View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20643_low_7 (Length: 246)
Name: NF20643_low_7
Description: NF20643
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20643_low_7 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 5 - 246
Target Start/End: Original strand, 38821940 - 38822184
Alignment:
| Q |
5 |
gaagaatattctaattgacatcaataacaaagatttcaaaattaaaaaagccaccaaagttctatttcagtatctaagaaccatgacgtaagacaatatg |
104 |
Q |
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| T |
38821940 |
gaagaatattccaattgacatcaataacaaagattgcaaaatttaaaaagccaccaaagttctatttcagtatctaagaaccatgacgtaagacaatatg |
38822039 |
T |
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| Q |
105 |
gataaactgttgaagttcaatgtttcaccttcctacctgaagatactatcaaccatgtgatgaatttcat---ataataagattgtattataatgtcttg |
201 |
Q |
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| T |
38822040 |
gataaactgttgaagttcaatgtttcaccttcctacctgaagatactatcaaccacgtgatgaatttcatataataataagattgtattataatgtcttg |
38822139 |
T |
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| Q |
202 |
gtcctttaatcaattaataatcttatcgttagtacttgactaaac |
246 |
Q |
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| T |
38822140 |
gtcctttaatcaattaataatcttatcgttagtacttgactaaac |
38822184 |
T |
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