View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20645_low_8 (Length: 462)

Name: NF20645_low_8
Description: NF20645
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20645_low_8
NF20645_low_8
[»] chr3 (79 HSPs)
chr3 (127-300)||(25636036-25636213)
chr3 (332-462)||(14626311-14626447)
chr3 (127-300)||(25616243-25616416)
chr3 (332-462)||(41944051-41944187)
chr3 (110-300)||(25620538-25620728)
chr3 (332-462)||(27812570-27812706)
chr3 (328-462)||(35747867-35748007)
chr3 (332-462)||(20209153-20209289)
chr3 (332-462)||(44664796-44664932)
chr3 (329-462)||(44920073-44920212)
chr3 (332-462)||(11220995-11221131)
chr3 (332-462)||(14201971-14202107)
chr3 (328-462)||(29434476-29434616)
chr3 (332-462)||(45567411-45567547)
chr3 (332-462)||(2862704-2862840)
chr3 (332-462)||(18677916-18678052)
chr3 (332-462)||(28843907-28844043)
chr3 (332-462)||(32809157-32809293)
chr3 (390-462)||(11439975-11440047)
chr3 (390-462)||(14463189-14463261)
chr3 (23-99)||(25635928-25636004)
chr3 (334-462)||(15543174-15543308)
chr3 (332-462)||(49002240-49002374)
chr3 (332-462)||(18168929-18169065)
chr3 (332-462)||(26845065-26845201)
chr3 (332-462)||(38674984-38675120)
chr3 (390-462)||(11989690-11989762)
chr3 (390-462)||(21016988-21017060)
chr3 (94-173)||(25624835-25624915)
chr3 (390-462)||(39778346-39778418)
chr3 (402-462)||(44036861-44036921)
chr3 (338-462)||(45171587-45171717)
chr3 (332-462)||(45214379-45214516)
chr3 (388-462)||(45539897-45539971)
chr3 (332-462)||(25061304-25061439)
chr3 (332-462)||(44976756-44976892)
chr3 (328-462)||(53712250-53712390)
chr3 (155-246)||(25625823-25625917)
chr3 (406-462)||(43378213-43378269)
chr3 (390-462)||(46292757-46292829)
chr3 (332-457)||(50711171-50711306)
chr3 (332-462)||(6954172-6954308)
chr3 (390-460)||(36546257-36546327)
chr3 (390-460)||(36561987-36562057)
chr3 (423-462)||(31574353-31574392)
chr3 (194-252)||(25628103-25628161)
chr3 (328-386)||(29434300-29434358)
chr3 (332-386)||(44664624-44664678)
chr3 (328-376)||(11221259-11221307)
chr3 (332-376)||(11989518-11989562)
chr3 (390-462)||(15020448-15020520)
chr3 (426-462)||(18461795-18461831)
chr3 (332-372)||(21017196-21017236)
chr3 (332-376)||(31574520-31574564)
chr3 (332-372)||(39778550-39778590)
chr3 (332-372)||(46292585-46292625)
chr3 (218-253)||(25616558-25616593)
chr3 (329-372)||(36229763-36229806)
chr3 (390-430)||(2397853-2397893)
chr3 (390-430)||(2579162-2579202)
chr3 (328-372)||(3612594-3612638)
chr3 (332-372)||(8851807-8851847)
chr3 (332-372)||(11121585-11121625)
chr3 (332-372)||(14463394-14463434)
chr3 (328-372)||(15542998-15543042)
chr3 (332-376)||(18461619-18461663)
chr3 (332-372)||(22316723-22316763)
chr3 (332-372)||(22317022-22317062)
chr3 (332-372)||(22975348-22975388)
chr3 (332-372)||(22975647-22975687)
chr3 (332-372)||(28829756-28829796)
chr3 (344-372)||(33491617-33491645)
chr3 (332-372)||(37513393-37513433)
chr3 (332-372)||(48434105-48434145)
chr3 (332-372)||(49621281-49621321)
chr3 (332-372)||(49711404-49711444)
chr3 (390-442)||(50176606-50176658)
chr3 (332-372)||(50710895-50710935)
chr3 (332-372)||(50711127-50711167)
[»] chr7 (70 HSPs)
chr7 (332-462)||(7172934-7173070)
chr7 (328-462)||(8805919-8806059)
chr7 (332-462)||(45055497-45055633)
chr7 (332-462)||(12423848-12423984)
chr7 (332-462)||(11337895-11338031)
chr7 (332-462)||(19124834-19124970)
chr7 (336-462)||(38494921-38495053)
chr7 (332-462)||(41922457-41922593)
chr7 (332-462)||(44457959-44458095)
chr7 (332-462)||(16861045-16861180)
chr7 (332-462)||(20121209-20121344)
chr7 (332-462)||(41857316-41857451)
chr7 (332-462)||(19104277-19104412)
chr7 (332-462)||(34287519-34287655)
chr7 (332-462)||(45867448-45867584)
chr7 (332-462)||(46426664-46426800)
chr7 (332-462)||(47221710-47221846)
chr7 (390-462)||(2699684-2699756)
chr7 (390-462)||(32165396-32165468)
chr7 (332-462)||(8522327-8522463)
chr7 (332-462)||(24331554-24331691)
chr7 (332-462)||(49023580-49023717)
chr7 (388-462)||(17173264-17173338)
chr7 (332-462)||(21455729-21455865)
chr7 (332-462)||(21733243-21733379)
chr7 (332-462)||(23036650-23036786)
chr7 (332-462)||(31813733-31813869)
chr7 (332-462)||(42391471-42391607)
chr7 (390-462)||(7149466-7149538)
chr7 (388-462)||(8949467-8949541)
chr7 (333-462)||(21626938-21627072)
chr7 (392-462)||(43575131-43575201)
chr7 (401-462)||(11682000-11682061)
chr7 (390-462)||(45062129-45062201)
chr7 (333-462)||(46738268-46738403)
chr7 (343-462)||(10543586-10543711)
chr7 (413-462)||(31115888-31115937)
chr7 (332-462)||(31283329-31283464)
chr7 (388-457)||(49114342-49114411)
chr7 (352-457)||(32064569-32064680)
chr7 (328-376)||(8522579-8522627)
chr7 (328-386)||(2933285-2933343)
chr7 (394-462)||(48765928-48765997)
chr7 (328-376)||(11338159-11338207)
chr7 (332-376)||(31115840-31115884)
chr7 (328-372)||(32178157-32178201)
chr7 (332-376)||(45055325-45055369)
chr7 (332-372)||(47221966-47222006)
chr7 (329-372)||(7149291-7149334)
chr7 (323-386)||(29099431-29099494)
chr7 (332-379)||(31813982-31814029)
chr7 (330-462)||(41749581-41749719)
chr7 (328-386)||(7173188-7173246)
chr7 (331-372)||(12424117-12424158)
chr7 (344-372)||(2933571-2933599)
chr7 (332-372)||(7417814-7417854)
chr7 (328-372)||(8805743-8805787)
chr7 (340-372)||(17173364-17173396)
chr7 (332-372)||(19305743-19305783)
chr7 (332-372)||(28408543-28408583)
chr7 (390-430)||(32072047-32072087)
chr7 (332-372)||(32523505-32523545)
chr7 (328-372)||(32832536-32832580)
chr7 (332-372)||(38495185-38495225)
chr7 (332-372)||(41922285-41922325)
chr7 (332-372)||(42391299-42391339)
chr7 (332-372)||(43575321-43575361)
chr7 (332-372)||(43699925-43699965)
chr7 (332-372)||(45062333-45062373)
chr7 (332-372)||(49114165-49114205)
[»] chr4 (84 HSPs)
chr4 (332-462)||(32488587-32488723)
chr4 (332-462)||(20983917-20984053)
chr4 (332-462)||(23572604-23572740)
chr4 (332-462)||(25331818-25331956)
chr4 (332-462)||(44551090-44551226)
chr4 (332-458)||(31857585-31857716)
chr4 (325-462)||(9902649-9902792)
chr4 (332-459)||(39791920-39792053)
chr4 (332-462)||(44834982-44835112)
chr4 (332-462)||(52653934-52654071)
chr4 (332-462)||(5747878-5748014)
chr4 (332-462)||(15516480-15516616)
chr4 (328-462)||(26842975-26843114)
chr4 (332-462)||(32922242-32922378)
chr4 (332-462)||(35130971-35131107)
chr4 (332-462)||(54036867-54037003)
chr4 (332-462)||(54997032-54997166)
chr4 (390-462)||(10993800-10993871)
chr4 (390-462)||(26948159-26948231)
chr4 (323-462)||(45801213-45801357)
chr4 (329-462)||(52537879-52538018)
chr4 (332-462)||(16530493-16530629)
chr4 (332-462)||(45655696-45655832)
chr4 (332-462)||(46648072-46648208)
chr4 (390-462)||(26886677-26886749)
chr4 (332-444)||(43264080-43264198)
chr4 (388-462)||(18568090-18568164)
chr4 (333-462)||(23963022-23963158)
chr4 (332-459)||(49498428-49498561)
chr4 (332-462)||(16020132-16020268)
chr4 (332-462)||(36868035-36868171)
chr4 (401-462)||(41935668-41935729)
chr4 (331-462)||(9644754-9644896)
chr4 (390-462)||(22539754-22539826)
chr4 (332-461)||(53563299-53563434)
chr4 (332-462)||(41376759-41376895)
chr4 (410-462)||(7067329-7067381)
chr4 (390-462)||(17362366-17362437)
chr4 (328-376)||(17688019-17688067)
chr4 (390-462)||(50512662-50512734)
chr4 (395-462)||(18635912-18635979)
chr4 (411-462)||(32188002-32188053)
chr4 (328-386)||(26842799-26842857)
chr4 (390-462)||(46674766-46674838)
chr4 (332-386)||(31857838-31857892)
chr4 (332-376)||(10993628-10993672)
chr4 (332-376)||(16530321-16530365)
chr4 (332-372)||(18568297-18568337)
chr4 (332-372)||(37068688-37068728)
chr4 (390-462)||(38556117-38556189)
chr4 (332-372)||(45655963-45656003)
chr4 (328-372)||(50161114-50161158)
chr4 (329-376)||(39792186-39792233)
chr4 (330-418)||(42009438-42009532)
chr4 (412-462)||(5618209-5618259)
chr4 (332-386)||(7067499-7067553)
chr4 (332-386)||(16019960-16020014)
chr4 (332-386)||(21053584-21053638)
chr4 (332-386)||(22539945-22539998)
chr4 (420-462)||(24270459-24270501)
chr4 (397-442)||(41905950-41905995)
chr4 (332-372)||(3546793-3546833)
chr4 (332-372)||(9525808-9525848)
chr4 (332-372)||(13294905-13294945)
chr4 (332-372)||(20930978-20931018)
chr4 (332-372)||(20931280-20931320)
chr4 (332-372)||(20984185-20984225)
chr4 (332-372)||(23163284-23163324)
chr4 (332-372)||(23163582-23163622)
chr4 (331-367)||(23572877-23572913)
chr4 (332-372)||(26202525-26202565)
chr4 (328-372)||(30799291-30799335)
chr4 (332-372)||(32922070-32922110)
chr4 (332-372)||(33369512-33369552)
chr4 (332-372)||(33692265-33692305)
chr4 (332-372)||(37872770-37872810)
chr4 (332-372)||(41689392-41689432)
chr4 (332-372)||(46143573-46143613)
chr4 (332-372)||(49621442-49621482)
chr4 (332-372)||(49621740-49621780)
chr4 (332-372)||(50161419-50161459)
chr4 (332-372)||(52538150-52538190)
chr4 (332-372)||(52654203-52654243)
chr4 (332-372)||(55742624-55742664)
[»] chr1 (75 HSPs)
chr1 (328-462)||(26874402-26874542)
chr1 (334-462)||(45315431-45315565)
chr1 (332-462)||(5586490-5586626)
chr1 (332-462)||(34480359-34480495)
chr1 (332-462)||(6489047-6489183)
chr1 (328-462)||(730974-731114)
chr1 (390-462)||(28554365-28554437)
chr1 (332-462)||(39673011-39673147)
chr1 (332-462)||(45286235-45286371)
chr1 (336-462)||(5618246-5618378)
chr1 (332-462)||(8853270-8853406)
chr1 (328-462)||(33471415-33471550)
chr1 (323-462)||(1501694-1501839)
chr1 (332-462)||(12650097-12650233)
chr1 (332-457)||(17191201-17191333)
chr1 (332-462)||(17504218-17504354)
chr1 (332-462)||(40934419-40934557)
chr1 (332-462)||(44344199-44344335)
chr1 (390-462)||(40770207-40770279)
chr1 (332-462)||(48524666-48524801)
chr1 (388-462)||(50312070-50312144)
chr1 (332-462)||(30146234-30146370)
chr1 (390-462)||(16515701-16515773)
chr1 (332-462)||(32694312-32694447)
chr1 (388-462)||(46283467-46283541)
chr1 (390-462)||(3459810-3459882)
chr1 (390-462)||(4695003-4695075)
chr1 (390-462)||(8828754-8828826)
chr1 (394-462)||(27547013-27547081)
chr1 (329-462)||(8641120-8641261)
chr1 (391-462)||(9877471-9877542)
chr1 (388-462)||(10296767-10296840)
chr1 (390-462)||(48970766-48970839)
chr1 (332-459)||(24234715-24234847)
chr1 (332-462)||(50208361-50208498)
chr1 (328-386)||(8828575-8828633)
chr1 (405-462)||(45569086-45569143)
chr1 (390-462)||(43726380-43726452)
chr1 (329-376)||(40770407-40770454)
chr1 (329-376)||(40934685-40934732)
chr1 (328-442)||(48970895-48971012)
chr1 (332-393)||(17504038-17504099)
chr1 (332-442)||(39672839-39672955)
chr1 (401-457)||(14465070-14465126)
chr1 (390-462)||(16087040-16087112)
chr1 (328-372)||(25780191-25780235)
chr1 (332-372)||(35521478-35521518)
chr1 (390-462)||(49021734-49021805)
chr1 (332-386)||(730802-730856)
chr1 (328-386)||(16515891-16515949)
chr1 (388-454)||(24506549-24506615)
chr1 (332-386)||(30563072-30563126)
chr1 (332-373)||(44344026-44344067)
chr1 (332-372)||(2026724-2026764)
chr1 (332-372)||(4695207-4695247)
chr1 (332-372)||(5586758-5586798)
chr1 (332-372)||(5618074-5618114)
chr1 (332-372)||(6488874-6488914)
chr1 (332-372)||(7113868-7113908)
chr1 (332-372)||(8853099-8853139)
chr1 (328-372)||(10296591-10296635)
chr1 (332-372)||(12139327-12139367)
chr1 (332-372)||(12649925-12649965)
chr1 (328-372)||(17985286-17985330)
chr1 (426-462)||(25012751-25012787)
chr1 (332-372)||(25012918-25012958)
chr1 (332-372)||(26095761-26095801)
chr1 (390-462)||(27065320-27065391)
chr1 (332-372)||(27067202-27067242)
chr1 (332-372)||(28554193-28554233)
chr1 (332-372)||(31289257-31289297)
chr1 (332-372)||(34480187-34480227)
chr1 (332-372)||(40902330-40902370)
chr1 (332-372)||(43726216-43726256)
chr1 (390-462)||(48173639-48173711)
[»] chr8 (56 HSPs)
chr8 (332-462)||(10925277-10925413)
chr8 (332-462)||(27712767-27712903)
chr8 (332-462)||(30253801-30253937)
chr8 (332-462)||(21660902-21661038)
chr8 (332-462)||(28828391-28828527)
chr8 (332-462)||(30463917-30464053)
chr8 (332-462)||(34632228-34632364)
chr8 (332-462)||(37727202-37727338)
chr8 (328-462)||(1235583-1235723)
chr8 (331-455)||(34213387-34213517)
chr8 (332-462)||(4968185-4968322)
chr8 (332-462)||(9887137-9887274)
chr8 (332-462)||(26938361-26938495)
chr8 (332-462)||(29596405-29596541)
chr8 (332-462)||(34199010-34199146)
chr8 (329-462)||(42684963-42685102)
chr8 (328-462)||(8156708-8156847)
chr8 (332-462)||(18805749-18805884)
chr8 (333-462)||(17494898-17495033)
chr8 (332-462)||(39198792-39198927)
chr8 (332-434)||(35560859-35560967)
chr8 (390-462)||(29726702-29726774)
chr8 (332-462)||(43497382-43497513)
chr8 (332-462)||(33278938-33279075)
chr8 (390-462)||(36556602-36556674)
chr8 (395-462)||(26187200-26187267)
chr8 (332-462)||(2241474-2241610)
chr8 (336-460)||(38655018-38655148)
chr8 (328-376)||(18806012-18806060)
chr8 (414-462)||(33527115-33527163)
chr8 (413-462)||(40277397-40277446)
chr8 (332-376)||(148296-148340)
chr8 (390-430)||(2241682-2241722)
chr8 (390-462)||(12649655-12649727)
chr8 (332-386)||(13327265-13327319)
chr8 (332-386)||(42684790-42684844)
chr8 (390-462)||(18929769-18929839)
chr8 (332-430)||(26187335-26187439)
chr8 (332-372)||(2968172-2968212)
chr8 (328-376)||(7672639-7672687)
chr8 (332-372)||(14577168-14577208)
chr8 (332-376)||(17494767-17494811)
chr8 (332-372)||(17875771-17875811)
chr8 (332-372)||(17876072-17876112)
chr8 (332-372)||(21660729-21660769)
chr8 (332-372)||(27713035-27713075)
chr8 (332-372)||(27912400-27912440)
chr8 (332-372)||(27958819-27958859)
chr8 (332-376)||(28828219-28828263)
chr8 (332-372)||(30253629-30253669)
chr8 (332-372)||(30904662-30904702)
chr8 (332-372)||(33279209-33279249)
chr8 (328-372)||(34632496-34632540)
chr8 (332-372)||(35482705-35482745)
chr8 (332-372)||(35483004-35483044)
chr8 (332-372)||(39198618-39198658)
[»] chr2 (67 HSPs)
chr2 (332-462)||(10714011-10714147)
chr2 (332-462)||(2450091-2450227)
chr2 (390-462)||(22486062-22486134)
chr2 (328-462)||(9911908-9912051)
chr2 (332-462)||(44490307-44490443)
chr2 (323-462)||(17549062-17549208)
chr2 (332-462)||(9027200-9027336)
chr2 (332-462)||(26499586-26499722)
chr2 (332-462)||(10192087-10192224)
chr2 (328-459)||(3889049-3889186)
chr2 (331-462)||(11724792-11724929)
chr2 (332-462)||(23926394-23926530)
chr2 (332-462)||(28789042-28789178)
chr2 (337-462)||(29421701-29421832)
chr2 (390-462)||(42950586-42950658)
chr2 (336-462)||(13421249-13421384)
chr2 (332-459)||(30488258-30488391)
chr2 (332-462)||(341487-341623)
chr2 (332-462)||(40657303-40657439)
chr2 (390-462)||(1650570-1650642)
chr2 (332-462)||(33274398-33274536)
chr2 (332-462)||(1270112-1270248)
chr2 (332-462)||(15461258-15461394)
chr2 (332-462)||(18449528-18449664)
chr2 (332-462)||(29154238-29154374)
chr2 (332-462)||(29174925-29175063)
chr2 (332-462)||(35411880-35412016)
chr2 (332-462)||(42030542-42030678)
chr2 (390-462)||(31556814-31556886)
chr2 (332-462)||(22899194-22899330)
chr2 (332-457)||(1479031-1479162)
chr2 (390-462)||(11122711-11122783)
chr2 (411-462)||(11723881-11723932)
chr2 (332-442)||(33274592-33274708)
chr2 (352-462)||(37528082-37528195)
chr2 (406-457)||(14121732-14121783)
chr2 (332-424)||(29154067-29154165)
chr2 (395-462)||(16350767-16350836)
chr2 (393-459)||(30842137-30842203)
chr2 (328-386)||(44536473-44536531)
chr2 (332-462)||(3321999-3322135)
chr2 (331-462)||(22195926-22196062)
chr2 (328-376)||(23926658-23926706)
chr2 (332-437)||(38574818-38574929)
chr2 (332-393)||(601614-601675)
chr2 (332-377)||(15461521-15461566)
chr2 (332-372)||(1650774-1650814)
chr2 (332-372)||(2318792-2318832)
chr2 (406-462)||(2415500-2415556)
chr2 (328-372)||(4261152-4261196)
chr2 (332-372)||(9320105-9320145)
chr2 (332-372)||(9912184-9912224)
chr2 (332-372)||(10044748-10044788)
chr2 (332-372)||(10108816-10108856)
chr2 (332-372)||(10714279-10714319)
chr2 (332-372)||(11723708-11723748)
chr2 (390-462)||(14951871-14951943)
chr2 (332-372)||(17846011-17846051)
chr2 (390-462)||(18508630-18508702)
chr2 (332-372)||(18916628-18916668)
chr2 (390-462)||(19079434-19079506)
chr2 (332-372)||(20663929-20663969)
chr2 (332-372)||(26499425-26499465)
chr2 (332-372)||(27360424-27360464)
chr2 (332-376)||(30488083-30488127)
chr2 (390-434)||(31556950-31556994)
chr2 (332-372)||(35412148-35412188)
[»] chr6 (46 HSPs)
chr6 (332-462)||(14655079-14655215)
chr6 (332-462)||(9220106-9220242)
chr6 (332-462)||(24896347-24896484)
chr6 (388-462)||(8488037-8488111)
chr6 (332-462)||(1925119-1925255)
chr6 (332-462)||(9546586-9546722)
chr6 (332-462)||(9899198-9899334)
chr6 (328-462)||(3105779-3105919)
chr6 (330-462)||(685128-685266)
chr6 (332-462)||(17853818-17853954)
chr6 (332-462)||(25121672-25121808)
chr6 (332-462)||(28852191-28852327)
chr6 (332-462)||(22568766-22568902)
chr6 (390-462)||(1136920-1136992)
chr6 (390-462)||(2316556-2316628)
chr6 (390-462)||(20027840-20027912)
chr6 (332-462)||(12240483-12240619)
chr6 (332-462)||(13178398-13178534)
chr6 (390-462)||(2863755-2863827)
chr6 (390-462)||(2883058-2883130)
chr6 (332-459)||(32557313-32557448)
chr6 (328-462)||(13853317-13853456)
chr6 (390-462)||(21926239-21926311)
chr6 (332-461)||(24335536-24335673)
chr6 (411-462)||(3012088-3012139)
chr6 (332-462)||(24325167-24325304)
chr6 (388-462)||(8129598-8129672)
chr6 (332-462)||(11361792-11361928)
chr6 (332-434)||(21926067-21926175)
chr6 (390-462)||(4137397-4137469)
chr6 (328-372)||(22569034-22569078)
chr6 (328-376)||(684952-685000)
chr6 (390-438)||(12109590-12109638)
chr6 (332-386)||(6755205-6755259)
chr6 (332-386)||(33595322-33595376)
chr6 (332-372)||(1925422-1925462)
chr6 (332-372)||(2316760-2316800)
chr6 (332-372)||(3218154-3218194)
chr6 (332-372)||(3218443-3218483)
chr6 (332-372)||(3922542-3922582)
chr6 (332-372)||(3922841-3922881)
chr6 (332-372)||(4243225-4243265)
chr6 (332-372)||(9899466-9899506)
chr6 (332-372)||(23068699-23068739)
chr6 (332-376)||(24324995-24325039)
chr6 (332-372)||(33595622-33595662)
[»] chr5 (66 HSPs)
chr5 (333-462)||(37092183-37092318)
chr5 (332-462)||(13455851-13455985)
chr5 (332-462)||(5239453-5239588)
chr5 (390-462)||(8357240-8357312)
chr5 (328-462)||(2426404-2426545)
chr5 (332-462)||(32771994-32772130)
chr5 (332-462)||(33429708-33429844)
chr5 (332-430)||(14729451-14729552)
chr5 (332-462)||(1098895-1099031)
chr5 (332-462)||(1643542-1643678)
chr5 (332-462)||(2467062-2467198)
chr5 (332-462)||(3279189-3279327)
chr5 (328-462)||(7610262-7610402)
chr5 (332-462)||(42610956-42611092)
chr5 (332-462)||(22621060-22621186)
chr5 (390-462)||(37943700-37943772)
chr5 (390-462)||(40952243-40952315)
chr5 (328-462)||(14871909-14872050)
chr5 (332-462)||(3974216-3974352)
chr5 (332-462)||(16736978-16737114)
chr5 (336-462)||(19130877-19131009)
chr5 (388-461)||(19984436-19984509)
chr5 (332-462)||(31485960-31486096)
chr5 (390-462)||(12854642-12854714)
chr5 (332-462)||(24858578-24858714)
chr5 (390-462)||(34159244-34159316)
chr5 (332-462)||(2960897-2961033)
chr5 (332-462)||(2969365-2969501)
chr5 (332-462)||(7601596-7601732)
chr5 (390-462)||(13697385-13697457)
chr5 (390-462)||(30129648-30129720)
chr5 (411-462)||(6540073-6540124)
chr5 (420-462)||(18707445-18707487)
chr5 (390-462)||(33381604-33381675)
chr5 (390-462)||(35160603-35160675)
chr5 (390-452)||(13577332-13577394)
chr5 (332-386)||(22621304-22621358)
chr5 (332-442)||(2426232-2426348)
chr5 (397-458)||(13298025-13298085)
chr5 (419-462)||(261240-261283)
chr5 (332-386)||(2094861-2094915)
chr5 (332-374)||(2467328-2467370)
chr5 (332-386)||(6541466-6541520)
chr5 (331-372)||(1643810-1643851)
chr5 (397-462)||(6647239-6647304)
chr5 (413-462)||(23226698-23226747)
chr5 (332-372)||(3168097-3168137)
chr5 (332-372)||(3279459-3279499)
chr5 (332-372)||(7601864-7601904)
chr5 (332-372)||(12854847-12854887)
chr5 (332-372)||(14871737-14871777)
chr5 (332-372)||(16736804-16736844)
chr5 (332-372)||(18485662-18485702)
chr5 (332-372)||(19131141-19131181)
chr5 (332-372)||(24858406-24858446)
chr5 (332-376)||(30129478-30129522)
chr5 (332-372)||(30370514-30370554)
chr5 (332-372)||(32936508-32936548)
chr5 (328-376)||(33429532-33429580)
chr5 (332-372)||(35362987-35363027)
chr5 (332-372)||(35363292-35363332)
chr5 (332-372)||(37093746-37093786)
chr5 (332-372)||(39589618-39589658)
chr5 (332-372)||(40833939-40833979)
chr5 (332-372)||(40834238-40834278)
chr5 (332-372)||(40952070-40952110)
[»] scaffold0009 (1 HSPs)
scaffold0009 (390-462)||(258822-258894)
[»] scaffold0077 (2 HSPs)
scaffold0077 (332-462)||(10094-10230)
scaffold0077 (332-370)||(9924-9962)
[»] scaffold0200 (2 HSPs)
scaffold0200 (390-462)||(4537-4609)
scaffold0200 (329-363)||(4358-4392)
[»] scaffold0029 (2 HSPs)
scaffold0029 (390-462)||(73440-73512)
scaffold0029 (332-372)||(136919-136959)
[»] scaffold0119 (1 HSPs)
scaffold0119 (332-462)||(41454-41590)
[»] scaffold0024 (1 HSPs)
scaffold0024 (390-462)||(107924-107995)
[»] scaffold0019 (1 HSPs)
scaffold0019 (390-462)||(44937-45009)
[»] scaffold0003 (1 HSPs)
scaffold0003 (390-462)||(323494-323566)
[»] scaffold0592 (1 HSPs)
scaffold0592 (390-462)||(8455-8527)
[»] scaffold0005 (1 HSPs)
scaffold0005 (411-462)||(257780-257831)
[»] scaffold0002 (1 HSPs)
scaffold0002 (332-372)||(330200-330240)


