggggaaaagtgcacttta 11436045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 175 - 344
Target Start/End: Original strand, 36613834 - 36614002
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || |||||||| |||||| ||||||||||||||||||| ||||||||| |||| ||||||   || |||||||| |||| ||||||    
T  36613834 aattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgatcaaaaggactaaagttgcaaagaggctaaatcttagggggtcaaaat 36613933  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    ||||||||||||||||| |||  ||||||| |||| |||||||||||||| || || ||| |||||||||    
T  36613934 tgtagtttttgtacttagggggccaaaattacaag-tttttaaaagttaggggaggaaaaatgcacttta 36614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 216 - 352
Target Start/End: Original strand, 11437170 - 11437305
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||||||||||||| |||||||| ||| | |  |||||||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  11437170 gtcaaaattgaccaaaaggatcaaagatgtaaaagggttaaatcttagggggccaaaattgtagtttttgtacttaagggaccaaaattgcaag-ttttt 11437268  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaaa 352  Q
     |||||||  ||||  ||||||||||||| |||||||    
T  11437269 gaaagttaagggggaaaaagtgcactttagcctaaaa 11437305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 195 - 344
Target Start/End: Original strand, 39222423 - 39222572
Alignment:
Q  195 tgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagg 294  Q
    ||||| |||||| |||||||||||||||||| |||||| ||||||||||||||||| || ||||||||  |||| || |||||||||||| |||||| ||    
T  39222423 tgccacgtaggcgttgaataagtcaaaattgcccaaaaagaccaaagatgcaaatgggcaaaatcttagagggctaacattgtagtttttatacttaggg 39222522  T
Q  295 gatcaaaattgcaagttttttaaaagttagagggggt-aaagtgcacttta 344  Q
    |  |||||||||||| ||||| ||||||| ||||||| |||||||||||||    
T  39222523 ggccaaaattgcaag-tttttgaaagttaaagggggtaaaagtgcacttta 39222572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 194 - 353
Target Start/End: Original strand, 51685714 - 51685872
Alignment:
Q  194 ctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaag 293  Q
    |||||| |||||| ||||||  || ||||||| |||||||||||||||||||||| | || |||||||| |||| |||||||||||||||||||| ||      
T  51685714 ctgccacgtaggcgttgaattggttaaaattggccaaaaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgtagtttttgtacataga 51685813  T
Q  294 ggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaaaat 353  Q
    ||  |||||| ||||  ||||| |||||||||||||| ||||||||||||| ||||||||    
T  51685814 gggccaaaatcgcaa-ctttttgaaagttagagggggaaaagtgcactttagcctaaaat 51685872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 203 - 352
Target Start/End: Complemental strand, 24422943 - 24422795
Alignment:
Q  203 aggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaa 302  Q
    |||| |||| || |||||||||||||||||||| ||||  |||||  | || |||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  24422943 aggcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaa 24422844  T
Q  303 ttgcaagttttttaaaagttagagggggt-aaagtgcactttaacctaaaa 352  Q
    |||||||| |||| ||||||| ||||||| ||||||||||||| |||||||    
T  24422843 ttgcaagt-ttttgaaagtta-agggggtaaaagtgcactttagcctaaaa 24422795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 211 - 349
Target Start/End: Complemental strand, 43058920 - 43058784
Alignment:
Q  211 aataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagt 310  Q
    ||||||||||||||||||||||||| |||||||| ||| | || ||||||||  |||| |||||||||||||||||||||| ||| ||||||||||||||    
T  43058920 aataagtcaaaattgaccaaaaggatcaaagatgtaaaggggctaaatcttagagggctaaaattgtagtttttgtacttagggggtcaaaattgcaagt 43058821  T
Q  311 tttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
     |||| |||||||| ||||  |||||| |||||||||||    
T  43058820 -ttttcaaagttag-ggggaaaaagtgtactttaaccta 43058784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 216 - 353
Target Start/End: Original strand, 45149941 - 45150077
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggc-caaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||||||| ||||||||| |||||||||||| | || |||||||| ||||  ||||||||| |||||||||||||||||  |||||||||||| ||||    
T  45149941 gtcaaaattggccaaaaggatcaaagatgcaaaggggctaaatcttagggggggcaaaattgttgtttttgtacttaaggggccaaaattgcaag-tttt 45150039  T
Q  315 taaaagttagagggggtaaagtgcactttaacctaaaat 353  Q
    | |||||||| ||||| ||||||||||||||||||||||    
T  45150040 tgaaagttag-gggggaaaagtgcactttaacctaaaat 45150077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 175 - 349
Target Start/End: Complemental strand, 50680502 - 50680330
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || |||||| | |||||| |||||||||||||||||||||||||||| |||||||||||| | |  |||||||| ||| | |||||    
T  50680502 aattaattacacacgtggcctgctacgtaggcgttgaataagtcaaaattgaccaaaaggatcaaagatgcaaaggggttaaatcttaggggactaaaat 50680403  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    | |||||||| |||||| |||  ||||||||||||| ||||  |||||| |||||| ||| ||||||||||||||    
T  50680402 tatagtttttatacttagggggccaaaattgcaagt-ttttggaagtta-agggggaaaaatgcactttaaccta 50680330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 216 - 351
Target Start/End: Original strand, 35595163 - 35595298
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattg-tagtttttgtacttaagggatcaaaattgc-aagtttt 313  Q
    ||||||||||||||||||||||||||||||||| | || ||||||| |||||||||||||| |||||||| ||| || ||| |||||||||| |||||||    
T  35595163 gtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatctt-aggggccaaaattgttagtttttatacatagggggtcaaaattgctaagtttt 35595261  T
Q  314 ttaaaagttagagggggtaaagtgcactttaacctaaa 351  Q
    || |||||||||||||| ||||| ||||||| ||||||    
T  35595262 tt-aaagttagagggggaaaagtacactttagcctaaa 35595298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 344
Target Start/End: Complemental strand, 51684496 - 51684369
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||| |||||||||||||||||||||| | || |||||||| ||||||||||||||||||||| ||| || |||  |||||||||||  |||||    
T  51684496 gtcaaaattggccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacatagggggccaaaattgcaa-cttttt 51684398  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
    ||||||||  ||||| |||||||||||||    
T  51684397 aaaagttaaggggggaaaagtgcacttta 51684369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 182 - 348
Target Start/End: Original strand, 39153054 - 39153218
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    |||||| || || ||||| ||||||||||| |  ||||||||||||||||||||||||||||||||| | |  ||||||||  ||| |||||||||||||    
T  39153054 tacacacgtggcatgccacgtaggcattgactg-gtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtt 39153152  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacct 348  Q
    ||||||| ||||||  |||||||||||| ||||| ||| |||  ||||  |||||||||||||||||    
T  39153153 tttgtacataaggggccaaaattgcaag-tttttgaaacttaagggggaaaaagtgcactttaacct 39153218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 195 - 348
Target Start/End: Original strand, 24426025 - 24426177
Alignment:
Q  195 tgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagg 294  Q
    ||||||| | || |||| || |||||||||||||||||| | ||||  |||||  | || |||||||| ||| | |||||||||||||||||||||| ||    
T  24426025 tgccatgcaagcgttgactaggtcaaaattgaccaaaagtatcaaatttgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttaggg 24426124  T
Q  295 gatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacct 348  Q
    |  |||||||||||| ||||| |||||||||||||| |||||||||||||||||    
T  24426125 ggccaaaattgcaag-tttttgaaagttagaggggggaaagtgcactttaacct 24426177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 175 - 348
Target Start/End: Original strand, 37526808 - 37526979
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || |||| ||| |||||| ||||||||||||||||||| ||||| ||||||||||||||| | || ||||||| ||||||||||||    
T  37526808 aattaattacacacgtggcctaccacgtaggcgttgaataagtcaaaattgatcaaaaagaccaaagatgcaaaggggctaaatctt-aggggccaaaat 37526906  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacct 348  Q
    ||| |||| | || ||| ||   |||||||||||| ||||| |||||||  ||||| ||||| |||||||||||    
T  37526907 tgtggtttctatatttagggagccaaaattgcaag-tttttgaaagttaaggggggaaaagtacactttaacct 37526979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 344
Target Start/End: Original strand, 45157180 - 45157306
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||||||||||||||||||| | |  ||||||||| ||| |||||||||||||||||||| || |||  |||||||||||| |||||    
T  45157180 gtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtcaaaattgtagtttttgtacatagggggccaaaattgcaag-ttttt 45157278  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
     ||| |||| ||||| |||||||||||||    
T  45157279 gaaacttag-ggggggaaagtgcacttta 45157306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 175 - 344
Target Start/End: Complemental strand, 36613023 - 36612856
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || |||||||| ||| || |||||||||| |||||||||||||| ||||||||||||||| |  | |||||||| ||||  |||||    
T  36613023 aattaattacacacgtggcctgccacgtaagcgttgaataagttaaaattgaccaaaatgaccaaagatgcaaagggactaaatcttagggggttaaaat 36612924  T
Q  275 tgtagtttttgtacttaagggat-caaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    ||||||||||||||||||  ||| |||||||||||  ||||| |||||||  ||||| ||| |||||||||    
T  36612923 tgtagtttttgtacttaa--gatccaaaattgcaa-atttttgaaagttaaggggggaaaaatgcacttta 36612856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 208 - 314
Target Start/End: Original strand, 30249453 - 30249559
Alignment:
Q  208 ttgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgca 307  Q
    |||| |||||||||||||| ||||| || ||||||| ||||||||| ||||||||||||| |||||||||||||||||||| |||  |||||||||| ||    
T  30249453 ttgactaagtcaaaattgatcaaaaagatcaaagatacaaatgagctaaatcttaaggggtcaaaattgtagtttttgtacataaaagatcaaaattaca 30249552  T
Q  308 agttttt 314  Q
    | |||||    
T  30249553 acttttt 30249559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 203 - 344
Target Start/End: Complemental strand, 52275111 - 52274971
Alignment:
Q  203 aggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagcc-aaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaa 301  Q
    |||| |||| || |||||||||||||||||||| ||||  ||||| |||| | |||||||| ||| |||||||||||||||||||||||| ||| |||||    
T  52275111 aggcgttgactatgtcaaaattgaccaaaaggatcaaatttgcaa-tgaggctaaatcttaggggcccaaaattgtagtttttgtacttagggggtcaaa 52275013  T
Q  302 attgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    ||||||||| |||| |||||||| ||||  |||||||||||||    
T  52275012 attgcaagt-ttttgaaagttaggggggtaaaagtgcacttta 52274971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 351
Target Start/End: Complemental strand, 39152094 - 39151927
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    ||||||||| || ||||| ||||||||||| |  ||||||||||||||||||||||||||||||||| | |  ||||||||| | | |||||||||||||    
T  39152094 tacacatgtggcatgccacgtaggcattgactg-gtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagagtcaaaattgtagtt 39151996  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaaa 351  Q
    ||||||| || |||  ||||||| |||| ||||| ||| |||  ||||  ||| ||||||||||||||||    
T  39151995 tttgtacatagggggccaaaattacaag-tttttgaaacttaagggggaaaaaatgcactttaacctaaa 39151927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 344
Target Start/End: Original strand, 39699738 - 39699864
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||||||  |||| |||||  | || |||||||| ||||||||||||||||||| |||||||| ||| ||||||||||||| || ||    
T  39699738 gtcaaaattgaccaaaaggattaaagttgcaatggggctaaatcttagggggccaaaattgtagtttctgtacttagggggtcaaaattgcaag-ttatt 39699836  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
     |||||||| ||||| |||||||||||||    
T  39699837 gaaagttag-gggggaaaagtgcacttta 39699864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 352
Target Start/End: Original strand, 52828041 - 52828176
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||  |||||||||||||| |||||  | || |||||||| |||| | ||||||| ||||| ||||||| ||   |||||||||||||||||     
T  52828041 gtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggagccaaaattgcaagtttttg 52828140  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaaa 352  Q
    |||| |||||||||| |||||||||||||||||||||    
T  52828141 aaaa-ttagagggggaaaagtgcactttaacctaaaa 52828176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 234 - 350
Target Start/End: Original strand, 23980455 - 23980570
Alignment:
Q  234 gaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaa 333  Q
    ||||||| ||||||| | || |||||||| | | |||||||| ||||||||||||||| ||   |||||||||||||||||| |||||||||||||| ||    
T  23980455 gaccaaaaatgcaaaggggctaaatcttaggagaccaaaattatagtttttgtacttagggagccaaaattgcaagtttttt-aaagttagagggggaaa 23980553  T
Q  334 agtgcactttaacctaa 350  Q
    ||||||||||| |||||    
T  23980554 agtgcactttagcctaa 23980570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 348
Target Start/End: Original strand, 43378684 - 43378814
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||| |||||||||||  ||||||||||| | || |||||||| | || |||||||||| |||||||||||| ||||||||||||| ||| |||||    
T  43378684 gtcaaaatcgaccaaaaggattaaagatgcaaaggtgctaaatcttaggtggtcaaaattgtaatttttgtacttaggggatcaaaattgtaag-ttttt 43378782  T
Q  316 aaaagttagagggggtaaagtgcactttaacct 348  Q
     ||||||| || | | |||||||||||||||||    
T  43378783 gaaagtta-agagagaaaagtgcactttaacct 43378814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 230 - 344
Target Start/End: Original strand, 33088602 - 33088715
Alignment:
Q  230 aaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggg 329  Q
    |||| ||||||| |||||| | || |||||||| || | |||||||||||||||||||||||| || ||||||||||||| ||||| || ||||||| ||    
T  33088602 aaagaaccaaagttgcaaaggggctaaatcttagggaggcaaaattgtagtttttgtacttaaagggtcaaaattgcaag-tttttgaatgttagagagg 33088700  T
Q  330 gtaaagtgcacttta 344  Q
    | |||||||||||||    
T  33088701 gaaaagtgcacttta 33088715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 214 - 344
Target Start/End: Complemental strand, 35594347 - 35594220
Alignment:
Q  214 aagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttt 313  Q
    |||||||||||| | |||||||||||||||||||| | || |||| || ||||| |||||||||||||||  ||||| |||| ||||||||||||| |||    
T  35594347 aagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaat-tttaggggtcaaaattgtagttttaatactt-aggggtcaaaattgcaag-ttt 35594251  T
Q  314 ttaaaagttagagggggtaaagtgcacttta 344  Q
    || |||||||| || || |||||||||||||    
T  35594250 ttgaaagttaggggtggaaaagtgcacttta 35594220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 314
Target Start/End: Complemental strand, 44404572 - 44404474
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||||||||| ||||||||||||||||  || |||| ||| |||||||||||| ||||||||||||||| |||   |||||||| |||||||    
T  44404572 gtcaaaattgaccaaaatgaccaaagatgcaaattggctaaattttagggggccaaaattatagtttttgtacttagggggctaaaattgctagttttt 44404474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 314
Target Start/End: Complemental strand, 45148710 - 45148613
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||||||| |||||||||||||||||||||| | |  |||||||| |||| |||||||||||||||| |||||| |||  |||||||||||||||||    
T  45148710 gtcaaaattggccaaaaggaccaaagatgcaaaggggttaaatcttaggggggcaaaattgtagttttt-tacttagggggccaaaattgcaagttttt 45148613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 175 - 248
Target Start/End: Complemental strand, 39221485 - 39221412
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaa 248  Q
    |||||| |||||| || |||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||    
T  39221485 aattaattacacacgtggcctgccacgtaggcgttgaattagtcaaaattgaccaaaaggaccaaagatgcaaa 39221412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 216 - 344
Target Start/End: Complemental strand, 52827477 - 52827350
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||  |||||||||||||| |||||  | || |||||||| ||||   ||||||| ||||| ||||||| ||| |||||||||||||| ||||    
T  52827477 gtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagt-tttt 52827379  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
     |||||||| ||||| |||||||||||||    
T  52827378 gaaagttagggggggaaaagtgcacttta 52827350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 195 - 324
Target Start/End: Original strand, 14999906 - 15000033
Alignment:
Q  195 tgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagg 294  Q
    ||||| |||||||||||  | |||||||||||| ||||||| ||||| ||||||||  | |||| ||| | || ||  ||||||| ||||||||||| ||    
T  14999906 tgccacgtaggcattgac-aggtcaaaattgacaaaaaggatcaaagttgcaaatggactaaattttaggtggtcatgattgtagattttgtacttaggg 15000004  T
Q  295 gatcaaaattgcaagttttttaaaagttag 324  Q
    ||||||||||||||| ||||||||||||||    
T  15000005 gatcaaaattgcaag-tttttaaaagttag 15000033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 344
Target Start/End: Complemental strand, 39698692 - 39698566
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||||||  |||| |||||    || |||||||| | |||||||||| |||||| |||||||| |||  |||||||| ||||||||     
T  39698692 gtcaaaattgaccaaaaggattaaagttgcaacgaggctaaatctta-gtggccaaaattatagtttctgtacttagggggccaaaattgaaagttttt- 39698595  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
    ||||||||  |||||||||||||||||||    
T  39698594 aaaagttaaggggggtaaagtgcacttta 39698566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 175 - 344
Target Start/End: Original strand, 50681538 - 50681702
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| ||||||  | ||||||||||||||| |||||||| |||||||||| ||| |||||||||||||||||   || |||||    ||| |||| ||    
T  50681538 aattaattacacacatggcctgccatgtaggcgttgaataaatcaaaattgatcaataggaccaaagatgcaaagaggctaaatc----gggaccaatat 50681633  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    |||||||||| || |||  |   ||||||||||||||||| |||| | ||| |||| |||||||||||||    
T  50681634 tgtagtttttatagttagagagccaaaattgcaagtttttgaaaattaaga-ggggaaaagtgcacttta 50681702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 216 - 349
Target Start/End: Complemental strand, 14999411 - 14999283
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||||| ||||||| ||||| |||| |||||| ||||   |  ||  ||||||||||||||||||||||| ||| |||||||||||||| ||||    
T  14999411 gtcaaaattgacaaaaaggatcaaagttgcagatgagctaaat---agaggatcaaaattgtagtttttgtacttagggggtcaaaattgcaagt-tttt 14999316  T
Q  316 aaaagttagagggggtaaagtgcactttaaccta 349  Q
     |||||||| ||||| ||||| ||||||| ||||    
T  14999315 gaaagttag-gggggaaaagtacactttagccta 14999283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 349
Target Start/End: Original strand, 52276113 - 52276266
Alignment:
Q  195 tgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagg 294  Q
    ||||||| | || |||| || ||||||||||| |||||||| ||||  |||||  | || |||||||| ||| | ||| || ||||||||||||||| ||    
T  52276113 tgccatgcaagcgttgactaggtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggggactaaatttatagtttttgtacttaggg 52276212  T
Q  295 gatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    |  ||||||| |||  ||||| ||||||||| |||| ||||||||||||||||||    
T  52276213 ggccaaaattacaa-atttttgaaagttagaagggggaaagtgcactttaaccta 52276266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 314
Target Start/End: Complemental strand, 33088194 - 33088099
Alignment:
Q  219 aaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||| |||||||||| ||||| ||||||| || ||||||||||||   ||||||||||||||| || ||| | ||| |||||| |||||||||    
T  33088194 aaaattggccaaaaggactaaagaagcaaatgggctaaatcttaagggaataaaattgtagtttttatatttaggagataaaaattacaagttttt 33088099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 319
Target Start/End: Complemental strand, 40384855 - 40384752
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||| ||||||||||||||||||||||   || |||| ||| |||  |||||||||||||||||||| || | ||  |||||||||| |||||     
T  40384855 gtcaaaattggccaaaaggaccaaagatgcaaagaggctaaattttaggggatcaaaattgtagtttttgtacataggagactaaaattgcaactttttg 40384756  T
Q  316 aaaa 319  Q
    ||||    
T  40384755 aaaa 40384752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 311
Target Start/End: Original strand, 44411937 - 44412032
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtt 311  Q
    |||||||||| | ||||||| ||||| |||||| |  | ||||||||| |||  |||||||||||||||||||||| ||||  |||||||||||||    
T  44411937 gtcaaaattggcaaaaaggatcaaagttgcaaagggcctaaatcttaaaggggtaaaattgtagtttttgtacttaggggactaaaattgcaagtt 44412032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 31194185 - 31194111
Alignment:
Q  214 aagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtac 288  Q
    |||||| ||||| | ||||||||||||||||||||   || ||||||||| ||||||||||| ||||||||||||    
T  31194185 aagtcagaattggcaaaaaggaccaaagatgcaaaaaggctaaatcttaaagggccaaaattttagtttttgtac 31194111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 353
Target Start/End: Complemental strand, 41364958 - 41364823
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||| ||||| |||||||| |||||  | || |||||||| |||| | ||||||| ||||| ||| ||| |||  ||||||||||||| ||||    
T  41364958 gtcaaaattgatcaaaatgaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtatttagggggccaaaattgcaagt-tttt 41364860  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaaat 353  Q
     |||||||| ||| | ||||||||||||| || |||||    
T  41364859 gaaagttag-gggagaaaagtgcactttagccaaaaat 41364823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 349
Target Start/End: Complemental strand, 7674603 - 7674526
Alignment:
Q  269 caaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    |||||||||||||||||||||| ||||  |||||||||||| |||||||||||||| ||||| |||| |||||||| ||||    
T  7674603 caaaattgtagtttttgtactt-agggcccaaaattgcaag-tttttaaaagttag-gggggaaaagggcactttagccta 7674526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 295
Target Start/End: Complemental strand, 46066652 - 46066574
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaaggg 295  Q
    ||||||||||| ||||| || || ||||||||||  || |||||||| ||||| ||||||||||||||||||| ||||||    
T  46066652 gtcaaaattgatcaaaaagatcagagatgcaaattggctaaatctta-ggggctaaaattgtagtttttgtacataaggg 46066574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 349
Target Start/End: Original strand, 35066972 - 35067105
Alignment:
Q  215 agtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||||||||||||||||||| |    |||||| | || |||| ||| ||||||||||||||||||||||| | || |||  |||||| ||||  ||||    
T  35066972 agtcaaaattgaccaaaaggactattattgcaaaggggctaaatattagggggccaaaattgtagtttttgttcatagggggccaaaatcgcaa-ctttt 35067070  T
Q  315 taaaagttagagggggtaaagtgcactttaaccta 349  Q
    | ||| |||  ||||| ||||||||||||| ||||    
T  35067071 tgaaacttaaggggggaaaagtgcactttagccta 35067105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 314
Target Start/End: Original strand, 7675450 - 7675528
Alignment:
Q  236 ccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||||| | || |||||||| |||| ||||||| || ||||| |||||| | |  |||||||||||||||||    
T  7675450 ccaaagatgcaaaggggctaaatcttagggggtcaaaattataatttttttacttaggagggcaaaattgcaagttttt 7675528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 288
Target Start/End: Complemental strand, 30248243 - 30248170
Alignment:
Q  214 aagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtac 288  Q
    |||||||||||| |||||| || |||||||||||| |||  ||||||| || ||  |||||||||||||||||||    
T  30248243 aagtcaaaattggccaaaatgatcaaagatgcaaaggagttaaatctt-agagggtaaaattgtagtttttgtac 30248170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 314
Target Start/End: Complemental strand, 45156179 - 45156081
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||||||||| |||||||||| ||||   |  ||||||||  |||  ||||||||||||||||||| ||   | ||||||||| ||||||||    
T  45156179 gtcaaaattgaccaaaaagaccaaagatacaaagaggttaaatcttagagggttaaaattgtagtttttgtacatagaaggtcaaaattgtaagttttt 45156081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 16290170 - 16290126
Alignment:
Q  270 aaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||||||| ||| ||||||| ||||||||||| |||||    
T  16290170 aaaattgtagtttttatacataagggaccaaaattgcaacttttt 16290126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 344
Target Start/End: Original strand, 41366114 - 41366228
Alignment:
Q  228 caaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagg 327  Q
    |||||||||||||| |||||  | || |||||||| ||||| ||| |||| |||||  ||||||||||   ||||||||| |||||| ||| |||||  |    
T  41366114 caaaaggaccaaagttgcaatggggctaaatcttagggggctaaa-ttgtggttttgatacttaaggggctaaaattgcatgtttttgaaa-gttaggag 41366211  T
Q  328 gggtaaagtgcacttta 344  Q
    ||| |||||||||||||    
T  41366212 gggaaaagtgcacttta 41366228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 319
Target Start/End: Complemental strand, 43377850 - 43377747
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagcc-aaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||||||||||||||||| ||||| || ||| ||| | |||| ||| | |||||||||| || ||||| ||||||| |||  |||||||||||| |||    
T  43377850 gtcaaaattgaccaaaaggatcaaaggtgtaaa-gagactaaattttaggaggccaaaattataatttttatacttaaaggactaaaattgcaagtgttt 43377752  T
Q  315 taaaa 319  Q
     ||||    
T  43377751 aaaaa 43377747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 175 - 342
Target Start/End: Original strand, 1824008 - 1824174
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| ||||||||| |||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||   || |||||||| |||||||||||    
T  1824008 aattaattacacatgtggcctaccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaat 1824107  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactt 342  Q
    ||||||||||||||||| |||| |||||||||||| ||||| |||||||||||||| ||| |||||||    
T  1824108 tgtagtttttgtacttaggggaccaaaattgcaag-tttttgaaagttagagggggaaaaatgcactt 1824174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 175 - 342
Target Start/End: Original strand, 1858453 - 1858619
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| ||||||||| |||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||   || |||||||| |||||||||||    
T  1858453 aattaattacacatgtggcctaccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagggggccaaaat 1858552  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactt 342  Q
    ||||||||||||||||| |||| |||||||||||| ||||| |||||||||||||| ||| |||||||    
T  1858553 tgtagtttttgtacttaggggaccaaaattgcaag-tttttgaaagttagagggggaaaaatgcactt 1858619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 175 - 344
Target Start/End: Complemental strand, 10006515 - 10006347
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| | || |||||||| |||||||||||    
T  10006515 aattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaat 10006416  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    ||| |||||  |||||| |||  ||||||||||||| |||| |||||||||||||| |||||||||||||    
T  10006415 tgttgttttgatacttagggggccaaaattgcaagt-ttttgaaagttagagggggaaaagtgcacttta 10006347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 217 - 344
Target Start/End: Complemental strand, 22220517 - 22220391
Alignment:
Q  217 tcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttta 316  Q
    |||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||||||||||| ||| || ||| |||||||||||||| ||||     
T  22220517 tcaaaattgatcaaaaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgtagtttttatacatagggggtcaaaattgcaagtatttt- 22220419  T
Q  317 aaagttagagggggtaaagtgcacttta 344  Q
    |||||||||||||| |||||||||||||    
T  22220418 aaagttagagggggaaaagtgcacttta 22220391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 175 - 349
Target Start/End: Original strand, 10007693 - 10007866
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || |||||||| |||||| |||||||||||||||||||| |||||||||||||||||||| | || |||||||| ||| |||||||    
