View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20641_high_16 (Length: 207)
Name: NF20641_high_16
Description: NF20641
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20641_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 12 - 189
Target Start/End: Complemental strand, 30808521 - 30808344
Alignment:
| Q |
12 |
agcacagacaatgttgggctcaagctgcaaagatggaaaacagggttaatatttcttatttgagtgaaagttaatgctacaaattcaaaattctaatttt |
111 |
Q |
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| T |
30808521 |
agcacagacaacgttgggctcaagctgcaaagatggaaaacagggttaatatttcttatttgagtgaaagttaatgctacaaattcaaaattctaatttt |
30808422 |
T |
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| Q |
112 |
caataataccttctcagcctcgtcaatgtattctttggcacgatccagttgtaagagaccaaggtggcagagacacaa |
189 |
Q |
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| T |
30808421 |
caataataccttctcagcctcgtcaatgtattctttggcacgatccagttgtaagagaccaaggtggcagagacacaa |
30808344 |
T |
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