Alignment Details
Target: chr3 (Bit Score: 101; Significance: 7e-50; HSPs: 79)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 127 - 300
Target Start/End: Original strand, 25636036 - 25636213
Alignment:
Q  127 tgttggataaagatcacatagaattttgtatttcttgttggataaagatgtaattgtactctacgtgaatagtagtat----taaagaaaaccaagtgct 222  Q
    |||||||||||||||||| |  ||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||    |||||||||| |  ||||    
T  25636036 tgttggataaagatcacacaagattttgtatttcttgttggataaagatgtaattttaccctacatgaatagtagtatatattaaagaaaactagatgct 25636135  T
Q  223 ccttaaactcacaccctcactctccatctttactaaagttacaacatatctttatttcccttcaacaaatgttagcaa 300  Q
    ||||||||||||||||||||| ||  |||||| |||||||||||||| |||||| |||||||||||||||||||||||    
T  25636136 ccttaaactcacaccctcactatctttctttattaaagttacaacatttctttacttcccttcaacaaatgttagcaa 25636213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 14626447 - 14626311
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    |||||||||||||||||  ||||| ||||||||||||||||| ||| | |||||| ||      ||||||||||||||||||||||||||||||||||||    
T  14626447 aaaattacacttttagtctcttaattttattttaggtaacaacttagtcctttatctttttttcatttcaattttgtccttttgatccatttacatatga 14626348  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||| |||||||||||||||||||||||||    
T  14626347 atttttaagttcaaaattcatgattttattttcttat 14626311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 127 - 300
Target Start/End: Original strand, 25616243 - 25616416
Alignment:
Q  127 tgttggataaagatcacatagaattttgtatttcttgttggataaagatgtaattgtactctacgtgaatagtagtattaaagaaaaccaagtgctcctt 226  Q
    |||||||||||||||||| |  |||||||||||||||||||||||||||||| |||||| ||  ||||| | ||||||||||| ||||||  ||||||||    
T  25616243 tgttggataaagatcacacaagattttgtatttcttgttggataaagatgtatttgtaccctgggtgaacaatagtattaaaggaaaccatatgctcctt 25616342  T
Q  227 aaactcacaccctcactctccatctttactaaagttacaacatatctttatttcccttcaacaaatgttagcaa 300  Q
    |||||||||||||  |||| |||||||||||| ||| |||| | |||||| || ||||| |||||| |||||||    
T  25616343 aaactcacaccctttctcttcatctttactaaggtttcaacttttctttacttaccttctacaaattttagcaa 25616416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 41944187 - 41944051
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||||||||||||||| | |||| | |||||| ||      |||||||||||||||||||||||||||| |||||||    
T  41944187 aaaattacacttttagtcccttaactttattttaggtaatagtttagtcctttatctttatttaatttcaattttgtccttttgatccattttcatatga 41944088  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  41944087 atttttaagcttaaaattaatgattttattttcttat 41944051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 110 - 300
Target Start/End: Original strand, 25620538 - 25620728
Alignment:
Q  110 ttctcacaaagtaagcatgttggataaagatcacatagaattttgtatttcttgttggataaagatgtaattgtactctacgtgaatagtagtattaaag 209  Q
    |||||||| |||| ||||||||||||||||||||| |   ||||||||||||| ||||| |||||||||||||||| || |||||||| |||||||||||    
T  25620538 ttctcacacagtatgcatgttggataaagatcacacaagcttttgtatttcttattggaaaaagatgtaattgtaccctgcgtgaatattagtattaaag 25620637  T
Q  210 aaaaccaagtgctccttaaactcacaccctcactctccatctttactaaagttacaacatatctttatttcccttcaacaaatgttagcaa 300  Q
    ||||| |  || ||||||||||| |||||   |||| |||||| ||||||||  |||| | ||||||  | ||| |||||||| |||||||    
T  25620638 aaaactatatggtccttaaactcccacccatgctcttcatcttaactaaagtatcaacttttctttacctacctacaacaaattttagcaa 25620728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 27812570 - 27812706
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||||||||||||| ||||||||||| | |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  27812570 aaaattacacttttagttccttaacttaattttaggtaatagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 27812669  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  27812670 atttttaagcttaaaattcatgattttattttcttat 27812706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 328 - 462
Target Start/End: Complemental strand, 35748007 - 35747867
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttat--att----atttcaattttgtccttttgatccatttacat 421  Q
    ||||||||||||||||||||||||||||||| |||| |||||||| |||  | ||||||  |||    |||||||||| ||| ||||  ||||||| |||    
T  35748007 aggtaaaattacacttttagttccttaacttaatttcaggtaacagtttggtcctttatctatttttcatttcaatttggtcatttttgtccattttcat 35747908  T
Q  422 atgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  35747907 atgaatttttaagcttaaaattcatgattttattttcttat 35747867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 20209153 - 20209289
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  20209153 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 20209252  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  20209253 atttttaagcttaaaattcatgattttattttcttat 20209289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 44664932 - 44664796
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| |||||| || |||||||||||||  ||| | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  44664932 aaaattacacttttagtcccttaatttaattttaggtaacagattagtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 44664833  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  44664832 atttttaagcttaaaattcatgattttattttcttat 44664796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 329 - 462
Target Start/End: Complemental strand, 44920212 - 44920073
Alignment:
Q  329 ggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacata 422  Q
    |||||||||||| ||||||| ||||||||| |||| ||| ||||||||  | |||||| ||      |||||||||| ||||||||  ||||||| ||||    
T  44920212 ggtaaaattacatttttagtcccttaacttaatttcaggcaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcata 44920113  T
Q  423 tgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  44920112 tgaattttgaagtttaaaattcatgattttattttcttat 44920073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 11220995 - 11221131
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| ||||||||||||| ||| || |||||| ||      |||||||||||||| ||||  | ||||| |||||      
T  11220995 aaaattacacttttagtcccttaacttaattttaggtaacagtttgatcctttatctttttttcatttcaattttgtcatttttgttcattttcatatac 11221094  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  11221095 atttttaagcttaaaattcatgattttattttcttat 11221131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 14202107 - 14201971
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| || ||||| ||| || |||||| ||      |||| ||||| ||||||||  ||||||| |||||||    
T  14202107 aaaattacacttttagtcccttaacttaatttcagataacagtttgatcctttatctttttttcattttaatttagtcctttttgtccattttcatatga 14202008  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  14202007 atttttaagcttaaaattcatgattttattttcttat 14201971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 328 - 462
Target Start/End: Complemental strand, 29434616 - 29434476
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacat 421  Q
    ||||||||||||||||||||| | ||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||| ||||  ||||||| |||    
T  29434616 aggtaaaattacacttttagtcctttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcatttttgtccattttcat 29434517  T
Q  422 atgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  29434516 atgaatttttaagcttaaaattcatgattttattttcttat 29434476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 45567411 - 45567547
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| ||||||||||||| |||| |  ||||| ||      |||||||||| ||||||||  ||||||| ||||| |    
T  45567411 aaaattacacttttagtcccttaacttaattttaggtaacagtttagtcttttatctttttttcatttcaatttggtcctttttgtccattttcatataa 45567510  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  45567511 atttttaagcttaaaattcatgatttcattttcttat 45567547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 2862704 - 2862840
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| ||||||||||||| |||  | |||||| ||      |||||||||| ||||||||  | ||||| |||||      
T  2862704 aaaattacacttttagtcccttaacttaattttaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgttcattttcatatac 2862803  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  2862804 atttttaagcttaaaattcatgattttattttcttat 2862840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 18677916 - 18678052
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| ||||||| |||||| || |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  18677916 aaaattacatttttagtcccttaatttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 18678015  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  18678016 atttttaagcttaaaattcatgattttattttcttat 18678052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 28844043 - 28843907
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| ||  ||||||||  | |||||| ||      |||||||||| ||| ||||  ||||||| |||||||    
T  28844043 aaaattacacttttagtcccttaacttaatttcagacaacaatttggtcctttatctttttttcatttcaatttggtcatttttgtccattttcatatga 28843944  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  28843943 atttttaagcttaaaattcatgattttattttcttat 28843907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 32809157 - 32809293
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    |||||||||||||| || |||||| || |||| ||||||||||||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  32809157 aaaattacacttttggtcccttaatttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 32809256  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  32809257 atttttaagcttaaaattcatgatttgattttcttat 32809293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 11440047 - 11439975
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||| ||||| ||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11440047 attttaatttggtcctttttgtccattttcatatgaatttttaagtttaaaattcatgattttattttcttat 11439975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 14463189 - 14463261
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||||||  ||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  14463189 atttcaatttggtcctttttgtccattttcatatgaatttttaagtttaaaattcattattttattttcttat 14463261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 25635928 - 25636004
Alignment:
Q  23 tggggagccaataataatcacaaaggataagcttaagcaggtaagatgctaatatactttcaattgttcagtttgca 99  Q
    ||||||||||| | |||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||| ||||    
T  25635928 tggggagccaagagtaatcacaaagggtaagcttaagcaggcaagatgttaatatactttcaattgttcagtatgca 25636004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 334 - 462
Target Start/End: Complemental strand, 15543308 - 15543174
Alignment:
Q  334 aattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatgaat 427  Q
    ||||||||||||||| ||||||||| |||| |||||||| ||| || |||||| ||      |||| |||||  || ||||  ||||||| |||||||||    
T  15543308 aattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatctttttttcattttaatttgatcatttttgtccattttcatatgaat 15543209  T
Q  428 ttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||| |||||||||||||||||||||||||||    
T  15543208 ttttaagcttaaaattcatgattttattttcttat 15543174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 49002240 - 49002374
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| | || |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  49002240 aaaattacacttttagtcccttaacttaacttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 49002339  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
      |||||||||||||||||||||||||||||||||||    
T  49002340 --ttttaagtttaaaattcatgattttattttcttat 49002374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 18169065 - 18168929
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| || ||||| |||  |  ||||| ||      |||||||||| |||||||| ||| ||||  ||||||    
T  18169065 aaaattacacttttagtcccttaacttaatttcagataacagtttggtcatttatctttttttcatttcaatttggtcctttttatctatttttatatga 18168966  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  18168965 atttttaagcttaaaattcatgattttattttcttat 18168929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 26845201 - 26845065
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatattatttcaatttt------gtccttttgatccatttacatatga 425  Q
    ||||||||| ||||||| ||| ||||| |||||||||||||||||  | ||||||||| |||| |||||      ||| ||||  ||||||| |||||      
T  26845201 aaaattacaattttagtccctcaacttaattttaggtaacaatttggtcctttatattttttccattttaatttggtcttttttgtccattttcatatac 26845102  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  26845101 atttttaagcttaaaattcatgattttattttcttat 26845065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 38674984 - 38675120
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||| | ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| ||||| |    
T  38674984 aaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatctttttttaatttcaatttggtcctttttgtccattttcatataa 38675083  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    | ||||||| |||||||||||||||||||||||||||    
T  38675084 aattttaagcttaaaattcatgattttattttcttat 38675120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 11989762 - 11989690
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||| ||||  ||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  11989762 atttcaatttggtcatttttgtccattttcatataaatttttaagtttaaaattcatgattttattttcttat 11989690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 21016988 - 21017060
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||| ||||| ||| ||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21016988 attttaatttggtcttttttgtccattttcatatgaatttttaagtttaaaattcatgattttattttcttat 21017060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 94 - 173
Target Start/End: Original strand, 25624835 - 25624915
Alignment:
Q  94 tttgcaaactgcctaatt-ctcacaaagtaagcatgttggataaagatcacatagaattttgtatttcttgttggataaag 173  Q
    |||||||||||| ||||| |||||| |||||||||||||||||||||||||| |  ||||||||||| |||||||||||||    
T  25624835 tttgcaaactgcttaatttctcacacagtaagcatgttggataaagatcacacaagattttgtattttttgttggataaag 25624915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 39778346 - 39778418
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||| ||||  ||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  39778346 atttcaatttggtcttttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttat 39778418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 402 - 462
Target Start/End: Complemental strand, 44036921 - 44036861
Alignment:
Q  402 tccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44036921 tcctttttgtccattttcatatgaatttttaagtttaaaattcatgattttattttcttat 44036861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 338 - 462
Target Start/End: Original strand, 45171587 - 45171717
Alignment:
Q  338 acacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatgaattttt 431  Q
    ||||||||||| ||||||||| ||||  |||||||||||  | |||||| ||      |||| |||||  |||||||  ||||||| |||||||||||||    
T  45171587 acacttttagtcccttaacttaatttcgggtaacaatttggtcctttatctttttttcattttaatttgttcctttttgtccattttcatatgaattttt 45171686  T
Q  432 aagtttaaaattcatgattttattttcttat 462  Q
    ||| |||||||||||||||||||||||||||    
T  45171687 aagcttaaaattcatgattttattttcttat 45171717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 45214379 - 45214516
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt-------atttcaattttgtccttttgatccatttacatatg 424  Q
    ||||||||||||||||| ||||||||| |||| || ||||| |||  | |||||| ||       |||||||||| ||||||||  ||||||| ||||||    
T  45214379 aaaattacacttttagtcccttaacttaatttcagttaacagtttggtcctttatcttttttttcatttcaatttggtcctttttgtccattttcatatg 45214478  T
Q  425 aatttttaagtttaaaattcatgattttattttcttat 462  Q
    || ||||||| ||||||||||| |||||||||||||||    
T  45214479 aaattttaagcttaaaattcataattttattttcttat 45214516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 388 - 462
Target Start/End: Original strand, 45539897 - 45539971
Alignment:
Q  388 ttatttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||| ||| ||||  |||||||  ||||||||||||||| |||||||||||||||||||||||||||    
T  45539897 ttatttcaatttggtcatttttgtccatttttatatgaatttttaagcttaaaattcatgattttattttcttat 45539971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 25061304 - 25061439
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    |||||||||||||| || ||||||||| |||| ||||||||||||  | |||||| ||      |||| ||||| ||||||||  ||||||| |||||||    
T  25061304 aaaattacacttttggtcccttaacttaatttcaggtaacaatttggtcctttatctttttttcattttaatttggtcctttttgtccattttcatatga 25061403  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| ||||||||||| ||||| |||||||||    
T  25061404 atttttaagcttaaaattcataatttt-ttttcttat 25061439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 44976756 - 44976892
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| ||||||| ||||||||| |||||| |||||| |||  |  ||||| ||      |||||||||| ||| |||| |||||||| |||||      
T  44976756 aaaattacagttttagtcccttaacttaattttatgtaacagtttggtcttttatctttttttcatttcaatttggtcatttttatccattttcatatac 44976855  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  44976856 atttttaagcttaaaattcatgattttattttcttat 44976892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 328 - 462
Target Start/End: Original strand, 53712250 - 53712390
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacat 421  Q
    ||||||||||||| ||||||| ||||||||| ||||||||||||| ||| || |||||| ||      |||| ||||| ||| ||||  ||||||| |||    
T  53712250 aggtaaaattacagttttagtcccttaacttaattttaggtaacagtttgatcctttatctttttttcattttaatttggtcatttttgtccatttgcat 53712349  T
Q  422 atgaatttttaagtttaaaattcatgattttattttcttat 462  Q
     |  ||||||||| ||||||||||| |||||||||||||||    
T  53712350 gtacatttttaagcttaaaattcattattttattttcttat 53712390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 246
Target Start/End: Original strand, 25625823 - 25625917
Alignment:
Q  155 tatttcttgttggataaagatgtaattgtactctacgtgaatagt---agtattaaagaaaaccaagtgctccttaaactcacaccctcactctc 246  Q
    ||||| ||||| |||||||||||||||||||  | ||||||||||   |||||||||||||||   ||||||||||||||||||||||| |||||    
T  25625823 tattttttgttagataaagatgtaattgtaccttgcgtgaatagtagtagtattaaagaaaacttggtgctccttaaactcacaccctctctctc 25625917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 406 - 462
Target Start/End: Original strand, 43378213 - 43378269
Alignment:
Q  406 tttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  43378213 tttggtccattttcatatgaatttttaagtttaaaattcatgattttatttttttat 43378269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 46292829 - 46292757
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||| ||||  ||||||| |||||||||||||||| || ||||||||||||||||||||||||    
T  46292829 atttcaatttggtcttttttgtccattttcatatgaatttttaagcttgaaattcatgattttattttcttat 46292757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 332 - 457
Target Start/End: Complemental strand, 50711306 - 50711171
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  50711306 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 50711207  T
Q  426 attttt----aagtttaaaattcatgattttatttt 457  Q
    ||||||    ||| ||||||||||||||||||||||    
T  50711206 atttttttttaagcttaaaattcatgattttatttt 50711171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 6954308 - 6954172
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| ||||||| |||||||||  |  ||||| ||      ||||||||||  |||||||  |||||||  ||||      
T  6954308 aaaattacacttttagtcccttaacttaattttagataacaatttggtcatttatctttttttcatttcaatttgatcctttttgtccatttttatatac 6954209  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  6954208 attttaaagcttaaaattcatgattttattttcttat 6954172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 390 - 460
Target Start/End: Complemental strand, 36546327 - 36546257
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttctt 460  Q
    |||||||||||||  ||||  ||||||| ||||||||| |||||| |||||||| ||||||||||||||||    
T  36546327 atttcaattttgtattttttgtccattttcatatgaatctttaagcttaaaatttatgattttattttctt 36546257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 390 - 460
Target Start/End: Original strand, 36561987 - 36562057
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttctt 460  Q
    |||||||||||||  ||||  ||||||| ||||||||| |||||| |||||||| ||||||||||||||||    
T  36561987 atttcaattttgtattttttgtccattttcatatgaatctttaagcttaaaatttatgattttattttctt 36562057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 423 - 462
Target Start/End: Original strand, 31574353 - 31574392
Alignment:
Q  423 tgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  31574353 tgaatttttaagcttaaaattcatgattttattttcttat 31574392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 25628103 - 25628161
Alignment:
Q  194 aatagtagtattaaagaaaaccaagtgctccttaaactcacaccctcactctccatctt 252  Q
    ||||||||||| ||||||||||   ||| |||||||||||||||||| |||||||||||    
T  25628103 aatagtagtataaaagaaaaccggatgccccttaaactcacaccctcgctctccatctt 25628161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 386
Target Start/End: Original strand, 29434300 - 29434358
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||| ||||||||| ||||||||| |||| |||||||||||| || ||||||    
T  29434300 aggtaaaattatacttttagtcccttaacttaatttcaggtaacaatttgatcctttat 29434358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 44664624 - 44664678
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||||| | ||||||    
T  44664624 aaaattacacttttagtcccttaacttaatttcaggtaacaatttagtcctttat 44664678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 11221307 - 11221259
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    ||||||||||||||||||| | ||||||||| |||| ||||||||||||    
T  11221307 aggtaaaattacacttttaatcccttaacttaatttcaggtaacaattt 11221259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 11989518 - 11989562
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    ||||||||||||||||| ||||||||| ||||||||||| |||||    
T  11989518 aaaattacacttttagtcccttaacttaattttaggtaataattt 11989562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 15020520 - 15020448
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||| ||||| ||| ||||  ||||||| ||| | |||||||||| ||||||||||||||||||| |||||||    
T  15020520 attttaatttggtcttttttgtccattttcatttcaatttttaagcttaaaattcatgattttatattcttat 15020448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 462
Target Start/End: Complemental strand, 18461831 - 18461795
Alignment:
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  18461831 atttttaagcttaaaattcatgattttattttcttat 18461795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 21017236 - 21017196
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||||||||||||| |||| ||||||||    
T  21017236 aaaattacacttttagttccttaacttaatttcaggtaaca 21017196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 31574564 - 31574520
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||||    
T  31574564 aaaattacacttttagtcccttaacttaatttcaggtaacaattt 31574520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 39778590 - 39778550
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  39778590 aaaattacacttttagtcccttaacttaattttaggtaaca 39778550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 46292585 - 46292625
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||||||||||||| |||| ||||||||    
T  46292585 aaaattacacttttagttccttaacttaatttcaggtaaca 46292625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 253
Target Start/End: Original strand, 25616558 - 25616593
Alignment:
Q  218 gtgctccttaaactcacaccctcactctccatcttt 253  Q
    ||||||||||||||||||||||| ||||||||||||    
T  25616558 gtgctccttaaactcacaccctcgctctccatcttt 25616593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 36229763 - 36229806
Alignment:
Q  329 ggtaaaattacacttttagttccttaactttattttaggtaaca 372  Q
    |||||||||||||  ||||| |||||||||||||||||||||||    
T  36229763 ggtaaaattacacaattagtcccttaactttattttaggtaaca 36229806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 430
Target Start/End: Original strand, 2397853 - 2397893
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttt 430  Q
    |||||| ||||||||||||||||||||| |||||| |||||    
T  2397853 atttcagttttgtccttttgatccattttcatatggatttt 2397893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 430
Target Start/End: Original strand, 2579162 - 2579202
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttt 430  Q
    |||||||||||||||||||| || |||| ||||||||||||    
T  2579162 atttcaattttgtccttttggtctatttgcatatgaatttt 2579202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 3612594 - 3612638
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||  ||||| ||||||||| |||||||||||||    
T  3612594 aggtaaaattacacaattagtcccttaacttaattttaggtaaca 3612638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 8851807 - 8851847
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  8851807 aaaattacacaattagtcccttaactttattttaggtaaca 8851847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 11121625 - 11121585
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  11121625 aaaattacacaattagtcccttaactttattttaggtaaca 11121585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 14463434 - 14463394
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  14463434 aaaattacacttttagtcccttaacttaatttcaggtaaca 14463394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 15542998 - 15543042
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||||| ||||||||||| |||| | ||||||    
T  15542998 aggtaaaattacacttttaattccttaacttaatttcatgtaaca 15543042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 18461619 - 18461663
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    ||||||| ||||||||| ||||| ||| |||||||||||||||||    
T  18461619 aaaattatacttttagtcccttaccttaattttaggtaacaattt 18461663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 22316723 - 22316763
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  22316723 aaaattacacaattagtcccttaactttattttaggtaaca 22316763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 22317062 - 22317022
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  22317062 aaaattacacgattagtcccttaactttattttaggtaaca 22317022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 22975348 - 22975388
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  22975348 aaaattacacaattagtcccttaactttattttaggtaaca 22975388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 22975687 - 22975647
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  22975687 aaaattacacaattagtcccttaactttattttaggtaaca 22975647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 28829756 - 28829796
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||||| |||||||||||||||||||||    
T  28829756 aaaattacacaattagttctttaactttattttaggtaaca 28829796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 372
Target Start/End: Original strand, 33491617 - 33491645
Alignment:
Q  344 ttagttccttaactttattttaggtaaca 372  Q
    |||||||||||||||||||||||||||||    
T  33491617 ttagttccttaactttattttaggtaaca 33491645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 37513433 - 37513393
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  37513433 aaaattacacaattagtcccttaactttattttaggtaaca 37513393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 48434145 - 48434105
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  48434145 aaaattacacaattagtcccttaactttattttaggtaaca 48434105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 49621321 - 49621281
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  49621321 aaaattacacaattagtcccttaactttattttaggtaaca 49621281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 49711404 - 49711444
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  49711404 aaaattacacaattagtcccttaactttattttaggtaaca 49711444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 442
Target Start/End: Original strand, 50176606 - 50176658
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaat 442  Q
    |||| |||||| || |||||||||||||| ||||||||||| |||||| ||||    
T  50176606 attttaattttatctttttgatccatttagatatgaattttcaagttttaaat 50176658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 50710895 - 50710935
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  50710895 aaaattacacttttagtcccttaacttaatttcaggtaaca 50710935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 50711167 - 50711127
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  50711167 aaaattacacttttagtcccttaacttaatttcaggtaaca 50711127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 3e-43; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 7172934 - 7173070
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    |||||||||||||| || |||||||||||||||||||||||||||| | |||||| ||      ||||||||||||||||||||||||||||||||||||    
T  7172934 aaaattacacttttggtcccttaactttattttaggtaacaatttagtcctttatctttttttcatttcaattttgtccttttgatccatttacatatga 7173033  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  7173034 atttttaagcttaaaattcatgattttattttcttat 7173070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 328 - 462
Target Start/End: Complemental strand, 8806059 - 8805919
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacat 421  Q
    ||||||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||    
T  8806059 aggtaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcat 8805960  T
Q  422 atgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  8805959 atgaatttttaagtttaaaattcatgattttattttcttat 8805919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 45055633 - 45055497
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  45055633 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 45055534  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||||||||||||||||||||||||    
T  45055533 atttttaagtttaaaattcatgattttattttcttat 45055497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 12423848 - 12423984
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  12423848 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 12423947  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  12423948 atttttaagcttaaaattcatgattttattttcttat 12423984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 11337895 - 11338031
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| | ||||||| |||| | ||||||||||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  11337895 aaaattacacttttagtcctttaacttaatttcatgtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 11337994  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  11337995 atttttaagcttaaaattcatgattttattttcttat 11338031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 19124834 - 19124970
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||| | ||||||||| | ||||||||||||||| || |||||| ||      |||||||||| |||||||| |||||||| |||||      
T  19124834 aaaattacacttttaatcccttaacttaagtttaggtaacaatttgatcctttatctttttttcatttcaatttggtcctttttatccattttcatatac 19124933  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  19124934 atttttaagcttaaaattcatgattttatttacttat 19124970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 336 - 462
Target Start/End: Original strand, 38494921 - 38495053
Alignment:
Q  336 ttacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatgaattt 429  Q
    ||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||||||    
T  38494921 ttacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatgaattt 38495020  T
Q  430 ttaagtttaaaattcatgattttattttcttat 462  Q
    ||||| |||||||||||||||||||||||||||    
T  38495021 ttaagcttaaaattcatgattttattttcttat 38495053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 41922593 - 41922457
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    |||||||||||||||||  |||||||| |||| | ||||||||||  || ||||| ||      |||||||||| ||| ||||  ||||||| |||||||    
T  41922593 aaaattacacttttagtgtcttaacttaatttcatgtaacaatttggttgtttatctttttttcatttcaatttggtcatttttgtccattttcatatga 41922494  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||||||||||||||||||||||||    
T  41922493 atttttaagtttaaaattcatgattttattttcttat 41922457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 44458095 - 44457959
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| ||||| |    