T  10007693 aattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgacgaaaaggaccaaagatgcaaaggggctaaatcttaggggaccaaaat 10007792  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    ||| |||| | |||||| |||  |||||||||||| ||||| |||||||  ||||| ||||||||||||| ||||    
T  10007793 tgtggtttctatacttagggggccaaaattgcaag-tttttgaaagttaaggggggaaaagtgcactttagccta 10007866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 200 - 349
Target Start/End: Complemental strand, 5514127 - 5513980
Alignment:
Q  200 tgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatca 299  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| | || |||| ||| |||| ||||||||||||||||||||||| |||  ||    
T  5514127 tgtaggcattgaataagtcaaaattgatcaaaaggaccaaagatgcaaaggggctaaattttaggggggcaaaattgtagtttttgtacttagggggcca 5514028  T
Q  300 aaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    |||||| ||| ||||| |||||||| ||||  ||||||||||||| ||||    
T  5514027 aaattggaag-tttttgaaagttag-ggggtaaaagtgcactttagccta 5513980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 216 - 353
Target Start/End: Complemental strand, 24123012 - 24122877
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||||||||||||||||||||||||||  ||| |||||||| ||| | |||||| ||||||||||||||| ||| |||||||||||| ||||||    
T  24123012 gtcaaaattgaccaaaaggaccaaagatgcaaagaagctaaatcttaggggactaaaattatagtttttgtacttagggggtcaaaattgcaaatttttt 24122913  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaaat 353  Q
     |||||||| ||||| ||| ||||||||| ||||||||    
T  24122912 -aaagttag-gggggaaaaatgcactttagcctaaaat 24122877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 192 - 344
Target Start/End: Complemental strand, 1823707 - 1823555
Alignment:
Q  192 gcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaaga-tgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtactt 290  Q
    |||||||| |||||| |||||||| ||||||||| |||||||||||||| | |||||||| || |||||||| ||| || ||||||||||||||||||||    
T  1823707 gcctgccacgtaggcgttgaataaatcaaaattggccaaaaggaccaaaaaatgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtactt 1823608  T
Q  291 aagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    |  || |||||||||||||| ||||||||||||  ||||  ||||| |||||||    
T  1823607 agagggtcaaaattgcaagt-ttttaaaagttaagggggaaaaagtacacttta 1823555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 192 - 344
Target Start/End: Complemental strand, 1858152 - 1858000
Alignment:
Q  192 gcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaaga-tgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtactt 290  Q
    |||||||| |||||| |||||||| ||||||||| |||||||||||||| | |||||||| || |||||||| ||| || ||||||||||||||||||||    
T  1858152 gcctgccacgtaggcgttgaataaatcaaaattggccaaaaggaccaaaaaatgcaaatgggctaaatcttaggggaccgaaattgtagtttttgtactt 1858053  T
Q  291 aagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    |  || |||||||||||||| ||||||||||||  ||||  ||||| |||||||    
T  1858052 agagggtcaaaattgcaagt-ttttaaaagttaagggggaaaaagtacacttta 1858000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 194 - 319
Target Start/End: Original strand, 23169940 - 23170073
Alignment:
Q  194 ctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtag--------tttttg 285  Q
    |||||| |||||||||||||||||||||||||||||||||||  |||||||||| ||||| ||||| |||||| |||||||| |||        ||||||    
T  23169940 ctgccacgtaggcattgaataagtcaaaattgaccaaaaggattaaagatgcaattgagctaaatcataagggaccaaaattatagtttttgactttttg 23170039  T
Q  286 tacttaagggatcaaaattgcaagttttttaaaa 319  Q
    |||||| |||||||||||||||||||||| ||||    
T  23170040 tacttaggggatcaaaattgcaagtttttgaaaa 23170073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 216 - 348
Target Start/End: Original strand, 30570227 - 30570357
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||| |||||||||||||||||||||| | || |||||||| |||||||||||| || ||||||||| ||| |||||||||||||||  |||||    
T  30570227 gtcaaaattggccaaaaggaccaaagatgcaaaagggctaaatcttagggggccaaaattctaatttttgtacataa-ggatcaaaattgcaa-cttttt 30570324  T
Q  316 aaaagttagagggggtaaagtgcactttaacct 348  Q
    |||| |||||||||  || ||||||||||||||    
T  30570325 aaaacttagaggggaaaaggtgcactttaacct 30570357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 222 - 314
Target Start/End: Original strand, 32207302 - 32207394
Alignment:
Q  222 attgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||||||||||||||||||||||||   || |||||||||| |||||||||||||||||||||||||| ||  ||||||||||||||||||    
T  32207302 attgaccaaaaggaccaaagatgcaaagaggctaaatcttaagaggccaaaattgtagtttttgtacttagggcgtcaaaattgcaagttttt 32207394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 348
Target Start/End: Original strand, 40471118 - 40471248
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||| |||||||||| ||||   |  |||||||||||||| |||||||||||||||||| || | ||| |||||||| |||||||||    
T  40471118 gtcaaaattgaccaaaatgaccaaagatacaaagaggttaaatcttaaggggctaaaattgtagtttttgta-tttatggaccaaaattgtaagtttttt 40471216  T
Q  316 aaaagttagagggggtaaagtgcactttaacct 348  Q
     ||||||| |||||| |||||||||||||||||    
T  40471217 -aaagttaaagggggaaaagtgcactttaacct 40471248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 216 - 319
Target Start/End: Complemental strand, 43661395 - 43661292
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||| ||||||||||| |||||||||||||| | || |||||||| |||||||||||| |||||||||||| ||||||| |||||||| || ||||||    
T  43661395 gtcaaagttgaccaaaagaaccaaagatgcaaaggggctaaatcttagggggccaaaattatagtttttgtacataagggaccaaaattgtaactttttt 43661296  T
Q  316 aaaa 319  Q
    ||||    
T  43661295 aaaa 43661292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 2379895 - 2379961
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagttt 282  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2379895 gtcaaaattgaccaaaagaaccaaagatgcaaatgagctaaatcttaaggggccaaaattgtagttt 2379961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 344
Target Start/End: Original strand, 18979091 - 18979218
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||| | ||||||| ||||| |||||||| || ||||| |||||||||||||||||||||||| || ||| |||  |||||||||||| || ||    
T  18979091 gtcaaaattggcaaaaaggatcaaagttgcaaatgggctaaatcataaggggccaaaattgtagtttttatatttagggggccaaaattgcaag-ttgtt 18979189  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
     |||||||| ||||| |||||||||||||    
T  18979190 gaaagttagggggggaaaagtgcacttta 18979218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 352
Target Start/End: Complemental strand, 30569016 - 30568882
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||| ||||| |||||||||||||||||||||| | || |||||||| |||  ||||||| |||||||||||| |||| ||||||||||| ||  |||||    
T  30569016 gtcacaattggccaaaaggaccaaagatgcaaaggggctaaatcttaggggatcaaaattatagtttttgtacctaagagatcaaaattgtaa-cttttt 30568918  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaaa 352  Q
     ||| |||||||||| ||||||||||||| |||||||    
T  30568917 gaaacttagaggggg-aaagtgcactttagcctaaaa 30568882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 344
Target Start/End: Original strand, 22221333 - 22221462
Alignment:
Q  214 aagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttt 313  Q
    |||||||||||| | ||||||| |||||||| ||| | || |||||||| |||| |||||||||||||||  |||||| ||| ||||||||||||| |||    
T  22221333 aagtcaaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaag-ttt 22221431  T
Q  314 ttaaaagttagagggggtaaagtgcacttta 344  Q
    || |||||||| || || |||||||||||||    
T  22221432 ttgaaagttaggggtggaaaagtgcacttta 22221462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 214 - 344
Target Start/End: Original strand, 22227675 - 22227804
Alignment:
Q  214 aagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttt 313  Q
    |||||||||||| | ||||||| |||||||| ||| | || |||||||| |||| |||||||||||||||  |||||| ||| ||||||||||||| |||    
T  22227675 aagtcaaaattggctaaaaggatcaaagatgtaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaag-ttt 22227773  T
Q  314 ttaaaagttagagggggtaaagtgcacttta 344  Q
    || |||||||| || || |||||||||||||    
T  22227774 ttgaaagttaggggtggaaaagtgcacttta 22227804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 216 - 314
Target Start/End: Original strand, 24123869 - 24123967
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||||||||||||||||||||||||| | || |||||||| | ||| ||||||||| |||| ||||||||| |  |||||||||||||||||    
T  24123869 gtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggaggctaaaattgtaattttagtacttaagaggccaaaattgcaagttttt 24123967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 216 - 314
Target Start/End: Original strand, 43661794 - 43661892
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||| |||||||||||||||||||| || || |||||||| |||||||||||| |||||||||||| ||  |||| |||||||||| |||||    
T  43661794 gtcaaaattgatcaaaaggaccaaagatgcaattgggcgaaatcttagggggccaaaattttagtttttgtacatagaggattaaaattgcaacttttt 43661892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 346
Target Start/End: Original strand, 29968308 - 29968436
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||| |||||| ||  |||| |||||  | || |||||||| ||| ||| |||||||||||||||||||| |||  |||||||||||| |||||    
T  29968308 gtcaaaattggccaaaatgattaaagttgcaatggggctaaatcttaggggaccagaattgtagtttttgtacttagggggccaaaattgcaag-ttttt 29968406  T
Q  316 aaaagttagagggggtaaagtgcactttaac 346  Q
    |||||||| |||||| |||||||||||||||    
T  29968407 aaaagtta-agggggaaaagtgcactttaac 29968436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 349
Target Start/End: Original strand, 8389660 - 8389792
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||  ||||||||||||| ||| ||| | |  |||||||| ||| | ||||||||||||||||||| ||||||| ||||||||||| |||||     
T  8389660 gtcaaaattgttcaaaaggaccaaaaatgtaaaggggttaaatcttaggggactaaaattgtagtttttgtacataagggaccaaaattgcaactttttg 8389759  T
Q  316 aaaagttagagggggtaaagtgcactttaaccta 349  Q
    |||  | ||| |||| ||||||||||||||||||    
T  8389760 aaacttaaga-ggggaaaagtgcactttaaccta 8389792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 196 - 276
Target Start/End: Complemental strand, 11456759 - 11456679
Alignment:
Q  196 gccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattg 276  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||  | || ||||| || |||||||||||||    
T  11456759 gccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaatggggctaaatcatagggggccaaaattg 11456679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 216 - 352
Target Start/End: Complemental strand, 18978149 - 18978015
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||   ||||||| ||||| |||||| | || ||||||||||||||||||||||||||||||||||||| |||  |||||||| |||  ||||    
T  18978149 gtcaaaattggaaaaaaggatcaaagttgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacttagggggccaaaattgaaag-atttt 18978051  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaaa 352  Q
     |||||||| ||||| |||||||  || |||||||||    
T  18978050 gaaagttag-gggggaaaagtgctattaaacctaaaa 18978015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 216 - 344
Target Start/End: Complemental strand, 30335769 - 30335642
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||| ||||||||||||||||||||| | || |||||||| ||||  ||||||||| ||||||||||||  |   |||||||||||| |||||    
T  30335769 gtcaaaattgaacaaaaggaccaaagatgcaaaggggctaaatcttagggggttaaaattgtaatttttgtacttagcgagccaaaattgcaag-ttttt 30335671  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
    ||||||||  || || ||| |||||||||    
T  30335670 aaaagttaagggtggaaaaatgcacttta 30335642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 344
Target Start/End: Complemental strand, 8388592 - 8388467
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||  ||||||||||||| | ||||| | || |||||||| |||||||||||| |||||||||||| || |||   ||||||||||  |||||    
T  8388592 gtcaaaattgggcaaaaggaccaaaaacgcaaaggggctaaatcttagggggccaaaattatagtttttgtacatagggggctaaaattgcaa-cttttt 8388494  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
    |||||||  |||||| |||||||||||||    
T  8388493 aaaagtt--aggggggaaagtgcacttta 8388467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 324
Target Start/End: Complemental strand, 2378990 - 2378883
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||| ||||||||||||||||||||||  || | ||||||||||| ||||||| | |||||||||  || ||||||||||| | ||  |||||    
T  2378990 gtcaaaattgatcaaaaggaccaaagatgcaaataggctagatcttaaggggtcaaaattatggtttttgtatataggggatcaaaatcgtaa-cttttt 2378892  T
Q  316 aaaagttag 324  Q
    |||||||||    
T  2378891 aaaagttag 2378883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 352
Target Start/End: Complemental strand, 18971040 - 18970906
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||| | ||||||||||||| |||||| | |  ||||||| ||||| ||||||||||||||||||||||| |||  |||||||| |||  ||||    
T  18971040 gtcaaaattggcaaaaaggaccaaagttgcaaaggggttaaatcttcaggggtcaaaattgtagtttttgtacttagggggccaaaattgaaag-atttt 18970942  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaaa 352  Q
     |||||||| ||||| |||||||  || |||||||||    
T  18970941 gaaagttag-gggggaaaagtgctattaaacctaaaa 18970906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 216 - 291
Target Start/End: Original strand, 30336472 - 30336547
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtactta 291  Q
    |||||||||||||||||||||||||||||||||   || ||||||||  |||  ||||||||||||||||||||||    
T  30336472 gtcaaaattgaccaaaaggaccaaagatgcaaaatggctaaatcttagagggttaaaattgtagtttttgtactta 30336547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 353
Target Start/End: Complemental strand, 12352012 - 12351915
Alignment:
Q  255 aaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaaaat 353  Q
    |||||||| |||| ||||||||||||||||||||||| ||| ||||||||||||  ||||| |||||||  ||||| ||| ||||||||| ||| ||||    
T  12352012 aaatcttagggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaa-atttttgaaagttaagggggggaaaatgcactttagccttaaat 12351915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 320
Target Start/End: Original strand, 18488200 - 18488337
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    ||||||| | || ||||| ||||||||||| |  ||||||| ||  ||||||||||||||||||||| | |  | ||||||  |||||||||||||||||    
T  18488200 tacacatttggcatgccacgtaggcattgactg-gtcaaaactggtcaaaaggaccaaagatgcaaaggggttatatcttagagggccaaaattgtagtt 18488298  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaag 320  Q
    ||||||  || ||||  |||||||||| |||||||||||    
T  18488299 tttgtatataggggactaaaattgcaacttttttaaaag 18488337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 216 - 344
Target Start/End: Complemental strand, 11287906 - 11287779
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||||  |||| || ||||  |||||| |||  || ||||| ||||||||||||||||||| ||||||||  ||  ||||||||||||||||||    
T  11287906 gtcaaaattgataaaaatgatcaaaattgcaaaggagttaattcttagggggccaaaattgtagtttctgtacttagtgggccaaaattgcaagtttttt 11287807  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
     |||||||| || |  |||||||||||||    
T  11287806 -aaagttaggggtgaaaaagtgcacttta 11287779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 216 - 344
Target Start/End: Original strand, 12353332 - 12353457
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||||||||||| |  |||  |||||  | || |||||||| |||||||||||| ||||||| ||||||| |||  |||||||||||| |||||    
T  12353332 gtcaaaattgaccaaaagaattaaaattgcaatggggctaaatcttagggggccaaaattatagtttt-gtacttagggggccaaaattgcaag-ttttt 12353429  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
     ||||||| |||||| |||||||||||||    
T  12353430 gaaagtta-agggggaaaagtgcacttta 12353457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 10007380 - 10007427
Alignment:
Q  1 ttgacggtggagggaagttcggaatagatgtggttggattcttcttgg 48  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||    
T  10007380 ttgacggtggagggaagttcggaatcggtgtggttggattcttcttgg 10007427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 24359937 - 24359866
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgta 287  Q
    ||||||||||||||||  ||| ||||||||||||  || |||||||| |||| |||||||||||||||||||    
T  24359937 gtcaaaattgaccaaagtgactaaagatgcaaataggctaaatcttagggggtcaaaattgtagtttttgta 24359866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 349
Target Start/End: Complemental strand, 11282138 - 11282006
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||| ||||| || ||||  |||||| | |  |||||||| |||| |||||||||  ||||||||  || |||  ||||||||||| |||||     
T  11282138 gtcaaaattgatcaaaaagatcaaaattgcaaaggggttaaatcttagggggtcaaaattgtcatttttgtatatagggggccaaaattgcaacttttt- 11282040  T
Q  316 aaaagttagagggggtaaagtgcactttaaccta 349  Q
    ||||||||  ||||  ||||||||||||||||||    
T  11282039 aaaagttaagggggaaaaagtgcactttaaccta 11282006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 286
Target Start/End: Original strand, 34625161 - 34625241
Alignment:
Q  206 cattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgt 286  Q
    |||||| ||||||||||||||||||||||| ||||| ||| ||   |  ||||| || ||||| |||||||||||||||||    
T  34625161 cattgactaagtcaaaattgaccaaaaggatcaaagttgcgaagagggtaaatcatagggggctaaaattgtagtttttgt 34625241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 319
Target Start/End: Original strand, 5514236 - 5514344
Alignment:
Q  201 gtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtactta-agggatca 299  Q
    ||||||||||||||||||||||||         ||||||||||||||||| || |||| || || || ||||||||||||||||||| ||| | || | |    
T  5514236 gtaggcattgaataagtcaaaatt---------gaccaaagatgcaaatgggctaaat-tttagaggtcaaaattgtagtttttgtatttagaaggct-a 5514324  T
Q  300 aaattgcaagttttttaaaa 319  Q
    ||||||||||||||||||||    
T  5514325 aaattgcaagttttttaaaa 5514344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 303
Target Start/End: Complemental strand, 29043528 - 29043441
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaat 303  Q
    |||||||||| | ||||||| ||||||| |||| | || ||||||||  |||  ||||||||||||||||||| || ||| |||||||    
T  29043528 gtcaaaattgtctaaaaggatcaaagatacaaaggggctaaatcttagagggaaaaaattgtagtttttgtacatagggggtcaaaat 29043441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 342
Target Start/End: Original strand, 45114537 - 45114612
Alignment:
Q  266 ggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactt 342  Q
    ||||||||||||||||| ||||| ||  | | |||||||||||| ||||| |||||||| || || |||||||||||    
T  45114537 ggccaaaattgtagtttgtgtacatagtgaaccaaaattgcaag-tttttgaaagttaggggcggaaaagtgcactt 45114612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 175 - 350
Target Start/End: Original strand, 7501782 - 7501956
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | || | ||||||||||||||||||    
T  7501782 aattaattacacacgtggcctgccacgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctacatcttaaggggccaaaat 7501881  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaa 350  Q
    ||| |||||  |||||| |||  |||||||||||| ||||| |||||||||||||| ||||||||||||| |||||    
T  7501882 tgttgttttgatacttagggggccaaaattgcaag-tttttgaaagttagagggggaaaagtgcactttagcctaa 7501956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 175 - 344
Target Start/End: Complemental strand, 18371595 - 18371427
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| || ||| || |||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| || |||||||| |||||||||||    
T  18371595 aattaattatacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggatcaaagatgcaaatgtgctaaatcttagggggccaaaat 18371496  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    |||||||||||||||||||||  ||||||||||||| |||| ||||||||  |||| |||||||||||||    
T  18371495 tgtagtttttgtacttaaggggccaaaattgcaagt-ttttgaaagttaggaggggaaaagtgcacttta 18371427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 175 - 344
Target Start/End: Complemental strand, 7500625 - 7500458
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| ||||||  | |||||||| |||||| |||||||||||||||||||||||||||| |||||||||||| | || |||||||| |||||||||||    
T  7500625 aattaattacacacatggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggatcaaagatgcaaaggggctaaatcttagggggccaaaat 7500526  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    ||| |||| | ||||||  ||||||||||||||||| |||| ||||||| |||||| |||||||||||||    
T  7500525 tgtggtttctatacttagaggatcaaaattgcaagt-ttttgaaagtta-agggggaaaagtgcacttta 7500458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 175 - 349
Target Start/End: Complemental strand, 22629657 - 22629481
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || ||  |||| |||||| ||||||||||||||||||||||||||||||||||||||||| | || |||||||| |||||||||||    
T  22629657 aattaattacacacgtggcaggccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaat 22629558  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagtta--gagggggtaaagtgcactttaaccta 349  Q
    ||||||||||||||||| | |  ||||||| ||||||||| |||| | |  ||||||| ||| ||||||||| ||||    
T  22629557 tgtagtttttgtacttaggaggccaaaattacaagtttttgaaaattaagggagggggaaaaatgcactttagccta 22629481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 208 - 319
Target Start/End: Original strand, 18372420 - 18372531
Alignment:
Q  208 ttgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgca 307  Q
    |||||||||||||||||||||||||||||||||||| |||| | || |||||||| |||||||||||||||||||||||||||| |||  ||||||||||    
T  18372420 ttgaataagtcaaaattgaccaaaaggaccaaagatacaaaggggctaaatcttagggggccaaaattgtagtttttgtacttagggggccaaaattgca 18372519  T
Q  308 agttttttaaaa 319  Q
    ||||||| ||||    
T  18372520 agtttttgaaaa 18372531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 47369952 - 47369813
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || ||||||||  ||||| |||||||||||||||||||||||||  || ||||||||||| | || ||||||||||||||||||||    
T  47369952 aattaattacacacgtggcctgccacataggcgttgaataagtcaaaattgaccaaaataactaaagatgcaaaggggctaaatcttaaggggccaaaat 47369853  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    | ||||||||||||||| | |   ||||||||||||||||    
T  47369852 tatagtttttgtacttatgaggctaaaattgcaagttttt 47369813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 216 - 349
Target Start/End: Original strand, 42886257 - 42886389
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||| || |||||||||||||| || |||||||| ||||| |||||||||||||||||| ||| ||| ||||||||||||  |||||    
T  42886257 gtcaaaattgaccaaaatgatcaaagatgcaaatgggctaaatcttagggggctaaaattgtagtttttgtatttagggggtcaaaattgcaa-attttt 42886355  T
Q  316 aaaagttagagggggtaaagtgcactttaaccta 349  Q
     ||||||||  || | ||||||||||||||||||    
T  42886356 gaaagttaggaggagaaaagtgcactttaaccta 42886389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 208 - 350
Target Start/End: Original strand, 22630415 - 22630556
Alignment:
Q  208 ttgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgca 307  Q
    |||||||||||||||||||||||||||||||||||| ||||   ||  ||||||| ||||| |||||||||||||||||| ||| |||  ||||||||||    
T  22630415 ttgaataagtcaaaattgaccaaaaggaccaaagatacaaagaggctgaatcttagggggctaaaattgtagtttttgtaattagggggccaaaattgca 22630514  T
Q  308 agttttttaaaagttagagggggtaaagtgcactttaacctaa 350  Q
    || ||||| |||||||  | ||| ||||||||||||| |||||    
T  22630515 ag-tttttgaaagttatggagggaaaagtgcactttagcctaa 22630556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 216 - 344
Target Start/End: Complemental strand, 31659753 - 31659625
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||||||||||||| ||||  |||||  | || |||||||| |||||||||||||||||||||||||||| ||| ||||||||| ||| |||||    
T  31659753 gtcaaaattgaccaaaaggatcaaatttgcaatggggctaaatcttagggggccaaaattgtagtttttgtacttagggggtcaaaattgtaag-ttttt 31659655  T
Q  316 aaaagttagagggggt-aaagtgcacttta 344  Q
     |||||||| |||||| |||||||||||||    
T  31659654 gaaagttagggggggtaaaagtgcacttta 31659625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 216 - 313
Target Start/End: Original strand, 14999126 - 14999223
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttt 313  Q
    ||||||||||||| |||||| |||||||||||| | || |||||||| || ||||||||||||||||||||| ||| ||| |||||||||||||||||    
T  14999126 gtcaaaattgacctaaaggaacaaagatgcaaaggggctaaatcttagggcgccaaaattgtagtttttgtatttagggggtcaaaattgcaagtttt 14999223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 351
Target Start/End: Complemental strand, 31949452 - 31949318
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||| |||||||||||||| |||||  | || |||||||| |||| | ||||||| ||||| ||||||| |||  |||||||||||||||||     
T  31949452 gtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttg 31949353  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaa 351  Q
    |||| |||| | ||| ||||||||||||| ||||||    
T  31949352 aaaa-ttagggagggaaaagtgcactttagcctaaa 31949318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 350
Target Start/End: Complemental strand, 127465 - 127334
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||  |||||||||||||| ||||| || || |||||||| ||||| ||| |||| ||||| ||||||| |||| ||||||||||||| ||||    
T  127465 gtcaaaattggtcaaaaggaccaaagttgcaattgggctaaatcttagggggctaaa-ttgtggttttggtacttaggggaccaaaattgcaagt-tttt 127368  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaa 350  Q
     |||||||| ||||| ||||||||||||| |||||    
T  127367 gaaagttag-gggggaaaagtgcactttagcctaa 127334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 350
Target Start/End: Original strand, 3227565 - 3227698
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||| |||||||||||||| |||||  | || |||||||| |||  | ||||||| ||||| ||||||| |||  |||||||||||| |||||    
T  3227565 gtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgctaaattgtggttttggtacttagggggccaaaattgcaag-ttttt 3227663  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaa 350  Q
     |||||||| ||||| ||||||||||||| |||||    
T  3227664 gaaagttagggggggaaaagtgcactttagcctaa 3227698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 216 - 344
Target Start/End: Complemental strand, 3227237 - 3227111
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||  |||||||||||||| |||||  | || ||||||||||||| | ||||||| ||||| ||||||| |||  |||||||||||||||||     
T  3227237 gtcaaaattgttcaaaaggaccaaagttgcaatggggctaaatcttaagggggctaaattgtggttttggtacttagggggccaaaattgcaagtttttg 3227138  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
    |||| |||| ||||| |||||||||||||    
T  3227137 aaaa-ttag-ggggggaaagtgcacttta 3227111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 216 - 344
Target Start/End: Complemental strand, 17781791 - 17781664
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||  |||||||||||||| |||||  | || |||||||| ||||   ||||||| ||||| ||||||| ||| |||||||||||||| ||||    
T  17781791 gtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagt-tttt 17781693  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
     |||||||| ||||| |||||||||||||    
T  17781692 gaaagttagggggggaaaagtgcacttta 17781664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 195 - 319
Target Start/End: Complemental strand, 46482748 - 46482624
Alignment:
Q  195 tgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagg 294  Q
    ||||| |||||||||||||||||||||||||||||||||||  ||| ||||||| |||  |||||||| |||   |||||| |||||||||||| || ||    
T  46482748 tgccacgtaggcattgaataagtcaaaattgaccaaaaggataaaaaatgcaaaggagataaatcttaggggattaaaattatagtttttgtacataggg 46482649  T
Q  295 gatcaaaattgcaagttttttaaaa 319  Q
    | ||||| || ||| ||||| ||||    
T  46482648 ggtcaaatttacaaatttttgaaaa 46482624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 47525304 - 47525465
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    ||||||||| || |||||| |  || |||| || ||||||||||  |||||||||||||| |||||  | || |||||||| |||| | ||||||| |||    
T  47525304 tacacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggtt 47525403  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    ||  |||||| |||   ||||||||||| ||||| |||||||||||||| |||||||||||||    
