View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20646_high_4 (Length: 282)
Name: NF20646_high_4
Description: NF20646
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20646_high_4 |
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Alignment Details
Target: chr6 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 32343811 - 32343603
Alignment:
| Q |
1 |
cgtatatggtgcatatttgtataaagttgtgtaagtgaagtgtgttttactatagtcacatagattaatactgtcatggagatgaagttcattttggttg |
100 |
Q |
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| T |
32343811 |
cgtatatggtgcatatttgtataaagtggtgtaagtgaagtgtgttttactatagtcacatagattaatattgtcatggagatgaagttcattttggttg |
32343712 |
T |
|
| Q |
101 |
taggaatatgcttagtgttgggaatgtcccacaatgcatatggaaggaacttgaagaatgaaaaagaagatgtgaaaaagccggaatggttctttgatac |
200 |
Q |
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| T |
32343711 |
tggggatatgcttagtgttgggaatgtcccacaatgcatatggaaggaacttgaagaatgaaaaagaagatgtgaaaaagccggaatggttctttgatac |
32343612 |
T |
|
| Q |
201 |
accttctga |
209 |
Q |
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| T |
32343611 |
accatctga |
32343603 |
T |
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