T  44458095 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatta 44457996  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  44457995 atttttaagcttaaaattcatgattttattttcttat 44457959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 16861180 - 16861045
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatattatttca-----attttgtccttttgatccatttacatatgaa 426  Q
    ||||||||| ||||||| | ||||||| ||||||| ||||  ||| || |||||| || |||||     |||| ||||||||||||||||||| ||||||    
T  16861180 aaaattacatttttagtccattaacttaattttagataactgtttgatcctttattttttttcattacaatttcgtccttttgatccatttacgtatgaa 16861081  T
Q  427 tttttaagtttaaaattcatgattttattttcttat 462  Q
    |||| ||| |||||||||||||||||||||||||||    
T  16861080 ttttgaagcttaaaattcatgattttattttcttat 16861045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 20121209 - 20121344
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt-----atttcaattttgtccttttgatccatttacatatgaa 426  Q
    ||||||||||||||||| ||||||||| ||||  ||||||| |||  | |||||| ||     |||||||| | ||||||||  ||||||| ||||||||    
T  20121209 aaaattacacttttagtcccttaacttaatttcgggtaacagtttggtcctttatcttttttcatttcaatctggtcctttttgtccattttcatatgaa 20121308  T
Q  427 tttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||| |||||||||||||||||||||||||||    
T  20121309 tttttaagcttaaaattcatgattttattttcttat 20121344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 41857451 - 41857316
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt-----atttcaattttgtccttttgatccatttacatatgaa 426  Q
    ||||||||||||||||| ||||||||| ||||  ||||||| |||  | |||||| ||     |||||||| | ||||||||  ||||||| ||||||||    
T  41857451 aaaattacacttttagtcccttaacttaatttcgggtaacagtttggtcctttatcttttttcatttcaatctggtcctttttgtccattttcatatgaa 41857352  T
Q  427 tttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||| |||||||||||||||||||||||||||    
T  41857351 tttttaagcttaaaattcatgattttattttcttat 41857316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 19104277 - 19104412
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaat------tctttatattatttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||| | ||||||| ||||||||| |||||| |||||| ||||||      ||||| | |||||||||||| ||| ||||  ||||||| |||||||    
T  19104277 aaaattatatttttagtcccttaacttaattttaagtaacagtttaatcatttttcttttt-ttatttcaatttggtcatttttgtccattttcatatga 19104375  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  19104376 atttttaagcttaaaattcatgattttattttcttat 19104412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 34287519 - 34287655
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||| |  |||||||| ||||||||||||| |||  | |||||| ||      |||||||||| ||| ||||  ||||||| |||||||    
T  34287519 aaaattacacttttactctcttaacttaattttaggtaacagtttggtcctttatctttttttcatttcaatttggtcatttttgtccattttcatatga 34287618  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  34287619 atttttaagcttaaaattcatgattttattttcttat 34287655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 45867448 - 45867584
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| | |||||| |||  | |||||| ||      |||| ||||| ||||||||  ||||||| |||||||    
T  45867448 aaaattacacttttagtcccttaacttaatttcaagtaacagtttggtcctttatctttttttcattttaatttggtcctttttgtccattttcatatga 45867547  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  45867548 atttttaagcttaaaattcatgattttattttcttat 45867584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 46426664 - 46426800
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||| | | ||||||| |||||||||||||||||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  46426664 aaaattacacttttaatcctttaacttaattttaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 46426763  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||| ||||||| ||||||||||||||    
T  46426764 atttttaagcttaatattcatggttttattttcttat 46426800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 47221710 - 47221846
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| ||||||| ||||||||| |||| |||||||| |||  |  ||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  47221710 aaaattacatttttagtcccttaacttaatttcaggtaacagtttggtcatttatctttttttcatttcaatttggtcctttttgtccattttcatatga 47221809  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  47221810 atttttaagcttaaaattcatgattttattttcttat 47221846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 2699684 - 2699756
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||||||  ||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  2699684 atttcaatttggtcctttttgtccattttcatatgaatttttaagtttaaaatttatgattttattttcttat 2699756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 32165468 - 32165396
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||| |||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  32165468 atttcaatttggtcttttttatccattttcatatgaatttttaagcttaaaattcatgattttattttcttat 32165396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 8522327 - 8522463
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt-------atttcaattttgtccttttgatccatttacatatg 424  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||       |||||||||| ||||||||  ||||||| ||| ||    
T  8522327 aaaattacacttttagtcccttaacttaatttcaggtaacattttggtcctttatcttttttttcatttcaatttggtcctttttgtccattt-catttg 8522425  T
Q  425 aatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| |||||||||||||||||||||||||||    
T  8522426 aatttttaagcttaaaattcatgattttattttcttat 8522463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 24331691 - 24331554
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt-------atttcaattttgtccttttgatccatttacatatg 424  Q
    ||||||||||||||||| ||||||||| |||| || ||| |||||  | |||||| ||       |||||||||| ||||||||  ||||||| ||||||    
T  24331691 aaaattacacttttagtcccttaacttaatttcagataataatttggtcctttatcttttttttcatttcaatttggtcctttttgtccattttcatatg 24331592  T
Q  425 aatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  24331591 aatttttaagcttaaaattcatgattttatttttttat 24331554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 49023580 - 49023717
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt-------atttcaattttgtccttttgatccatttacatatg 424  Q
    ||||||||| ||||||| ||||||||| |||| |||||||| |||  | |||||| ||       |||||||||| ||||||||  ||||||| ||||||    
T  49023580 aaaattacatttttagtcccttaacttaatttcaggtaacagtttggtcctttatcttttttttcatttcaatttggtcctttttgtccattttcatatg 49023679  T
Q  425 aatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  49023680 aatttttaagtttaaaatttatgattttcttttcttat 49023717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 388 - 462
Target Start/End: Complemental strand, 17173338 - 17173264
Alignment:
Q  388 ttatttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||| ||||| ||||||||  ||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  17173338 ttattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttat 17173264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 21455865 - 21455729
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    |||||||||||||||||||||||| || |||||||||||||||||  | |||||| ||      |||||||||| || |||||  | ||||| |||||      
T  21455865 aaaattacacttttagttccttaatttaattttaggtaacaatttggtcctttatctttttttcatttcaatttggttctttttgttcattttcatatac 21455766  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  21455765 atttttaagcttaaaaatcatgattttattttcttat 21455729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 21733379 - 21733243
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| || ||||  |||||||| |||| ||||||||||||  | |||||| ||      |||||||||| ||| ||||  ||||||| |||||||    
T  21733379 aaaattacatttatagtctcttaacttaatttcaggtaacaatttcgtcctttatctttttttcatttcaatttggtcatttttgtccattttcatatga 21733280  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    | |||||||||||||||||||||||||||||||||||    
T  21733279 aattttaagtttaaaattcatgattttattttcttat 21733243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 23036650 - 23036786
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| ||||||| ||||||||| ||||||||||||| |||| |  ||||| ||      |||||||||| ||||||||  || |||| |||||      
T  23036650 aaaattacaattttagtcccttaacttaattttaggtaacagtttagtcttttatctttttttcatttcaatttggtcctttttgtctattttcatatac 23036749  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  23036750 atttttaagcttaaaattcatgattttattttcttat 23036786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 31813733 - 31813869
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||| | ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||| ||||  ||||||| |||||||    
T  31813733 aaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatctttttctcatttcaatttggtcttttttgtccattttcatatga 31813832  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  31813833 atttttaagcttaaaatttatgattttattttcttat 31813869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 42391607 - 42391471
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||  | || ||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  42391607 aaaattacacttttagtcccttaacttgatttcaggtaacagtttggtcctctatctttttttcatttcaatttggtcctttttgtccattttcatatga 42391508  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    | ||||||  |||||||||||||||||||||||||||    
T  42391507 aattttaaacttaaaattcatgattttattttcttat 42391471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 7149538 - 7149466
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||| ||||  ||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  7149538 atttcaatttggtcttttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttat 7149466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 388 - 462
Target Start/End: Complemental strand, 8949541 - 8949467
Alignment:
Q  388 ttatttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||| ||||| ||||||||  ||||||| |||||||| ||||||| |||||||||||||||||||||||||||    
T  8949541 ttattttaatttggtcctttttgtccattttcatatgaagttttaagcttaaaattcatgattttattttcttat 8949467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 462
Target Start/End: Original strand, 21626938 - 21627072
Alignment:
Q  333 aaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt-----atttcaattttgtccttttgatccatttacatatgaat 427  Q
    |||||| |||||||||   ||||||| ||||||||||||| |||  |||||||| ||     |||| ||||| ||||||||  ||||||| |||||  ||    
T  21626938 aaattatacttttagtcttttaacttaattttaggtaacagtttggttctttatcttttttcattttaatttggtcctttttgtccattttcatatacat 21627037  T
Q  428 ttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||| |||||||||||||||||||||||||||    
T  21627038 ttttaagcttaaaattcatgattttattttcttat 21627072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 392 - 462
Target Start/End: Original strand, 43575131 - 43575201
Alignment:
Q  392 ttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||| ||||||||  ||||||| |||||||| ||||||| |||||||||||||||||||||||||||    
T  43575131 ttcaatttggtcctttttgtccattttcatatgaaattttaagcttaaaattcatgattttattttcttat 43575201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 401 - 462
Target Start/End: Original strand, 11682000 - 11682061
Alignment:
Q  401 gtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||  ||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  11682000 gtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttat 11682061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 45062129 - 45062201
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| | ||||||  ||||||| ||||| |||||||||| |||||||||||||||||||||||||||    
T  45062129 atttcaatttggccctttttgtccattttcatataaatttttaagcttaaaattcatgattttattttcttat 45062201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 462
Target Start/End: Original strand, 46738268 - 46738403
Alignment:
Q  333 aaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatgaa 426  Q
    |||||||| ||||||| | ||||||| |||| |||||||| |||  |||||||| ||      |||||||||| |||  |||  ||||||| ||||||||    
T  46738268 aaattacatttttagtcctttaacttaatttcaggtaacagtttggttctttatctttttttcatttcaatttggtctattttgtccattttcatatgaa 46738367  T
Q  427 tttttaagtttaaaattcatgattttattttcttat 462  Q
    |||| ||| |||||||||||||||||||||||||||    
T  46738368 ttttaaagcttaaaattcatgattttattttcttat 46738403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 343 - 462
Target Start/End: Complemental strand, 10543711 - 10543586
Alignment:
Q  343 tttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatgaatttttaagtt 436  Q
    |||||| ||||||||||||||||||||||| ||| || |||||| ||      |||||||||||||||||||| |||||||  ||||| ||||| ||| |    
T  10543711 tttagtcccttaactttattttaggtaacagtttgatcctttatctttttctcatttcaattttgtccttttggtccatttttatatggattttcaagct 10543612  T
Q  437 taaaattcatgattttattttcttat 462  Q
    | ||||| ||| ||||| ||||||||    
T  10543611 tcaaatttatggttttaatttcttat 10543586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 413 - 462
Target Start/End: Original strand, 31115888 - 31115937
Alignment:
Q  413 catttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  31115888 cattttcatatgaattttgaagtttaaaattcatgattttattttcttat 31115937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 31283464 - 31283329
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||||| |||||| |||  | |||||| ||      ||||||||||  || ||||  || |||| |||||||    
T  31283464 aaaattacacttttagtcccttaacttaattttatgtaacagtttggtcctttatctttttttcatttcaatttgatcatttttgtctattttcatatga 31283365  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||| ||| |||||||||||||||||||||||||||    
T  31283364 atttt-aagcttaaaattcatgattttattttcttat 31283329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 457
Target Start/End: Original strand, 49114342 - 49114411
Alignment:
Q  388 ttatttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttatttt 457  Q
    |||||||||||| ||| ||||  |||||||  ||||||||||||||| ||||||||||||||||||||||    
T  49114342 ttatttcaatttggtcttttttgtccatttttatatgaatttttaagcttaaaattcatgattttatttt 49114411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 457
Target Start/End: Complemental strand, 32064680 - 32064569
Alignment:
Q  352 ttaactttattttaggtaacaatttaat------tctttatattatttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattca 445  Q
    ||||||||||||||||||| ||||| ||      ||||| | |||||||| ||||||||||||| ||||||| |||| ||||||| ||| || |||||||    
T  32064680 ttaactttattttaggtaataatttgatcgtttatctttcttttatttcagttttgtccttttggtccatttgcataagaattttcaagctttaaattca 32064581  T
Q  446 tgattttatttt 457  Q
    || |||||||||    
T  32064580 tggttttatttt 32064569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 8522627 - 8522579
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    ||||||||||||||||||||| ||||||||| |||| ||||||||||||    
T  8522627 aggtaaaattacacttttagtcccttaacttaatttcaggtaacaattt 8522579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 386
Target Start/End: Original strand, 2933285 - 2933343
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||| ||| || ||||||    
T  2933285 aggtaaaattacacaattagtcccttaactttattttaggtaacactttcatcctttat 2933343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 394 - 462
Target Start/End: Original strand, 48765928 - 48765997
Alignment:
Q  394 caattttgtccttttgatccatttacatatgaatttttaagt-ttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||||| ||||| |||||| ||||| || | || ||||||||| ||||||||||||||    
T  48765928 caattttgtccttttgattcatttgcatatggattttcaaatcttcaaattcatggttttattttcttat 48765997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 11338207 - 11338159
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    ||||||||||||| ||||||| ||||||||| |||| ||||||||||||    
T  11338207 aggtaaaattacatttttagtcccttaacttaatttcaggtaacaattt 11338159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 31115840 - 31115884
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||||    
T  31115840 aaaattacacttttagtcccttaacttaatttcaggtaacaattt 31115884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 32178201 - 32178157
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||    
T  32178201 aggtaaaattacacaattagtcccttaactttattttaggtaaca 32178157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 45055325 - 45055369
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||||    
T  45055325 aaaattacacttttagtcccttaacttaatttcaggtaacaattt 45055369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 47222006 - 47221966
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||||||||||||| |||| ||||||||    
T  47222006 aaaattacacttttagttccttaacttaatttcaggtaaca 47221966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 372
Target Start/End: Original strand, 7149291 - 7149334
Alignment:
Q  329 ggtaaaattacacttttagttccttaactttattttaggtaaca 372  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||    
T  7149291 ggtaaaattacacttttagtcccttaacttaatttcaggtaaca 7149334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 386
Target Start/End: Complemental strand, 29099494 - 29099431
Alignment:
Q  323 tattcaggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    |||| ||| ||||||||||||||||| ||||||||| |||| |||||||| ||| || ||||||    
T  29099494 tatttaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttat 29099431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 379
Target Start/End: Complemental strand, 31814029 - 31813982
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaat 379  Q
    ||||||||||||||||| ||||||||| |||| || ||||||||||||    
T  31814029 aaaattacacttttagtcccttaacttaatttcagataacaatttaat 31813982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 462
Target Start/End: Original strand, 41749581 - 41749719
Alignment:
Q  330 gtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatat 423  Q
    ||||||||| | ||||| | |||||| || ||||||||||| ||||| || |||||| ||      |||| ||||| ||||||||  | |||||  ||||    
T  41749581 gtaaaattatatttttaatcccttaatttaattttaggtaataatttgatcctttatctttttttcattttaatttggtcctttttgttcatttttatat 41749680  T
Q  424 gaatttttaagtttaaaattcatgattttattttcttat 462  Q
      ||||||||  |||||||||||||||||||||||||||    
T  41749681 acatttttaatcttaaaattcatgattttattttcttat 41749719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 7173246 - 7173188
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||||||||||| | ||||||||| |||| |||||||| ||| || ||||||    
T  7173246 aggtaaaattacacttttaatcccttaacttaatttcaggtaacagtttgatcctttat 7173188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 372
Target Start/End: Complemental strand, 12424158 - 12424117
Alignment:
Q  331 taaaattacacttttagttccttaactttattttaggtaaca 372  Q
    |||||||||||||||||| ||||||||| |||| ||||||||    
T  12424158 taaaattacacttttagtcccttaacttaatttcaggtaaca 12424117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 372
Target Start/End: Complemental strand, 2933599 - 2933571
Alignment:
Q  344 ttagttccttaactttattttaggtaaca 372  Q
    |||||||||||||||||||||||||||||    
T  2933599 ttagttccttaactttattttaggtaaca 2933571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 7417854 - 7417814
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  7417854 aaaattacacaattagtcccttaactttattttaggtaaca 7417814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 8805743 - 8805787
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||| ||||||| ||||||||| |||| ||||||||    
T  8805743 aggtaaaattacatttttagtcccttaacttaatttcaggtaaca 8805787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Complemental strand, 17173396 - 17173364
Alignment:
Q  340 acttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||||| |||||||||||||    
T  17173396 acttttagttccttaacttaattttaggtaaca 17173364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 19305743 - 19305783
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  19305743 aaaattacacaattagtcccttaactttattttaggtaaca 19305783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 28408583 - 28408543
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  28408583 aaaattacacaattagtcccttaactttattttaggtaaca 28408543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 430
Target Start/End: Original strand, 32072047 - 32072087
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttt 430  Q
    ||||||||||||||||||||||| |||| ||||| ||||||    
T  32072047 atttcaattttgtccttttgatctattttcatataaatttt 32072087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 32523545 - 32523505
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  32523545 aaaattacacaattagtcccttaactttattttaggtaaca 32523505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 32832580 - 32832536
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||  ||||| |||||| ||||||||||||||||    
T  32832580 aggtaaaattacacaattagtcccttaattttattttaggtaaca 32832536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 38495225 - 38495185
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  38495225 aaaattacacttttagtcccttaacttaatttcaggtaaca 38495185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 41922285 - 41922325
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  41922285 aaaattacacttttagtcccttaacttaatttcaggtaaca 41922325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 42391299 - 42391339
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  42391299 aaaattacacttttagtcccttaacttaatttcaggtaaca 42391339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 43575361 - 43575321
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  43575361 aaaattacacttttagtcccttaacttaatttcaggtaaca 43575321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 43699925 - 43699965
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| ||||||| |||||    
T  43699925 aaaattacacttttagtcccttaacttaattttagataaca 43699965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 45062373 - 45062333
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  45062373 aaaattacacttttagtcccttaacttaatttcaggtaaca 45062333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 49114205 - 49114165
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  49114205 aaaattacacaattagtcccttaactttattttaggtaaca 49114165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 3e-43; HSPs: 84)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 32488587 - 32488723
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| | |||||| ||      ||||||||||||||||||||||||||||||||||||    
T  32488587 aaaattacacttttagtcccttaactttattttaggtaacaatttagtcctttatctttttttcatttcaattttgtccttttgatccatttacatatga 32488686  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  32488687 atttttaagcttaaaatttatgattttattttcttat 32488723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 20983917 - 20984053
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    |||||||||||||| || ||||||||||||||||||||| |||||| | |||||| ||      ||||||||||||||||||||||||||||||||||||    
T  20983917 aaaattacacttttggtcccttaactttattttaggtaataatttagtcctttatctttttttcatttcaattttgtccttttgatccatttacatatga 20984016  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  20984017 atttttaagcttaaaattcatgattttattttcttat 20984053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 23572604 - 23572740
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| ||||||| ||||||||||||||||||| ||| || | | |||||| ||      ||||||||||||||||||||||||||||||||||||    
T  23572604 aaaattacatttttagtcccttaactttattttaggttacagttgagtcctttatctttttttcatttcaattttgtccttttgatccatttacatatga 23572703  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| | |||||||||||||||||||||||||    
T  23572704 atttttaagctgaaaattcatgattttattttcttat 23572740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 25331818 - 25331956
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt--------atttcaattttgtccttttgatccatttacatat 423  Q
    ||||||||||||||||| ||||||||| |||| |||||||||||| || |||||| ||        |||||||||| ||||||||  ||||||| |||||    
T  25331818 aaaattacacttttagtcccttaacttaatttcaggtaacaatttgatcctttatttttttttttcatttcaatttggtcctttttgtccattttcatat 25331917  T
Q  424 gaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  25331918 gaatttttaagtttaaaatttatgattttattttcttat 25331956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 44551226 - 44551090
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  44551226 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttagtcctttttgtccattttcatatga 44551127  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||||||||||||||||||||||||    
T  44551126 atttttaagtttaaaattcatgattttattttcttat 44551090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 332 - 458
Target Start/End: Original strand, 31857585 - 31857716
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| ||||||| |||||| ||||||||| |||||| |||| |  ||||| ||      ||||||||||||| ||||||||||||||||||||||    
T  31857585 aaaattacatttttagt-ccttaattttattttaagtaacagtttattcttttatctttttttcatttcaattttgttcttttgatccatttacatatga 31857683  T
Q  426 atttttaagtttaaaattcatgattttattttc 458  Q
    ||||||||| |||||||||||||||||||||||    
T  31857684 atttttaagattaaaattcatgattttattttc 31857716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 325 - 462
Target Start/End: Original strand, 9902649 - 9902792
Alignment:
Q  325 ttcaggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccattta 418  Q
    |||||| ||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  || ||||     
T  9902649 ttcaggcaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtcaatttt 9902748  T
Q  419 catatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  9902749 catatgaatttttaagtttaaaatttatgattttattttcttat 9902792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 332 - 459
Target Start/End: Original strand, 39791920 - 39792053
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| | ||||||| |||| ||||||||||||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  39791920 aaaattacacttttagtcctttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 39792019  T
Q  426 atttttaagtttaaaattcatgattttattttct 459  Q
    ||||||||| ||||||||||||||||||||||||    
T  39792020 atttttaagcttaaaattcatgattttattttct 39792053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 44834982 - 44835112
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatattatttcaattttgtccttttgatccatttacatatgaattttt 431  Q
    ||||||||||||||| | ||||||||| |||| |||||||| |||  |||||||| |||||| |||||  |||||||  ||||||| |||||||| ||||    
T  44834982 aaaattacacttttaatcccttaacttaatttcaggtaacagtttggttctttattttattttaatttgatcctttttgtccattttcatatgaactttt 44835081  T
Q  432 aagtttaaaattcatgattttattttcttat 462  Q
    ||| |||||||| ||||||||| ||||||||    
T  44835082 aagcttaaaattaatgattttactttcttat 44835112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 52653934 - 52654071
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt-------atttcaattttgtccttttgatccatttacatatg 424  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||       |||||||||| ||||||||  |||||||  |||||    
T  52653934 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatcttttttttcatttcaatttggtcctttttgtccatttttatatg 52654033  T
Q  425 aatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| |||||||||||||||||||||||||||    
T  52654034 aatttttaagcttaaaattcatgattttattttcttat 52654071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 5747878 - 5748014
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| ||||||| |||||| || |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  5747878 aaaattacatttttagtcccttaatttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 5747977  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  5747978 atttttaagcttaaaattcatgattttattttcttat 5748014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 15516616 - 15516480
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    |||||||||||||| || ||||||||| |||| ||||||||||||| | |||||| ||      |||| ||||| ||||||||  || |||| |||||||    
T  15516616 aaaattacactttttgtcccttaacttaatttcaggtaacaatttagtcctttattttttattcatttgaatttggtcctttttgtcgattttcatatga 15516517  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  15516516 atttttaagcttaaaattcatgatcttattttcttat 15516480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 328 - 462
Target Start/End: Complemental strand, 26843114 - 26842975
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacat 421  Q
    ||||||||||||||||||||| | ||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||    
T  26843114 aggtaaaattacacttttagtcctttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcat 26843015  T
Q  422 atgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  26843014 atgaatttttaag-ctaaaattcatgattttattttcttat 26842975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 32922378 - 32922242
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  32922378 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 32922279  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    | ||||||  |||||||||||||||||||||||||||    
T  32922278 aattttaaacttaaaattcatgattttattttcttat 32922242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 35131107 - 35130971
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||| | ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  35131107 aaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 35131008  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    | ||||||||||||||||||| |||||||||||||||    
T  35131007 acttttaagtttaaaattcataattttattttcttat 35130971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 54036867 - 54037003
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||| | |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  54036867 aaaattacacttttagtcccttaacttaatttcaggtaatagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 54036966  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| || ||||||||||||||||||||||||    
T  54036967 atttttaagcttcaaattcatgattttattttcttat 54037003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 54997166 - 54997032
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt----atttcaattttgtccttttgatccatttacatatgaat 427  Q
    ||||||||| |||||||  |||||||| |||||| |||||||||| |  |||||  ||    |||||||||||||||||||| |||||||||||||||||    
T  54997166 aaaattacaattttagtcacttaacttaattttaagtaacaatttgaccctttacttttttcatttcaattttgtccttttggtccatttacatatgaat 54997067  T
Q  428 ttttaagtttaaaattcatgattttattttcttat 462  Q
    ||| ||| || ||||| ||| ||||||||||||||    
T  54997066 tttcaagcttcaaatttatggttttattttcttat 54997032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 10993871 - 10993800
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  10993871 atttcaatttggtccttttg-tccattttcatatgaatttttaagcttaaaattcatgattttattttcttat 10993800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 26948231 - 26948159
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||  ||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26948231 atttcaattgggtcctttttgtccattttcatatgaatttttaagtttaaaattcatgattttattttcttat 26948159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 323 - 462
Target Start/End: Original strand, 45801213 - 45801357
Alignment:
Q  323 tattcaggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatattatttca-----attttgtccttttgatccattt 417  Q
    |||||||| ||||||| |||||||||  ||||| || |||| |||||||| |||  | |||||| || |||||     |||| ||| ||||  |||||||    
T  45801213 tattcaggcaaaattatacttttagtctcttaatttaatttcaggtaacagtttggtcctttatcttttttcattttaatttggtcttttttgtccattt 45801312  T
Q  418 acatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
     ||||||||||||||||||||||||||||||||||||||||||||    
T  45801313 tcatatgaatttttaagtttaaaattcatgattttattttcttat 45801357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 329 - 462
Target Start/End: Original strand, 52537879 - 52538018
Alignment:
Q  329 ggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacata 422  Q
    |||||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||| ||||| ||||||||  ||||||| ||||    
T  52537879 ggtaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcattttaatttggtcctttttgtccattttcata 52537978  T
Q  423 tgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||| ||||||  |||||||||||||||||||||||||||    
T  52537979 tgaaattttaaacttaaaattcatgattttattttcttat 52538018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 16530629 - 16530493
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||| ||||||||| ||||||||| |||| | |||||| |||| || |||||  |      |||||||||| ||||||||  ||||||| |||||||    