T  47525404 ttgatacttagggggctaaaattgcaag-tttttgaaagttagagggggaaaagtgcacttta 47525465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 21505542 - 21505473
Alignment:
Q  218 caaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgta 287  Q
    |||||||| |||||||||||||||||||||| | || |||||||| |||| |||||||||||||||||||    
T  21505542 caaaattgtccaaaaggaccaaagatgcaaaggggctaaatcttatggggtcaaaattgtagtttttgta 21505473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 7500939 - 7500892
Alignment:
Q  1 ttgacggtggagggaagttcggaatagatgtggttggattcttcttgg 48  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7500939 ttgacggtggagggaagttcggaatcgatgtggttggattcttcttgg 7500892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 219 - 278
Target Start/End: Complemental strand, 14998107 - 14998048
Alignment:
Q  219 aaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgta 278  Q
    |||||||||||||||||||||||||||||| | || |||||||| |||||||||||||||    
T  14998107 aaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaattgta 14998048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 349
Target Start/End: Original strand, 17782563 - 17782656
Alignment:
Q  255 aaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    |||||||| |||| | ||||||| ||||| ||||||| |||  |||||||||||| ||||| |||||||||||||| ||||||||||||| ||||    
T  17782563 aaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaag-tttttgaaagttagagggggaaaagtgcactttagccta 17782656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 349
Target Start/End: Original strand, 31949773 - 31949905
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||| |||||||||||||| |||||  | || |||||||| |||  | ||||||| ||||| ||| ||| |||  |||||||||||| |||||    
T  31949773 gtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggtgctaaattgtggttttggtatttagggggccaaaattgcaag-ttttt 31949871  T
Q  316 aaaagttagagggggtaaagtgcactttaaccta 349  Q
     |||||||| ||||| | ||||||||||| ||||    
T  31949872 gaaagttagggggggaagagtgcactttagccta 31949905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 348
Target Start/End: Original strand, 43900445 - 43900589
Alignment:
Q  201 gtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaa 300  Q
    |||||| |||||||| | |||||||| |||||||| ||||||||||||||||  |||| ||  |||| ||||| |||||||||| || ||| || | |||    
T  43900445 gtaggcgttgaataaattaaaattgatcaaaaggatcaaagatgcaaatgagataaat-ttttgggggcaaaactgtagtttttatatttagggaaccaa 43900543  T
Q  301 aattgcaagttttttaaaagttagagggggtaaagtgcactttaacct 348  Q
    |||| |||  |||||||||||||||  | | |||||||||||||||||    
T  43900544 aattacaa-atttttaaaagttaga-agagaaaagtgcactttaacct 43900589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 48933758 - 48933699
Alignment:
Q  255 aaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||||  ||||||||||||||||||   |||||||||||||||||||||||||    
T  48933758 aaatcttaagggatcaaaattgtagtttttgtttataagggatcaaaattgcaagttttt 48933699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 327
Target Start/End: Complemental strand, 6618371 - 6618227
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaa-tcttaaggggccaaaattgtagt 280  Q
    ||||||||| || |||||  ||||| |||| || ||||||||||| ||||| || ||||  ||||| |||| |||| ||||| || | |||||||||| |    
T  6618371 tacacatgtggcatgccacataggcgttgactaggtcaaaattgatcaaaatgatcaaatttgcaa-tgaggcaaaatcttagggagtcaaaattgtaat 6618273  T
Q  281 ttttgtacttaagggatcaaaattgcaagttttttaaaagttagagg 327  Q
    |||| || |||||| |||||||||||||| |||| ||||||||||||    
T  6618272 ttttatatttaaggaatcaaaattgcaag-ttttgaaaagttagagg 6618227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 353
Target Start/End: Original strand, 34352796 - 34352893
Alignment:
Q  255 aaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaaaat 353  Q
    ||||||||  ||||||||||| |||||| ||||||||||||| |||||| | |||||||| |||| ||||||| |  ||||||||||||| ||| ||||    
T  34352796 aaatcttagagggccaaaattatagtttatgtacttaagggaccaaaatagaaagtttttgaaaa-ttagaggtgaaaaagtgcactttagccttaaat 34352893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 216 - 344
Target Start/End: Complemental strand, 769543 - 769416
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||  |||||||| |||||||||||||| |  || ||| | || ||||||||| || |||||||||||| |   ||||||||||||||||||     
T  769543 gtcaaaattgggcaaaaggatcaaagatgcaaatgggttaattctaagggagccaaaattataatttttgtacttaggatgtcaaaattgcaagtttttg 769444  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
    |||| ||| ||| || ||| |||||||||    
T  769443 aaaa-ttacaggtggaaaattgcacttta 769416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 208 - 352
Target Start/End: Original strand, 30439321 - 30439463
Alignment:
Q  208 ttgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgca 307  Q
    |||| |||||||||||||| ||||| |||| ||| |||||| | || |||||||| ||| | |||||||||||||||| || || |  |||||||| | |    
T  30439321 ttgactaagtcaaaattgagcaaaatgaccgaaggtgcaaaggggctaaatcttaggggactaaaattgtagtttttgaacataggaaatcaaaatcgta 30439420  T
Q  308 agttttttaaaagttagagggggtaaagtgcactttaacctaaaa 352  Q
    |  ||||| ||||||| |||||  ||||||||||||| |||||||    
T  30439421 a-ctttttgaaagtta-aggggagaaagtgcactttagcctaaaa 30439463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 344
Target Start/End: Original strand, 31661034 - 31661107
Alignment:
Q  270 aaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    |||||| |||||||||||| ||| || ||||||||||||  ||||| |||||||||| ||| |||||||||||||    
T  31661034 aaaattatagtttttgtacgtaaagggtcaaaattgcaa-atttttgaaagttagagaggggaaagtgcacttta 31661107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 314
Target Start/End: Complemental strand, 43899584 - 43899478
Alignment:
Q  208 ttgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgca 307  Q
    |||| ||||||||||||| |||||| || |||||||| ||||| || || | |||  | |||||||||||| ||||| || |||   |||||||||||||    
T  43899584 ttgactaagtcaaaattggccaaaaagatcaaagatgtaaatgtgctaatttttagagagccaaaattgtaatttttatatttagaagatcaaaattgca 43899485  T
Q  308 agttttt 314  Q
    |||||||    
T  43899484 agttttt 43899478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 348
Target Start/End: Original strand, 128612 - 128703
Alignment:
Q  256 aatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacct 348  Q
    ||||||| |||| | ||||||| ||||| ||||||| ||| ||||||||||||  ||||| |||||||  | ||| |||||||||||||||||    
T  128612 aatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaa-atttttgaaagttatggtgggaaaagtgcactttaacct 128703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 340
Target Start/End: Complemental strand, 47524599 - 47524532
Alignment:
Q  272 aattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcac 340  Q
    |||||| ||||| ||||||| |||  ||||||||||||| |||| |||||||||||||| |||||||||    
T  47524599 aattgtggttttggtacttagggggccaaaattgcaagt-ttttgaaagttagagggggaaaagtgcac 47524532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 770732 - 770791
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaatt 275  Q
    ||||||||||||||||| || |||||||||||| | || |||| ||| ||||||||||||    
T  770732 gtcaaaattgaccaaaatgatcaaagatgcaaaggggctaaattttagggggccaaaatt 770791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 276
Target Start/End: Original strand, 21508402 - 21508464
Alignment:
Q  214 aagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattg 276  Q
    |||| |||||||||||||| || |||||||||||||  || ||||||||  ||||||||||||    
T  21508402 aagttaaaattgaccaaaaagatcaaagatgcaaattggctaaatcttagagggccaaaattg 21508464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 350
Target Start/End: Original strand, 46483551 - 46483611
Alignment:
Q  288 cttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaa 350  Q
    |||| |||||||||||| ||||||||| |||||||| |||||  |||||||||||||||||||    
T  46483551 cttaggggatcaaaattacaagttttt-aaaagttaaagggga-aaagtgcactttaacctaa 46483611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 46483476 - 46483532
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaa 231  Q
    |||||| |||||| ||  ||||||| ||||||||| |||||||||||| ||||||||    
T  46483476 aattaattacacacgtgccctgccaggtaggcattaaataagtcaaaaatgaccaaa 46483532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 5e-44; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 175 - 345
Target Start/End: Complemental strand, 12129794 - 12129625
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || |||||||| |||||| ||||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||| ||||||    
T  12129794 aattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgatcaaaatgaccaaagatgcaaatgggctaaatcttaaggggtcaaaat 12129695  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaa 345  Q
    ||||||||||||||||| |||  ||||||||||||| |||| |||||||   |||| ||||||||||||||    
T  12129694 tgtagtttttgtacttacggggccaaaattgcaagt-ttttgaaagttaagaggggaaaagtgcactttaa 12129625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 216 - 344
Target Start/End: Original strand, 31600956 - 31601083
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||||| ||||||| ||||| |||||||| || ||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  31600956 gtcaaaattgacaaaaaggatcaaagttgcaaatgggctaaatcttaaggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaag-ttttt 31601054  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
    ||||||||||||||  |||||||||||||    
T  31601055 aaaagttagaggggaaaaagtgcacttta 31601083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 216 - 344
Target Start/End: Complemental strand, 1834250 - 1834122
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatctta-aggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||  ||||||||||||||||||||| ||| || ||| ||||||||| ||||||||    
T  1834250 gtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttaggggggccaaaattgtagtttttatacatagggggtcaaaattgtaagttttt 1834151  T
Q  315 taaaagttagagggggtaaagtgcacttta 344  Q
    | |||||||||||||| |||||||||||||    
T  1834150 t-aaagttagagggggaaaagtgcacttta 1834122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 175 - 352
Target Start/End: Complemental strand, 8155908 - 8155733
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || |||||| | |||||| |||||||||||||| |||||||||| ||| |||||||||||   || |||||||| |||||||||||    
T  8155908 aattaattacacacgtggcctgctacgtaggcgttgaataagtcaaagttgaccaaaatgactaaagatgcaaagcggctaaatcttagggggccaaaat 8155809  T
Q  275 tgtagtttttgtacttaagggatc-aaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaaaa 352  Q
    ||||||||||| ||||| |||| | ||||||||||| ||||| ||||||  |||||| ||||||||||||||| |||||    
T  8155808 tgtagtttttgaacttaggggagctaaaattgcaag-tttttgaaagtt--agggggaaaagtgcactttaacataaaa 8155733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 175 - 350
Target Start/End: Original strand, 1290128 - 1290302
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| ||||||||| || |||||  ||||| |||| |  ||||||||||||||||||||||||||||||||| | |  |||||||| ||||| |||||    
T  1290128 aattaattacacatgtggcatgccacttaggcgttgactcggtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagggggctaaaat 1290227  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaa 350  Q
    |||||||||||||||||  ||  ||||||||||||  |||| |||||||  ||||| ||||||||||||| |||||    
T  1290228 tgtagtttttgtacttagagggccaaaattgcaag-attttgaaagttaaggggggaaaagtgcactttagcctaa 1290302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 216 - 342
Target Start/End: Complemental strand, 31599919 - 31599794
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||| | ||||||| ||||| |||||| | || |||||||| ||| |||||||||||||||||||||||| ||| |||||||||||||| ||||    
T  31599919 gtcaaaattggcaaaaaggatcaaagttgcaaaggggctaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaagt-tttt 31599821  T
Q  316 aaaagttagagggggtaaagtgcactt 342  Q
    ||||||||| ||||  |||||||||||    
T  31599820 aaaagttaggggggaaaaagtgcactt 31599794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 214 - 349
Target Start/End: Original strand, 1835071 - 1835205
Alignment:
Q  214 aagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttt 313  Q
    |||||||||||| | |||||||||||||||||||| | || |||||||| |||| |||||||||||||||  |||||| ||| ||||||||||||| |||    
T  1835071 aagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaag-ttt 1835169  T
Q  314 ttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    || |||||||| |  || ||||||||||||| ||||    
T  1835170 ttgaaagttagggatggaaaagtgcactttagccta 1835205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 217 - 348
Target Start/End: Original strand, 8758809 - 8758939
Alignment:
Q  217 tcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttta 316  Q
    |||||||||||||||||||  |||  |||||  |||| |||||||||||||||||||||||||||| |||||||| |||  |||||||||||| |||||     
T  8758809 tcaaaattgaccaaaaggattaaaattgcaatggagctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaag-tttttg 8758907  T
Q  317 aaagttagagggggtaaagtgcactttaacct 348  Q
    |||||||  ||||| |||||||| ||||||||    
T  8758908 aaagttaaggggggaaaagtgcattttaacct 8758939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 349
Target Start/End: Complemental strand, 13386180 - 13386012
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagcc-aaatcttaaggggcca-aaattgtag 279  Q
    ||||||||| || |||||| |  || |||| || ||||||||||| |||||||||||||| ||||| |||| | |||||||| ||||  | ||||||| |    
T  13386180 tacacatgtggcatgccatatcagcgttgactaggtcaaaattgatcaaaaggaccaaagttgcaa-tgaggctaaatcttagggggggataaattgtgg 13386082  T
Q  280 tttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    |||| ||||||| |||  |||||||||||||||||| |||||||||||||| ||||||||||||| ||||    
T  13386081 ttttggtacttagggggccaaaattgcaagttttttgaaagttagagggggaaaagtgcactttagccta 13386012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 352
Target Start/End: Complemental strand, 1289227 - 1289092
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||||||||||||||||||  | |  |||||||||| ||| ||||||||||||||| ||||||  ||||||||||| |||  | |||    
T  1289227 gtcaaaattgaccaaaaggaccaaagatgcaagggggttaaatcttaagaggctaaaattgtagtttttatacttagaggatcaaaattacaa-atattt 1289129  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaaa 352  Q
     |||||||  ||||| ||||| |||||||||||||||    
T  1289128 gaaagttaaggggggaaaagttcactttaacctaaaa 1289092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 182 - 350
Target Start/End: Original strand, 25685759 - 25685926
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    ||||||||| || |||||| |  || |||| || ||||||||||  |||||||||||||| |||||  | || |||||||| |||| | ||||||| |||    
T  25685759 tacacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttagggggtctaaattgtggtt 25685858  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaa 350  Q
    || ||||||| |||  |||||||||||| ||||| |||||||||||||| ||||||||||||| |||||    
T  25685859 ttggtacttagggggccaaaattgcaag-tttttgaaagttagagggggaaaagtgcactttagcctaa 25685926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 182 - 349
Target Start/End: Original strand, 17388148 - 17388313
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    |||||| || ||||||||| ||||| ||||  ||||||||||||||| ||||||| |    || ||| | || || ||||  ||||||||||||||||||    
T  17388148 tacacacgtggcctgccatataggcgttgaccaagtcaaaattgacctaaaggactactattgtaaaggggctaattcttggggggccaaaattgtagtt 17388247  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    | ||||||||||||| |||||||||||| ||||| |||||||| ||||| ||||||||||||| ||||    
T  17388248 tatgtacttaagggaccaaaattgcaag-tttttgaaagttag-gggggaaaagtgcactttagccta 17388313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 228 - 350
Target Start/End: Complemental strand, 48780366 - 48780245
Alignment:
Q  228 caaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagg 327  Q
    |||||||||||||| |||||  | || |||||||| |||| | ||||||| ||||| ||||||| ||| |||||||||||||| ||||||||||||| ||    
T  48780366 caaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagt-ttttaaaagttagggg 48780268  T
Q  328 gggtaaagtgcactttaacctaa 350  Q
    ||| ||||||||||||| |||||    
T  48780267 gggaaaagtgcactttagcctaa 48780245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 216 - 353
Target Start/End: Original strand, 19750546 - 19750681
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||| |||||||||||| ||||  |||||  | || |||||||| ||||  |||||||||||||||||||||| |||  |||||||||||| |||||    
T  19750546 gtcaaaagtgaccaaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaag-ttttt 19750644  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaaat 353  Q
    ||||||||| ||||| |||||||||||||  |||||||    
T  19750645 aaaagttag-gggggaaaagtgcactttagtctaaaat 19750681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 216 - 353
Target Start/End: Complemental strand, 19789260 - 19789125
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||| |||||||||||| ||||  |||||  | || |||||||| ||||  |||||||||||||||||||||| |||  ||||||||||||| ||||    
T  19789260 gtcaaaagtgaccaaaaggatcaaatttgcaatggggctaaatcttaggggggtaaaattgtagtttttgtacttagggggccaaaattgcaagt-tttt 19789162  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaaat 353  Q
    ||||||||| ||||| |||||||||||||  |||||||    
T  19789161 aaaagttag-gggggaaaagtgcactttagtctaaaat 19789125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 216 - 353
Target Start/End: Original strand, 37728536 - 37728671
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||||| ||||||| ||||||||||||  ||| ||||||||| ||| |||||||||||||||||||| || | |  |||||||||||  |||||    
T  37728536 gtcaaaattgactaaaaggatcaaagatgcaaagaagctaaatcttaaagggtcaaaattgtagtttttgtacataggaggccaaaattgcaa-cttttt 37728634  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaaat 353  Q
    ||||||||| | ||  ||| ||||||||||||||||||    
T  37728635 aaaagttag-gaggaaaaaatgcactttaacctaaaat 37728671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 216 - 349
Target Start/End: Original strand, 49307999 - 49308129
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||| ||||||||||||||||  | | || ||||| || ||||| |||||||||||||||||||||| |||  |||||||||||| |||||    
T  49307999 gtcaaaattgacccaaaggaccaaagatgcgcaggggcaaaatcatagggggc-aaaattgtagtttttgtacttagggggccaaaattgcaag-ttttt 49308096  T
Q  316 aaaagttagagggggtaaagtgcactttaaccta 349  Q
     |||||||| ||||| ||||||||||||| ||||    
T  49308097 gaaagttag-gggggaaaagtgcactttagccta 49308129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 344
Target Start/End: Complemental strand, 25685064 - 25684937
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||| |||||||||||||| |||||  | || |||||||| |||| | ||||||| ||||| |||||||  || |||||||||||||| ||||    
T  25685064 gtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagagggtcaaaattgcaagt-tttt 25684966  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
     |||||||| ||||| |||||||||||||    
T  25684965 gaaagttagggggggaaaagtgcacttta 25684937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 194 - 349
Target Start/End: Complemental strand, 17383144 - 17382991
Alignment:
Q  194 ctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaag 293  Q
    ||||||| ||||| ||||  ||||||||||||||| ||||||| |    |||||| | |  || ||||  ||||||||||||||||||||||||||||||    
T  17383144 ctgccatataggcgttgaccaagtcaaaattgacctaaaggactactattgcaaaggggataattcttggggggccaaaattgtagtttttgtacttaag 17383045  T
Q  294 ggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    ||| ||||||||||||| |||| |||||||| ||| | ||||||||||||| ||||    
T  17383044 ggaccaaaattgcaagt-ttttgaaagttag-gggagaaaagtgcactttagccta 17382991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 255 - 350
Target Start/End: Original strand, 26421632 - 26421725
Alignment:
Q  255 aaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaa 350  Q
    ||||||||||||| ||||||||||||||||||||||| | | ||||||||||||| ||||| ||||||||| |||| ||||||||||||| |||||    
T  26421632 aaatcttaaggggtcaaaattgtagtttttgtacttaggaggtcaaaattgcaag-tttttgaaagttaga-ggggaaaagtgcactttagcctaa 26421725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 216 - 351
Target Start/End: Original strand, 13509330 - 13509463
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||| ||||||||| ||||| |||||| | || |||||||| |||  |||||||||||||||  |||||  |||  ||||||||||| ||||||    
T  13509330 gtcaaaattggccaaaaggagcaaaggtgcaaaggggctaaatcttaggggatcaaaattgtagttttcatacttggggggccaaaattgcaa-tttttt 13509428  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaa 351  Q
    ||||||||| ||||| ||||| ||||||| ||||||    
T  13509429 aaaagttag-gggggaaaagtacactttagcctaaa 13509463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 344
Target Start/End: Complemental strand, 10447170 - 10447009
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    |||||| || || ||||| ||||||||||| |  || ||||||  |||||||||||||||||||||| | || |||||||| ||||  |||||||| |||    
T  10447170 tacacacgtggcgtgccacgtaggcattgactg-gttaaaattagccaaaaggaccaaagatgcaaaggggctaaatcttaggggggtaaaattgtggtt 10447072  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    ||||||| || |||   |||||||||| ||||| |||  | |||||||| |||||||||||||    
T  10447071 tttgtacatagggggctaaaattgcaactttttgaaacttaagagggggaaaagtgcacttta 10447009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 288
Target Start/End: Original strand, 10448198 - 10448303
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    |||||| || || ||||| ||||||||||| |  |||||||||| |||||||||||||||||||||| | || | ||||||  |||||||||||||||||    
T  10448198 tacacacgtggcatgccacgtaggcattgactg-gtcaaaattggccaaaaggaccaaagatgcaaaggggctatatcttagagggccaaaattgtagtt 10448296  T
Q  282 tttgtac 288  Q
    |||||||    
T  10448297 tttgtac 10448303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 344
Target Start/End: Original strand, 10471325 - 10471486
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    ||||||||| || |||||| |  || |||| || ||||||||||  |||||||||||||| |||||  | || |||||||| |||| | ||||||| |||    
T  10471325 tacacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggtt 10471424  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    || ||||||| |||  |||||||||||| ||||| |||||||  ||||| |||||||||||||    
T  10471425 ttggtacttagggggccaaaattgcaag-tttttgaaagttaaggggggaaaagtgcacttta 10471486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 345
Target Start/End: Original strand, 35935504 - 35935632
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagcc-aaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||||||| |||||||||  |||| ||||| |||| | |||||||| ||||||||||||||||||| |||||||| |||   ||||||||||  ||||    
T  35935504 gtcaaaattggccaaaaggattaaagttgcaa-tgaggctaaatcttagggggccaaaattgtagtttatgtacttagggggctaaaattgcaa-atttt 35935601  T
Q  315 taaaagttagagggggtaaagtgcactttaa 345  Q
    |||||||||  ||||| ||||||||||||||    
T  35935602 taaaagttaagggggggaaagtgcactttaa 35935632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 344
Target Start/End: Original strand, 50909643 - 50909771
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaa-ggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||| ||||||||||||||||||||| | || ||||||||| |||| |||||||||||||||| ||| || ||  ||||||| ||||  ||||    
T  50909643 gtcaaaattgatcaaaaggaccaaagatgcaaaggggctaaatcttaagggggtcaaaattgtagtttttatacatagggagtcaaaatcgcaa-ctttt 50909741  T
Q  315 taaaagttagagggggtaaagtgcacttta 344  Q
    ||||| |||| | ||  |||||||||||||    
T  50909742 taaaacttagggtggaaaaagtgcacttta 50909771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 344
Target Start/End: Complemental strand, 10470676 - 10470549
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||| |||||||||||||| |||||  | || |||||||| |||| | |||||||  |||| |||||||  || |||||||||||||| ||||    
T  10470676 gtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtgattttggtacttagagggtcaaaattgcaagt-tttt 10470578  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
     |||||||  ||||| |||||||||||||    
T  10470577 gaaagttaaggggggaaaagtgcacttta 10470549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 314
Target Start/End: Complemental strand, 5525489 - 5525391
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||  |||||||||||||| |||||  | || |||||||| |||| | ||||||| ||||| ||||||| ||| ||||||||||||||||||    
T  5525489 gtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagttttt 5525391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 350
Target Start/End: Complemental strand, 8757804 - 8757672
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||||||  |||  |||||  | || |||||||||||| ||||||||||||||| |||||||| |||   ||||||| ||| |||||    
T  8757804 gtcaaaattgaccaaaaggattaaaattgcaatggggctaaatcttaagggtccaaaattgtagtttctgtacttagggggctaaaattgtaag-ttttt 8757706  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaa 350  Q
     ||||||| |||||  ||||||||||||| |||||    
T  8757705 gaaagtta-aggggaaaaagtgcactttagcctaa 8757672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 344
Target Start/End: Complemental strand, 35934492 - 35934347
Alignment:
Q  195 tgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagg 294  Q
    ||||| ||||||||||| |  |||||||||||||||||| |  |||| |||||  | || ||||||||||||||||||||| || ||| | |||||| ||    
T  35934492 tgccacgtaggcattgactg-gtcaaaattgaccaaaagaattaaagttgcaatggggctaaatcttaaggggccaaaattataatttctttacttaggg 35934394  T
Q  295 gatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    || ||||||| |||| ||||| ||||||  |||||| |||||||||||||    
T  35934393 gaccaaaattacaag-tttttgaaagtt--agggggaaaagtgcacttta 35934347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 314
Target Start/End: Original strand, 52491578 - 52491676
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||||||||||||  |||| |||||  | || |||| ||| ||||||||||||||||||| |||| |||  ||| |||||||||||||||||    
T  52491578 gtcaaaattgaccaaaaggattaaagttgcaatggggctaaattttagggggccaaaattgtagtttctgtatttagaggaccaaaattgcaagttttt 52491676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 344
Target Start/End: Original strand, 13386503 - 13386631
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||  |||||||||||||| |||||  | || | |||||| |||| | ||||||| ||||| ||||||| ||| ||||||||||||| |||||    
T  13386503 gtcaaaattggtcaaaaggaccaaagttgcaatggggctagatcttaggggggctaaattgtggttttggtacttatggggtcaaaattgcaag-ttttt 13386601  T
Q  316 aaaagttagaggggg-taaagtgcacttta 344  Q
     |||||||| |||||  |||||||||||||    
T  13386602 gaaagttagggggggaaaaagtgcacttta 13386631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 215 - 352
Target Start/End: Complemental strand, 21178127 - 21177992
Alignment:
Q  215 agtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||| | |||| || ||||| |||||| | || |||| ||| |||| |||||||||||||||||| | || ||||||||||||||||  |||     
T  21178127 agtcaaaattggcaaaaatgatcaaagttgcaaaagggctaaattttagggggtcaaaattgtagtttttgttcataggggatcaaaattgcaa-cttta 21178029  T
Q  315 taaaagttagagggggtaaagtgcactttaacctaaaa 352  Q
    | |||||||| ||||| ||||| ||||||| |||||||    
T  21178028 tgaaagttag-ggggggaaagtacactttagcctaaaa 21177992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 219 - 319
Target Start/End: Complemental strand, 33296350 - 33296250
Alignment:
Q  219 aaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaa 318  Q
    |||||||||||||| || ||||||||||||||||| ||||  || ||| |||||||| |||||||| |||||| | || |||||||  |||||||| |||    
T  33296350 aaaattgaccaaaatgatcaaagatgcaaatgagctaaattataggggaccaaaattatagtttttatacttaggagaccaaaattataagtttttgaaa 33296251  T
Q  319 a 319  Q
    |    
T  33296250 a 33296250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 352
Target Start/End: Original strand, 55603550 - 55603636
Alignment:
Q  264 ggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaaaa 352  Q
    ||||||||||| |||||||||||||  | ||||| ||||||||||| ||||| ||||||| |||||  |||||||||||||||||||||    
T  55603550 ggggccaaaatagtagtttttgtacacaggggattaaaattgcaag-tttttgaaagtta-aggggaaaaagtgcactttaacctaaaa 55603636  T

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Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 349
Target Start/End: Original strand, 5526063 - 5526228
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    ||||||||| || |||||| |  || |||| || ||||||||||  |||||||||||||  |||||  | || |||||||| |||| | ||||||| |||    
T  5526063 tacacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaaattgcaatggggctaaatcttaggggggctaaattgtggtt 5526162  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    ||  |||||| |||  |||||||||||| ||||| ||||||||| |||| ||||||||||||| ||||    
T  5526163 ttgttacttagggggccaaaattgcaag-tttttgaaagttaga-ggggaaaagtgcactttagccta 5526228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 239 - 319
Target Start/End: Original strand, 21539065 - 21539145
Alignment:
Q  239 aagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaa 319  Q
    |||||||||| |||| |||||||| |||| ||||||||||||||||  ||||| | |  ||||||||||||||||| ||||    
T  21539065 aagatgcaaaggagctaaatcttagggggtcaaaattgtagtttttacacttaggaggccaaaattgcaagtttttaaaaa 21539145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 228 - 344
Target Start/End: Original strand, 48781029 - 48781143
Alignment:
Q  228 caaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagg 327  Q
    ||||| |||||||| |||||  | || |||| ||| |||| | ||||||| ||||| ||||||| |||| ||||||||||| ||||| ||| ||||||||    
T  48781029 caaaatgaccaaagttgcaatggggctaaattttaggggggctaaattgtggttttagtactta-gggaccaaaattgcaaatttttgaaa-gttagagg 48781126  T
Q  328 gggtaaagtgcacttta 344  Q
    ||| |||||||||||||    
T  48781127 gggaaaagtgcacttta 48781143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 314
Target Start/End: Complemental strand, 49306903 - 49306806
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaa-tgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||||||||  |||||||||||||||||||| ||| | ||||| ||  |||| |||||||||||||||||||||||  |  |||||||||||||||||    
T  49306903 gtcaaaattgataaaaaggaccaaagatgcaaaatga-ctaaatcatattgggc-aaaattgtagtttttgtacttaaatggccaaaattgcaagttttt 49306806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 344
Target Start/End: Complemental strand, 3927798 - 3927669
Alignment:
Q  214 aagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttt 313  Q
    |||||||||||| ||||||||||  || ||||||||| || ||| | ||  || ||||||||||||||||  ||| |  |||  |||||| ||||  |||    
T  3927798 aagtcaaaattgcccaaaaggactgaaaatgcaaatgggctaaaacatagaggaccaaaattgtagttttcatacatggggggccaaaatcgcaacattt 3927699  T
Q  314 ttaaaagttagagggggtaaagtgcacttta 344  Q
    | ||||||||||||||| |||||||||||||    
T  3927698 t-aaaagttagagggggaaaagtgcacttta 3927669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 314
Target Start/End: Original strand, 46638696 - 46638794
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||| ||||| ||| |||| |||||| |  | |||||||| ||||| ||||||||| ||||||| | || |||||||||||| ||| |||||    
T  46638696 gtcaaaattgatcaaaaagactaaagttgcaaagggactaaatcttagggggctaaaattgtaatttttgttcataggggatcaaaattccaacttttt 46638794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 258 - 351
Target Start/End: Complemental strand, 1963284 - 1963192
Alignment:
Q  258 tcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaaa 351  Q
    ||||| ||||| ||||||||||||||||||| || | |  |||||||||||  ||||| |||||||  ||||| ||||||||||||| ||||||    
T  1963284 tcttagggggctaaaattgtagtttttgtacataggaggccaaaattgcaa-ctttttgaaagttaaggggggaaaagtgcactttagcctaaa 1963192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 318
Target Start/End: Original strand, 54110608 - 54110701
Alignment:
Q  225 gaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaa 318  Q
    ||||| ||| ||||||||||||| ||||| |||| ||| ||||| |||||| || ||||||||| |  | | |||||||||||| |||||||||    
T  54110608 gaccagaagaaccaaagatgcaattgagctaaattttagggggctaaaattataatttttgtacattggaggtcaaaattgcaaattttttaaa 54110701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 37727826 - 37727755
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagcc-aaatcttaaggggccaaaattgtagtttttgta 287  Q
    |||||||||||| |||| |||||||||| |||| ||| | |||||||||||||  ||||||||||||||||||    
T  37727826 gtcaaaattgactaaaatgaccaaagatacaaa-gagactaaatcttaaggggttaaaattgtagtttttgta 37727755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 344
Target Start/End: Original strand, 1964454 - 1964539
Alignment:
Q  258 tcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    ||||||||| ||||||||||||||||||| | || |||  |||||||| ||  |||||||||||||  || || |||||||||||||    
T  1964454 tcttaagggaccaaaattgtagtttttgttcatagggggccaaaattgtaa-ctttttaaaagttaagggtggaaaagtgcacttta 1964539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 314
Target Start/End: Complemental strand, 50909388 - 50909304
Alignment:
Q  229 aaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||||||||||||||| | |||||||| | ||  ||||||||||||||| ||  || | | |||||||||||| |||||    
T  50909388 aaaaggaccaaagatgcaaatga-ctaaatcttaggaggttaaaattgtagtttttatatataggaggtcaaaattgcaacttttt 50909304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 175 - 344
Target Start/End: Complemental strand, 19753082 - 19752915
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||  | || ||||| || |||||||||||    
T  19753082 aattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaatggggctaaatcatagggggccaaaat 19752983  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    ||||||||||||||||| |||  ||||||||||||| |||| |||||||| ||||| |||||||||||||    
T  19752982 tgtagtttttgtacttagggggccaaaattgcaagt-ttttgaaagttag-gggggaaaagtgcacttta 19752915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 175 - 349
Target Start/End: Original strand, 18486832 - 18487005
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| | || |||||||| |||||||||||    
T  18486832 aattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaat 18486931  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    ||| |||| | |||||| |||  |||||||||||| ||||| |||||||  ||||| ||||||||||||| ||||    
T  18486932 tgtggtttctatacttagggggccaaaattgcaag-tttttgaaagttaagggggggaaagtgcactttagccta 18487005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 201 - 348
Target Start/End: Original strand, 2686357 - 2686505
Alignment:
Q  201 gtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagcc-aaatcttaaggggccaaaattgtagtttttgtacttaagggatca 299  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||| |||| | ||||| || ||| |||||||| ||||||||||||||||| |||||    
T  2686357 gtaggcgttgaataagtcaaaattgatcaaaaggaccaaagatgcaa-tgaggctaaatcataggggaccaaaattatagtttttgtacttaagagatca 2686455  T
Q  300 aaattgcaagttttttaaaagttagag--ggggtaaagtgcactttaacct 348  Q
    |||||||||| ||||||||||||||||  |||| |||||||||||||||||    
T  2686456 aaattgcaag-tttttaaaagttagaggagggggaaagtgcactttaacct 2686505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 217 - 349
Target Start/End: Complemental strand, 25055541 - 25055410
Alignment:
Q  217 tcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttta 316  Q
    |||||||||| ||||||||||||||||||||||| || |||||||| ||||||||||||||||||||| ||| || |||||||||||||||||   |||     
T  25055541 tcaaaattgatcaaaaggaccaaagatgcaaatgggctaaatcttagggggccaaaattgtagtttttatacataggggatcaaaattgcaagaagttt- 25055443  T
Q  317 aaagttagagggggtaaagtgcactttaaccta 349  Q
    |||||||||||||| ||||||||||||| ||||    
T  25055442 aaagttagagggggaaaagtgcactttagccta 25055410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 217 - 349
Target Start/End: Original strand, 16650827 - 16650958
Alignment:
Q  217 tcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttta 316  Q
    |||||||||||||||||||||||||||||||||| || ||| |||| ||||| ||||||||||||||| |||||| ||| ||||||||||||| ||||||    
T  16650827 tcaaaattgaccaaaaggaccaaagatgcaaatgggctaaaccttagggggctaaaattgtagtttttatacttagggggtcaaaattgcaag-ttttta 16650925  T
Q  317 aaagttagagggggtaaagtgcactttaaccta 349  Q
    |||||||  || || ||||||||||||| ||||    
T  16650926 aaagttaagggtggaaaagtgcactttagccta 16650958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 175 - 351
Target Start/End: Complemental strand, 25523240 - 25523065
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || ||  |||| |||||| |||||||| |||||||||| |||||||| |||||||||||| | || |||||||| |||| ||||||    
T  25523240 aattaattacacacgtggcaggccacgtaggcgttgaataaatcaaaattgatcaaaaggatcaaagatgcaaaggggctaaatcttagggggtcaaaat 25523141  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaaa 351  Q
    ||||||||||||||||| |||   |||||||||||| |||| |||||||  ||||| ||||||||||||| ||||||    
T  25523140 tgtagtttttgtacttagggggctaaaattgcaagt-ttttgaaagttaaggggggaaaagtgcactttagcctaaa 25523065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 216 - 352
Target Start/End: Complemental strand, 28538806 - 28538671
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||||| ||||||| ||||| |||||| | || |||||||| ||||| |||||||||||||||||||||||||| |||||||||||||| ||||    
T  28538806 gtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttagggggctaaaattgtagtttttgtacttaaggggtcaaaattgcaagt-tttt 28538708  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaaa 352  Q
     |||||||  || || ||||||||||||| |||||||    
T  28538707 gaaagttacgggtggaaaagtgcactttagcctaaaa 28538671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 19754060 - 19754199
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || |||| ||| |||||| ||||||||||||||||||  ||||||||||||||||||||  | || ||||| || |||||||||||    
T  19754060 aattaattacacacgtggccttccacgtaggcgttgaataagtcaaaattgttcaaaaggaccaaagatgcaatggggctaaatcatagggggccaaaat 19754159  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||||| ||| |||  |||||||||||||||||    
T  19754160 tgtagtttttgtatttagggggccaaaattgcaagttttt 19754199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 175 - 344
Target Start/End: Complemental strand, 18485316 - 18485141
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaagggg------- 267  Q
    |||||| |||||| || |||||||| |||||| ||||||||||||||||| |||||||||| |||||||||||| | || |||||||| ||||           
T  18485316 aattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattaaccaaaaggatcaaagatgcaaaggggctaaatcttagggggccaaaac 18485217  T
Q  268 ccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    |||||||||| |||||  |||||| |||  |||||||||||||||||| |||||||||||||  |||||||||||||    
T  18485216 ccaaaattgttgttttgatacttagggggccaaaattgcaagtttttt-aaagttagaggggaaaaagtgcacttta 18485141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 175 - 291
Target Start/End: Original strand, 25524028 - 25524144
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || | |||||| |||||| ||||||||||||||||||||||||||||| ||||||||||| | || |||||||| |||| ||||||    
T  25524028 aattaattacacacgtggtctgccacgtaggcgttgaataagtcaaaattgaccaaaaggactaaagatgcaaaggggctaaatcttagggggtcaaaat 25524127  T
Q  275 tgtagtttttgtactta 291  Q
    | |||||||||||||||    
T  25524128 tatagtttttgtactta 25524144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 182 - 348
Target Start/End: Complemental strand, 24333076 - 24332912
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    |||||| || || ||||| ||||||||||| |  ||||||||||||||||||||||||||||||||| | |  ||||||||  ||| |||||||||||||    
T  24333076 tacacacgtggcatgccacgtaggcattgactg-gtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtt 24332978  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacct 348  Q
    ||||||| ||||||  ||||||||||||| |||| ||| |||  ||||  |||||||||||||||||    
T  24332977 tttgtacataaggggccaaaattgcaagt-ttttgaaacttaagggggaaaaagtgcactttaacct 24332912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 216 - 342
Target Start/End: Original strand, 36486459 - 36486584
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||||| ||||||| ||||| |||||| |  | |||||||| ||| |||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  36486459 gtcaaaattgacaaaaaggatcaaagttgcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagggggtcaaaattgcaag-ttttt 36486557  T
Q  316 aaaagttagagggggtaaagtgcactt 342  Q
    ||||||||| ||||  |||||||||||    
T  36486558 aaaagttaggggggaaaaagtgcactt 36486584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 216 - 345
Target Start/End: Complemental strand, 42195262 - 42195136
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||||||||||||||||||| | || |||||||| ||| |||||||||||| |||||||| || |||  |||||| |||| |||||     
T  42195262 gtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttaggggaccaaaattgtagattttgtacatagggggccaaaatcgcaacttttt- 42195164  T
Q  316 aaaagttagagggggtaaagtgcactttaa 345  Q
     ||||||| |||||| ||||||||||||||    
T  42195163 -aaagtta-agggggaaaagtgcactttaa 42195136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 348
Target Start/End: Original strand, 28539791 - 28539921
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||| | ||||||| ||||| |||||| |  | |||||||| ||| ||||||||||||||||||||||||  || ||||||||||||| |||||    
T  28539791 gtcaaaattggcaaaaaggatcaaagttgcaaagggactaaatcttaggggaccaaaattgtagtttttgtacttagagggtcaaaattgcaag-ttttt 28539889  T
Q  316 aaaagttagagggggtaaagtgcactttaacct 348  Q
    ||||||||| ||||| ||| |||||||||||||    
T  28539890 aaaagttag-gggggaaaaatgcactttaacct 28539921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 216 - 349
Target Start/End: Original strand, 42196171 - 42196303
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||||||||||||||||||||| || |||||||| ||| | |||| |||||||||||||| ||  ||  |||| |  |||  |||||    
T  42196171 gtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttaggggactaaaaatgtagtttttgtacatagagggccaaattcacaa-cttttt 42196269  T
Q  316 aaaagttagagggggtaaagtgcactttaaccta 349  Q
    ||||||||| ||||| ||||||||||||| ||||    
T  42196270 aaaagttaggggggggaaagtgcactttagccta 42196303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 344
Target Start/End: Complemental strand, 36485430 - 36485303
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||||| |||| || ||||| |||||| | |  |||||||| |||||||||||| ||||||||||||||||| | ||||||||| |||||||||    
T  36485430 gtcaaaattgacaaaaatgatcaaagttgcaaaggggttaaatcttagggggccaaaattatagtttttgtacttaagaggtcaaaattgtaagtttttt 36485331  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
     |||||||| || || ||| |||||||||    
T  36485330 -aaagttaggggtggaaaaatgcacttta 36485303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 182 - 349
Target Start/End: Original strand, 5778773 - 5778939
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    ||||||||| || |||||| |  || |||| || ||||||||||  |||||||||||||| |||||  | || |||||||| |||| | ||||||| |||    
T  5778773 tacacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggtt 5778872  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    || ||||||| |||   ||||||||||| ||||| |||||||||||||| ||||||||||||| ||||    
T  5778873 ttggtacttagggggcaaaaattgcaag-tttttgaaagttagagggggaaaagtgcactttagccta 5778939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 297
Target Start/End: Complemental strand, 16650122 - 16650041
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggat 297  Q
    ||||||||||||||||||||||||||||||||| | |  ||||||||  ||| ||||||||||||||||||||||| |||||    
T  16650122 gtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtttttgtacttaggggat 16650041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 216 - 344
Target Start/End: Original strand, 22940594 - 22940720
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||||||  ||||||| ||| | || |||| ||| |||| |||||||||| |||||||||||| |||  |||||||||||| |||||    
T  22940594 gtcaaaattgaccaaaaggataaaagatgaaaaggggctaaatttta-ggggtcaaaattgtaatttttgtacttagggggccaaaattgcaag-ttttt 22940691  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
     |||||||  ||||| |||||||||||||    
T  22940692 gaaagttaaggggggaaaagtgcacttta 22940720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 228 - 358
Target Start/End: Complemental strand, 5778017 - 5777890
Alignment:
Q  228 caaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagg 327  Q
    |||||||||||||| |||||  | || |||||||| |||| | ||||||| ||||| ||||||| ||| |||||||||||||| |||| ||||||  |||    
T  5778017 caaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaagt-ttttgaaagtt--agg 5777921  T
Q  328 gggtaaagtgcactttaacctaaaatgtatg 358  Q
    ||| ||||||||||||| |||||| ||||||    
T  5777920 ggggaaagtgcactttagcctaaattgtatg 5777890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 214 - 344
Target Start/End: Original strand, 25056349 - 25056479
Alignment:
Q  214 aagtcaaaattgaccaaaaggaccaaagatgcaaatgagcc-aaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttt 312  Q
    |||||||||||| | ||||  |||||||||| ||||||| | |||||||| |||| |||||||||||||||  |||||| ||| ||||||||||||| ||    
T  25056349 aagtcaaaattggctaaaacaaccaaagatgtaaatgaggctaaatcttagggggtcaaaattgtagttttaatacttagggggtcaaaattgcaag-tt 25056447  T
Q  313 tttaaaagttagagggggtaaagtgcacttta 344  Q
    ||| ||||||||  | || |||||||||||||    
T  25056448 tttgaaagttaggagtggaaaagtgcacttta 25056479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 349
Target Start/End: Original strand, 40255682 - 40255775
Alignment:
Q  255 aaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    |||||||| ||||||||||||||||||| |||| ||| ||| |||||||||||||||||| |||| | ||| |||| ||||||||||||| ||||    
T  40255682 aaatcttagggggccaaaattgtagtttctgtatttagggggtcaaaattgcaagtttttaaaaattaaga-ggggaaaagtgcactttagccta 40255775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 18486515 - 18486562
Alignment:
Q  1 ttgacggtggagggaagttcggaatagatgtggttggattcttcttgg 48  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18486515 ttgacggtggagggaagttcggaatcgatgtggttggattcttcttgg 18486562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 182 - 349
Target Start/End: Original strand, 33160225 - 33160389
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    ||||||||| || ||||| |||||||||||    |||||||||| | |||||||  |||| ||||| || || ||||||||||||| |||||||||||||    
T  33160225 tacacatgtggcgtgccacgtaggcattgaccg-gtcaaaattggctaaaaggattaaagttgcaa-tgggctaaatcttaaggggtcaaaattgtagtt 33160322  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    | | |||||| |||   |||||||||||||||| |||| |||  ||||| ||||||||||||| ||||    
T  33160323 tctatacttagggggctaaaattgcaagtttttgaaaa-ttaaggggggaaaagtgcactttagccta 33160389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 314
Target Start/End: Complemental strand, 33158188 - 33158130
Alignment:
Q  256 aatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||||||||| ||||||||||||||||||||||| ||  ||||||||||||||||||    
T  33158188 aatcttaaggggtcaaaattgtagtttttgtacttagggtgtcaaaattgcaagttttt 33158130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 314
Target Start/End: Original strand, 5962546 - 5962641
Alignment:
Q  219 aaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||||  ||||||||||||||||| |||| ||| |||| ||| | ||| |||||| ||||||||||||||| |||| ||||||| ||| |||||    
T  5962546 aaaattggtcaaaaggaccaaagatgtaaattagctaaatattaggtggctaaaattatagtttttgtacttaggggaccaaaattacaaattttt 5962641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 351
Target Start/End: Original strand, 20216711 - 20216868
Alignment:
Q  193 cctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaa 292  Q
    |||||||| ||||| ||||   |||||||||||||  ||||||| |    |||||||| || || ||||  ||||||||||||||||||||||||  ||     
T  20216711 cctgccatataggcgttgaccgagtcaaaattgacgtaaaggactactattgcaaatgggctaattcttggggggccaaaattgtagtttttgtatata- 20216809  T
Q  293 gggatc-aaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaaa 351  Q
    |||| | |||||||||||||||| |||| | || ||||| ||||||||||||||||||||    
T  20216810 gggagctaaaattgcaagtttttgaaaattaag-gggggaaaagtgcactttaacctaaa 20216868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 216 - 314
Target Start/End: Complemental strand, 2186900 - 2186802
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||||||||||||||||||||| |||   || |||||||| |||   ||||||||||||||||||| ||   || ||||||||||| |||||    
T  2186900 gtcaaaattgaccaaaaggaccaaagatgtaaaatggctaaatcttaggggattaaaattgtagtttttgtacatagaagaccaaaattgcaacttttt 2186802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 224 - 344
Target Start/End: Complemental strand, 21835162 - 21835044
Alignment:
Q  224 tgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagtta 323  Q
    |||| ||||||| ||||| |||||| | |  |||||||| |||| |||||||||||||||||||| || ||| |||||||  |||  ||||| ||| |||    
T  21835162 tgactaaaaggatcaaagttgcaaaggggttaaatcttagggggtcaaaattgtagtttttgtacatagggggtcaaaatcacaa-ctttttcaaactta 21835064  T
Q  324 gagggggtaaagtgcacttta 344  Q
    ||||||| |||||||||||||    
T  21835063 gaggggg-aaagtgcacttta 21835044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 344
Target Start/End: Complemental strand, 20214359 - 20214199
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    |||||| || ||||||||| ||||| ||||   |||||||||||||  ||||||| |    |||||||| |  || |||| |||||||||||||||||||    
T  20214359 tacacacgtggcctgccatataggcgttgaccgagtcaaaattgacataaaggactactattgcaaatgggataattcttgaggggccaaaattgtagtt 20214260  T
Q  282 tttgtactta-agggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    ||||||| || || | | ||||||||||| ||||| ||||||| |||||| |||||||||||||    
T  20214259 tttgtacatagagtgct-aaaattgcaag-tttttgaaagtta-agggggaaaagtgcacttta 20214199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 266 - 349
Target Start/End: Original strand, 25524148 - 25524231
Alignment:
Q  266 ggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    |||||||||||||||||||||||||| |||  ||||||| ||| ||||| |||| |  | ||||| ||||||||||||| ||||    
T  25524148 ggccaaaattgtagtttttgtacttagggggccaaaattacaaatttttaaaaattaggggggggaaaagtgcactttagccta 25524231  T