T  16530629 aaaattatacttttagtcccttaacttaatttcaagtaacagtttagttttttattcttttttcatttcaatttggtcctttttgtccattttcatatga 16530530  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  16530529 atttttaagcttaaaatttatgattttattttcttat 16530493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 45655696 - 45655832
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaat------tctttatattatttcaattttgtccttttgatccatttacatatga 425  Q
    |||||||||||||||||  |||||||| |||| ||||||||||||  |      ||||| ||| ||||||||||  || |||| ||||||||  ||||||    
T  45655696 aaaattacacttttagtctcttaacttaatttcaggtaacaattttgtcttttatctttttatcatttcaatttgatcatttttatccatttttatatga 45655795  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  45655796 atttttaagcttaaaatttatgattttattttcttat 45655832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 46648072 - 46648208
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    |||||||||| ||||   ||||||||| |||| ||||||||||||  | |||||| ||      ||||||||||  |||||||  || |||| |||||||    
T  46648072 aaaattacacctttaaccccttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttgatcctttttgtctattttcatatga 46648171  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||||||||||||||||||||||||    
T  46648172 atttttaagtttaaaattcatgattttattttcttat 46648208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 26886677 - 26886749
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||  |||||||  ||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  26886677 atttcaatttgttcctttttctccattttcatatgaatttttaagcttaaaattcatgattttattttcttat 26886749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 332 - 444
Target Start/End: Original strand, 43264080 - 43264198
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||| ||||||||| | ||||||| ||||||| ||| |||||  | |||||| ||      |||||||||||||| |||||||||||||||||||||    
T  43264080 aaaattatacttttagtccattaacttaattttagataataatttggtcctttatctttttttcatttcaattttgtcattttgatccatttacatatga 43264179  T
Q  426 atttttaagtttaaaattc 444  Q
    ||||||||| |||||||||    
T  43264180 atttttaagcttaaaattc 43264198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 388 - 462
Target Start/End: Original strand, 18568090 - 18568164
Alignment:
Q  388 ttatttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||| ||| ||||  | ||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  18568090 ttatttcaatttggtcttttttgttcattttcatatgaatttttaagcttaaaattcatgattttattttcttat 18568164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 462
Target Start/End: Complemental strand, 23963158 - 23963022
Alignment:
Q  333 aaattacacttttagttccttaactttattttaggtaacaatttaat-------tctttatattatttcaattttgtccttttgatccatttacatatga 425  Q
    |||||||||||||||| ||||||||| |||||||||||||||||  |       ||||| | | ||||||||||| |||||||| | ||||| |||||||    
T  23963158 aaattacacttttagtcccttaacttaattttaggtaacaatttcgtccttttatctttttttcatttcaattttatccttttggttcatttgcatatga 23963059  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||| ||  || ||||||||| ||||||||||||||    
T  23963058 attttcaaacttcaaattcatggttttattttcttat 23963022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 459
Target Start/End: Original strand, 49498428 - 49498561
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| |||||| ||||| |||| |||||||||||||||||  | |||||| ||      ||||||||||| |||||||| ||||||| |||||||    
T  49498428 aaaattacaattttagctccttgacttaattttaggtaacaatttggtcctttatctttttttaatttcaattttatccttttggtccatttgcatatga 49498527  T
Q  426 atttttaagtttaaaattcatgattttattttct 459  Q
    ||||| ||  || ||||||||| |||||||||||    
T  49498528 attttcaaacttcaaattcatggttttattttct 49498561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 16020268 - 16020132
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaattta------attctttatattatttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||| | |||       ||| ||| | | |||||||||| ||| ||||  ||||||| |||||||    
T  16020268 aaaattacacttttagtaccttaacttaatttcaggtaatagtttggtctttattttttttttcatttcaatttggtcatttttgtccattttcatatga 16020169  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  16020168 atttttaagcttaaaatttatgattttattttcttat 16020132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 36868035 - 36868171
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| |||||||||||||| || |||| || ||||| |||  | |||||| ||      |||||||||| ||||||||  || |||| |||||||    
T  36868035 aaaattacatttttagttccttaatttaatttcagataacagtttggtcctttatctttttttcatttcaatttggtcctttttgtctattttcatatga 36868134  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    | ||||||| |||||||||||||||||||||||||||    
T  36868135 aattttaagcttaaaattcatgattttattttcttat 36868171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 401 - 462
Target Start/End: Complemental strand, 41935729 - 41935668
Alignment:
Q  401 gtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||  ||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  41935729 gtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttat 41935668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 331 - 462
Target Start/End: Original strand, 9644754 - 9644896
Alignment:
Q  331 taaaattacacttttagttccttaactttattttaggtaacaatttaattctttatattat-----------ttcaattttgtccttttgatccatttac 419  Q
    |||||||||| ||||||| ||||||||| |||||||||||||||||  | |||||  ||||           |||||||||||  ||||  |||||||||    
T  9644754 taaaattacatttttagtcccttaacttaattttaggtaacaatttggtcctttagtttatctttttttcttttcaattttgtatttttagtccatttac 9644853  T
Q  420 atatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||||||| || |||| |||||||||||||||||||    
T  9644854 atatgaatttttaagctttaaatccatgattttattttcttat 9644896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 22539754 - 22539826
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||  || ||||  ||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  22539754 atttcaatttgctcttttttgtccattttcatatgaatttttaaggttaaaattcatgattttattttcttat 22539826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 461
Target Start/End: Complemental strand, 53563434 - 53563299
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| ||||||| ||||||||| ||||||| |||||||||| |  ||||| ||      |||||| ||| ||||||||| ||||||| |||||      
T  53563434 aaaattacatttttagtcccttaacttaattttagataacaatttagtcatttatctttttttcatttcactttggtccttttggtccatttgcatattg 53563335  T
Q  426 atttttaagtttaaaattcatgattttattttctta 461  Q
    ||||| ||| |||||||||||| |||||||||||||    
T  53563334 attttcaagcttaaaattcatgtttttattttctta 53563299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 41376895 - 41376759
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    |||||| |||||||||| | ||||||| ||||||| ||||| |||  |||||||| ||      ||||||||||  || ||||  ||||||| |||||      
T  41376895 aaaatttcacttttagtccattaacttaattttagataacagtttggttctttatctttttttcatttcaatttgatcatttttgtccattttcatatat 41376796  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  41376795 atttttaagcttaaaattcatgattttattttcttat 41376759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 410 - 462
Target Start/End: Original strand, 7067329 - 7067381
Alignment:
Q  410 atccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||| ||||    
T  7067329 atccattttcatatgaaattttaagtttaaaattcatgattttatttttttat 7067381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 17362366 - 17362437
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||| ||||  ||||||| |||||||||||| ||| |||||||||||||||||||||||||||    
T  17362366 atttcaatttggtcatttttgtccattttcatatgaatttt-aagcttaaaattcatgattttattttcttat 17362437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 17688019 - 17688067
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  17688019 aggtaaaattacacttttagttccttaacttaatttcaggtaacaattt 17688067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 50512734 - 50512662
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||| |||||||||||||| ||||||||||| ||| || ||||||||  ||||||||||||||    
T  50512734 atttcaatttcgtcattttgatccatttaaatatgaattttcaagcttcaaattcatagttttattttcttat 50512662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 462
Target Start/End: Original strand, 18635912 - 18635979
Alignment:
Q  395 aattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||||||||||| |||||||| || ||| || ||| ||||| ||||||||||||||    
T  18635912 aattttgtccttttgatccatttatatatgaatgttcaagctttaaactcatgcttttattttcttat 18635979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 462
Target Start/End: Original strand, 32188002 - 32188053
Alignment:
Q  411 tccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  32188002 tccattttcatacgaaattttaagtttaaaattcatgattttattttcttat 32188053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 386
Target Start/End: Original strand, 26842799 - 26842857
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||||||||||||||||||||||| |||| |||||||| |||  ||||||||    
T  26842799 aggtaaaattacacttttagttccttaacttaatttcaggtaacagtttggttctttat 26842857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 46674838 - 46674766
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||||||| | ||||| |||||  ||||||||| |||||||| ||||||||||||| ||||    
T  46674838 atttcaatttggtccttttggttcattttcatatatatttttaagcttaaaatttatgattttatttttttat 46674766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 31857892 - 31857838
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||||||||||||||||||| |||| |||||||| |||  ||||||||    
T  31857892 aaaattacacttttagttccttaacttaatttcaggtaacagtttggttctttat 31857838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 10993628 - 10993672
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||||    
T  10993628 aaaattacacttttagtcccttaacttaatttcaggtaacaattt 10993672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 16530321 - 16530365
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||||    
T  16530321 aaaattacacttttagtcccttaacttaatttcaggtaacaattt 16530365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 18568337 - 18568297
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||||||||||||| |||| ||||||||    
T  18568337 aaaattacacttttagttccttaacttaatttcaggtaaca 18568297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 37068688 - 37068728
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  37068688 aaaattacacttttagtcccttaacttaattttaggtaaca 37068728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 38556189 - 38556117
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||| ||||| ||| ||||  ||||||| |||||  ||||||||| |||| ||||||||||||||||||||||    
T  38556189 attttaatttagtcatttttgtccattttcatatacatttttaagcttaagattcatgattttattttcttat 38556117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 45656003 - 45655963
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  45656003 aaaattacacttttagtcccttaacttaattttaggtaaca 45655963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 50161114 - 50161158
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||    
T  50161114 aggtaaaattacacaattagtcccttaactttattttaggtaaca 50161158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 376
Target Start/End: Complemental strand, 39792233 - 39792186
Alignment:
Q  329 ggtaaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    |||||||||||| ||||||| ||||||||| |||| ||||||||||||    
T  39792233 ggtaaaattacatttttagtcccttaacttaatttcaggtaacaattt 39792186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 418
Target Start/End: Original strand, 42009438 - 42009532
Alignment:
Q  330 gtaaaattacacttttagttccttaactttattttaggtaacaatttaat------tctttatattatttcaattttgtccttttgatccattta 418  Q
    ||||||||||| ||||| ||||||||||| | |||||||||||||||  |      ||||| | | |||| ||||||||||||||||||||||||    
T  42009438 gtaaaattacaattttaattccttaacttaactttaggtaacaatttggtcttttatctttttttcattttaattttgtccttttgatccattta 42009532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 462
Target Start/End: Original strand, 5618209 - 5618259
Alignment:
Q  412 ccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||| |||||||||||| ||| || | ||||||||||||||||||||||    
T  5618209 ccatttgcatatgaattttcaagcttcatattcatgattttattttcttat 5618259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 7067553 - 7067499
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||||||||| ||||||||| |||| |||||||| ||| || ||||||    
T  7067553 aaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttat 7067499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 16019960 - 16020014
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||||||||| ||||||||| |||| |||||||| ||| || ||||||    
T  16019960 aaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttat 16020014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 21053638 - 21053584
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||  ||||| ||||||||||||||||||||||| ||| || ||||||    
T  21053638 aaaattacacaattagtcccttaactttattttaggtaacactttcatcctttat 21053584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 22539998 - 22539945
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||||||||| ||||||||| |||| | ||||||||||||| ||||||    
T  22539998 aaaattacacttttagtcccttaacttaatttca-gtaacaatttaatcctttat 22539945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 420 - 462
Target Start/End: Original strand, 24270459 - 24270501
Alignment:
Q  420 atatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||| ||||||| |||||||||||||||||||||| ||||    
T  24270459 atatgaacttttaagcttaaaattcatgattttatttttttat 24270501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Original strand, 41905950 - 41905995
Alignment:
Q  397 ttttgtccttttgatccatttacatatgaatttttaagtttaaaat 442  Q
    ||||| ||||||||||||||| |||||| ||||| |||||||||||    
T  41905950 ttttgcccttttgatccattttcatatggattttcaagtttaaaat 41905995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 3546833 - 3546793
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  |||||| ||||||||||||||||||||||    
T  3546833 aaaattacacaattagtttcttaactttattttaggtaaca 3546793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 9525808 - 9525848
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  9525808 aaaattacacaattagtcccttaactttattttaggtaaca 9525848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 13294945 - 13294905
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  13294945 aaaattacacaattagtcccttaactttattttaggtaaca 13294905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 20930978 - 20931018
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  20930978 aaaattacacaattagtcccttaactttattttaggtaaca 20931018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 20931320 - 20931280
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||||||||||||||||||||| |||||    
T  20931320 aaaattacacgattagttccttaactttattttagataaca 20931280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 20984225 - 20984185
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  20984225 aaaattacacttttagtcccttaacttaatttcaggtaaca 20984185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 23163284 - 23163324
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  23163284 aaaattacacaattagtcccttaactttattttaggtaaca 23163324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 23163622 - 23163582
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  23163622 aaaattacacaattagtcccttaactttattttaggtaaca 23163582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 367
Target Start/End: Complemental strand, 23572913 - 23572877
Alignment:
Q  331 taaaattacacttttagttccttaactttattttagg 367  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  23572913 taaaattacacttttagtcccttaacttaattttagg 23572877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 26202525 - 26202565
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  26202525 aaaattacacaattagtcccttaactttattttaggtaaca 26202565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 30799291 - 30799335
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||  ||||| ||||||||| |||||||||||||    
T  30799291 aggtaaaattacacaattagtcccttaacttaattttaggtaaca 30799335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 32922070 - 32922110
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  32922070 aaaattacacttttagtcccttaacttaatttcaggtaaca 32922110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 33369512 - 33369552
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  33369512 aaaattacacaattagtcccttaactttattttaggtaaca 33369552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 33692265 - 33692305
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  33692265 aaaattacacaattagtcccttaactttattttaggtaaca 33692305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 37872770 - 37872810
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  37872770 aaaattacacaattagtcccttaactttattttaggtaaca 37872810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 41689392 - 41689432
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  41689392 aaaattacacaattagtcccttaactttattttaggtaaca 41689432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 46143613 - 46143573
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  46143613 aaaattacacaattagtgccttaactttattttaggtaaca 46143573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 49621442 - 49621482
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  49621442 aaaattacacaattagtcccttaactttattttaggtaaca 49621482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 49621780 - 49621740
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  49621780 aaaattacacaattagtcccttaactttattttaggtaaca 49621740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 50161459 - 50161419
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  50161459 aaaattacacaattagtcccttaactttattttaggtaaca 50161419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 52538190 - 52538150
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  52538190 aaaattacacttttagtcccttaacttaatttcaggtaaca 52538150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 52654243 - 52654203
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  52654243 aaaattacacttttagtcccttaacttaatttcaggtaaca 52654203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 55742624 - 55742664
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  55742624 aaaattacacaattagtcccttaactttattttaggtaaca 55742664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 90; Significance: 3e-43; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 328 - 462
Target Start/End: Complemental strand, 26874542 - 26874402
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacat 421  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||| | |||||| ||      ||||||||||||||||||||||||||||||||    
T  26874542 aggtaaaattacacttttagtcccttaactttattttaggtaacagtttagtcctttatctttttttcatttcaattttgtccttttgatccatttacat 26874443  T
Q  422 atgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  26874442 atgaatatttaagcttaaaattcatgattttattttcttat 26874402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 334 - 462
Target Start/End: Complemental strand, 45315565 - 45315431
Alignment:
Q  334 aattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatgaat 427  Q
    ||||||| ||||||| |||||||||||||||||||||||||||| | |||||| ||      ||||||||||||||||||||||||||||||||||||||    
T  45315565 aattacatttttagtcccttaactttattttaggtaacaatttagtcctttatctttttttcatttcaattttgtccttttgatccatttacatatgaat 45315466  T
Q  428 ttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||| |||||||||||||||||||||||||||    
T  45315465 ttttaagcttaaaattcatgattttattttcttat 45315431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 5586490 - 5586626
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    |||||||||||||| || |||||||||||||||||||||||||||| | |||||| ||      ||||||||||||||||||||||||||||||||||||    
T  5586490 aaaattacacttttggtcccttaactttattttaggtaacaatttagtcctttatctttttttcatttcaattttgtccttttgatccatttacatatga 5586589  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||| ||||| |||||||||||||||||||||||||||    
T  5586590 attattaagcttaaaattcatgattttattttcttat 5586626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 34480495 - 34480359
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||| | |||||| ||      |||||||||||||| |||||||||||||||||||||    
T  34480495 aaaattacacttttagtcccttaactttattttaagtaacaatttagtcctttatctttttttcatttcaattttgtcattttgatccatttacatatga 34480396  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  34480395 atttttaagcttaaaattcatgattttattttcttat 34480359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 6489183 - 6489047
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||| |  ||||| ||      ||||||||||||||||||||||||||||||||||||    
T  6489183 aaaattacaattttagtcccttaactttattttaggtaacagtttagtcatttatctttttttcatttcaattttgtccttttgatccatttacatatga 6489084  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  6489083 atttttaagcttaaaattcatgattttattttcttat 6489047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 328 - 462
Target Start/End: Complemental strand, 731114 - 730974
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttat-att-----atttcaattttgtccttttgatccatttacat 421  Q
    ||||||||||||||||||||| ||||||||| |||| |||||| |||||| | |||||| |||     |||||||||| ||||||||  ||||||| |||    
T  731114 aggtaaaattacacttttagtcccttaacttaatttcaggtaataatttagtcctttatcattttttcatttcaatttggtcctttttgtccattttcat 731015  T
Q  422 atgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  731014 atgaaattttaagtttaaaattcatgattttattttcttat 730974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 28554437 - 28554365
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28554437 atttcaattttgtcattttgatccatttacatatgaatttttaagattaaaattcatgattttattttcttat 28554365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 39673147 - 39673011
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| ||||||| ||||| |||  | |||||| ||      |||||||||| ||||||||  || |||| |||||||    
T  39673147 aaaattacacttttagtcccttaacttaattttagataacagtttggtcctttatctttttttcatttcaatttggtcctttttgtctattttcatatga 39673048  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||||||||||||||||||||||||    
T  39673047 atttttaagtttaaaattcatgattttattttcttat 39673011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 45286235 - 45286371
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    |||||||||||||||||  |||||||| |||| ||||||||||||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  45286235 aaaattacacttttagtctcttaacttaatttcaggtaacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 45286334  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  45286335 atttttaagcttaaaattcatgattttattttcttat 45286371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 336 - 462
Target Start/End: Complemental strand, 5618378 - 5618246
Alignment:
Q  336 ttacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatgaattt 429  Q
    ||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||||||    
T  5618378 ttacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatgaattt 5618279  T
Q  430 ttaagtttaaaattcatgattttattttcttat 462  Q
    ||||| |||||||||||||||||||||||||||    
T  5618278 ttaagcttaaaattcatgattttattttcttat 5618246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 8853406 - 8853270
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  8853406 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatttttttttcatttcaatttggtcctttttgtccattttcatatga 8853307  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    | ||||||| |||||||||||||||||||||||||||    
T  8853306 acttttaagcttaaaattcatgattttattttcttat 8853270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 328 - 462
Target Start/End: Original strand, 33471415 - 33471550
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt----atttcaattttgtccttttgatccatttacatat 423  Q
    ||||||||||||||||||||| ||||||||| |||| |||||||| |||  | ||| || ||    |||||||||| ||||||||  |   ||| |||||    
T  33471415 aggtaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtccttcatcttttttatttcaatttggtccttttttt---ttttcatat 33471511  T
Q  424 gaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33471512 gaatttttaagtttaaaattcatgattttattttcttat 33471550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 323 - 462
Target Start/End: Complemental strand, 1501839 - 1501694
Alignment:
Q  323 tattcaggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatt 416  Q
    |||| ||||||||||| ||||||||| |||||| || |||| |||||||| |||  | |||||| ||      |||| |||||  |||||||  ||||||    
T  1501839 tattgaggtaaaattatacttttagtcccttaatttaatttcaggtaacagtttggtcctttatcttttttttattttaatttgatcctttttgtccatt 1501740  T
Q  417 tacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    | ||||||||||||||||||||||||||||||||||||||||||||    
T  1501739 ttcatatgaatttttaagtttaaaattcatgattttattttcttat 1501694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 12650233 - 12650097
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| | ||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||| ||||  |||||||  ||||||    
T  12650233 aaaattacacttttagtcctttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcatttttgtccatttttatatga 12650134  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||||||||||||||||||||||||    
T  12650133 atttttaagtttaaaattcatgattttattttcttat 12650097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 457
Target Start/End: Original strand, 17191201 - 17191333
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaat------tctttatatt-atttcaattttgtccttttgatccatttacatatg 424  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||||  |      ||||||| || |||||||||| ||||||||  |||||||  |||||    
T  17191201 aaaattacacttttagtcccttaacttaatttcaggtaacaatttggtcatttatctttattttcatttcaatttggtcctttttgtccatttttatatg 17191300  T
Q  425 aatttttaagtttaaaattcatgattttatttt 457  Q
    |||||||||| ||||||||||||||||||||||    
T  17191301 aatttttaagcttaaaattcatgattttatttt 17191333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 17504354 - 17504218
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| ||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||| ||||  ||||||| |||||||    
T  17504354 aaaattacatttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcatttttgtccattttcatatga 17504255  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  17504254 atttttaagcttaaaattcatgattttattttcttat 17504218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 40934419 - 40934557
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt--------atttcaattttgtccttttgatccatttacatat 423  Q
    ||||||||||||||||| | ||||||| ||||| ||||||| |||  | |||||| ||        |||||||||| ||||||||  ||||||| |||||    
T  40934419 aaaattacacttttagtccattaacttaattttgggtaacagtttggtcctttatctttttttttcatttcaatttggtcctttttgtccattttcatat 40934518  T
Q  424 gaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  40934519 gaatttttaagcttaaaattcatgattttattttcttat 40934557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 44344335 - 44344199
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| | ||||||| |||| |||||||| |||| | |||||| ||      |||||||||| |||||||| ||| ||||  |||| |    
T  44344335 aaaattacacttttagtccgttaacttaatttcaggtaacagtttagtcctttatctttttttcatttcaatttggtcctttttatctatttttatatta 44344236  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  44344235 atttttaagcttaaaattcatgattttattttcttat 44344199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 40770207 - 40770279
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||  |||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40770207 atttcaatttgatcctttttgtccattttcatatgaatttttaagtttaaaattcatgattttattttcttat 40770279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 48524801 - 48524666
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaat-----tctttatattatttcaattttgtccttttgatccatttacatatgaa 426  Q
    ||||||||||||||| ||||||||||| |||| || ||||| |||  |     ||||| | | |||||||||| ||| ||||  ||||||| ||||||||    
T  48524801 aaaattacacttttaattccttaacttaatttcagataacagtttggtatttatctttttttcatttcaatttggtcttttttgtccattttcatatgaa 48524702  T
Q  427 tttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||| |||||||||||||||||||||||||||    
T  48524701 tttttaagcttaaaattcatgattttattttcttat 48524666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 388 - 462
Target Start/End: Original strand, 50312070 - 50312144
Alignment:
Q  388 ttatttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||| ||||| ||||||||  ||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  50312070 ttattttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttat 50312144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 30146370 - 30146234
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||| ||| |||| |||||||| ||| || || ||| ||      |||| ||||| ||||||||  |||||||  || |||    
T  30146370 aaaattacacttttagtcccttagcttaatttcaggtaacagtttgatcctatatctttttttcattttaatttggtcctttttgtccatttgaatttga 30146271  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||||||||||||||||||||||||    
T  30146270 atttttaagtttaaaattcatgattttattttcttat 30146234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 16515701 - 16515773
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| | ||||||  ||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  16515701 atttcaatttggacctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttat 16515773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 32694312 - 32694447
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaat-----tctttatattatttcaattttgtccttttgatccatttacatatgaa 426  Q
    ||||||| ||||||||| ||||||||| |||  ||||||||||||  |     ||||| | | |||| ||||| ||||||||  ||||||| | ||||||    
T  32694312 aaaattatacttttagtcccttaacttaattacaggtaacaatttggtccttatctttttttcattttaatttggtcctttttgtccattttcgtatgaa 32694411  T
Q  427 tttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||| |||||||||||||||||||||||||||    
T  32694412 tttttaagcttaaaattcatgattttattttcttat 32694447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 388 - 462
Target Start/End: Original strand, 46283467 - 46283541
Alignment:
Q  388 ttatttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||| |||||  |||||||  | ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  46283467 ttattttaatttgctcctttttgttcattttcatatgaatttttaagtttaaaattcatgattttattttcttat 46283541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 3459882 - 3459810
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||| ||||  ||||||| |||||||| ||||||| |||||||||||||||||||||||||||    
T  3459882 atttcaatttggtcatttttgtccattttcatatgaaattttaagcttaaaattcatgattttattttcttat 3459810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 4695003 - 4695075
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||| ||||  ||||||| |||||||||||||||  |||||||||||||||||||||||||||    
T  4695003 atttcaatttggtcttttttgtccattttcatatgaatttttaaacttaaaattcatgattttattttcttat 4695075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 8828826 - 8828754
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| |||| |||  |||||||  ||||||||||||||| |||||||||||||||||||||||||||    
T  8828826 atttcaatttggtcccttttgtccatttttatatgaatttttaagcttaaaattcatgattttattttcttat 8828754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 394 - 462
Target Start/End: Original strand, 27547013 - 27547081
Alignment:
Q  394 caattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||| ||||||||  |||| || |||||||||||||||| |||||||||||||||||||||||||||    
T  27547013 caatttagtcctttttgtccactttcatatgaatttttaagattaaaattcatgattttattttcttat 27547081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 329 - 462
Target Start/End: Complemental strand, 8641261 - 8641120
Alignment:
Q  329 ggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatattattt------caattttgtccttttg--atccatttaca 420  Q
    |||||||||||||||||||| ||||||||| |||| | |||||| |||  | |||||| || |||      |||||| ||||||||   |||||||   |    
T  8641261 ggtaaaattacacttttagtcccttaacttaatttcaagtaacagtttggtcctttatcttttttttattgcaatttggtcctttttttatccattatta 8641162  T
Q  421 tatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  8641161 tatgaatttttaagcttaaaattcatgattttattttcttat 8641120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 391 - 462
Target Start/End: Original strand, 9877471 - 9877542
Alignment:
Q  391 tttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||  |||||||  ||||||| |||||||| ||||||| |||||||||||||||||||||||||||    
T  9877471 tttcaatttgatcctttttgtccattttcatatgaaattttaagcttaaaattcatgattttattttcttat 9877542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 462
Target Start/End: Complemental strand, 10296840 - 10296767
Alignment:
Q  388 ttatttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||| ||  ||||| ||||||| |||||||||||||||| |||||||||||||||||||||| ||||    
T  10296840 ttatttcaatttggtttttttg-tccattttcatatgaatttttaagcttaaaattcatgattttattttattat 10296767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 48970766 - 48970839
Alignment:
Q  390 atttcaattttgtccttttg-atccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||||||  |||||||| |||||  ||||||||||||||||||||||||||||||| |||||    
T  48970766 atttcaatttggtccttttttatccattttcatatacatttttaagtttaaaattcatgattttatttacttat 48970839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 459
Target Start/End: Complemental strand, 24234847 - 24234715
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt-----atttcaattttgtccttttgatccatttacatatgaa 426  Q
    ||||||||| ||||||| ||||||||| ||||||||||| | |||  | || ||| ||     |||||||||| ||||||||  || |||||||||||||    
T  24234847 aaaattacaattttagtcccttaacttaattttaggtaatagtttggtcctatattttttttcatttcaatttggtcctttttgtctatttacatatgaa 24234748  T
Q  427 tttttaagtttaaaattcatgattttattttct 459  Q
    |||| ||| || ||||||||| |||||||||||    
T  24234747 ttttcaagcttcaaattcatggttttattttct 24234715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 50208361 - 50208498
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt-------atttcaattttgtccttttgatccatttacatatg 424  Q
    |||| ||||||||||||  |||||||| |||| || ||||||||| || |||||| ||       |||||||||| ||||||||  ||||||| |||||     
T  50208361 aaaaatacacttttagtctcttaacttaatttcagataacaatttgatcctttatcttttttttcatttcaatttggtcctttttgtccattttcatata 50208460  T
Q  425 aatttttaagtttaaaattcatgattttattttcttat 462  Q
    || ||| ||  |||||||||||||||||||||||||||    
T  50208461 aaatttaaaacttaaaattcatgattttattttcttat 50208498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 386
Target Start/End: Original strand, 8828575 - 8828633
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||||||||||||| ||||||||| |||| |||||||| |||||| ||||||    
T  8828575 aggtaaaattacacttttagtcccttaacttaatttcaggtaacagtttaatcctttat 8828633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 45569086 - 45569143
Alignment:
Q  405 ttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||| ||| ||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  45569086 ttttggtcctttttcatatgaatttttaagcttataattcatgattttattttcttat 45569143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 43726452 - 43726380
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||| ||||| || |||||  ||||||| |||||||| ||||||| ||||||||||| |||||||||||||||    
T  43726452 attttaatttggttctttttgtccattttcatatgaacttttaagcttaaaattcataattttattttcttat 43726380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 376
Target Start/End: Complemental strand, 40770454 - 40770407
Alignment:
Q  329 ggtaaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||||    
T  40770454 ggtaaaattacacttttagtcccttaacttaatttcaggtaacaattt 40770407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 376
Target Start/End: Complemental strand, 40934732 - 40934685
Alignment:
Q  329 ggtaaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||||    
T  40934732 ggtaaaattacacttttagtcccttaacttaatttcaggtaacaattt 40934685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 442
Target Start/End: Complemental strand, 48971012 - 48970895
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt---atttcaattttgtccttttgatccatttacatatg 424  Q
    ||||||||||||| ||||||| ||||||||| |||| |||||||| |||  | |||||| ||   |||||||||| ||| |||| |||||||| |||||     
T  48971012 aggtaaaattacatttttagtcccttaacttaatttcaggtaacattttggtcctttattttttcatttcaatttggtcatttttatccattttcatata 48970913  T
Q  425 aatttttaagtttaaaat 442  Q
     ||||| |||||| ||||    
T  48970912 cattttcaagtttcaaat 48970895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 393
Target Start/End: Original strand, 17504038 - 17504099
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatattattt 393  Q
    ||||||||||||||||| ||||||||| |||| |||||||| ||| || |||||| ||||||    
T  17504038 aaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttattttattt 17504099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 442
Target Start/End: Original strand, 39672839 - 39672955
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||| | |||||| ||      |||||||||| |||||||| ||||||||  ||||      
T  39672839 aaaattacacttttagtcccttaacttaatttcaggtaacagtttagtcctttatctttttttcatttcaatttggtcctttttatccatttttatatac 39672938  T
Q  426 atttttaagtttaaaat 442  Q
    ||||| |||||| ||||    
T  39672939 attttcaagtttcaaat 39672955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 457
Target Start/End: Original strand, 14465070 - 14465126
Alignment:
Q  401 gtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttatttt 457  Q
    |||||||||||| |||| |||||||||||| ||| ||||| || |||||||||||||    
T  14465070 gtccttttgatcaattttcatatgaattttcaagattaaagtttatgattttatttt 14465126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 16087040 - 16087112
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||| || ||||| | ||||| |||||||||||| ||  || ||||||||| ||||||||||||||    
T  16087040 atttcaattttatcattttggttcatttgcatatgaattttcaaacttcaaattcatggttttattttcttat 16087112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 25780235 - 25780191
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||  ||||| |||||||||||||||||||||||    
T  25780235 aggtaaaattacacaattagtcccttaactttattttaggtaaca 25780191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 35521518 - 35521478
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  35521518 aaaattacacttttagtcccttaacttaattttaggtaaca 35521478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 49021734 - 49021805
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||| ||||  ||||||| |||||||||||| | | |||||||||||||||||| ||||||||    
T  49021734 atttcaatttggtcatttttgtccattttcatatgaatttt-atgcttaaaattcatgattttaatttcttat 49021805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 730802 - 730856
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||||||||| ||||||||| |||| ||||||||| ||| | ||||||    
T  730802 aaaattacacttttagtcccttaacttaatttcaggtaacaacttagtcctttat 730856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 16515949 - 16515891
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||||| ||||||| ||||||||| |||| |||||||| |||  ||||||||    
T  16515949 aggtaaaattacatttttagtcccttaacttaatttcaggtaacagtttggttctttat 16515891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 388 - 454
Target Start/End: Original strand, 24506549 - 24506615
Alignment:
Q  388 ttatttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttat 454  Q
    |||| ||| |||||||||||||||| |||| |||||||||||||||  || |||| |||| ||||||    
T  24506549 ttatgtcatttttgtccttttgatcaatttgcatatgaatttttaatgtttaaatccatggttttat 24506615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 30563126 - 30563072
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||  ||||| ||||||||||||||||||||||| |||  ||||||||    
T  30563126 aaaattacacgattagtcccttaactttattttaggtaacactttcgttctttat 30563072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 373
Target Start/End: Original strand, 44344026 - 44344067
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaa 373  Q
    ||||||||||||||||| ||||||||| |||| |||||||||    
T  44344026 aaaattacacttttagtcccttaacttaatttcaggtaacaa 44344067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 2026724 - 2026764
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  2026724 aaaattacacaattagtcccttaactttattttaggtaaca 2026764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 4695247 - 4695207
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  4695247 aaaattacacttttagtcccttaacttaatttcaggtaaca 4695207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 5586798 - 5586758
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  5586798 aaaattacacttttagtcccttaacttaatttcaggtaaca 5586758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 5618074 - 5618114
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  5618074 aaaattacacttttagtcccttaacttaatttcaggtaaca 5618114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 6488874 - 6488914
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  6488874 aaaattacacttttagtcccttaacttaatttcaggtaaca 6488914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 7113868 - 7113908
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  7113868 aaaattacacaattagtcccttaactttattttaggtaaca 7113908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 8853099 - 8853139
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  8853099 aaaattacacttttagtcccttaacttaatttcaggtaaca 8853139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 10296591 - 10296635
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||| ||||||||||| ||||||||| |||| ||||||||    
T  10296591 aggtaaaataacacttttagtcccttaacttaatttcaggtaaca 10296635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 12139367 - 12139327
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  12139367 aaaattacacaattagtcccttaactttattttaggtaaca 12139327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 12649925 - 12649965
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  12649925 aaaattacacttttagtcccttaacttaatttcaggtaaca 12649965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 17985286 - 17985330
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||  |||||  ||||||||||||||||||||||    
T  17985286 aggtaaaattacacaattagtctcttaactttattttaggtaaca 17985330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 426 - 462
Target Start/End: Original strand, 25012751 - 25012787
Alignment:
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||  ||||||||||||||||||||||||||    
T  25012751 atttttaagcataaaattcatgattttattttcttat 25012787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 25012958 - 25012918
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  25012958 aaaattacacttttagtcccttaacttaatttcaggtaaca 25012918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 26095801 - 26095761
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  26095801 aaaattacacttttagtcccttaacttaatttcaggtaaca 26095761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 27065391 - 27065320
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||| ||||  | ||||| |||||  ||||||||| ||||| |||||||||||||||||||||    
T  27065391 atttcaatttggtcatttttgttcattttcatatacatttttaagcttaaa-ttcatgattttattttcttat 27065320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 27067242 - 27067202
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||| ||||||||| ||||||||| |||||||||||||    
T  27067242 aaaattatacttttagtcccttaacttaattttaggtaaca 27067202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 28554193 - 28554233
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  28554193 aaaattacacttttagtcccttaacttaatttcaggtaaca 28554233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 31289257 - 31289297
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  31289257 aaaattacacttttagtcccttaacttaatttcaggtaaca 31289297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 34480187 - 34480227
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  34480187 aaaattacacttttagtcccttaacttaatttcaggtaaca 34480227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 40902330 - 40902370
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  40902330 aaaattacacaattagtcccttaactttattttaggtaaca 40902370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 43726216 - 43726256
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||||||||||||| |||| || |||||    
T  43726216 aaaattacacttttagttccttaacttaatttcagataaca 43726256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 48173711 - 48173639
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||| ||||   ||| ||| ||||||||||| ||| |||||||| ||| ||||||||| ||||    
T  48173711 atttcaattttgtcttttttgaccaattatatatgaattttcaagcttaaaatttatgcttttatttttttat 48173639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 6e-41; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 10925413 - 10925277
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||| |||||| ||      ||||||||||| || |||||||||||||||||||||    
T  10925413 aaaattacacttttagtcccttaactttattttaggtatcaatttaatcctttatctttttttcatttcaattttatctttttgatccatttacatatga 10925314  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  10925313 atttttaagcttaaaattcatgattttattttcttat 10925277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 27712767 - 27712903
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| |||||| |||||||||||||||| |||| | |||||| ||      ||||||||||||||||||||||||||||||||||||    
T  27712767 aaaattacacttttagtcccttaattttattttaggtaacagtttagtcctttatctttttttcatttcaattttgtccttttgatccatttacatatga 27712866  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  27712867 atttttaagcttaaaattcatgattttattttcttat 27712903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 30253937 - 30253801
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||| | |||||| ||      ||||||||||||||||||||||||||||||||||||    
T  30253937 aaaattacacttttagtcccttaactttattttaggtaacagtttagtcctttatctttttttcatttcaattttgtccttttgatccatttacatatga 30253838  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  30253837 atttttaagcttaaaagtcatgattttattttcttat 30253801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 21661038 - 21660902
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    |||||||||| |||||| ||||||||||||||||||||||  |||| | |||||| ||      ||||||||||||||||||||||||||||||||||||    
T  21661038 aaaattacacatttagtcccttaactttattttaggtaacggtttagtcctttatctttttttcatttcaattttgtccttttgatccatttacatatga 21660939  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  21660938 atttttaagcttaaaattcatgattttattttcttat 21660902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 28828527 - 28828391
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||| | |||||| ||      ||||||||||||||||||||||||||||| ||||||    
T  28828527 aaaattacacttttagtcccttaactttattttaggtaataatttagtcctttatctttttttcatttcaattttgtccttttgatccatttaaatatga 28828428  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  28828427 atttttaagcttaaaattcatgcttttattttcttat 28828391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 30463917 - 30464053
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||| | |||||| ||      |||||||||||||| |||||||||||||||||||||    
T  30463917 aaaattacatttttagtcccttaactttattttaggtaacagtttagtcctttatctttttttcatttcaattttgtcattttgatccatttacatatga 30464016  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  30464017 atttttaagcttaaaattcatgattttattttcttat 30464053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 34632228 - 34632364
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||  | |||||||||||||||||||||||||||| | |||||| ||      ||||||||||||||||||||||||||||||||||||    
T  34632228 aaaattacacttttgatcccttaactttattttaggtaacaatttagtcctttatctttttttcatttcaattttgtccttttgatccatttacatatga 34632327  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  34632328 atttttaagcttaaaattcataattttattttcttat 34632364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 37727202 - 37727338
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| |||||||||||||| |||||||| |||| | |||||| ||      ||||||||||||||||||||||||||||||||| ||    
T  37727202 aaaattacacttttagtcccttaactttatttcaggtaacagtttagtcctttatctttatttaatttcaattttgtccttttgatccatttacatacga 37727301  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  37727302 atttttaagcttaaaattaatgattttattttcttat 37727338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 328 - 462
Target Start/End: Original strand, 1235583 - 1235723
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacat 421  Q
    ||||||||||||||||||| |   |||| |||||||||||||||| |||| |  ||||| ||      |||||||||||||||||| |||||||||||||    
T  1235583 aggtaaaattacacttttaatcatttaattttattttaggtaacagtttagtcatttatctttttttcatttcaattttgtcctttcgatccatttacat 1235682  T
Q  422 atgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  1235683 atgaatttttaagcttaaaattcatgattttattttcttat 1235723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 331 - 455
Target Start/End: Original strand, 34213387 - 34213517
Alignment:
Q  331 taaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatg 424  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||  | |||||| ||      ||||||||||||||||||||||||||||| |||||    
T  34213387 taaaattacacttttagtcccttaactttattttaggtaacagtttggtcctttatctttatttaatttcaattttgtccttttgatccatttatatatg 34213486  T
Q  425 aatttttaagtttaaaattcatgattttatt 455  Q
    |||||||||  |||||||| |||||||||||    
T  34213487 aatttttaaccttaaaattaatgattttatt 34213517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 4968322 - 4968185
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtcctttt-gatccatttacatatg 424  Q
    ||||||||||||||||||| ||||  |||||| |||||||| |||| | |||||| ||      ||||||||||||||||||| ||||||||||||||||    
T  4968322 aaaattacacttttagttcattaatcttatttcaggtaacagtttagtcctttatctttttttcatttcaattttgtcctttttgatccatttacatatg 4968223  T
Q  425 aatttttaagtttaaaattcatgattttattttcttat 462  Q
    || ||||||| |||||||||||||||||||||||||||    
T  4968222 aacttttaagcttaaaattcatgattttattttcttat 4968185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 9887137 - 9887274
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtcctttt-gatccatttacatatg 424  Q
    ||||||||||||||||||| ||||  |||||| |||||||| |||| | |||||| ||      ||||||||||||||||||| ||||||||||||||||    
T  9887137 aaaattacacttttagttcattaatcttatttcaggtaacagtttagtcctttatctttttttcatttcaattttgtcctttttgatccatttacatatg 9887236  T
Q  425 aatttttaagtttaaaattcatgattttattttcttat 462  Q
    || ||||||| |||||||||||||||||||||||||||    
T  9887237 aacttttaagcttaaaattcatgattttattttcttat 9887274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 26938495 - 26938361
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt----atttcaattttgtccttttgatccatttacatatgaat 427  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||| | |||||| ||    |||||||||| ||| ||||  ||||||| |||||  |     
T  26938495 aaaattacacttttagtcccttaacttaattttaggtaacaatttagtcctttatttttttcatttcaatttggtcatttttgtccattttcatatacag 26938396  T
Q  428 ttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||| |||||||||||||||||||||||||||    
T  26938395 ttttaagcttaaaattcatgattttattttcttat 26938361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 29596405 - 29596541
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  29596405 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 29596504  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  29596505 atttttaagcttaaaattcatgattttattttcttat 29596541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 34199146 - 34199010
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||| ||| ||||||||| ||||||||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  34199146 aaaattacactttcagtcccttaacttaattttaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 34199047  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    || |||||| |||||||||||||||||||||||||||    
T  34199046 atctttaagcttaaaattcatgattttattttcttat 34199010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 329 - 462
Target Start/End: Complemental strand, 42685102 - 42684963
Alignment:
Q  329 ggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacata 422  Q
    ||||||||||| ||||||||  |||||||| |||||| ||||||||||  | |||||| ||      |||||||||| ||| ||||  ||||||| ||||    
T  42685102 ggtaaaattactcttttagtctcttaacttaattttaagtaacaatttggtcctttatctttttttcatttcaatttggtcttttttgtccattttcata 42685003  T
Q  423 tgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  42685002 tgaatttttaagcttaaaattcatgattttattttcttat 42684963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 328 - 462
Target Start/End: Original strand, 8156708 - 8156847
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt-----atttcaattttgtccttttgatccatttacata 422  Q
    ||||||||||| |||||||||  |||||||| |||| | |||||| ||| || |||||| ||     |||||||||| ||||||||  ||||||| ||||    
T  8156708 aggtaaaattatacttttagtctcttaacttaatttcaagtaacagtttgatcctttatcttttttcatttcaatttggtcctttttgtccattttcata 8156807  T
Q  423 tgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||| ||||||| |||||||||||||||||||||||||||    
T  8156808 tgaaattttaagcttaaaattcatgattttattttcttat 8156847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 18805749 - 18805884
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| ||||||||||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||| |||| |||||||| |||||||    
T  18805749 aaaattacatttttagttccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcatttttatccattttcatatga 18805848  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  18805849 atttttaagcttaaaattcatgatttt-ttttcttat 18805884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 333 - 462
Target Start/End: Complemental strand, 17495033 - 17494898
Alignment:
Q  333 aaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatgaa 426  Q
    |||||||||||||||| ||||||||| |||| |||||||| |||  |  ||||| ||      |||||||||| ||| |||| ||||||||  |||||||    
T  17495033 aaattacacttttagtcccttaacttaatttcaggtaacattttggtcatttatctttttttcatttcaatttggtcatttttatccatttttatatgaa 17494934  T
Q  427 tttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||| |||||||||||||||||||||||||||    
T  17494933 tttttaagcttaaaattcatgattttattttcttat 17494898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 39198927 - 39198792
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt-----atttcaattttgtccttttgatccatttacatatgaa 426  Q
    ||||||||||||||| | ||||||||| |||| |||||||| |||  | |||||| ||     |||||||||| |||||| |  ||||||| ||||||||    
T  39198927 aaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatcttttttcatttcaatttggtccttattgtccattttcatatgaa 39198828  T
Q  427 tttttaagtttaaaattcatgattttattttcttat 462  Q
     ||||||| |||||||||||||||||||||||||||    
T  39198827 attttaagcttaaaattcatgattttattttcttat 39198792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 434
Target Start/End: Complemental strand, 35560967 - 35560859
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaat------tctttatattatttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||||| ||||||| ||||||||||||| ||||||      ||||| | | ||||||||||| ||||||||||||| |||||||||     
T  35560967 aaaattacacttttagttctttaacttaattttaggtaacagtttaatcatttatctttttttcatttcaattttatccttttgatccagttacatatgg 35560868  T
Q  426 atttttaag 434  Q
    |||||||||    
T  35560867 atttttaag 35560859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 29726774 - 29726702
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||||||  ||||||| |||||||||||||||| |||||||| ||||||||||||||||||    
T  29726774 atttcaatttggtcctttttgtccattttcatatgaatttttaagcttaaaatttatgattttattttcttat 29726702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 43497513 - 43497382
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaat-tctttatattatttcaattttgtccttttgatccatttacatatgaatttt 430  Q
    ||||||||| ||||| | ||||||||| ||||||||||| | |||  | ||||| | | |||||||||| ||||||||| ||||||| ||||||||||||    
T  43497513 aaaattacaattttaatcccttaacttaattttaggtaatattttggtatctttttttcatttcaatttcgtccttttggtccatttgcatatgaatttt 43497414  T
Q  431 taagtttaaaattcatgattttattttcttat 462  Q
     ||| || ||||||||| ||||||||| ||||    
T  43497413 caagcttcaaattcatggttttatttttttat 43497382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 33278938 - 33279075
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgat-ccatttacatatg 424  Q
    |||||||||||||||||  |||||||| |||| ||||||||||||  |  ||||  ||      |||||||||| ||||||||  | |||||| ||||||    
T  33278938 aaaattacacttttagtctcttaacttaatttcaggtaacaatttggtcttttacctttttttcatttcaatttggtccttttttttccattttcatatg 33279037  T
Q  425 aatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| |||||||||||||||||||||||||||    
T  33279038 aatttttaagcttaaaattcatgattttattttcttat 33279075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 36556602 - 36556674
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||| ||||| ||| ||||  ||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  36556602 attttaatttggtcatttttgtccattttcatatgaacttttaagtttaaaattcatgattttattttcttat 36556674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 395 - 462
Target Start/End: Original strand, 26187200 - 26187267
Alignment:
Q  395 aattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||||||| |||||||||||||||||||| ||| || ||||||||| ||||||||| ||||    
T  26187200 aattttgtccttttggtccatttacatatgaattttcaagcttcaaattcatggttttatttttttat 26187267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 2241474 - 2241610
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    |||||| |||||||||| ||||||||| |||| |||||| | |||  | |||||| ||      |||||| ||||||||||||| ||||||| | ||||     
T  2241474 aaaatttcacttttagtcccttaacttaatttcaggtaatagtttggtcctttatcttttcttcatttcagttttgtccttttggtccatttgcgtatgg 2241573  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||| ||| || ||||||||| ||||||||||||||    
T  2241574 attttcaagcttcaaattcatggttttattttcttat 2241610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 336 - 460
Target Start/End: Original strand, 38655018 - 38655148
Alignment:
Q  336 ttacacttttagttccttaactttattttaggtaacaatttaattctttatattattt-------caattttgtccttttgatccatttacatatgaatt 428  Q
    |||||||||||| |  ||||||| |||||| ||||||||||| |||||||| ||||||       ||||||||| | |||| ||||||| |||||  |||    
T  38655018 ttacacttttagatttttaacttaattttaagtaacaatttatttctttattttatttttcattgcaattttgt-catttggtccatttgcatattgatt 38655116  T
Q  429 tttaagtttaaaattcatgattttattttctt 460  Q
    || |||||| |||||||||||||| |||||||    
T  38655117 ttcaagtttcaaattcatgattttcttttctt 38655148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 18806060 - 18806012
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    ||||||||||||||||||||| |||| |||| |||||||||||||||||    
T  18806060 aggtaaaattacacttttagtccctttacttaattttaggtaacaattt 18806012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 462
Target Start/End: Complemental strand, 33527163 - 33527115
Alignment:
Q  414 atttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||| |||||||| ||||||| |||||||||||||||||||||||||||    
T  33527163 attttcatatgaaattttaagcttaaaattcatgattttattttcttat 33527115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 40277446 - 40277397
Alignment:
Q  413 catttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||| |||||  ||||||||| |||||||||||||||||||||||||||    
T  40277446 cattttcatatacatttttaagcttaaaattcatgattttattttcttat 40277397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 148296 - 148340
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    |||||||||||||| || ||||||||| |||||||||||||||||    
T  148296 aaaattacacttttggtcccttaacttaattttaggtaacaattt 148340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 430
Target Start/End: Complemental strand, 2241722 - 2241682
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttt 430  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  2241722 atttcaattttgtccttttggtccatttgcatatgaatttt 2241682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 12649727 - 12649655
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||| |||||| | |||||| ||||||| |||||||||||| ||  || ||||||||| ||||||||||||||    
T  12649727 atttaaatttttttcttttggtccattttcatatgaattttcaaacttcaaattcatggttttattttcttat 12649655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 13327265 - 13327319
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||  ||||||||||||||| ||||||||||||| ||| || ||||||    
T  13327265 aaaattacacaattagttccttaacttaattttaggtaacactttcatcctttat 13327319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 42684790 - 42684844
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||  ||||||||    
T  42684790 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggttctttat 42684844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 18929769 - 18929839
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||||||  || |||| |||  || |||||||  |||||||||||||||||||||||||||    
T  18929769 atttcaatttggtcctttttgtctattttcat--gagtttttaaacttaaaattcatgattttattttcttat 18929839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 430
Target Start/End: Complemental strand, 26187439 - 26187335
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| ||||||| | ||||||| |||| |||||||| |||  | |||||| ||      |||||||||||||||||||| ||||||| ||||||     
T  26187439 aaaattacaattttagtccgttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaattttgtccttttggtccattttcatatgg 26187340  T
Q  426 atttt 430  Q
    |||||    
T  26187339 atttt 26187335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 2968212 - 2968172
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  2968212 aaaattacacaattagtcccttaactttattttaggtaaca 2968172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 7672639 - 7672687
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    |||||||||||||||||||||  |||||||| |||||| |||| |||||    
T  7672639 aggtaaaattacacttttagtctcttaacttaattttatgtaataattt 7672687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 14577208 - 14577168
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  14577208 aaaattacacaattagtcccttaactttattttaggtaaca 14577168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 17494767 - 17494811
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    ||||||||||||||||| ||||||||| |||| ||| ||||||||    
T  17494767 aaaattacacttttagtcccttaacttaatttcaggaaacaattt 17494811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 17875771 - 17875811
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  17875771 aaaattacacaattagtcccttaactttattttaggtaaca 17875811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 17876112 - 17876072
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  17876112 aaaattacacaattagtcccttaactttattttaggtaaca 17876072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 21660729 - 21660769
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  21660729 aaaattacacttttagtcccttaacttaatttcaggtaaca 21660769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 27713075 - 27713035
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  27713075 aaaattacacttttagtcccttaacttaatttcaggtaaca 27713035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 27912440 - 27912400
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  27912440 aaaattacacaattagtcccttaactttattttaggtaaca 27912400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 27958859 - 27958819
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  27958859 aaaattacacaattagtcccttaactttattttaggtaaca 27958819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 28828219 - 28828263
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    ||||||||||||||||| ||||||||| |||| | ||||||||||    
T  28828219 aaaattacacttttagtcccttaacttaatttcaagtaacaattt 28828263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 30253629 - 30253669
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  30253629 aaaattacacttttagtcccttaacttaatttcaggtaaca 30253669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 30904702 - 30904662
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  30904702 aaaattacacaattagtcccttaactttattttaggtaaca 30904662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 33279249 - 33279209