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Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 314
Target Start/End: Original strand, 1797268 - 1797366
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||||||||  ||| | | ||||| |||||| | || |||||||||||| |||||||||||||||||||   |||||   |||||||||||||||||    
T  1797268 gtcaaaattgaaaaaaggaatcaaagttgcaaaggggctaaatcttaagggaccaaaattgtagtttttgtttataaggagccaaaattgcaagttttt 1797366  T

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Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 314
Target Start/End: Original strand, 5730833 - 5730931
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||| |||||| ||||||| |||||  | |  |||||||| |||| | ||||||| ||||| ||||||| |||  |||||||| ||||||||    
T  5730833 gtcaaaattgatcaaaagaaccaaagttgcaatggggttaaatcttagggggactaaattgtggttttggtacttagggggccaaaattggaagttttt 5730931  T

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Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 319
Target Start/End: Complemental strand, 2685820 - 2685771
Alignment:
Q  270 aaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaa 319  Q
    |||||||||||||||||||||| |||| |||||||  |||||||| ||||    
T  2685820 aaaattgtagtttttgtacttaggggaccaaaattataagtttttgaaaa 2685771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 2685912 - 2685867
Alignment:
Q  219 aaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaag 264  Q
    |||||||| ||||||||||||||||||||||| || ||||| ||||    
T  2685912 aaaattgatcaaaaggaccaaagatgcaaatgggctaaatcataag 2685867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 314
Target Start/End: Complemental strand, 18154570 - 18154526
Alignment:
Q  269 caaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||||||||||||||||||| |||| ||||||||| ||||||||    
T  18154570 caaaattgtagtttttgtactt-aggggtcaaaattgtaagttttt 18154526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 351
Target Start/End: Complemental strand, 7311681 - 7311586
Alignment:
Q  255 aaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaaa 351  Q
    |||||||| ||||| |||||||||||||||||||||  | |  ||| |||||||| ||||| |||||||| |||||    |||||||||| ||||||    
T  7311681 aaatcttagggggctaaaattgtagtttttgtacttgggaggccaatattgcaag-tttttgaaagttaggggggggggggtgcactttagcctaaa 7311586  T

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Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 323
Target Start/End: Complemental strand, 38834177 - 38834111
Alignment:
Q  255 aaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagtta 323  Q
    |||||||| || || ||||||||||||||||||| |||||| ||||||| ||||  |||||||||||||    
T  38834177 aaatcttagggagctaaaattgtagtttttgtacataaggg-tcaaaatcgcaa-ctttttaaaagtta 38834111  T

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Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 175 - 352
Target Start/End: Original strand, 18905918 - 18906093
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || | |||||| |||||| ||||||||||||||||||| ||||| |||||||||||||||||||| ||||||| |||||| |||||    
T  18905918 aattaattacacacgtggtctgccacgtaggcgttgaataagtcaaaattgatcaaaaagaccaaagatgcaaatgagctaaatctt-aggggctaaaat 18906016  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaaaa 352  Q
    ||||||||||||||||| |||   ||||||||||| ||||| ||||||||| |||| ||||||||||||| |||||||    
T  18906017 tgtagtttttgtacttagggggctaaaattgcaag-tttttgaaagttagaaggggaaaagtgcactttagcctaaaa 18906093  T

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Target: chr2; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 175 - 344
Target Start/End: Complemental strand, 13030460 - 13030295
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||| |||| |||||||| ||||| |||||    
T  13030460 aattaattacacatgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaatgaccaaagatgcaaaagagctaaatcttagggggcaaaaat 13030361  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    |||| ||||||||||| ||||  ||||||| |||| ||||| ||||||  |||||| |||||||||||||    
T  13030360 tgtaatttttgtactt-aggggccaaaattacaag-tttttgaaagtt--agggggaaaagtgcacttta 13030295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 175 - 344
Target Start/End: Complemental strand, 22848362 - 22848194
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || || ||||| |||||| ||||||||||||||||||| |||||||||||||| |||||| | || |||||||| || ||||||||    
T  22848362 aattaattacacacgtggcttgccacgtaggcgttgaataagtcaaaattgatcaaaaggaccaaagctgcaaaggggctaaatcttagggagccaaaat 22848263  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    ||||||||||||| ||| |||| ||||||||||||| |||| |||||||| ||||  |||||||||||||    
T  22848262 tgtagtttttgtatttaggggaccaaaattgcaagt-ttttgaaagttaggggggtaaaagtgcacttta 22848194  T

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Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 215 - 353
Target Start/End: Original strand, 36450891 - 36451027
Alignment:
Q  215 agtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||| ||||||||| ||||  |||||| |||| || ||||  |||||| |||||||||||| |||||||| |||| |||||||||||| ||||    
T  36450891 agtcaaaattggccaaaaggatcaaaattgcaaaggagctaattcttggggggccgaaattgtagtttctgtacttaggggaccaaaattgcaag-tttt 36450989  T
Q  315 taaaagttagagggggtaaagtgcactttaacctaaaat 353  Q
    | ||||||| |||||| ||||||||||||||||||||||    
T  36450990 tgaaagtta-agggggaaaagtgcactttaacctaaaat 36451027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 214 - 349
Target Start/End: Complemental strand, 18797379 - 18797244
Alignment:
Q  214 aagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttt 313  Q
    |||||||||||| | |||||||||||||||||||| | || |||| ||| |||| |||||||||||||||  |||||||||| |||||||||||||| ||    
T  18797379 aagtcaaaattggctaaaaggaccaaagatgcaaaggggctaaattttagggggtcaaaattgtagttttaatacttaaggggtcaaaattgcaagt-tt 18797281  T
Q  314 ttaaaagttagaggg-ggtaaagtgcactttaaccta 349  Q
    || |||||||| ||| || ||||||||||||| ||||    
T  18797280 ttgaaagttagggggtggaaaagtgcactttagccta 18797244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 208 - 350
Target Start/End: Complemental strand, 18904505 - 18904364
Alignment:
Q  208 ttgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgca 307  Q
    |||| ||||| ||||||| |||||||||||||||||| ||| | || || ||||| ||  ||||||||||||||||||||||||||||  ||||||||||    
T  18904505 ttgactaagttaaaattggccaaaaggaccaaagatgtaaaggggctaattcttagggaaccaaaattgtagtttttgtacttaaggggccaaaattgca 18904406  T
Q  308 agttttttaaaagttagagggggtaaagtgcactttaacctaa 350  Q
     | ||||| |||||||  ||||| ||||||||||||| |||||    
T  18904405 cg-tttttgaaagttaaggggggaaaagtgcactttagcctaa 18904364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 22587929 - 22588022
Alignment:
Q  220 aaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||| |||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||| | ||||  |||||||||||||||||    
T  22587929 aaattggccaaaaggaccaaagatgcaaaggggctaaatcttaaggggccaaaattgtagtttttgtacat-aggggccaaaattgcaagttttt 22588022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 216 - 314
Target Start/End: Complemental strand, 24475354 - 24475256
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||||||||||||||||||||||||||||||||||| ||||  || ||||||||||||||||||||| |||||| |||   |||||| |||||||||    
T  24475354 gtcaaaattgaccaaaaggaccaaagatgcaaatgagctaaattatagggggccaaaattgtagtttttatacttagggggcaaaaattacaagttttt 24475256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 28618092 - 28617954
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || | |||||| ||||||||||||| ||||||||| ||||||||  |||||||||||||| | || ||||||| ||||| ||||||    
T  28618092 aattaattacacacgtggtctgccacgtaggcattgaattagtcaaaatagaccaaaataaccaaagatgcaaaggggctaaatctt-agggggcaaaat 28617994  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    || |||||||||||||  |||  |||||||||||| ||||    
T  28617993 tgaagtttttgtacttggggggccaaaattgcaagatttt 28617954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 182 - 276
Target Start/End: Complemental strand, 21837203 - 21837109
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattg 276  Q
    ||||||||| | ||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||| | || |||| || ||||||||||||||    
T  21837203 tacacatgtggtctgccatgtaggcgttgaataagtcaaaattgatcaaaatgaccaaagatgcaaaggggctaaatttttaggggccaaaattg 21837109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 195 - 344
Target Start/End: Original strand, 11258761 - 11258909
Alignment:
Q  195 tgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagg 294  Q
    ||||||| | || |||| || |||||||||||||||||||| ||||  |||||  | || |||||||| ||| | |||||||||||||||||||||| ||    
T  11258761 tgccatgcaagcgttgactaggtcaaaattgaccaaaaggatcaaatctgcaatggggctaaatcttaggggactaaaattgtagtttttgtacttaggg 11258860  T
Q  295 gatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    |  |||||||||||| ||||| |||||||||| ||| ||| |||||||||    
T  11258861 ggccaaaattgcaag-tttttgaaagttagagaggggaaaatgcacttta 11258909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 216 - 353
Target Start/End: Complemental strand, 18299503 - 18299367
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||||||||||||| |||||||||||| | || ||||| || ||||||||||||||||||||| |||||| | |  |||||||| ||| |||||    
T  18299503 gtcaaaattgaccaaaaggatcaaagatgcaaaagggctaaatcatagggggccaaaattgtagtttttatacttaggtggccaaaattgaaag-ttttt 18299405  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaaat 353  Q
     |||||||  || || ||||||||||||| || |||||    
T  18299404 gaaagttacgggtggaaaagtgcactttagccaaaaat 18299367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 175 - 291
Target Start/End: Original strand, 18869092 - 18869209
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgc-aaatgagccaaatcttaaggggccaaaa 273  Q
    |||||| |||||| || ||||||||  ||||| ||||||||||||||||||| ||||| |||||||||||| ||||| || |||||||| |||   ||||    
T  18869092 aattaattacacacgtggcctgccacataggcgttgaataagtcaaaattgatcaaaaagaccaaagatgcaaaatgggctaaatcttaggggataaaaa 18869191  T
Q  274 ttgtagtttttgtactta 291  Q
    ||||||||||||||||||    
T  18869192 ttgtagtttttgtactta 18869209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 182 - 287
Target Start/End: Complemental strand, 22587663 - 22587559
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    |||||| || || ||||||||||||||||| |  |||||||||| ||||||||||||||||||||||   || |||||||| ||||||||||||||||||    
T  22587663 tacacacgtggcatgccatgtaggcattgactg-gtcaaaattggccaaaaggaccaaagatgcaaagaggctaaatcttagggggccaaaattgtagtt 22587565  T
Q  282 tttgta 287  Q
    ||||||    
T  22587564 tttgta 22587559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 352
Target Start/End: Original strand, 7899853 - 7899988
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||| ||  |||| | |||  | || |||||||| ||||| ||||||||||||| |||||||| |||| |||||||||||| |||||    
T  7899853 gtcaaaattgaccaaaaagattaaagttacaatggggctaaatcttagggggctaaaattgtagtttctgtacttaggggaccaaaattgcaag-ttttt 7899951  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaaa 352  Q
     |||||||  ||||| ||||||||||||| |||||||    
T  7899952 gaaagttaaggggggaaaagtgcactttagcctaaaa 7899988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 217 - 312
Target Start/End: Original strand, 18300697 - 18300791
Alignment:
Q  217 tcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttt 312  Q
    ||||||||| |||||||||||||||||||||| | || ||||  || |||| ||||||||||||||||||||||| ||| ||||||||||||||||    
T  18300697 tcaaaattgtccaaaaggaccaaagatgcaaaggggctaaattata-ggggtcaaaattgtagtttttgtacttagggggtcaaaattgcaagttt 18300791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 221 - 350
Target Start/End: Original strand, 23869511 - 23869638
Alignment:
Q  221 aattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaag 320  Q
    |||||| |||||||| |||||||||||| | || |||||||| || || |||||||||||||||||| ||| |||  |||||||||||||||||  ||||    
T  23869511 aattgaacaaaaggatcaaagatgcaaaggggctaaatcttagggagctaaaattgtagtttttgtatttagggggccaaaattgcaagttttt--aaag 23869608  T
Q  321 ttagagggggtaaagtgcactttaacctaa 350  Q
    |||  || || ||||||||||||| |||||    
T  23869609 ttaagggtggaaaagtgcactttagcctaa 23869638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 216 - 344
Target Start/End: Complemental strand, 41878224 - 41878095
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagt--ttt 313  Q
    ||||||||||||||||| ||  |||  |||||  | || |||||||||||||||||||||||||||| |||||||| |||  ||||||||||| |  |||    
T  41878224 gtcaaaattgaccaaaaagattaaaattgcaatggggctaaatcttaaggggccaaaattgtagtttctgtacttagggggccaaaattgcaaatagttt 41878125  T
Q  314 ttaaaagttagagggggtaaagtgcacttta 344  Q
    || ||||||| |||||| |||||||||||||    
T  41878124 ttgaaagtta-aggggggaaagtgcacttta 41878095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 348
Target Start/End: Original strand, 8535606 - 8535756
Alignment:
Q  195 tgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagg 294  Q
    |||||| ||||||||||  ||||||||||||||| ||||||| |    |||||| | || || ||||| |||| |||||||||||||| | ||||||| |    
T  8535606 tgccatataggcattgaccaagtcaaaattgacctaaaggactactattgcaaaggggctaattcttagggggtcaaaattgtagtttctctacttaaag 8535705  T
Q  295 gatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacct 348  Q
    |||||||||| |||| ||||||||||||  ||| || |||||| ||||||||||    
T  8535706 gatcaaaattacaag-tttttaaaagtt--aggaggaaaagtgtactttaacct 8535756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 344
Target Start/End: Complemental strand, 11257785 - 11257625
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    |||||| || || ||||| | |||| |||| || ||||||||||| |||||||| ||||  |||||  | || |||||||| | ||||||||||||||||    
T  11257785 tacacacgtggcatgccacgcaggcgttgactatgtcaaaattgatcaaaaggatcaaatttgcaatggggctaaatcttaggaggccaaaattgtagtt 11257686  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    ||| ||||| |||| | ||||||||||| ||||| ||||||||||| |  |||||||||||||    
T  11257685 tttatactt-agggtttaaaattgcaag-tttttgaaagttagaggagtaaaagtgcacttta 11257625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 314
Target Start/End: Original strand, 26545492 - 26545590
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||| ||||| ||||||||||||||| | || ||||||||  ||| ||||||| || |||||||| ||||||| |||||||||||| |||||    
T  26545492 gtcaaaattgatcaaaatgaccaaagatgcaaaggggctaaatcttagagggtcaaaattataatttttgtatttaaggggtcaaaattgcaaattttt 26545590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 349
Target Start/End: Original strand, 38840464 - 38840596
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||| ||||||||  |||  |||||  | || |||||||| ||||| |||||||||||||||||||||| |||   ||||||||||| |||||    
T  38840464 gtcaaaattgatcaaaaggattaaaattgcaatggggctaaatcttagggggctaaaattgtagtttttgtacttagggggctaaaattgcaag-ttttt 38840562  T
Q  316 aaaagttagagggggtaaagtgcactttaaccta 349  Q
     |||||||  ||||| ||||||||||||| ||||    
T  38840563 gaaagttaaggggggaaaagtgcactttagccta 38840596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 353
Target Start/End: Original strand, 11938759 - 11938895
Alignment:
Q  215 agtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||| | |||| || ||||  |||||| |||| || ||||| |||| ||||||| || |||||||||||| | || |||||||||||| ||||    
T  11938759 agtcaaaattggcaaaaatgatcaaaattgcaaaagagctaattcttaggggggcaaaattata-tttttgtacttaggagaccaaaattgcaag-tttt 11938856  T
Q  315 taaaagttagagggggtaaagtgcactttaacctaaaat 353  Q
    | |||||||| || || ||||||||||||| ||||||||    
T  11938857 tgaaagttaggggtggaaaagtgcactttagcctaaaat 11938895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 322
Target Start/End: Complemental strand, 11996837 - 11996731
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||||||||||||||| ||| | |  ||||||||  |  | ||||||||||||||||||| || ||| ||||||| |||| ||||||    
T  11996837 gtcaaaattgaccaaaaggaccaaagatgtaaaggggttaaatcttagagaactaaaattgtagtttttgtacatagggggtcaaaatcgcaactttttt 11996738  T
Q  316 aaaagtt 322  Q
     ||||||    
T  11996737 gaaagtt 11996731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 314
Target Start/End: Original strand, 802563 - 802660
Alignment:
Q  217 tcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||||||||| ||||||||||| ||||||| | |  ||||||||  ||| ||||||||||||||||||||  | |||  |||||||||||||||||    
T  802563 tcaaaattgacctaaaggaccaaatatgcaaaggggtaaaatcttagagggtcaaaattgtagtttttgtacacagggggccaaaattgcaagttttt 802660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 349
Target Start/End: Complemental strand, 36449860 - 36449776
Alignment:
Q  264 ggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    |||| ||||||||||||||||||||||| |||  ||||||||||||| |||| |||||||  ||||| ||||||||||||| ||||    
T  36449860 gggggcaaaattgtagtttttgtacttagggggccaaaattgcaagt-ttttgaaagttaaggggggaaaagtgcactttagccta 36449776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 350
Target Start/End: Complemental strand, 8534745 - 8534580
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    |||||| |||||||||||| ||||| ||||  ||||||||||||||| ||||||| |    ||||||   || || ||||  ||| ||||||||||||||    
T  8534745 tacacacgtagcctgccatataggcgttgaccaagtcaaaattgacctaaaggactactattgcaaagaggctaattcttg-gggaccaaaattgtagtt 8534647  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaa 350  Q
    | | ||||||| |||||||||||| |||||||| |||| ||| |||||| |||| ||||||||| ||||    
T  8534646 tctatacttaaaggatcaaaattgtaagtttttgaaaa-tta-agggggaaaagagcactttaatctaa 8534580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 216 - 344
Target Start/End: Complemental strand, 26544278 - 26544152
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||| ||||||||||||| ||||||| | || |||||||| | ||| |||| |||||||||||||||| ||| | |||||||| ||  |||||    
T  26544278 gtcaaaattgatcaaaaggaccaaatatgcaaaggtgctaaatcttaggaggctaaaactgtagtttttgtactt-aggaaccaaaattgtaa-attttt 26544181  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
    |||| |||| ||  | |||||||||||||    
T  26544180 aaaaattaggggtagaaaagtgcacttta 26544152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 216 - 287
Target Start/End: Complemental strand, 32739781 - 32739710
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaa-tgagccaaatcttaaggggccaaaattgtagtttttgta 287  Q
    |||||||||| ||||| |||||||||||| ||| ||| | |||||||||||||||||||||||||||||||||    
T  32739781 gtcaaaattggccaaatggaccaaagatggaaaatga-ctaaatcttaaggggccaaaattgtagtttttgta 32739710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 216 - 352
Target Start/End: Complemental strand, 38839372 - 38839237
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||| ||  |||  |||||  | || |||||||| |||||||||||||||||||||||| ||| |||   ||||||||||||||||     
T  38839372 gtcaaaattgaccaaaatgattaaaattgcaatggggctaaatcttagggggccaaaattgtagtttttgtagttagggggctaaaattgcaagtttttg 38839273  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaaa 352  Q
    |||| |||  ||||  ||| ||||||||| |||||||    
T  38839272 aaaa-ttaagggggaaaaaatgcactttagcctaaaa 38839237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 314
Target Start/End: Complemental strand, 32739705 - 32739655
Alignment:
Q  264 ggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||||||||||||||||| ||||||  |||||||||||||||||    
T  32739705 ggggccaaaattgtagtttttgtacataaggggccaaaattgcaagttttt 32739655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 314
Target Start/End: Original strand, 810753 - 810850
Alignment:
Q  217 tcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||||||| | ||||||||||| ||||||| | |  ||||||||  ||| ||||||||||||||||||||  | |||  |||||||||||||||||    
T  810753 tcaaaattgatctaaaggaccaaatatgcaaaggggtaaaatcttagagggtcaaaattgtagtttttgtacacagggggccaaaattgcaagttttt 810850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 349
Target Start/End: Complemental strand, 7898821 - 7898689
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||| ||||||||  |||  |||||  | || |||||||| ||||||||||||||||||| | |||||| | |   ||||||||||| |||||    
T  7898821 gtcaaaattgatcaaaaggattaaaattgcaatggggctaaatcttagggggccaaaattgtagtttctatacttaggaggcaaaaattgcaag-ttttt 7898723  T
Q  316 aaaagttagagggggtaaagtgcactttaaccta 349  Q
     |||||||  ||| | ||||||||||||||||||    
T  7898722 gaaagttaaggggagaaaagtgcactttaaccta 7898689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 314
Target Start/End: Original strand, 24476861 - 24476913
Alignment:
Q  262 aaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||| ||||||||||||||||||||||| |||| ||||||| |||||||||    
T  24476861 aaggggtcaaaattgtagtttttgtacttaggggaccaaaattacaagttttt 24476913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 348
Target Start/End: Complemental strand, 13568049 - 13567971
Alignment:
Q  269 caaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacct 348  Q
    ||||||||||||||||||| ||| |||  ||||||||||||| |||| ||| ||||| |||| ||||| |||||||||||    
T  13568049 caaaattgtagtttttgtatttagggggccaaaattgcaagt-ttttgaaacttagaaggggaaaagtacactttaacct 13567971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 13570580 - 13570626
Alignment:
Q  268 ccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||||| ||||||||||||||||||||  ||||||||||||||||    
T  13570580 ccaaaattatagtttttgtacttaagggactaaaattgcaagttttt 13570626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 201 - 286
Target Start/End: Complemental strand, 1410145 - 1410060
Alignment:
Q  201 gtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgt 286  Q
    |||||| |||||||||||||| ||||| |||||||  |||| |||||||  || |||||||| ||| ||||||||||  |||||||    
T  1410145 gtaggcgttgaataagtcaaagttgacaaaaaggattaaagttgcaaataggctaaatcttaggggaccaaaattgtcatttttgt 1410060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 350
Target Start/End: Complemental strand, 18869039 - 18868921
Alignment:
Q  229 aaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagaggg 328  Q
    |||| ||||||||||| |||||||| || ||||| |||  ||||||||||||||||||| ||| | |  ||||||||||||| |||| |||||||| ||     
T  18869039 aaaaagaccaaagatgtaaatgagctaa-tctta-gggatcaaaattgtagtttttgtatttaggaggccaaaattgcaagt-ttttgaaagttaggggt 18868943  T
Q  329 ggtaaagtgcactttaacctaa 350  Q
    || ||||| ||||||| |||||    
T  18868942 ggaaaagtacactttagcctaa 18868921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 344
Target Start/End: Original strand, 1034453 - 1034567
Alignment:
Q  228 caaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagg 327  Q
    |||||||||||||| ||||| || || |||||||| |||| | ||||||| ||||| |||| || |||  |||||||||| |||||| ||| ||||  ||    
T  1034453 caaaaggaccaaagttgcaattg-gctaaatcttaggggggctaaattgtggttttggtacgtagggggccaaaattgcatgtttttgaaa-gttaaggg 1034550  T
Q  328 gggtaaagtgcacttta 344  Q
    ||| |||||||||||||    
T  1034551 gggaaaagtgcacttta 1034567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 319
Target Start/End: Original strand, 41879237 - 41879286
Alignment:
Q  270 aaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaa 319  Q
    ||||||||||||| |||||||| |||  ||||||||||||||||| ||||    
T  41879237 aaaattgtagtttatgtacttagggggccaaaattgcaagtttttgaaaa 41879286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 8e-40; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 175 - 353
Target Start/End: Complemental strand, 12700344 - 12700169
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    || ||||| || |||| ||||||    
T  12700344 aattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccaaagatgcaatgtggctaaatcatagggggtcaaaat 12700245  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaaaat 353  Q
    ||||||||||||||||| |||  |||||||||||| ||||| ||||||  |||||| ||||||||||||| ||||||||    
T  12700244 tgtagtttttgtacttagggggccaaaattgcaag-tttttgaaagtt--aggggggaaagtgcactttagcctaaaat 12700169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 175 - 314
Target Start/End: Original strand, 34019075 - 34019214
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || ||||| || |||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| ||| |||||||    
T  34019075 aattaattacacacgtggcctgtcacgtaggcgttgaataaatcaaaattgaccaaaaggaccaaagatgcaaatgagctaaattttaggggaccaaaat 34019174  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||| ||||||| || ||| ||||||||||||||||||    
T  34019175 tgtagtgtttgtacctagggggtcaaaattgcaagttttt 34019214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 175 - 344
Target Start/End: Complemental strand, 47614356 - 47614188
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || |||||||| |||||| ||||||||||||||||| |||||||| ||||||||||||||   || |||||||| |||||||||||    
T  47614356 aattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattaaccaaaagcaccaaagatgcaaagaggctaaatcttagggggccaaaat 47614257  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    ||| |||||  |||||| |||  ||||||||||||| |||| |||||||||||||  |||||||||||||    
T  47614256 tgttgttttgatacttagggggccaaaattgcaagt-ttttgaaagttagaggggaaaaagtgcacttta 47614188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 182 - 353
Target Start/End: Complemental strand, 8876070 - 8875900
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    ||||||||| |||||||| |||||| |||||||||||||||||||| |||||||||||| ||||||||  || |||||||| ||||||||||||||||||    
T  8876070 tacacatgtggcctgccacgtaggcgttgaataagtcaaaattgactaaaaggaccaaatatgcaaattggctaaatcttagggggccaaaattgtagtt 8875971  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaaaat 353  Q
    ||||||| ||||||   |||||||| || |||||  || |||  ||| | ||||||||||||| ||||||||    
T  8875970 tttgtacataaggggctaaaattgc-agctttttcgaacttaaggggtgaaaagtgcactttagcctaaaat 8875900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 216 - 344
Target Start/End: Original strand, 54540761 - 54540888
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||||| ||||||| ||||| |||||| | || |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  54540761 gtcaaaattgacaaaaaggatcaaagttgcaaaggggctaaatcttagggggccaaaattgtagtttttgtacttaaggggtcaaaattgcaag-ttttt 54540859  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
     |||||||  ||||| |||||||||||||    
T  54540860 gaaagttaaggggggaaaagtgcacttta 54540888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 182 - 349
Target Start/End: Complemental strand, 19985012 - 19984847
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    ||||||||| || ||||| ||||||||||| |  ||||||||||||||||||||||||||||||||| | |  ||||||||| ||| |||||||||||||    
T  19985012 tacacatgtggcatgccacgtaggcattgactg-gtcaaaattgaccaaaaggaccaaagatgcaaaggggttaaatcttaaagggtcaaaattgtagtt 19984914  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    ||||||| || |||  ||||||||||||| |||| ||| |||| ||||| ||||||||||||| ||||    
T  19984913 tttgtacatagggggccaaaattgcaagt-ttttgaaacttagggggggaaaagtgcactttagccta 19984847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 175 - 276
Target Start/End: Original strand, 47615507 - 47615608
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||| |||||||||||    
T  47615507 aattaattacacacgtggcctgccacgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaaggggctaaatcttagggggccaaaat 47615606  T
Q  275 tg 276  Q
    ||    
T  47615607 tg 47615608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 215 - 350
Target Start/End: Complemental strand, 534630 - 534496
Alignment:
Q  215 agtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||| ||||| |||||||||||||||||  || |||||||| ||||||||||||||||||||||||| || | | |||||||||||||| |||    
T  534630 agtcaaaattggccaaatggaccaaagatgcaaataggctaaatcttagggggccaaaattgtagtttttgtacataggaggtcaaaattgcaagt-ttt 534532  T
Q  315 taaaagttagagggggtaaagtgcactttaacctaa 350  Q
    | | |||||||||||  ||||||||||||| |||||    
T  534531 tgagagttagaggggaaaaagtgcactttagcctaa 534496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 216 - 351
Target Start/End: Complemental strand, 7758532 - 7758398
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||||||||||||||||||||| |||| | |  |||||||| ||||| |||||||||||||||||||||| ||| |||||||||||||| ||||    
T  7758532 gtcaaaattgaccaaaaggaccaaagatacaaaggggttaaatcttagggggcaaaaattgtagtttttgtacttagggggtcaaaattgcaagt-tttt 7758434  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaa 351  Q
     |||||||  ||||  ||||||||||||| ||||||    
T  7758433 gaaagttaagggggaaaaagtgcactttagcctaaa 7758398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 216 - 352
Target Start/End: Complemental strand, 7267773 - 7267639
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagcc-aaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||||||||||||  |||| ||||| |||| | |||||||| ||||||||||||||||||| |||||||| |||  ||||||||||||| |||    
T  7267773 gtcaaaattgaccaaaaggattaaagttgcaa-tgaggctaaatcttagggggccaaaattgtagtttctgtacttagggggccaaaattgcaagt-ttt 7267676  T
Q  315 taaaagttagagggggtaaagtgcactttaacctaaaa 352  Q
    | ||||||| |||||| |||||||||||||||||||||    
T  7267675 tgaaagtta-agggggaaaagtgcactttaacctaaaa 7267639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 356
Target Start/End: Original strand, 23770378 - 23770517
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||| |||||||||||||| ||||||||||| | |  |||||||| ||||| ||||||||||||||||||| ||||||| |||||||| || ||||||    
T  23770378 gtcaaagttgaccaaaaggactaaagatgcaaaggggttaaatcttagggggctaaaattgtagtttttgtacataagggaccaaaattgtaactttttt 23770477  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaaatgta 356  Q
    |||| |||  ||| | ||| |||||||||||| ||||||||    
T  23770478 aaaa-ttaaggggagaaaattgcactttaaccaaaaatgta 23770517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 182 - 349
Target Start/End: Original strand, 47610517 - 47610683
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    ||||||||| || |||||| |  || |||| || ||||||||||  |||||||||||||| |||||  | || |||||||| |||| | ||||||| |||    
T  47610517 tacacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggtt 47610616  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    || ||||||| |||  |||||||||||| ||||| |||||||||||||| ||||||||||||||||||    
T  47610617 ttggtacttagggggccaaaattgcaag-tttttgaaagttagagggggaaaagtgcactttaaccta 47610683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 216 - 314
Target Start/End: Complemental strand, 49216377 - 49216279
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||||||| |||||| || ||||||||||||||||| ||||||||||||| || ||||||||||||||||| || ||| |||||||||||| |||||    
T  49216377 gtcaaaattggccaaaatgatcaaagatgcaaatgagctaaatcttaaggggacataattgtagtttttgtacatagggggtcaaaattgcaacttttt 49216279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 175 - 328
Target Start/End: Original strand, 12703430 - 12703582
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || | |||||| |||||| |||||||||||||||||   ||||| ||||||||||||||  | || ||||| || |||||||||||    
T  12703430 aattaattacacacgtggtctgccacgtaggcgttgaataagtcaaaattattcaaaatgaccaaagatgcaatggggctaaatcatagggggccaaaat 12703529  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagaggg 328  Q
    ||||||||||||||||| |||  ||||||| |||  ||||| ||||||||||||    
T  12703530 tgtagtttttgtacttagggggccaaaattacaa-atttttgaaagttagaggg 12703582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 216 - 308
Target Start/End: Complemental strand, 23769986 - 23769895
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaa 308  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||| || ||  |||| ||||||||||    
T  23769986 gtcaaaattgaccaaaaggaccaaagatgcaaatgagcgaaatctt-aggggtcaaaattgtagtttttgcacatagaggattaaaattgcaa 23769895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 255 - 344
Target Start/End: Original strand, 29932709 - 29932796
Alignment:
Q  255 aaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    ||||||||||||| |||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||||||| |||||||||||||    
T  29932709 aaatcttaaggggtcaaaattgtagtttttgtactt-aggggccaaaattgcaag-tttttgaaagttagagggggaaaagtgcacttta 29932796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 255 - 344
Target Start/End: Original strand, 29981863 - 29981950
Alignment:
Q  255 aaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    ||||||||||||| |||||||||||||||||||||| ||||  |||||||||||| ||||| |||||||||||||| |||||||||||||    
T  29981863 aaatcttaaggggtcaaaattgtagtttttgtactt-aggggccaaaattgcaag-tttttgaaagttagagggggaaaagtgcacttta 29981950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 215 - 344
Target Start/End: Complemental strand, 54539886 - 54539758
Alignment:
Q  215 agtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||| | ||||||| ||||| ||||||||||| |||||||| |||  ||||||||||||||||||| ||| ||| | |||||||||||| |||    
T  54539886 agtcaaaattggcaaaaaggatcaaagttgcaaatgagctaaatcttaggggatcaaaattgtagtttttgtatttagggggttaaaattgcaagt-ttt 54539788  T
Q  315 taaaagttagagggggtaaagtgcacttta 344  Q
    | |||||||  || || |||||||||||||    
T  54539787 tgaaagttaagggtggaaaagtgcacttta 54539758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 216 - 344
Target Start/End: Original strand, 46721191 - 46721318
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||||||| |||||||||| ||||||| | || |||||||| ||| | ||||||||||||||||||| || ||| | ||||| ||||  |||||    
T  46721191 gtcaaaattgaccagaaggaccaaatatgcaaaggggctaaatcttaggggactaaaattgtagtttttgtacatagggggttaaaatcgcaa-cttttt 46721289  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
    ||||||||| ||| | |||||||||||||    
T  46721290 aaaagttagggggagaaaagtgcacttta 46721318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 182 - 344
Target Start/End: Complemental strand, 8456641 - 8456481
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagcc-aaatcttaaggggccaaaattgtagt 280  Q
    |||||| || || ||||| | |||| |||| || |||||||||||| ||||||| ||||  ||||| |||| | |||||||| |||||||||||||||||    
T  8456641 tacacacgtggcatgccacgcaggcgttgactaggtcaaaattgactaaaaggatcaaatttgcaa-tgaggctaaatcttagggggccaaaattgtagt 8456543  T
Q  281 ttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    ||||||| ||| |||| ||||||||||||||||| |||| |||| ||||  |||||||||||||    
T  8456542 ttttgtatttaggggaccaaaattgcaagtttttgaaaa-ttag-ggggaaaaagtgcacttta 8456481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 343
Target Start/End: Complemental strand, 24516562 - 24516464
Alignment:
Q  244 gcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttt 343  Q
    ||||| |||| |||||||||||||||||||||||||||||| |||||| ||   |||||||||||||||||| |||||||| ||||  ||||||||||||    
T  24516562 gcaaaggagctaaatcttaaggggccaaaattgtagtttttatacttagggtgccaaaattgcaagtttttt-aaagttaggggggaaaaagtgcacttt 24516464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 350
Target Start/End: Original strand, 51470426 - 51470558
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||| |||||||||||||| |||||  |||| |||||||| |||  | ||||||| ||||| ||||||| |||||| |||||||||| |||||    
T  51470426 gtcaaaattgatcaaaaggaccaaagttgcaatggagctaaatcttaggggtgctaaattgtggttttggtacttaggggatctaaattgcaag-ttttt 51470524  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaa 350  Q
     |||||||| ||||| | ||||||||||| |||||    
T  51470525 gaaagttag-gggggaagagtgcactttagcctaa 51470558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 319
Target Start/End: Complemental strand, 11670548 - 11670411
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    |||||| || |||||||| ||| || ||||||||||||||||||| ||||||||| ||| ||||||  |  | ||||| |||||| |||||||| |||||    