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  33279249 aaaattacacttttagtcccttaacttaatttcaggtaaca 33279209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 34632540 - 34632496
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||| ||||||| ||||||||| |||| ||||||||    
T  34632540 aggtaaaattacatttttagtcccttaacttaatttcaggtaaca 34632496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 35482705 - 35482745
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  35482705 aaaattacacaattagtcccttaactttattttaggtaaca 35482745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 35483044 - 35483004
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  35483044 aaaattacacaattagtcccttaactttattttaggtaaca 35483004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 39198618 - 39198658
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  39198618 aaaattacacttttagtcccttaacttaatttcaggtaaca 39198658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 6e-41; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 10714011 - 10714147
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    |||||||||||||| || |||||||||||||||||||||||||||| | |||||| ||      ||||||||||||||||||||||||||||||||||||    
T  10714011 aaaattacacttttggtcccttaactttattttaggtaacaatttagtcctttatctttttttcatttcaattttgtccttttgatccatttacatatga 10714110  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||| ||||| |||||||||||||||||||||||||||    
T  10714111 attattaagcttaaaattcatgattttattttcttat 10714147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 2450091 - 2450227
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||| | ||||| ||||||||||||||||||||||||| |||| | |||||| ||      |||| ||||||||| |||||||||||||||||||||    
T  2450091 aaaattataattttacttccttaactttattttaggtaacagtttagtcctttatctttttttcattttaattttgtctttttgatccatttacatatga 2450190  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  2450191 atttttaagcttaaaattcatgattttattttcttat 2450227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 22486062 - 22486134
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22486062 atttcaattttgtccttttgatccatttacatatgaatttttaagcttaaaattcatgattttattttcttat 22486134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 328 - 462
Target Start/End: Original strand, 9911908 - 9912051
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt---------atttcaattttgtccttttgatccattta 418  Q
    ||||||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||         |||||||||| ||||||||  |||||||     
T  9911908 aggtaaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatcttttttttttcatttcaatttggtcctttttgtccatttt 9912007  T
Q  419 catatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  9912008 catatgaatttttaagtttaaaattcatgattttattttcttat 9912051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 44490307 - 44490443
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||||||||||||| |||| |||||||| |||| | |||||| ||      |||||||||| ||||||||  ||||||| ||||| |    
T  44490307 aaaattacacttttagttccttaacttaatttcaggtaacagtttagtcctttatctttttttaatttcaatttggtcctttttgtccattttcatataa 44490406  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    | ||||||| |||||||||||||||||||||||||||    
T  44490407 aattttaagcttaaaattcatgattttattttcttat 44490443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 323 - 462
Target Start/End: Original strand, 17549062 - 17549208
Alignment:
Q  323 tattcaggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt-------atttcaattttgtccttttgatccat 415  Q
    |||| ||| ||||||||| ||||||| ||||||||| |||| |||||||| |||| | |||||| ||       |||| ||||| ||||||||  |||||    
T  17549062 tattgaggaaaaattacatttttagtcccttaacttaatttcaggtaacagtttagtcctttatcttttttttcattttaatttggtcctttttgtccat 17549161  T
Q  416 ttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    || ||||||||||||||||||||||||||||||||||||||||||||    
T  17549162 tttcatatgaatttttaagtttaaaattcatgattttattttcttat 17549208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 9027336 - 9027200
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||| | ||||||||| |||| |||||||| |||| | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  9027336 aaaattacacttttaatcccttaacttaatttcaggtaacagtttagtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 9027237  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  9027236 atttttaagcttagaattcatgattttattttcttat 9027200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 26499722 - 26499586
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||| ||||  ||||||| |||||||    
T  26499722 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcatttttgtccattttcatatga 26499623  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    | |||||||||||||||||||||||||||||||||||    
T  26499622 acttttaagtttaaaattcatgattttattttcttat 26499586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 10192087 - 10192224
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaat-------tctttatattatttcaattttgtccttttgatccatttacatatg 424  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||||  |       ||||| | | |||||||||| | ||||||  ||||||| ||||||    
T  10192087 aaaattacacttttagtcccttaacttaatttcaggtaacaatttggtccttttatctttttttcatttcaatttggccctttttgtccattttcatatg 10192186  T
Q  425 aatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| |||||||||||||||||||||||||||    
T  10192187 aatttttaagcttaaaattcatgattttattttcttat 10192224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 328 - 459
Target Start/End: Complemental strand, 3889186 - 3889049
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacat 421  Q
    ||||||||||||||||||||| ||||||||| |||| |||||||| ||| || |||||| ||      |||||||||| ||||||||  || |||| |||    
T  3889186 aggtaaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatttttttttcatttcaatttggtcctttttgtctattttcat 3889087  T
Q  422 atgaatttttaagtttaaaattcatgattttattttct 459  Q
    || |||||||||  ||||||||||||||||||||||||    
T  3889086 ataaatttttaatcttaaaattcatgattttattttct 3889049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 331 - 462
Target Start/End: Complemental strand, 11724929 - 11724792
Alignment:
Q  331 taaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatg 424  Q
    ||||||||||||||||||  |||||||| |||| || ||| | |||  |||||||| ||      |||||||||| ||||||||  ||||||| ||||||    
T  11724929 taaaattacacttttagtctcttaacttaatttcagataaaagtttggttctttatctttttttcatttcaatttggtcctttttgtccattttcatatg 11724830  T
Q  425 aatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| |||||||||||||||||||||||||||    
T  11724829 aatttttaagcttaaaattcatgattttattttcttat 11724792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 23926394 - 23926530
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||||||||||||| |||| |||||||| |||  |  ||||| ||      |||||||||| ||| ||||  ||||||| |||||||    
T  23926394 aaaattacacttttagttccttaacttaatttcaggtaacagtttcgtcatttatctttttttcatttcaatttggtcatttttgtccattttcatatga 23926493  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  23926494 atttttaagcttaaaattcatgattttatttttttat 23926530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 28789178 - 28789042
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| || ||||    
T  28789178 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcaaatga 28789079  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    | ||||||| |||||||||||||||||||||||||||    
T  28789078 aattttaagcttaaaattcatgattttattttcttat 28789042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 337 - 462
Target Start/End: Original strand, 29421701 - 29421832
Alignment:
Q  337 tacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatgaatttt 430  Q
    |||||||||||| ||||||||| |||| || ||||| ||| || |||||| ||      |||||||||| ||||||||  ||||||| ||||||||||||    
T  29421701 tacacttttagtcccttaacttaatttcagctaacagtttgatcctttatctttttttcatttcaatttggtcctttttgtccattttcatatgaatttt 29421800  T
Q  431 taagtttaaaattcatgattttattttcttat 462  Q
    |||| |||||||||||||||||||| ||||||    
T  29421801 taagcttaaaattcatgattttattctcttat 29421832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 42950586 - 42950658
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||||||  ||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  42950586 atttcaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttat 42950658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 336 - 462
Target Start/End: Complemental strand, 13421384 - 13421249
Alignment:
Q  336 ttacacttttagttccttaactttattttaggtaacaatttaattctttatatt---------atttcaattttgtccttttgatccatttacatatgaa 426  Q
    ||||||||||||| ||||||||| ||||||||||||| |||  | |||||| ||         |||||||||| ||||||||  |||||||  |||||||    
T  13421384 ttacacttttagtcccttaacttaattttaggtaacagtttgttcctttatctttttttttttatttcaatttggtcctttttgtccatttttatatgaa 13421285  T
Q  427 tttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||| |||||||||||||||||||||||||||    
T  13421284 tttttaagcttaaaattcatgattttattttcttat 13421249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 332 - 459
Target Start/End: Complemental strand, 30488391 - 30488258
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||| ||||  ||||||| |||||||    
T  30488391 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcttttttgtccattttcatatga 30488292  T
Q  426 atttttaagtttaaaattcatgattttattttct 459  Q
    ||||||||  ||||||||||||||||||||||||    
T  30488291 atttttaatcttaaaattcatgattttattttct 30488258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 341623 - 341487
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| ||||| | ||||||||| ||||||||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||      
T  341623 aaaattacagttttaatcccttaacttaattttaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatac 341524  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  341523 atttttaagcttaaaattcatgattttattttcttat 341487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 40657303 - 40657439
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    |||||||||||| |||| ||||||||| | || |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  40657303 aaaattacacttatagtcccttaacttaacttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 40657402  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    | ||||||| |||||||||||||||||||||||||||    
T  40657403 aattttaagcttaaaattcatgattttattttcttat 40657439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 1650570 - 1650642
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| || |||||  ||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  1650570 atttcaatttggttctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttat 1650642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 33274398 - 33274536
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaat------tctttatatt--atttcaattttgtccttttgatccatttacatat 423  Q
    ||||||||| ||||||| ||||||||| |||| |||||||| |||| |      ||||||| ||  |||||||||   |||||||  ||||||| |||||    
T  33274398 aaaattacatttttagtcccttaacttaatttcaggtaacagtttagtcttttatctttatttttcatttcaattcgatcctttttgtccattttcatat 33274497  T
Q  424 gaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  33274498 gaatttttaagcttaaaattcatgattttattttcttat 33274536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 1270112 - 1270248
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatattattt------caattttgtccttttgatccatttacatatga 425  Q
    ||||||||| ||||||| ||||||||| |||| |  ||||| |||  |||||||| ||||||      ||||||  |||||||  | ||||| |||||||    
T  1270112 aaaattacatttttagtcccttaacttaatttcacataacagtttggttctttatcttattttcatttcaatttgttcctttttgttcattttcatatga 1270211  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  1270212 atttttaagcttaaaattcatgattttattttcttat 1270248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 15461258 - 15461394
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||| | ||||||| | |||| ||||| || ||| || |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  15461258 aaaattacacttttaatcccttaacgtaatttcaggtaccagtttgatcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 15461357  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| ||||||||||| |||| ||||||||||    
T  15461358 atttttaagcttaaaattcataatttaattttcttat 15461394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 18449664 - 18449528
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| |||||| || || | |||||||| |||| |  ||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  18449664 aaaattacacttttagtgccttaatttaatatcaggtaacagtttagtcttttatctttttttcatttcaatttggtcctttttgtccattttcatatga 18449565  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    | ||||||| |||||||| ||||||||||||||||||    
T  18449564 aattttaagcttaaaatttatgattttattttcttat 18449528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 29154374 - 29154238
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| ||||||| ||||||||| ||||||||||||| |||  |  ||||| ||      |||||||||||||| ||||| || |||| |||||||    
T  29154374 aaaattacaattttagtcccttaacttaattttaggtaacagtttggtcttttatctttttttcatttcaattttgtctttttggtctatttgcatatga 29154275  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||| ||| || ||||||||| ||||||||||||||    
T  29154274 attttcaagcttcaaattcatggttttattttcttat 29154238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 29174925 - 29175063
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatattattt--------caattttgtccttttgatccatttacatat 423  Q
    ||||||||| ||||||| ||||||||| |||| |||||||| | | ||||||||| || |||        |||||| ||||||||  ||||||| |||||    
T  29174925 aaaattacatttttagtcccttaacttaatttcaggtaacagtcttattctttatctttttttttcttttcaatttggtcctttttgtccattttcatat 29175024  T
Q  424 gaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||| |||||||||||||| ||||||| ||||    
T  29175025 gaatttttaagcttaaaattcatgatattatttttttat 29175063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 35411880 - 35412016
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| ||||  ||||||  |||  | |||||| ||      |||| ||||| ||||||||  ||||||| |||||||    
T  35411880 aaaattacacttttagtcccttaacttaatttctggtaactgtttggtcctttatctttttttcattttaatttggtcctttttgtccattttcatatga 35411979  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    | ||||||| |||||||||||||||||||||||||||    
T  35411980 aattttaagcttaaaattcatgattttattttcttat 35412016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 42030542 - 42030678
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| | |||||| ||   | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  42030542 aaaattacacttttagtcccttaacttaatttcaagtaacagttaggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 42030641  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    | ||||||| |||||||||||||||||||||| ||||    
T  42030642 aattttaagcttaaaattcatgattttatttttttat 42030678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 31556814 - 31556886
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||||||  ||||||| ||||| |||||||||| ||||||||||||||||||||| |||||    
T  31556814 atttcaatttggtcctttttgtccattttcatataaatttttaagcttaaaattcatgattttatttacttat 31556886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 22899330 - 22899194
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||| | ||||||| ||||||||| |||| |||||||| |||  |||||||| ||      |||||||||| ||| ||||  |  |||| |||||||    
T  22899330 aaaattatatttttagtcccttaacttaatttcaggtaacagtttggttctttatctttttttcatttcaatttggtcatttttgtttattttcatatga 22899231  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    | |||||||||||||||| ||||||||||||||||||    
T  22899230 aattttaagtttaaaatttatgattttattttcttat 22899194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 332 - 457
Target Start/End: Original strand, 1479031 - 1479162
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaat------tctttatattatttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||||||||||||| |||| |||||| |||||  |      ||||| | | ||||||||||  | |||||  || |||| |||||||    
T  1479031 aaaattacacttttagttccttaacttaatttcaggtaataatttggtcatttatctttttttcatttcaatttgatactttttgtctattttcatatga 1479130  T
Q  426 atttttaagtttaaaattcatgattttatttt 457  Q
    ||||||||| ||||||||||||||||| ||||    
T  1479131 atttttaagcttaaaattcatgattttttttt 1479162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 11122711 - 11122783
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||| ||||  ||||||| | |||||||||||||| | |||||||||||||||||||||||||    
T  11122711 atttcaatttggtcatttttgtccattttcgtatgaatttttaagctcaaaattcatgattttattttcttat 11122783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 462
Target Start/End: Complemental strand, 11723932 - 11723881
Alignment:
Q  411 tccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||||||||    
T  11723932 tccatttttatatgaatttttaagcttaaaattcatgattttattttcttat 11723881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 332 - 442
Target Start/End: Complemental strand, 33274708 - 33274592
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||  | |||||| ||      |||||||||| || ||||| |||||||| |||||      
T  33274708 aaaattacacttttagtcccttaacttaattttaggtaacaatttggtcctttatcttcttttcatttcaatttggttctttttatccattttcatatac 33274609  T
Q  426 atttttaagtttaaaat 442  Q
    ||||| |||||| ||||    
T  33274608 attttcaagtttcaaat 33274592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 352 - 462
Target Start/End: Original strand, 37528082 - 37528195
Alignment:
Q  352 ttaactttattttaggtaacaatttaattcttta----tattatttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatg 447  Q
    ||||||| ||||||||||||||||||||| ||||    | ||||| || |||||| ||||| || ||||| ||||||||||||| || ||||||| ||||    
T  37528082 ttaacttaattttaggtaacaatttaattttttattttttttattgcatttttgttcttttcattcatttgcatatgaattttt-agcttaaaatccatg 37528180  T
Q  448 attttattttcttat 462  Q
     |||| |||||||||    
T  37528181 gttttcttttcttat 37528195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 406 - 457
Target Start/End: Complemental strand, 14121783 - 14121732
Alignment:
Q  406 tttgatccatttacatatgaatttttaagtttaaaattcatgattttatttt 457  Q
    ||||||| ||||||||||| |||||||||||| |||||||||||||| ||||    
T  14121783 tttgatctatttacatatgtatttttaagtttcaaattcatgattttctttt 14121732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 424
Target Start/End: Original strand, 29154067 - 29154165
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatg 424  Q
    ||||||||||||||||| ||||||||| |||| || |||||||||  | |||||| ||      |||||||||||||||||||| ||||||| ||||||    
T  29154067 aaaattacacttttagtcccttaacttaatttcagttaacaatttggtcctttatctttttttaatttcaattttgtccttttggtccattttcatatg 29154165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 462
Target Start/End: Complemental strand, 16350836 - 16350767
Alignment:
Q  395 aattttgtccttttgatccatttacatatgaattttt--aagtttaaaattcatgattttattttcttat 462  Q
    ||||| ||||||||  ||||||| |||||||||||||  ||| |||||||| ||||||||||||||||||    
T  16350836 aatttggtcctttttgtccattttcatatgaatttttttaagcttaaaatttatgattttattttcttat 16350767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 30842137 - 30842203
Alignment:
Q  393 tcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttct 459  Q
    ||||||||||| ||||| | |||||||||||||||||| ||| || ||||||||  |||||||||||    
T  30842137 tcaattttgtctttttggttcatttacatatgaattttcaagcttcaaattcatagttttattttct 30842203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 44536531 - 44536473
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||| ||| || ||||||    
T  44536531 aggtaaaattacacaattagtcccttaactttattttaggtaacactttcatcctttat 44536473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 3321999 - 3322135
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| |||||||  ||||| || ||||||||||||| |||  | |||||| ||      |||| ||||| ||||||||  | ||||| |||||      
T  3321999 aaaattacagttttagtctcttaatttaattttaggtaacagtttggtcctttatctttttttcattttaatttggtcctttttgttcattttcatatac 3322098  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||| || |||||||||||||||||||||||||||    
T  3322099 atttttgagcttaaaattcatgattttattttcttat 3322135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 462
Target Start/End: Original strand, 22195926 - 22196062
Alignment:
Q  331 taaaattacacttttagttccttaactttattttaggtaacaatttaattcttta-----tattatttcaattttgtccttttgatccatttacatatga 425  Q
    |||||||||| ||||||| ||||||||| ||||||||||||| |||  |  ||||     | | |||||||||| ||| ||||  |||||||  ||||      
T  22195926 taaaattacagttttagtcccttaacttaattttaggtaacagtttggtcatttatcctttttcatttcaatttggtcatttttgtccatttttatatac 22196025  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||  |||||||||||||||||| ||||||||    
T  22196026 atttttaaacttaaaattcatgattttactttcttat 22196062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 23926706 - 23926658
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    ||||||||||||||||||| | ||||||||| |||| ||||||||||||    
T  23926706 aggtaaaattacacttttaatcccttaacttaatttcaggtaacaattt 23926658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 437
Target Start/End: Complemental strand, 38574929 - 38574818
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| ||||||| ||||||||| |||| | |||||| |||  | |||||| ||      |||||||||| ||| |||| |||||||| |||||||    
T  38574929 aaaattacatttttagtcccttaacttaatttcatgtaacagtttggtcctttatctttttttcatttcaatttggtcatttttatccattttcatatga 38574830  T
Q  426 atttttaagttt 437  Q
    ||||||||||||    
T  38574829 atttttaagttt 38574818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 393
Target Start/End: Complemental strand, 601675 - 601614
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatattattt 393  Q
    ||||||||||  ||||| ||||||||||||||||||||||| |||  | |||||| ||||||    
T  601675 aaaattacacaattagtcccttaactttattttaggtaacacttttgtcctttatcttattt 601614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 377
Target Start/End: Complemental strand, 15461566 - 15461521
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaattta 377  Q
    ||||||||||||||||| ||||||||| |||| |||||||| ||||    
T  15461566 aaaattacacttttagtcccttaacttaatttcaggtaacagttta 15461521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 1650814 - 1650774
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  1650814 aaaattacacttttagtcccttaacttaatttcaggtaaca 1650774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 2318832 - 2318792
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  2318832 aaaattacacaattagtcccttaactttattttaggtaaca 2318792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 406 - 462
Target Start/End: Complemental strand, 2415556 - 2415500
Alignment:
Q  406 tttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||| |||||| ||||| |||||| ||| |||||||||||  ||||||||||||||    
T  2415556 tttgaaccatttgcatataaattttcaagcttaaaattcatatttttattttcttat 2415500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 4261152 - 4261196
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||  ||||| |||||| ||||||||||||||||    
T  4261152 aggtaaaattacacaattagtcccttaattttattttaggtaaca 4261196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 9320145 - 9320105
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  9320145 aaaattacacaattagtcccttaactttattttaggtaaca 9320105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 9912224 - 9912184
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||| | ||||||||| |||||||||||||    
T  9912224 aaaattacacttttaatcccttaacttaattttaggtaaca 9912184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 10044748 - 10044788
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  10044748 aaaattacacaattagtcccttaactttattttaggtaaca 10044788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 10108816 - 10108856
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  10108816 aaaattacacaattagtcccttaactttattttaggtaaca 10108856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 10714319 - 10714279
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  10714319 aaaattacacttttagtcccttaacttaatttcaggtaaca 10714279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 11723708 - 11723748
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||| ||||||| |||||||||||||| ||||||||    
T  11723708 aaaattacatttttagtcccttaactttatttcaggtaaca 11723748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 14951943 - 14951871
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||| ||||||||||||||   |||||| |||||  ||||| ||| ||||||||||||  |||||||||||||    
T  14951943 attttaattttgtccttttaggccatttgcatatagattttcaagcttaaaattcatgtatttattttcttat 14951871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 17846011 - 17846051
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  17846011 aaaattacacaattagtcccttaactttattttaggtaaca 17846051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 18508702 - 18508630
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||| || ||||  | ||||||||||||| |||| ||| || ||||||||  ||||||||||||||    
T  18508702 atttcaattttttcattttagttcatttacatatgatttttcaagcttcaaattcattgttttattttcttat 18508630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 18916628 - 18916668
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  18916628 aaaattacacaattagtcccttaactttattttaggtaaca 18916668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 19079506 - 19079434
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||| || ||| ||||  ||||||| |||||  ||||||| | || ||||||||||||||||||||||||    
T  19079506 atttcaaattggtcttttttgtccattttcatatacatttttatgcttgaaattcatgattttattttcttat 19079434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 20663969 - 20663929
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  20663969 aaaattacacttttagtcccttaacttaatttcaggtaaca 20663929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 26499425 - 26499465
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  26499425 aaaattacacttttagtcccttaacttaatttcaggtaaca 26499465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 27360464 - 27360424
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  27360464 aaaattacacaattagtcccttaactttattttaggtaaca 27360424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 30488083 - 30488127
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    ||||||||||||||| | ||||||||| |||| ||||||||||||    
T  30488083 aaaattacacttttaatcccttaacttaatttcaggtaacaattt 30488127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 434
Target Start/End: Complemental strand, 31556994 - 31556950
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaag 434  Q
    |||||||||| ||||||||  ||||||| ||||||||||||||||    
T  31556994 atttcaatttggtcctttttgtccattttcatatgaatttttaag 31556950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 35412188 - 35412148
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  35412188 aaaattacacttttagtcccttaacttaatttcaggtaaca 35412148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 2e-38; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 14655079 - 14655215
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||  | |||||| ||      ||||||||||||||||||||||||||||| ||||||    
T  14655079 aaaattacacttttagtcccttaactttattttaggtaacagtttggtcctttatctttatttaatttcaattttgtccttttgatccatttatatatga 14655178  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||||| ||||||||||||||||||    
T  14655179 atttttaagtttaaaattaatgattttattttcttat 14655215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 9220106 - 9220242
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||||| ||| || |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  9220106 aaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 9220205  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||||||||||||||||||||||||    
T  9220206 atttttaagtttaaaattcatgattttattttcttat 9220242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 24896484 - 24896347
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt-------atttcaattttgtccttttgatccatttacatatg 424  Q
    |||||||||||||| || ||||||||||||||||||||||| |||| |  ||||| ||       |||||||||||||| ||||||||||||||||||||    
T  24896484 aaaattacacttttggtcccttaactttattttaggtaacagtttagtcatttatcttttttttcatttcaattttgtcattttgatccatttacatatg 24896385  T
Q  425 aatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||| |||||  |||||||||||||||||||||||||||    
T  24896384 aatgtttaatcttaaaattcatgattttattttcttat 24896347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 388 - 462
Target Start/End: Complemental strand, 8488111 - 8488037
Alignment:
Q  388 ttatttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8488111 ttatttcaattttatccttttgatccatttacatatgaatttttaagcttaaaattcatgattttattttcttat 8488037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 1925119 - 1925255
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||| | |||| | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  1925119 aaaattacacttttagtcccttaacttaatttcaggtaaaagtttagtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 1925218  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||||||||||||||||||||||||    
T  1925219 atttttaagtttaaaattcatgattttattttcttat 1925255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 9546722 - 9546586
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||||| ||| || |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  9546722 aaaattacacttttagtcccttaacttaatttcaggtaacagtttgatcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 9546623  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  9546622 atttttaagcttaaaattcatgattttattttcttat 9546586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 9899198 - 9899334
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  9899198 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 9899297  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||||||||||||||||||||||||    
T  9899298 atttttaagtttaaaattcatgattttattttcttat 9899334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 328 - 462
Target Start/End: Complemental strand, 3105919 - 3105779
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacat 421  Q
    |||||||||| |||||||||| |||||| || |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||    
T  3105919 aggtaaaattgcacttttagtcccttaatttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcat 3105820  T
Q  422 atgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  3105819 atgaatttttaagtttaaaattcatgattttattttcttat 3105779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 330 - 462
Target Start/End: Complemental strand, 685266 - 685128
Alignment:
Q  330 gtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatat 423  Q
    |||||||||||||||||||  |||||||| |||| |||||||| |||| | |||||| ||      |||||||||| ||||||||  ||||||| |||||    
T  685266 gtaaaattacacttttagtctcttaacttaatttcaggtaacagtttagtcctttatctttttttcatttcaatttggtcctttttgtccattttcatat 685167  T
Q  424 gaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||| |||||||||||||||| ||||||||||    
T  685166 gaatttttaagcttaaaattcatgatttcattttcttat 685128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 17853954 - 17853818
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| || ||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  17853954 aaaattacacttttagtcccttaacttaatttcagataacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 17853855  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  17853854 atttttaagcttaaaattcatgattttattttcttat 17853818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 25121808 - 25121672
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| | ||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  25121808 aaaattacacttttagtcctttaacttaatttcaggtaacagtttggtcctttatcttttttgcatttcaatttggtcctttttgtccattttcatatga 25121709  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
     ||||||||||||||||||||||||||||||||||||    
T  25121708 ttttttaagtttaaaattcatgattttattttcttat 25121672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 28852191 - 28852327
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| ||||||||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||      
T  28852191 aaaattacacttttagtcccttaacttaattttaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatac 28852290  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  28852291 atttttaagcttaaaattcatgattttattttcttat 28852327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 22568766 - 22568902
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||  ||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  22568766 aaaattacttttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 22568865  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  22568866 atttttaagcttaaaattcatgattttattttcttat 22568902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 1136992 - 1136920
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||||||  ||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  1136992 atttcaatttggtcctttttgtccattttcatatgaaattttaagtttaaaattcatgattttattttcttat 1136920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 2316556 - 2316628
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||||||  ||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  2316556 atttcaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttat 2316628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 20027840 - 20027912
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||||||  ||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  20027840 atttcaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttat 20027912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 12240483 - 12240619
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    |||||||||||||||||   ||||||| ||||||||||||| ||| || |||||| ||      |||||||||   |||||||  ||||||| |||||||    
T  12240483 aaaattacacttttagtcttttaacttaattttaggtaacagtttgatcctttatcttttttttatttcaattcgatcctttttgtccattttcatatga 12240582  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  12240583 atttttaagcttaaaattcatgattttgttttcttat 12240619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 13178534 - 13178398
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| ||||||| ||||||||| ||||||||||||| |||  | |||||| ||      |||||||||| || |||||  ||||||| |||||      
T  13178534 aaaattacagttttagtcccttaacttaattttaggtaacattttggtcctttatctttttttcatttcaatttggttctttttgtccattttcatatac 13178435  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  13178434 atttttaagcttaaaattcatgattttattttcttat 13178398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 2863827 - 2863755
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||||||  ||||||| |||||||||||||||| |||||||||||||||| ||||||||||    
T  2863827 atttcaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgatttaattttcttat 2863755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 2883130 - 2883058
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||| ||||| |||||||| |||||||| |||||||||||||||| |||||||| ||||||||||||||||||    
T  2883130 attttaatttggtcctttttatccattttcatatgaatttttaagcttaaaattaatgattttattttcttat 2883058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 332 - 459
Target Start/End: Complemental strand, 32557448 - 32557313
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt--------atttcaattttgtccttttgatccatttacatat 423  Q
    ||||||||| ||||||| ||||||||| |||||||||||||||||  | |||||| ||        ||||||||||| |||||||||||||||| |||||    
T  32557448 aaaattacaattttagtcccttaacttaattttaggtaacaatttggtcctttatcttttttttttatttcaattttatccttttgatccatttgcatat 32557349  T
Q  424 gaatttttaagtttaaaattcatgattttattttct 459  Q
    ||||||| ||| || | ||| ||| |||||||||||    
T  32557348 gaattttcaagctttagatttatgcttttattttct 32557313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 328 - 462
Target Start/End: Complemental strand, 13853456 - 13853317
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacat 421  Q
    ||||||||||||||||||||| ||| ||||| |||| |||||||| |||  |  ||||| ||      |||||||||| ||| ||||  || |||| |||    
T  13853456 aggtaaaattacacttttagtccct-aacttaatttcaggtaacagtttggtcttttatctttttttcatttcaatttggtcttttttgtctattttcat 13853358  T
Q  422 atgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  13853357 atgaatttttaagcttaaaattcatgattttattttcttat 13853317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 21926311 - 21926239
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||| ||||| ||||||||  ||||||| |||||||||||||||  |||||||||||||||||||||||||||    
T  21926311 attttaatttggtcctttttgtccattttcatatgaatttttaaacttaaaattcatgattttattttcttat 21926239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 461
Target Start/End: Original strand, 24335536 - 24335673
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt--------atttcaattttgtccttttgatccatttacatat 423  Q
    |||||||||||||||||  ||||| || |||| ||||||||||||  | |||||| ||        |||| ||||| ||| ||||  ||||||| |||||    
T  24335536 aaaattacacttttagtctcttaatttaatttcaggtaacaatttggtcctttattttttttttccattttaatttggtcatttttgtccattttcatat 24335635  T
Q  424 gaatttttaagtttaaaattcatgattttattttctta 461  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  24335636 gaatttttaagcttaaaattcatgattttattttctta 24335673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 411 - 462
Target Start/End: Complemental strand, 3012139 - 3012088
Alignment:
Q  411 tccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  3012139 tccatttttatatgaatttttaagtttaaaattcatgattttattttcttat 3012088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 24325304 - 24325167
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt-------atttcaattttgtccttttgatccatttacatatg 424  Q
    ||||||||||||||| | ||||||||| |||| |||||||| |||  | |||||| ||       |||| ||| | ||||||||  ||||||| ||||||    
T  24325304 aaaattacacttttaatcccttaacttaatttcaggtaacagtttggtcctttatcttttttttcattttaatatggtcctttttgtccattttcatatg 24325205  T
Q  425 aatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  24325204 aatttttaagcttaaagttcatgattttattttcttat 24325167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 388 - 462
Target Start/End: Original strand, 8129598 - 8129672
Alignment:
Q  388 ttatttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||| ||||| ||||||||  ||||| | |||||||| ||||||| |||||||||||||||||||||||||||    
T  8129598 ttattttaatttggtcctttttgtccatgttcatatgaaattttaagcttaaaattcatgattttattttcttat 8129672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 11361792 - 11361928
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    |||||||||||||||||  ||||| || |||| |||||||| |||| |  ||||| ||      |||| |||||  |||||||  || |||| |||||||    
T  11361792 aaaattacacttttagtctcttaatttaatttcaggtaacagtttagtcatttatctttttttcattttaatttgttcctttttgtcaattttcatatga 11361891  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  11361892 atttttaagcttaaaattcatgattttattttcttat 11361928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 434
Target Start/End: Original strand, 21926067 - 21926175
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||||||      |||||||||| ||||||||  ||||||| |||||||    
T  21926067 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatatttttttcatttcaatttggtcctttttctccattttcatatga 21926166  T
Q  426 atttttaag 434  Q
    |||||||||    
T  21926167 atttttaag 21926175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 4137469 - 4137397
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||| ||||||||||| ||||| || || ||| |||||||| ||||||||| ||||||||||||||    
T  4137469 atttcaattttatccttttgatcaatttaaatttggattcttaagtttcaaattcatggttttattttcttat 4137397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 372
Target Start/End: Complemental strand, 22569078 - 22569034
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||    
T  22569078 aggtaaaattacacttttagtcccttaacttaattttaggtaaca 22569034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 684952 - 685000
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    ||||||||||||||||||||| ||||||||| |||| || |||||||||    
T  684952 aggtaaaattacacttttagtcccttaacttaatttcagataacaattt 685000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 438
Target Start/End: Original strand, 12109590 - 12109638
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagttta 438  Q
    ||||||||||| ||||||| |||||||| ||||| ||||||||||||||    
T  12109590 atttcaattttatccttttaatccattttcatataaatttttaagttta 12109638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 6755259 - 6755205
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||  ||||| ||||||||||||||||||||||| |||  ||||||||    
T  6755259 aaaattacacaattagtcccttaactttattttaggtaacactttcgttctttat 6755205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 33595322 - 33595376
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||  ||||| ||||||||||||||||||||||| |||  ||||||||    
T  33595322 aaaattacacaattagtcccttaactttattttaggtaacattttcgttctttat 33595376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 1925462 - 1925422
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  1925462 aaaattacacttttagtcccttaacttaatttcaggtaaca 1925422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 2316800 - 2316760
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  2316800 aaaattacacttttagtcccttaacttaatttcaggtaaca 2316760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 3218154 - 3218194
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  3218154 aaaattacacaattagtcccttaactttattttaggtaaca 3218194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 3218483 - 3218443
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  3218483 aaaattacacaattagtcccttaactttattttaggtaaca 3218443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 3922542 - 3922582
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  3922542 aaaattacacaattagtcccttaactttattttaggtaaca 3922582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 3922881 - 3922841
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  3922881 aaaattacacaattagtcccttaactttattttaggtaaca 3922841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 4243265 - 4243225
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  4243265 aaaattacacaattagtcccttaactttattttaggtaaca 4243225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 9899506 - 9899466
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  9899506 aaaattacacttttagtcccttaacttaatttcaggtaaca 9899466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 23068699 - 23068739
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  23068699 aaaattacacaattagtcccttaactttattttaggtaaca 23068739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 24324995 - 24325039
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    ||||||||||||||||| | ||||||| |||| ||||||||||||    
T  24324995 aaaattacacttttagtcctttaacttaatttcaggtaacaattt 24325039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 33595662 - 33595622
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  33595662 aaaattacacaattagtcccttaactttattttaggtaaca 33595622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 6e-38; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 333 - 462
Target Start/End: Original strand, 37092183 - 37092318
Alignment:
Q  333 aaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatgaa 426  Q
    |||||||||||||||  ||||||||||||||||||||||| |||| |  ||||| ||      |||||||||||||||||||||||||||||||||||||    
T  37092183 aaattacacttttagccccttaactttattttaggtaacagtttagtcatttatctttttttcatttcaattttgtccttttgatccatttacatatgaa 37092282  T
Q  427 tttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||| |||||||||||||||||||||||||||    
T  37092283 tttttaagcttaaaattcatgattttattttcttat 37092318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 13455985 - 13455851
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt----atttcaattttgtccttttgatccatttacatatgaat 427  Q
    ||||||||| ||||||| ||||||||| ||||||||||||| ||| || |||||| ||    |||||||||| |||||||| |||||||| |||||||||    
T  13455985 aaaattacatttttagtcccttaacttaattttaggtaacagtttgatcctttattttttttatttcaatttggtcctttttatccattttcatatgaat 13455886  T
Q  428 ttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||| |||||||||||||||||||||||||||    
T  13455885 ttttaagcttaaaattcatgattttattttcttat 13455851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 5239588 - 5239453
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaat-----tctttatattatttcaattttgtccttttgatccatttacatatgaa 426  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||| |     ||||| | | |||||||||||||||||||| ||||| ||||||||||    
T  5239588 aaaattatacttttaatcccttaactttattttaggtaacaatttagtctttatctttttttcatttcaattttgtccttttggtccatctacatatgaa 5239489  T
Q  427 tttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||  |||||||||||||||||||||||||||    
T  5239488 tttttaaacttaaaattcatgattttattttcttat 5239453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 8357312 - 8357240
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8357312 atttcaattttgtcattttgatccatttacatatgaatttttaagcttaaaattcatgattttattttcttat 8357240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 328 - 462
Target Start/End: Complemental strand, 2426545 - 2426404
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt-------atttcaattttgtccttttgatccatttaca 420  Q
    ||||||||||||||||||||| ||||||||| |||| || ||||| |||  |  ||||| ||       |||||||||| ||||||||  ||||||| ||    
T  2426545 aggtaaaattacacttttagtcccttaacttaatttcagataacagtttggtcttttatcttttttttcatttcaatttggtcctttttgtccattttca 2426446  T
Q  421 tatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  2426445 tatgaatttttaagtttaaaattcatgattttattttcttat 2426404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 32771994 - 32772130
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| | ||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  32771994 aaaattacacttttagtcctttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 32772093  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||| ||||||||||||||||||||||||||||    
T  32772094 atttttaactttaaaattcatgattttattttcttat 32772130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 33429844 - 33429708
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||    
T  33429844 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatga 33429745  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    || |||||| |||||||||||||||||||||||||||    
T  33429744 atgtttaagcttaaaattcatgattttattttcttat 33429708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 332 - 430
Target Start/End: Original strand, 14729451 - 14729552
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt---atttcaattttgtccttttgatccatttacatatgaatt 428  Q
    ||||||||||||||||| | ||||||||||||||||||||| |||| |  ||||| ||   |||||||||||||| ||||||||||||||||||||||||    
T  14729451 aaaattacacttttagtcctttaactttattttaggtaacagtttagtcttttatcttttcatttcaattttgtcattttgatccatttacatatgaatt 14729550  T
Q  429 tt 430  Q
    ||    
T  14729551 tt 14729552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 1098895 - 1099031
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| |||||| || |||| |||||||| |||| | |||||| ||      |||||||||| ||| ||||  ||||||| |||||||    
T  1098895 aaaattacacttttagtcccttaatttaatttcaggtaacagtttagtcctttatttttttttcatttcaatttggtcatttttgtccattttcatatga 1098994  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
     |||||||| |||||||||||||||||||||||||||    
T  1098995 ttttttaagcttaaaattcatgattttattttcttat 1099031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 1643542 - 1643678
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||      ||||| |||| ||||||||  ||||||| |||||||    
T  1643542 aaaattacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcgatttggtcctttttgtccattttcatatga 1643641  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  1643642 atttttaagcttaaaatttatgattttattttcttat 1643678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 2467062 - 2467198
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| ||||||| ||||||||| ||||||||||||| |||  | |||||| ||      |||||||||| ||||||||  || |||| |||||||    
T  2467062 aaaattacatttttagtcccttaacttaattttaggtaacagtttggtcctttatctttttttaatttcaatttggtcctttttgtcgattttcatatga 2467161  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    | ||||||| |||||||||||||||||||||||||||    
T  2467162 aattttaagcttaaaattcatgattttattttcttat 2467198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 3279189 - 3279327
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt--------atttcaattttgtccttttgatccatttacatat 423  Q
    ||||||||||||||||| ||| ||||| |||| |||||||| |||  | |||||| ||        ||||||||||  |||||||  ||||||| |||||    
T  3279189 aaaattacacttttagtccctcaacttaatttcaggtaacagtttggtcctttatcttttttattcatttcaatttgatcctttttgtccattttcatat 3279288  T
Q  424 gaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3279289 gaatttttaagtttaaaattcatgattttattttcttat 3279327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 328 - 462
Target Start/End: Original strand, 7610262 - 7610402
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacat 421  Q
    ||||||||||||||||||||| ||||||||| |||| |||||| | |||  | |||||| ||      |||||||||| ||||||||  |||||||  ||    
T  7610262 aggtaaaattacacttttagtcccttaacttaatttcaggtaatagtttggtcctttatctttttttcatttcaatttagtcctttttgtccatttttat 7610361  T
Q  422 atgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| ||| |||||||||||||||||||||||||||    
T  7610362 atgaattttcaagcttaaaattcatgattttattttcttat 7610402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 42611092 - 42610956
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||||| ||||||| |||| |||||||| |||  | |||||| ||      ||||||||||  ||||||   ||||||| |||||||    
T  42611092 aaaattacacttttagttctttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttgatcctttctgtccattttcatatga 42610993  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  42610992 atttttaagcttaaaattcatgattttattttcttat 42610956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 22621060 - 22621186
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatattatttcaattttgtccttttgatccatttacatatgaattttt 431  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||  | ||| || || |||  |||||     |||| ||||||| |||||||||||||    
T  22621060 aaaattacacttttagttccttaacttaattttaggtaacagtttggtcctt-atctttttttcattttaa---tttggtccattttcatatgaattttt 22621155  T
Q  432 aagtttaaaattcatgattttattttcttat 462  Q
    ||| |||||||||||||||||||||||||||    
T  22621156 aagcttaaaattcatgattttattttcttat 22621186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 37943772 - 37943700
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||| ||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37943772 atttcaatttggtcatttttgtccattttcatatgaatttttaagtttaaaattcatgattttattttcttat 37943700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 40952315 - 40952243
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||||||  ||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  40952315 atttcaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttat 40952243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 328 - 462
Target Start/End: Complemental strand, 14872050 - 14871909
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt-------atttcaattttgtccttttgatccatttaca 420  Q
    ||||||||||||| ||||| | ||||||||| |||| |||||||| |||  | |||||| ||       |||||||||| ||| ||||  ||||||| ||    
T  14872050 aggtaaaattacatttttaatcccttaacttaatttcaggtaacagtttggtcctttatcttttttttcatttcaatttggtcatttttgtccattttca 14871951  T
Q  421 tatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  14871950 tatgaatttttaagcttaaaattcatgattttattttcttat 14871909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 3974216 - 3974352
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||| |||||||| |||||||| |||| || |||||||||  | |||||| ||      |||||||||| ||||||||  ||||||| ||||||     
T  3974216 aaaattacatttttagtttcttaacttaatttcagataacaatttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatgc 3974315  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||  |||||||||||||||||||||||||||    
T  3974316 atttttaaacttaaaattcatgattttattttcttat 3974352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 16737114 - 16736978
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||| |||||  |  ||||| ||      |||||||||  ||| ||||  ||||||| |||||||    
T  16737114 aaaattacacttttagtcccttaacttaatttcaggtaataatttggtcatttatctttttttcatttcaattcggtcttttttgtccattttcatatga 16737015  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  16737014 atttttaagcttaaaattcatgattttattttcttat 16736978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 336 - 462
Target Start/End: Original strand, 19130877 - 19131009
Alignment:
Q  336 ttacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatgaattt 429  Q
    ||||||||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||||||||  ||||||| |||||||||||    
T  19130877 ttacacttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcctttttgtccattttcatatgaattt 19130976  T
Q  430 ttaagtttaaaattcatgattttattttcttat 462  Q
    ||||| || | ||||||||||||||||||||||    
T  19130977 ttaagctttatattcatgattttattttcttat 19131009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 461
Target Start/End: Complemental strand, 19984509 - 19984436
Alignment:
Q  388 ttatttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttctta 461  Q
    ||||||||||||  |||||||  ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  19984509 ttatttcaatttgatcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttctta 19984436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 31485960 - 31486096
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    |||||||||||||||||  |||||||| |||| |||||||| |||  | |||||| ||      |||||||||| ||| ||||  |||| || |||||||    
T  31485960 aaaattacacttttagtctcttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcttttttgtccaatttcatatga 31486059  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  31486060 atttttaagcttaaaattcatgattttattttcttat 31486096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 12854642 - 12854714
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||||||  ||||||| |||||||| ||||||| |||||||||||||||||||||||||||    
T  12854642 atttcaatttggtcctttttgtccattttcatatgaaattttaagcttaaaattcatgattttattttcttat 12854714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 24858714 - 24858578
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt-----atttcaattttgtccttttgat-ccatttacatatga 425  Q
    ||||||||||||||| | ||||||||| || | |||||||| ||| || |||||| ||     |||||||||| ||| ||||  | |||||| |||||||    
T  24858714 aaaattacacttttaatcccttaacttaatgtcaggtaacagtttgatcctttatcttttttcatttcaatttggtcattttttttccattttcatatga 24858615  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  24858614 atttttaagcttaaaattcatgattttattttcttat 24858578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 34159244 - 34159316
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||||||||||| ||| |||| |||||||||||||||| || |||||||||| |||||||||||||    
T  34159244 atttcaattttgtcctttttatctatttgcatatgaatttttaagcttcaaattcatgactttattttcttat 34159316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 2960897 - 2961033
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||| | | |||| || ||||||||||| | |||| | |||||| ||      |||||||||| ||||||||  |||||||  |||| |    
T  2960897 aaaattacacttttaatcctttaatttaattttaggtaagagtttagtcctttatctttttttcatttcaatttggtcctttttgtccatttttatatta 2960996  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  2960997 atttttaagcttaaaattcatgattttattttcttat 2961033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 2969365 - 2969501
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||| | | |||| || ||||||||||| | |||| | |||||| ||      |||||||||| ||||||||  |||||||  |||| |    
T  2969365 aaaattacacttttaatcctttaatttaattttaggtaagagtttagtcctttatctttttttcatttcaatttggtcctttttgtccatttttatatta 2969464  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  2969465 atttttaagcttaaaattcatgattttattttcttat 2969501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 462
Target Start/End: Original strand, 7601596 - 7601732
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||| | ||||||| ||||||||| |||| |||||||| |||  | |||||| ||      |||||||||| |||| |||  ||||||| |||||||    
T  7601596 aaaattatatttttagtcccttaacttaatttcaggtaacagtttggtcctttatctttttttcatttcaatttggtcccttttgtccattttcatatga 7601695  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    | ||||||| |||||||||||||||||||||||||||    
T  7601696 aattttaagcttaaaattcatgattttattttcttat 7601732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 13697385 - 13697457
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||||||  || |||| |||||||||||||||| |||||||||||||||||||||| ||||    
T  13697385 atttcaatttggtcctttttgtcaattttcatatgaatttttaagcttaaaattcatgattttatttttttat 13697457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 30129720 - 30129648
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||| ||||  || |||| |||||||||||||||| |||||||||||||||||||||||||||    
T  30129720 atttcaatttggtcatttttgtctattttcatatgaatttttaagcttaaaattcatgattttattttcttat 30129648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 411 - 462
Target Start/End: Original strand, 6540073 - 6540124
Alignment:
Q  411 tccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  6540073 tccattttcatatgaatttttaagcttaaaattcatgattttattttcttat 6540124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 420 - 462
Target Start/End: Complemental strand, 18707487 - 18707445
Alignment:
Q  420 atatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18707487 atatgaatttttaagtttaaaattcatgattttattttcttat 18707445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 33381675 - 33381604
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||||||  ||||||| |||||||||||| | | |||||||||||||||||||||||||||    
T  33381675 atttcaatttggtcctttttgtccattttcatatgaatttt-atgcttaaaattcatgattttattttcttat 33381604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 35160675 - 35160603
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||| ||||||| ||||||| || |||| |||||||||||| ||| || ||||||||||||||||||||||||    
T  35160675 attttaattttgaccttttggtcaatttgcatatgaattttcaagcttcaaattcatgattttattttcttat 35160603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 390 - 452
Target Start/End: Original strand, 13577332 - 13577394
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgatttt 452  Q
    |||| ||||| ||||||||  ||||||| |||||||||||||||| |||||||||||||||||    
T  13577332 attttaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgatttt 13577394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 22621358 - 22621304
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||||||||| ||||||||| ||||||||||| | |||| ||||||||    
T  22621358 aaaattacacttttagtcccttaacttaattttaggtaatagtttagttctttat 22621304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 442
Target Start/End: Original strand, 2426232 - 2426348
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||||||||||||| ||||||||| |||| |||||||| |||| | |||||| ||      |||||||||| ||||||||  |||||||  ||||      
T  2426232 aaaattacacttttagtcccttaacttaatttcaggtaacagtttagtcctttatctttttttcatttcaatttggtcctttttgtccatttttatatac 2426331  T
Q  426 atttttaagtttaaaat 442  Q
    |||||||||||| ||||    
T  2426332 atttttaagtttcaaat 2426348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 458
Target Start/End: Original strand, 13298025 - 13298085
Alignment:
Q  397 ttttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttc 458  Q
    |||||||||||||||| ||||||||||||||||| ||| || |||||  |||||||||||||    
T  13298025 ttttgtccttttgatcaatttacatatgaattttcaagattcaaatt-ttgattttattttc 13298085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 462
Target Start/End: Original strand, 261240 - 261283
Alignment:
Q  419 catatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||| |||||||||||||||||||||  ||||||||||||||    
T  261240 catatggatttttaagtttaaaattcatatttttattttcttat 261283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 2094915 - 2094861
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||  ||||| ||||||||||||||||||||||| ||| || ||||||    
T  2094915 aaaattacacaattagtcccttaactttattttaggtaacactttcatcctttat 2094861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 374
Target Start/End: Complemental strand, 2467370 - 2467328
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaat 374  Q
    ||||||||| ||||||||||||||||| |||| ||||||||||    
T  2467370 aaaattacatttttagttccttaacttaatttcaggtaacaat 2467328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 386
Target Start/End: Complemental strand, 6541520 - 6541466
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttat 386  Q
    ||||||||||||||||| | ||||||| ||||||||||||| ||| || ||||||    
T  6541520 aaaattacacttttagtcctttaacttaattttaggtaacagtttgatcctttat 6541466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 372
Target Start/End: Complemental strand, 1643851 - 1643810
Alignment:
Q  331 taaaattacacttttagttccttaactttattttaggtaaca 372  Q
    |||||||||||||||||| ||||||||| |||||| ||||||    
T  1643851 taaaattacacttttagtcccttaacttaattttaagtaaca 1643810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 462
Target Start/End: Complemental strand, 6647304 - 6647239
Alignment:
Q  397 ttttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||  |||| ||||||| |||| |||||| ||||  || |||||||||||||||    
T  6647304 ttttgtccttttgatttattttcatatgatttttcaagttttaaatcaattattttattttcttat 6647239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Original strand, 23226698 - 23226747
Alignment:
Q  413 catttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||||| || ||| ||||||||  ||||||||||||||    
T  23226698 catttacatatgaattttcaaatttcaaattcatagttttattttcttat 23226747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 3168097 - 3168137
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||||||||||||| |||| | ||||||    
T  3168097 aaaattacacttttagttccttaacttaatttcaagtaaca 3168137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 3279499 - 3279459
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||||| ||||||    
T  3279499 aaaattacacttttagtcccttaacttaattttaagtaaca 3279459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 7601904 - 7601864
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  7601904 aaaattacacttttagtcccttaacttaatttcaggtaaca 7601864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 12854887 - 12854847
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||| ||||||||||||||||||| |||| ||||||||    
T  12854887 aaaattagacttttagttccttaacttaatttcaggtaaca 12854847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 14871737 - 14871777
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  14871737 aaaattacacttttagtcccttaacttaatttcaggtaaca 14871777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 16736804 - 16736844
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  16736804 aaaattacacttttagtcccttaacttaatttcaggtaaca 16736844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 18485662 - 18485702
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  18485662 aaaattacacaattagtcccttaactttattttaggtaaca 18485702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 19131181 - 19131141
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  19131181 aaaattacacttttagtcccttaacttaatttcaggtaaca 19131141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 24858406 - 24858446
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||| ||||||| ||||||||| |||||||||||||    
T  24858406 aaaattacatttttagtcccttaacttaattttaggtaaca 24858446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 376
Target Start/End: Original strand, 30129478 - 30129522
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    ||||||||||||||||| | ||||||| |||| ||||||||||||    
T  30129478 aaaattacacttttagtcctttaacttaatttcaggtaacaattt 30129522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 30370514 - 30370554
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  30370514 aaaattacacaattagtcccttaactttattttaggtaaca 30370554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 32936548 - 32936508
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  32936548 aaaattacacaattagtcccttaactttattttaggtaaca 32936508  T