T  11670548 tacacacgtggcctgccacgtaagcgttgaataagtcaaaattgatcaaaaggacaaaaaatgcaatgggactaaatcataagggaccaaaattatagtt 11670449  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaa 319  Q
    ||| |||||| ||||  |||||||||| ||||| ||||    
T  11670448 tttatacttaggggactaaaattgcaaatttttgaaaa 11670411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 353
Target Start/End: Complemental strand, 47609827 - 47609691
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||  |||||||||||||| |||||  | || |||||||| ||||   ||||||| ||||| ||||||| ||| |||||||||||||| ||||    
T  47609827 gtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggtcaaaattgcaagt-tttt 47609729  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaaat 353  Q
     |||||||| ||||| |||||||| |||| ||||||||    
T  47609728 gaaagttagggggggaaaagtgcattttagcctaaaat 47609691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 6249779 - 6249641
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagcc-aaatcttaaggggccaaaa 273  Q
    |||||| |||| |||| | |||||| |||| | |||| || ||||||||||| |||||||| ||||  ||||| |||| | ||||||||||||   ||||    
T  6249779 aattaattacagatgtggtctgccacgtagacgttgactaggtcaaaattgatcaaaaggatcaaatttgcaa-tgagactaaatcttaagggat-aaaa 6249682  T
Q  274 ttgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  6249681 ttgtagtttttgtacttaagggattaaaattgcaagttttt 6249641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 217 - 344
Target Start/End: Complemental strand, 46720070 - 46719944
Alignment:
Q  217 tcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttta 316  Q
    |||||||||||||||||||||||| ||||||||| || ||||||||  || | ||||||||||||||| ||| || |||  |||||| ||||  ||||||    
T  46720070 tcaaaattgaccaaaaggaccaaatatgcaaatgggctaaatcttagaggactaaaattgtagtttttatacatagggggccaaaatcgcaa-cttttta 46719972  T
Q  317 aaagttagagggggtaaagtgcacttta 344  Q
    |||||||  ||||| ||| |||||||||    
T  46719971 aaagttaaggggggaaaaatgcacttta 46719944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 314
Target Start/End: Complemental strand, 4271570 - 4271472
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||||||||| ||||||| ||||| |||||||| || ||||||||||  || ||||||||||||||| || ||||| |||||||||| ||| |||||    
T  4271570 gtcaaaattgacaaaaaggatcaaagttgcaaatgggctaaatcttaagatgctaaaattgtagtttttatatttaagagatcaaaattacaaattttt 4271472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 216 - 314
Target Start/End: Complemental strand, 31645103 - 31645005
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||  ||||||||||||||||||||||| || |||||||| | ||  |||||||||||||||| ||||| |||  |||||||| ||||||||    
T  31645103 gtcaaaattggtcaaaaggaccaaagatgcaaatgggctaaatcttaggaggttaaaattgtagtttttgcacttagggggccaaaattgtaagttttt 31645005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 349
Target Start/End: Complemental strand, 29931356 - 29931224
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||||||| |    |||||| | |  |||||||| |||||||||||||||||||||||| ||| |||   |||||||||||| ||||    
T  29931356 gtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagt-tttt 29931258  T
Q  316 aaaagttagagggggtaaagtgcactttaaccta 349  Q
     |||||||| || || ||||||||||||| ||||    
T  29931257 gaaagttaggggtggaaaagtgcactttagccta 29931224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 349
Target Start/End: Complemental strand, 29980510 - 29980378
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||||||| |    |||||| | |  |||||||| |||||||||||||||||||||||| ||| |||   |||||||||||| ||||    
T  29980510 gtcaaaattgaccaaaaggactattattgcaaaggggttaaatcttagggggccaaaattgtagtttttgtatttagggggcaaaaattgcaagt-tttt 29980412  T
Q  316 aaaagttagagggggtaaagtgcactttaaccta 349  Q
     |||||||| || || ||||||||||||| ||||    
T  29980411 gaaagttaggggtggaaaagtgcactttagccta 29980378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 344
Target Start/End: Original strand, 40426749 - 40426877
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatc-aaaattgcaagttttt 314  Q
    ||||||||| |||||||||||||||||  |||| |||| ||||| || ||||||||||||||| ||||||||  ||||||  | ||| |||||| |||||    
T  40426749 gtcaaaattaaccaaaaggaccaaagacacaaaggagctaaatcatagggggccaaaattgtaatttttgtatataaggggccgaaatttgcaacttttt 40426848  T
Q  315 taaaagttagagggggtaaagtgcacttta 344  Q
    | |||||||  ||||| |||||||||||||    
T  40426849 t-aaagttaaggggggaaaagtgcacttta 40426877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 6250515 - 6250672
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    |||| |||| || ||||||||||||||||| || ||||||||||  |||||||| |||||||||||||| |  ||||||||  |||| |||||| ||| |    
T  6250515 tacatatgtggcgtgccatgtaggcattgatta-gtcaaaattggtcaaaaggatcaaagatgcaaatg-gttaaatcttagagggctaaaattttaggt 6250612  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactt 342  Q
    ||||||| || |||| ||||||  ||| |||||||||| ||| | |||| |||||||||||    
T  6250613 tttgtacataggggaccaaaatcacaa-ttttttaaaacttaaaagggggaaagtgcactt 6250672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 344
Target Start/End: Complemental strand, 51470102 - 51469975
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||| |||||||||||||| |||||  | || |||||||| ||||   ||||||| ||||| ||||||| |||  |||||||||||||||||     
T  51470102 gtcaaaattgatcaaaaggaccaaagttgcaatggggctaaatcttaggggggttaaattgtggttttggtacttagggggccaaaattgcaagtttttg 51470003  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
    |||| |||| | ||| |||||||||||||    
T  51470002 aaaa-ttagggagggaaaagtgcacttta 51469975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 182 - 329
Target Start/End: Original strand, 6171181 - 6171324
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    ||||||||| || ||||| ||||||||||| || |||||||||| ||||||||||||||||||||||||    ||||||||  ||| ||||||| |||||    
T  6171181 tacacatgtggcgtgccaagtaggcattgatta-gtcaaaattggccaaaaggaccaaagatgcaaatg-tttaaatcttagagggtcaaaattatagtt 6171278  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggg 329  Q
    ||||||| | ||||  ||||||  ||| |||||||||| |||||||||    
T  6171279 tttgtacat-aggggccaaaatcacaa-ttttttaaaacttagagggg 6171324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 47615188 - 47615235
Alignment:
Q  1 ttgacggtggagggaagttcggaatagatgtggttggattcttcttgg 48  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  47615188 ttgacggtggagggaagttcggaatcgatgtggttggattcttcttgg 47615235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 182 - 349
Target Start/End: Complemental strand, 51347432 - 51347266
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    |||||| ||||||||||| ||| || |||| || ||||| ||||| ||||| || ||||| |||||| | |  |||||||| |||| |||||||||  ||    
T  51347432 tacacacgtagcctgccacgtatgcgttgactaggtcaacattgatcaaaatgatcaaagttgcaaacgggttaaatcttagggggtcaaaattgtcatt 51347333  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    ||||| | ||  ||| ||||||||||| ||||| |||  | |||||||| ||||||||||||||||||    
T  51347332 tttgttcatagaggaccaaaattgcaactttttcaaacttaagaggggg-aaagtgcactttaaccta 51347266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 349
Target Start/End: Original strand, 19986008 - 19986175
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    |||||| || || ||||| ||||||||||| |  ||||||||||||| ||| ||||||||||||||| | |  ||||||||  ||| |||||||||||||    
T  19986008 tacacacgtggcatgccacgtaggcattgactg-gtcaaaattgaccgaaatgaccaaagatgcaaaggggttaaatcttagagggtcaaaattgtagtt 19986106  T
Q  282 tttgtactta--agggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    ||| ||| ||  ||||  ||||||||||||||||| |||  | ||| |||| ||||||||||||| ||||    
T  19986107 tttatacataggaggggccaaaattgcaagtttttgaaacttaaga-ggggaaaagtgcactttagccta 19986175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 349
Target Start/End: Original strand, 22776783 - 22776915
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||   ||| |||||||| ||||||| | || || ||||| ||||||||||||||||||||||||| || |||  |||||||||||  ||| |    
T  22776783 gtcaaaattgggaaaatggaccaaatatgcaaaggggctaattcttagggggccaaaattgtagtttttgtacatagggggccaaaattgcaa-ctttct 22776881  T
Q  316 aaaagttagagggggtaaagtgcactttaaccta 349  Q
     |||||||| || || ||||||||||||| ||||    
T  22776882 gaaagttaggggtggaaaagtgcactttagccta 22776915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 6170348 - 6170304
Alignment:
Q  270 aaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  6170348 aaaattgtaatttttgtacttaagggatcaaaattgcaagttttt 6170304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 346
Target Start/End: Original strand, 34940125 - 34940286
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    ||||||||| || ||| | ||||||||||| | ||||||||||||  |||| ||||||| || |||||| || || | |||  || ||||||||||| ||    
T  34940125 tacacatgtggcatgctacgtaggcattga-tcagtcaaaattgagaaaaaagaccaaatatacaaatgggctaattattagaggaccaaaattgtaatt 34940223  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaac 346  Q
    ||| ||| |||| ||| ||||||||||| ||||||||| ||||| |||  |||||||||||||||    
T  34940224 tttatacataagagattaaaattgcaag-tttttaaaaattaga-gggaaaaagtgcactttaac 34940286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 349
Target Start/End: Original strand, 51038803 - 51038893
Alignment:
Q  258 tcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    ||||||||| ||||||||||||||||||| | || ||| ||||||||||||  |||||||||||||  || || ||||||||||||| ||||    
T  51038803 tcttaagggaccaaaattgtagtttttgttcatagggggtcaaaattgcaa-ctttttaaaagttaagggtggaaaagtgcactttagccta 51038893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 348
Target Start/End: Complemental strand, 52104604 - 52104480
Alignment:
Q  219 aaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaa 318  Q
    |||||||  ||||| |||||||||||||||||||  |||||||| | |||||||||| |||||||||||| ||  ||| ||||||| |||  ||||| ||    
T  52104604 aaaattggtcaaaatgaccaaagatgcaaatgagttaaatcttaggtggccaaaattatagtttttgtacata--ggaccaaaattacaa-ctttttgaa 52104508  T
Q  319 agttagagggggtaaagtgcactttaacct 348  Q
    ||||  |||||| |||||||| ||||||||    
T  52104507 agtt--agggggaaaagtgcattttaacct 52104480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 353
Target Start/End: Original strand, 54986978 - 54987112
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||| |||||| || |||||||||||| |||| ||||||||  ||| ||||||| |||||||| ||| || ||||  ||||| |||| |||||     
T  54986978 gtcaaaattggccaaaatgatcaaagatgcaaaggagctaaatcttagagggtcaaaattatagtttttatacataggggactaaaatcgcaactttttg 54987077  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaaat 353  Q
    |||  |   |||||| ||||||||||||||||| ||||    
T  54987078 aaactt---agggggaaaagtgcactttaaccttaaat 54987112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 255 - 349
Target Start/End: Original strand, 7268837 - 7268929
Alignment:
Q  255 aaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    |||||||| | ||||||||||||||||| | |||||| | |  |||||||||||| ||||| |||||||| ||||| ||||||||||||||||||    
T  7268837 aaatcttaggaggccaaaattgtagtttctatacttaggaggccaaaattgcaag-tttttgaaagttag-gggggaaaagtgcactttaaccta 7268929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 53901407 - 53901461
Alignment:
Q  264 ggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaa 318  Q
    |||||||| ||||||||||||||||||||||  |||||||||||| |||||||||    
T  53901407 ggggccaacattgtagtttttgtacttaaggagtcaaaattgcaacttttttaaa 53901461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 286
Target Start/End: Complemental strand, 49398243 - 49398186
Alignment:
Q  229 aaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgt 286  Q
    ||||||| ||||| ||||||||||| |||||||||| ||||||||||||| |||||||    
T  49398243 aaaaggatcaaagttgcaaatgagctaaatcttaagaggccaaaattgtaatttttgt 49398186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 314
Target Start/End: Original strand, 55191967 - 55192064
Alignment:
Q  217 tcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    ||||||||||| |||| || ||||  |||||| | |  || |||| |||||||||||||||||||||||||||||  ||  |||||||||||||||||    
T  55191967 tcaaaattgacaaaaatgatcaaaattgcaaaggggttaattcttgaggggccaaaattgtagtttttgtacttagagggccaaaattgcaagttttt 55192064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 314
Target Start/End: Original strand, 11671299 - 11671410
Alignment:
Q  203 aggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaa 302  Q
    |||| |||||||| |||||||||| ||||||||||||||||| ||| | |  ||||| || |||| ||||  |||||||||| || ||| |||   ||||    
T  11671299 aggcgttgaataaatcaaaattgatcaaaaggaccaaagatgtaaaggggttaaatcatagggggtcaaatctgtagtttttatatttagggggctaaaa 11671398  T
Q  303 ttgcaagttttt 314  Q
    ||||||||||||    
T  11671399 ttgcaagttttt 11671410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 255 - 344
Target Start/End: Original strand, 535792 - 535880
Alignment:
Q  255 aaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    |||||||| ||||  |||||| |||||||  ||||||||||| |||||||||||| ||||| |||||||| || || ||||| |||||||    
T  535792 aaatcttagggggtgaaaattatagttttaatacttaagggaccaaaattgcaag-tttttgaaagttaggggtggaaaagtacacttta 535880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 353
Target Start/End: Original strand, 53616042 - 53616123
Alignment:
Q  271 aaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaaaat 353  Q
    |||||||||||||||||| ||||| || |||||| |||| | |||||||||||  || || ||||||||||||| | ||||||    
T  53616042 aaattgtagtttttgtacataaggaattaaaattacaag-tgtttaaaagttaagggaggaaaagtgcactttatcttaaaat 53616123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 275
Target Start/End: Complemental strand, 53897231 - 53897173
Alignment:
Q  217 tcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaatt 275  Q
    ||||||||||||||||||| ||||| |||||||| || ||  |||| ||||||||||||    
T  53897231 tcaaaattgaccaaaaggatcaaagttgcaaatgggctaatacttagggggccaaaatt 53897173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 49220532 - 49220575
Alignment:
Q  234 gaccaaagatgcaaatgagccaaatcttaaggggccaaaattgta 278  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||    
T  49220532 gaccaaagatgcaaatgggctaaatcttaa-gggccaaaattgta 49220575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 1e-38; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 175 - 344
Target Start/End: Complemental strand, 7315050 - 7314883
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || |||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||| | || |||||||| |||| ||||||    
T  7315050 aattaattacacacgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggtcaaaat 7314951  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    ||| |||||  ||||| ||||  |||||||||||| ||||| |||||||||||||| |||||||||||||    
T  7314950 tgttgttttgatactt-aggggccaaaattgcaag-tttttgaaagttagagggggaaaagtgcacttta 7314883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 216 - 352
Target Start/End: Original strand, 1829574 - 1829709
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||| ||||||||||||||| | || |||||||| ||||||||||||||||||||| |||||| ||| ||||||||||||| |||||    
T  1829574 gtcaaaattgaccaaaatgaccaaagatgcaaaggggctaaatcttagggggccaaaattgtagtttttatacttagggggtcaaaattgcaag-ttttt 1829672  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaaa 352  Q
    ||||||||| |||   |||||||||||||||| ||||    
T  1829673 aaaagttagggggaaaaaagtgcactttaaccaaaaa 1829709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 175 - 349
Target Start/End: Original strand, 7316224 - 7316397
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| |||||| || || ||||| |||||| ||||||||||||||||||||||||||||||| ||||||||| | || ||||||||||||||||||||    
T  7316224 aattaattacacacgtggcttgccacgtaggcgttgaataagtcaaaattgaccaaaaggaccatagatgcaaaggggctaaatcttaaggggccaaaat 7316323  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    ||| ||||   || ||| |||  |||||||||||| ||||| |||||||  ||||| ||||||||||||| ||||    
T  7316324 tgtggtttcaatatttagggggccaaaattgcaag-tttttgaaagttaaggggggaaaagtgcactttagccta 7316397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 216 - 345
Target Start/End: Original strand, 26575025 - 26575151
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||| | ||||||| ||||| |||||| |||  |||||||| |||||||||||||||||||||||||||||||| | ||||||||||| |||||    
T  26575025 gtcaaaattggcaaaaaggatcaaagttgcaaaggagttaaatcttagggggccaaaattgtagtttttgtacttaaggggttaaaattgcaag-ttttt 26575123  T
Q  316 aaaagttagagggggtaaagtgcactttaa 345  Q
     |||||||||| ||  ||||||||||||||    
T  26575124 gaaagttagagagg--aaagtgcactttaa 26575151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 182 - 344
Target Start/End: Complemental strand, 3721776 - 3721615
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    ||||||||| || |||||| |  || |||| || ||||||||||  |||||||||||||| |||||  | || ||||||||||||| | ||||| | |||    
T  3721776 tacacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaaggggtctaaattatggtt 3721677  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    || ||||||| ||| |||||||||||||| |||| |||||||||||||| |||||||||||||    
T  3721676 ttggtacttagggggtcaaaattgcaagt-ttttgaaagttagagggggaaaagtgcacttta 3721615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 182 - 350
Target Start/End: Complemental strand, 8659429 - 8659262
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    ||||||||| || |||||| |  || |||| || ||||||||||  |||||||||||||| |||||  | || |||||||| |||| | ||||||| |||    
T  8659429 tacacatgtggcatgccatatcagcgttgactaggtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggtt 8659330  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaa 350  Q
    || ||||||| |||  ||||||||||||| |||| |||||||||||||| ||||||||||||| |||||    
T  8659329 ttggtacttagggggccaaaattgcaagt-ttttgaaagttagagggggaaaagtgcactttagcctaa 8659262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 184 - 352
Target Start/End: Complemental strand, 17496960 - 17496788
Alignment:
Q  184 cacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatctta-aggggccaaaattgtagttt 282  Q
    ||||||| ||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||   |  ||||||||  ||||||||||||| |||||    
T  17496960 cacatgtggccagtcatgtaggcgttgaataagtcaaaattgatcaaaaggaccaaagatgcaaagaggttaaatcttaggggggccaaaattgcagttt 17496861  T
Q  283 ttgtacttaagggatcaaaattgcaagttttttaaaagtta----gagggggtaaagtgcactttaacctaaaa 352  Q
    |||||||||  || | ||||||| ||| ||||| |||||||    ||||||| ||| ||||||||| |||||||    
T  17496860 ttgtacttagagggttaaaattgtaag-tttttgaaagttagggggagggggaaaaatgcactttagcctaaaa 17496788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 228 - 351
Target Start/End: Complemental strand, 8821991 - 8821869
Alignment:
Q  228 caaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagg 327  Q
    |||||||||||||| |||||  |||| |||||||| |||| | ||||||| ||||| ||||||| |||  ||||||||||||| |||| |||||||||||    
T  8821991 caaaaggaccaaagttgcaatggagctaaatcttaggggggctaaattgtggttttggtacttagggggccaaaattgcaagt-ttttgaaagttagagg 8821893  T
Q  328 gggtaaagtgcactttaacctaaa 351  Q
    ||| ||||||||||||| ||||||    
T  8821892 gggaaaagtgcactttagcctaaa 8821869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 216 - 353
Target Start/End: Complemental strand, 26574748 - 26574613
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||||| |||| || ||||| |||||| | || ||||||||||||  |||||| ||||||||||||||||  || |||||||||||||| ||||    
T  26574748 gtcaaaattgacaaaaaagatcaaagttgcaaaggggctaaatcttaagggatcaaaat-gtagtttttgtacttagaggttcaaaattgcaagt-tttt 26574651  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaaat 353  Q
     ||||||||||| || ||| ||||||||| ||||||||    
T  26574650 gaaagttagaggtgggaaattgcactttagcctaaaat 26574613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 182 - 329
Target Start/End: Original strand, 10785851 - 10785996
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    |||||| || || ||||||||| ||||||| || ||||||||||   ||||||| ||||| |||||| | || |||||||||||||  ||||||||||||    
T  10785851 tacacacgtggcgtgccatgtatgcattgacta-gtcaaaattggtaaaaaggatcaaagttgcaaaggggctaaatcttaaggggttaaaattgtagtt 10785949  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggg 329  Q
    |||||||||| ||| | ||||||||||  |||||||||||||| ||||    
T  10785950 tttgtacttagggggttaaaattgcaa-atttttaaaagttagggggg 10785996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 217 - 351
Target Start/End: Original strand, 16704469 - 16704602
Alignment:
Q  217 tcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttta 316  Q
    ||||||||||| ||||||| || || ||||||   || ||||||||| ||  ||||||||||||||||||||||| ||| ||||||||||||| |||||     
T  16704469 tcaaaattgacaaaaaggatcatagttgcaaagaggctaaatcttaaaggatcaaaattgtagtttttgtacttagggggtcaaaattgcaag-tttttg 16704567  T
Q  317 aaagttagagggggtaaagtgcactttaacctaaa 351  Q
    |||||||  || || ||||||||||||| ||||||    
T  16704568 aaagttaagggaggaaaagtgcactttagcctaaa 16704602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 349
Target Start/End: Complemental strand, 27437958 - 27437826
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||| ||||||||||||||| |||||| |||| |||||||| |||| |||||||||||||||| |   || |||  ||||||||||| ||||||    
T  27437958 gtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaactttttt 27437859  T
Q  316 aaaagttagagggggtaaagtgcactttaaccta 349  Q
     |||||||  ||| | ||||||||||||| ||||    
T  27437858 -aaagttaaggggagaaaagtgcactttagccta 27437826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 349
Target Start/End: Original strand, 34834550 - 34834682
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||  |||||||||||||| |||||  | || |||||||| |||| | ||||||| |||||  |||||| | ||||||||||||||| |||||    
T  34834550 gtcaaaattggtcaaaaggaccaaagttgcaatggggctaaatcttaggggggctaaattgtggttttgatacttaggagatcaaaattgcaag-ttttt 34834648  T
Q  316 aaaagttagagggggtaaagtgcactttaaccta 349  Q
     |||||||| | ||| ||||||||||||||||||    
T  34834649 gaaagttagggagggaaaagtgcactttaaccta 34834682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 5658886 - 5658814
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtac 288  Q
    |||||||||||||||||||| ||||| |||||||| || ||||||||||||  ||||||||||||||||||||    
T  5658886 gtcaaaattgaccaaaaggatcaaagttgcaaatgggctaaatcttaagggatcaaaattgtagtttttgtac 5658814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 228 - 344
Target Start/End: Original strand, 8822776 - 8822891
Alignment:
Q  228 caaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagg 327  Q
    |||||||||||||| ||||| || || |||||||| |||| | ||||||| ||||| ||||||| ||| ||||||||||||| ||||| ||||||| ||     
T  8822776 caaaaggaccaaagttgcaattgggctaaatcttaggggggctaaattgtggttttggtacttagggggtcaaaattgcaag-tttttgaaagttaaaga 8822874  T
Q  328 gggtaaagtgcacttta 344  Q
    ||| |||||||||||||    
T  8822875 gggaaaagtgcacttta 8822891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 349
Target Start/End: Original strand, 14823585 - 14823679
Alignment:
Q  255 aaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    |||||||| ||||||||||||||||||| ||||||||||||   ||||||||||||||||||||| | || |||   ||||||||||||| ||||    
T  14823585 aaatcttagggggccaaaattgtagtttctgtacttaaggggctaaaattgcaagttttttaaaattaagggggaaaaaagtgcactttagccta 14823679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 229 - 349
Target Start/End: Complemental strand, 10784710 - 10784590
Alignment:
Q  229 aaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagg- 327  Q
    ||||||| ||||| |||||| | || |||||||  ||||||||||||||||||||| |||||| ||| | |||||||||||||||| ||||||||  ||     
T  10784710 aaaaggatcaaagttgcaaaggggctaaatctttgggggccaaaattgtagtttttatacttagggggttaaaattgcaagttttt-aaaagttaaggga 10784612  T
Q  328 gggtaaagtgcactttaaccta 349  Q
    ||| ||||||||||||| ||||    
T  10784611 gggaaaagtgcactttagccta 10784590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 352
Target Start/End: Original strand, 6842254 - 6842389
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||| ||||||||| ||||||||||||    | |||| ||||||  | |||||||||||||||| || || |||  ||||||||||| |||||     
T  6842254 gtcaaaattggccaaaaggatcaaagatgcaaacagactaaattttaaggaactaaaattgtagtttttgcacatagggggccaaaattgcaactttttg 6842353  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaaaa 352  Q
    |||  |||||||||| ||||||||||||| |||||||    
T  6842354 aaac-ttagagggggaaaagtgcactttagcctaaaa 6842389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 344
Target Start/End: Original strand, 8660175 - 8660301
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||  |||||||| ||||| |||||  |||| |||||||| |||| | ||||||| ||||| ||||||| ||| ||||||||||||| |||||    
T  8660175 gtcaaaattggtcaaaaggatcaaagttgcaatggagctaaatcttaggggggctaaattgtggttttggtacttagggg-tcaaaattgcaag-ttttt 8660272  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
     ||||||||  |||| |||||||||||||    
T  8660273 gaaagttaggaggggaaaagtgcacttta 8660301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 214 - 344
Target Start/End: Original strand, 12382680 - 12382809
Alignment:
Q  214 aagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttt 313  Q
    |||||||||||  | |||||||||||||||||||| | |  |||||||  |||  ||||||| |||||||  |||||| ||| |||||||| |||  |||    
T  12382680 aagtcaaaattagctaaaaggaccaaagatgcaaaagggttaaatctttggggatcaaaattatagttttaatacttagggggtcaaaattacaa-attt 12382778  T
Q  314 ttaaaagttagagggggtaaagtgcacttta 344  Q
    |||||| ||||||| || |||||||||||||    
T  12382779 ttaaaaattagaggtggaaaagtgcacttta 12382809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 352
Target Start/End: Complemental strand, 14822451 - 14822355
Alignment:
Q  255 aaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaaaa 352  Q
    |||||||| ||||||||||||||||||| | |||||| |||  ||||||||||||||||| |||| |||  ||| | |||||||||| || |||||||    
T  14822451 aaatcttagggggccaaaattgtagtttctatacttatggggccaaaattgcaagtttttgaaaa-ttaaggggtgaaaagtgcactctagcctaaaa 14822355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 216 - 276
Target Start/End: Original strand, 26717084 - 26717144
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattg 276  Q
    ||||||||||| |||||||| ||||| |||||| |||| ||||||||||||| ||||||||    
T  26717084 gtcaaaattgatcaaaaggatcaaagttgcaaaagagctaaatcttaaggggtcaaaattg 26717144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 7315916 - 7315963
Alignment:
Q  1 ttgacggtggagggaagttcggaatagatgtggttggattcttcttgg 48  Q
    |||||||||||||||||||| |||| |||||||| |||||||||||||    
T  7315916 ttgacggtggagggaagttcagaatcgatgtggtcggattcttcttgg 7315963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 271 - 352
Target Start/End: Original strand, 3722533 - 3722613
Alignment:
Q  271 aaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaaaa 352  Q
    ||||||| ||||| |||||||  || ||||||||||||| ||||| |||||||| | ||| ||||||||||||| |||||||    
T  3722533 aaattgtggttttggtacttagagggtcaaaattgcaag-tttttgaaagttagggagggaaaagtgcactttagcctaaaa 3722613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 16703658 - 16703600
Alignment:
Q  255 aaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||| ||| ||||| |||||||||||||||||| ||| || |||||||||||||||||||    
T  16703658 aaattttagggggctaaaattgtagtttttgtatttatgg-atcaaaattgcaagttttt 16703600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 349
Target Start/End: Original strand, 27322029 - 27322170
Alignment:
Q  206 cattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattg 305  Q
    |||||| | ||||||||| || ||||||||| ||| | ||||| | || || ||||| ||||  |||||||| ||||| ||||||| |||  ||||||||    
T  27322029 cattgactgagtcaaaatagagcaaaaggacgaaataagcaaaggggctaattcttagggggggaaaattgtggttttggtacttagggggccaaaattg 27322128  T
Q  306 caagttttttaaaagttagagggggtaaagtgcactttaaccta 349  Q
    ||||  |||| |||| ||| ||||| ||||||||||||| ||||    
T  27322129 caag-attttgaaagatag-gggggaaaagtgcactttagccta 27322170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 348
Target Start/End: Complemental strand, 29473240 - 29473076
Alignment:
Q  182 tacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtt 281  Q
    ||||||||| || ||||| |||||||||||    || ||||||||| ||||||| ||||  |||||| | ||||| ||||   |||||||||||||  ||    
T  29473240 tacacatgtggcatgccacgtaggcattgaccg-gtaaaaattgacaaaaaggatcaaaattgcaaaggggccaattcttggagggccaaaattgttatt 29473142  T
Q  282 tttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacct 348  Q
    ||||| | || || | |||||||||||  ||||||||| |||  ||||| ||||||||||| |||||    
T  29473141 tttgttcatagggaaccaaaattgcaa-ctttttaaaacttaaggggggaaaagtgcacttgaacct 29473076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 206 - 286
Target Start/End: Original strand, 3333486 - 3333566
Alignment:
Q  206 cattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgt 286  Q
    |||||| ||||||||||||| ||||||||| ||||| ||| || | || ||||| ||  |||  |||||||||||||||||    
T  3333486 cattgactaagtcaaaattggccaaaaggatcaaagttgcgaaggggctaaatcatagagggttaaaattgtagtttttgt 3333566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 30495695 - 30495767
Alignment:
Q  243 tgcaaatgagccaaatctta-aggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||||| || |||||||| |||||||||||||||  ||||||||| || ||||| ||||| |||| |||||    
T  30495695 tgcaaatgggctaaatcttagaggggccaaaattgttatttttgtacataggggattaaaatcgcaacttttt 30495767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1303 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 216 - 349
Target Start/End: Complemental strand, 1569 - 1437
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||||||||||||||||||||| || |||||||| |||| ||||||| |||||||| ||| || ||| |||||||||||||||||||    
T  1569 gtcaaaattgaccaaaaggaccaaagatgcaaatgggctaaatcttagggggtcaaaattatagtttttatacatagggggtcaaaattgcaagtttttt 1470  T
Q  316 aaaagttagagggggtaaagtgcactttaaccta 349  Q
     |||||||||||||| ||||| ||||||| ||||    
T  1469 -aaagttagagggggaaaagtacactttagccta 1437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 175 - 351
Target Start/End: Complemental strand, 19659 - 19484
Alignment:
Q  175 aattaagtacacatgtagcctgccatgtaggcattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaat 274  Q
    |||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||||| || |||||||||||| | |  |||||||| |||  ||||||    
T  19659 aattaattacacatgtggcctgccacgtaggcgttgaataagtcaaaattgaccaaaatgatcaaagatgcaaaggggttaaatcttaggggatcaaaat 19560  T
Q  275 tgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaaa 351  Q
    |||||||||| |||||| |||  |||||||||||| |||| |||| |||  ||||| ||| ||||||||| ||||||    
T  19559 tgtagtttttatacttagggggccaaaattgcaaggttttgaaaa-ttaaggggggaaaaatgcactttagcctaaa 19484  T