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Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 33429532 - 33429580
Alignment:
Q  328 aggtaaaattacacttttagttccttaactttattttaggtaacaattt 376  Q
    ||||||||||||||||||| | | ||||||| |||| ||||||||||||    
T  33429532 aggtaaaattacacttttaatcctttaacttaatttcaggtaacaattt 33429580  T

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Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 35362987 - 35363027
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  35362987 aaaattacacaattagtcccttaactttattttaggtaaca 35363027  T

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Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 35363332 - 35363292
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  35363332 aaaattacacaattagtcccttaactttattttaggtaaca 35363292  T

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Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 37093786 - 37093746
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  37093786 aaaattacacaattagtcccttaactttattttaggtaaca 37093746  T

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Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 39589618 - 39589658
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  39589618 aaaattacacttttagtcccttaacttaatttcaggtaaca 39589658  T

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Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 40833939 - 40833979
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  40833939 aaaattacacaattagtcccttaactttattttaggtaaca 40833979  T

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Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Complemental strand, 40834278 - 40834238
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  40834278 aaaattacacaattagtcccttaactttattttaggtaaca 40834238  T

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Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 40952070 - 40952110
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  40952070 aaaattacacttttagtcccttaacttaatttcaggtaaca 40952110  T

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Target: scaffold0009 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 258822 - 258894
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||||||  ||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  258822 atttcaatttggtcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttat 258894  T

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Target: scaffold0077 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 10230 - 10094
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatatt------atttcaattttgtccttttgatccatttacatatga 425  Q
    ||||||| ||||||| | ||||||||| |||| || |||||||||  | |||||| ||      |||||||||| ||  ||||  ||||||| |||||||    
T  10230 aaaattatacttttaatcccttaacttaatttcagataacaatttggtcctttatctttttgtcatttcaatttggtgttttttgtccattttcatatga 10131  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||||||||||||||||||||||||||||||    
T  10130 atttttaagtttaaaattcatgattttattttcttat 10094  T

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Target: scaffold0077; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 370
Target Start/End: Original strand, 9924 - 9962
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaa 370  Q
    |||||||||||||||||| |||||||| |||||||||||    
T  9924 aaaattacacttttagtttcttaacttaattttaggtaa 9962  T

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Target: scaffold0200 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 390 - 462
Target Start/End: Complemental strand, 4609 - 4537
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||||  |||||||  ||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  4609 atttcaatttgttcctttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttat 4537  T

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Target: scaffold0200; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 4358 - 4392
Alignment:
Q  329 ggtaaaattacacttttagttccttaactttattt 363  Q
    |||||||||||||||||||||||||||||| ||||    
T  4358 ggtaaaattacacttttagttccttaacttaattt 4392  T

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Target: scaffold0029 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 73440 - 73512
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||| ||||  ||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  73440 atttcaatttggtcttttttgtccattttcatatgaatttttaagcttaaaattcatgattttattttcttat 73512  T

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Target: scaffold0029; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 136919 - 136959
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  136919 aaaattacacaattagtcccttaactttattttaggtaaca 136959  T

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Target: scaffold0119 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 462
Target Start/End: Complemental strand, 41590 - 41454
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaacaatttaattctttatattattt------caattttgtccttttgatccatttacatatga 425  Q
    ||||||||| ||||||| ||||||||| |||| |  ||||| |||  |||||||| ||||||      ||||||  |||||||  | ||||| |||||||    
T  41590 aaaattacatttttagtcccttaacttaatttcacataacagtttggttctttatcttattttcatttcaatttgttcctttttgttcattttcatatga 41491  T
Q  426 atttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||||| |||||||||||||||||||||||||||    
T  41490 atttttaagcttaaaattcatgattttattttcttat 41454  T

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Target: scaffold0024 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 107924 - 107995
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||||||  ||||||| |||||||||||||||| || ||||||||||||||||||||||||    
T  107924 atttcaatttggtcctttttgtccattttcatatgaatttttaagctt-aaattcatgattttattttcttat 107995  T

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Target: scaffold0019 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 44937 - 45009
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||||||  ||||||| ||||||||||||||| |||||||||||| ||||| |||||||||    
T  44937 atttcaatttggtcctttttgtccattttcatatgaatttttaaatttaaaattcataatttttttttcttat 45009  T

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Target: scaffold0003 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 323494 - 323566
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||| ||||  ||||||| |||||||| ||||||| |||||||||||||||||||||||||||    
T  323494 atttcaatttggtcttttttgtccattttcatatgaaattttaagcttaaaattcatgattttattttcttat 323566  T

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Target: scaffold0592 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 390 - 462
Target Start/End: Original strand, 8455 - 8527
Alignment:
Q  390 atttcaattttgtccttttgatccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    |||||||||| ||||||||  ||||||| ||||| || ||||||  |||||||||||||||||||||||||||    
T  8455 atttcaatttggtcctttttgtccattttcatataaaattttaaaattaaaattcatgattttattttcttat 8527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 462
Target Start/End: Original strand, 257780 - 257831
Alignment:
Q  411 tccatttacatatgaatttttaagtttaaaattcatgattttattttcttat 462  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||||||    
T  257780 tccattttcatatgaatttttaagcttaaaattcataattttattttcttat 257831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 372
Target Start/End: Original strand, 330200 - 330240
Alignment:
Q  332 aaaattacacttttagttccttaactttattttaggtaaca 372  Q
    ||||||||||  ||||| |||||||||||||||||||||||    
T  330200 aaaattacacaattagtcccttaactttattttaggtaaca 330240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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