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Target: scaffold0019 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 216 - 344
Target Start/End: Complemental strand, 60220 - 60093
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||| ||||||||||||||| | || ||||| || |||| |||||||||||||||| ||| || ||| |||||||||||||| ||||    
T  60220 gtcaaaattgaccaaaaagaccaaagatgcaaaggggctaaatcatagggggtcaaaattgtagtttttatacatagggggtcaaaattgcaagt-tttt 60122  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
    |||||||||||| || |||||||||||||    
T  60121 aaaagttagaggaggaaaagtgcacttta 60093  T

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Target: scaffold0019; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 216 - 344
Target Start/End: Original strand, 61430 - 61557
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||||||||||||||||||| | || ||||| || |||||||||||| ||||||||||||||| |||   ||||||||||||||||     
T  61430 gtcaaaattgaccaaaaggaccaaagatgcaaaagggctaaatcatagggggccaaaattatagtttttgtacttagggggctaaaattgcaagtttttg 61529  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
    |||| |||  || || |||||||||||||    
T  61530 aaaa-ttaagggaggaaaagtgcacttta 61557  T

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Target: scaffold0294 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 216 - 350
Target Start/End: Original strand, 5409 - 5542
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||| |||||||||| ||||  || ||  | || ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||     
T  5409 gtcaaaattaaccaaaaggatcaaatttgtaatggggctaaatcttaagggggcaaaattgtagtttttgtacttaaggggtcaaaattgcaagtttttg 5508  T
Q  316 aaaagttagagggggtaaagtgcactttaacctaa 350  Q
    |||| |||| ||||| ||||||||||||| |||||    
T  5509 aaaa-ttagggggggaaaagtgcactttagcctaa 5542  T

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Target: scaffold0294; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 349
Target Start/End: Complemental strand, 4572 - 4440
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||| |||||||| |||||||  || ||  | || |||| ||| ||||  ||||||||| ||||||||||||||||   ||||||| ||||||||     
T  4572 gtcaaaatcgaccaaaatgaccaaatttgtaatggggctaaattttaggggggtaaaattgtaatttttgtacttaaggggctaaaattgtaagtttttg 4473  T
Q  316 aaaagttagagggggtaaagtgcactttaaccta 349  Q
    |||| |||| ||||  || |||||||||| ||||    
T  4472 aaaa-ttaggggggaaaatgtgcactttagccta 4440  T

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Target: scaffold0093 (Bit Score: 54; Significance: 7e-22; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 216 - 344
Target Start/End: Original strand, 2436 - 2562
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||||||  |||  |||||   ||| ||||| || ||||||||||| || ||||||||||||| ||| |||||||||||||||||||    
T  2436 gtcaaaattgaccaaaaggatgaaatttgcaatgtagctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagtttttt 2535  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
     ||||||  |||||| |||||||||||||    
T  2536 gaaagtt--agggggaaaagtgcacttta 2562  T

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Target: scaffold0093; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 216 - 344
Target Start/End: Original strand, 7059 - 7185
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||||||  |||  |||||   ||| ||||| || ||||||||||| || ||||||||||||| ||| |||||||||||||||||||    
T  7059 gtcaaaattgaccaaaaggatgaaatttgcaatgtagctaaatcgtagggggccaaaatggttgtttttgtacttagggggtcaaaattgcaagtttttt 7158  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
     ||||||  |||||| |||||||||||||    
T  7159 gaaagtt--agggggaaaagtgcacttta 7185  T

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Target: scaffold0003 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 216 - 349
Target Start/End: Original strand, 49404 - 49536
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    |||||||||| ||||||||||||||| |||||| |||| |||||||| |||| |||||||||||||||| |   || |||  ||||||||||| ||||||    
T  49404 gtcaaaattggccaaaaggaccaaagttgcaaaggagctaaatcttagggggtcaaaattgtagtttttatttatagggggccaaaattgcaactttttt 49503  T
Q  316 aaaagttagagggggtaaagtgcactttaaccta 349  Q
     |||||||  ||| | ||||||||||||| ||||    
T  49504 -aaagttaaggggagaaaagtgcactttagccta 49536  T

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Target: scaffold0302 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 216 - 344
Target Start/End: Original strand, 18747 - 18874
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||||||||| ||  |||| |||||  | || |||| |||||||||||||||| |||||||||||| || |||| |||||||||||  |||||    
T  18747 gtcaaaattgaccaaaatgattaaagttgcaatggggctaaattttaaggggccaaaattatagtttttgtacctaggggaccaaaattgcaa-attttt 18845  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
    |||||||||  |||  |||||||||||||    
T  18846 aaaagttaggagggaaaaagtgcacttta 18874  T

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Target: scaffold0302; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 264 - 350
Target Start/End: Complemental strand, 17552 - 17467
Alignment:
Q  264 ggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcactttaacctaa 350  Q
    |||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||  ||||  ||||||||||||| |||||    
T  17552 ggggccaaaattgtagtttttgtacttagggggccaaaattgcaagt-ttttaaaagttaagggggaaaaagtgcactttagcctaa 17467  T

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Target: scaffold0632 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 353
Target Start/End: Original strand, 3282 - 3414
Alignment:
Q  219 aaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaa 318  Q
    ||||||| | ||||||| ||||| |||||| | || |||||||| ||| |||||||| |||||||||||| || ||| ||||||||| ||| ||||| ||    
T  3282 aaaattggcaaaaaggatcaaagttgcaaaggggctaaatcttaggggaccaaaattatagtttttgtacctatggggtcaaaattgtaag-tttttgaa 3380  T
Q  319 agttagagggggtaaagtgcactttaacctaaaat 353  Q
    ||| || ||||| ||||||||||||| ||||||||    
T  3381 agtaag-gggggaaaagtgcactttagcctaaaat 3414  T

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Target: scaffold0112 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 344
Target Start/End: Complemental strand, 37238 - 37151
Alignment:
Q  255 aaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagttagagggggtaaagtgcacttta 344  Q
    ||||| || |||||||||||||| ||||||||||||| ||| |||||||||||| |||||||||||  | |||||| |||||||||||||    
T  37238 aaatcgtagggggccaaaattgttgtttttgtacttagggggtcaaaattgcaaattttttaaaag--atagggggaaaagtgcacttta 37151  T

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Target: scaffold2034 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 216 - 323
Target Start/End: Original strand, 949 - 1055
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||   |||||||||||| ||||||| | || || ||||  |||||||||||| |||||||||||| ||||||| |||||||||||  |||||    
T  949 gtcaaaattgggaaaaaggaccaaatatgcaaaggggctaattcttggggggccaaaattatagtttttgtacataagggaccaaaattgcaa-cttttt 1047  T
Q  316 aaaagtta 323  Q
    ||||||||    
T  1048 aaaagtta 1055  T

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Target: scaffold2034; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 216 - 344
Target Start/End: Complemental strand, 363 - 236
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagtttttt 315  Q
    ||||||||||   ||||||| |||| ||||||| | || || ||||| ||| |||||||| |||||||||||| || |||| |||||||||||  |||||    
T  363 gtcaaaattgggaaaaaggatcaaatatgcaaaggggctaattcttaggggaccaaaattatagtttttgtacataggggaccaaaattgcaa-cttttt 265  T
Q  316 aaaagttagagggggtaaagtgcacttta 344  Q
     |||||||  ||||| |||||||||||||    
T  264 gaaagttaagggggggaaagtgcacttta 236  T

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Target: scaffold0586 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 6461 - 6401
Alignment:
Q  228 caaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtac 288  Q
    |||||||||||||||||||||   || |||||||| |||| ||||||||||||||||||||    
T  6461 caaaaggaccaaagatgcaaaaaggctaaatcttagggggtcaaaattgtagtttttgtac 6401  T

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Target: scaffold0586; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 8994 - 9069
Alignment:
Q  212 ataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtac 288  Q
    ||||||||||||||  |||||||| ||||||||||   | || |||||||| |||||||||||||||||||||||||    
T  8994 ataagtcaaaattggtcaaaaggatcaaagatgcatgagggctaaatctta-ggggccaaaattgtagtttttgtac 9069  T

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Target: scaffold0049 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 224 - 344
Target Start/End: Original strand, 7394 - 7513
Alignment:
Q  224 tgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttttaaaagtta 323  Q
    |||| ||||||| ||||| |||||| | || |||||||| |||| |||||||||||||| ||||| || ||| ||||||| | ||  ||||| ||| |||    
T  7394 tgactaaaaggatcaaagttgcaaaggggctaaatcttagggggtcaaaattgtagtttctgtacatagggggtcaaaatcgtaa-ctttttcaaactta 7492  T
Q  324 gagggggtaaagtgcacttta 344  Q
    |||||||  ||||||||||||    
T  7493 gagggggacaagtgcacttta 7513  T

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Target: scaffold0049; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 283
Target Start/End: Original strand, 7880 - 7957
Alignment:
Q  206 cattgaataagtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttt 283  Q
    |||||| ||||||||||||| ||||||||| ||||| |||||| | || ||||| || ||||  |||||| |||||||    
T  7880 cattgactaagtcaaaattggccaaaaggatcaaagttgcaaaggggctaaatcatagggggttaaaattctagtttt 7957  T

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Target: scaffold0045 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 314
Target Start/End: Complemental strand, 48436 - 48341
Alignment:
Q  216 gtcaaaattgaccaaaaggaccaaagatgcaaatgagccaaatcttaaggggccaaaattgtagtttttgtacttaagggatcaaaattgcaagttttt 314  Q
    |||||||||||||||| |||||||||||||||| |    |||||||| ||| |||||||| |||||||||||| | |||| || |||||||||||||||    
T  48436 gtcaaaattgaccaaa-ggaccaaagatgcaaagggaataaatcttaggggaccaaaattatagtttttgtacat-aggggtc-aaattgcaagttttt 48341  T

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