View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20649_high_5 (Length: 266)

Name: NF20649_high_5
Description: NF20649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20649_high_5
NF20649_high_5
[»] chr5 (51 HSPs)
chr5 (68-207)||(17824869-17825009)
chr5 (58-195)||(16696639-16696776)
chr5 (4-61)||(8287832-8287889)
chr5 (1-56)||(15480587-15480642)
chr5 (1-67)||(18333455-18333521)
chr5 (1-58)||(27132992-27133049)
chr5 (1-56)||(9368623-9368678)
chr5 (1-56)||(25258095-25258150)
chr5 (1-56)||(25321885-25321940)
chr5 (1-56)||(41666758-41666813)
chr5 (1-56)||(41666994-41667049)
chr5 (1-55)||(24647724-24647778)
chr5 (1-58)||(8098345-8098402)
chr5 (1-58)||(29909720-29909777)
chr5 (1-58)||(42295607-42295664)
chr5 (1-49)||(7369752-7369800)
chr5 (2-58)||(21209920-21209976)
chr5 (1-53)||(29909491-29909543)
chr5 (1-56)||(12034718-12034773)
chr5 (1-56)||(13296920-13296975)
chr5 (1-56)||(21306915-21306970)
chr5 (1-56)||(21314753-21314808)
chr5 (1-56)||(24269872-24269927)
chr5 (1-56)||(24346502-24346557)
chr5 (1-56)||(24528568-24528623)
chr5 (3-56)||(18333700-18333753)
chr5 (1-58)||(24487644-24487701)
chr5 (1-61)||(60115-60175)
chr5 (2-58)||(21209707-21209763)
chr5 (1-56)||(8081114-8081169)
chr5 (1-56)||(13296701-13296755)
chr5 (1-56)||(15480350-15480405)
chr5 (205-236)||(17824652-17824683)
chr5 (1-56)||(20225069-20225124)
chr5 (2-37)||(24270125-24270160)
chr5 (2-37)||(24346757-24346792)
chr5 (1-56)||(24531627-24531682)
chr5 (1-56)||(28510119-28510174)
chr5 (1-56)||(33337456-33337511)
chr5 (2-56)||(9368859-9368913)
chr5 (1-38)||(95285-95322)
chr5 (1-38)||(170570-170607)
chr5 (7-56)||(2063735-2063784)
chr5 (1-38)||(7092177-7092214)
chr5 (3-56)||(7607624-7607677)
chr5 (1-38)||(12151930-12151967)
chr5 (1-58)||(19522115-19522172)
chr5 (9-38)||(25887611-25887640)
chr5 (12-56)||(9682317-9682361)
chr5 (2-38)||(17015898-17015934)
chr5 (3-59)||(19522350-19522406)
[»] chr4 (59 HSPs)
chr4 (1-62)||(53814669-53814730)
chr4 (2-58)||(20822002-20822058)
chr4 (1-58)||(21498823-21498880)
chr4 (1-56)||(5398477-5398532)
chr4 (3-66)||(12869020-12869083)
chr4 (3-58)||(14783186-14783241)
chr4 (1-56)||(22231074-22231129)
chr4 (1-56)||(22231309-22231364)
chr4 (1-56)||(22845448-22845503)
chr4 (1-56)||(28073182-28073237)
chr4 (1-56)||(40726749-40726804)
chr4 (1-58)||(9685660-9685717)
chr4 (1-58)||(21498382-21498439)
chr4 (1-58)||(28245525-28245582)
chr4 (4-56)||(25052883-25052935)
chr4 (1-56)||(1518192-1518247)
chr4 (13-56)||(2516239-2516282)
chr4 (1-52)||(6666205-6666256)
chr4 (1-56)||(21685026-21685081)
chr4 (1-56)||(22827566-22827621)
chr4 (1-56)||(22863502-22863557)
chr4 (1-56)||(35788687-35788742)
chr4 (1-56)||(35788922-35788977)
chr4 (1-56)||(35796743-35796798)
chr4 (1-56)||(37836108-37836163)
chr4 (1-56)||(39902564-39902619)
chr4 (1-56)||(50543331-50543386)
chr4 (1-56)||(50543568-50543623)
chr4 (1-56)||(53828524-53828579)
chr4 (5-59)||(2463838-2463892)
chr4 (1-58)||(9685426-9685483)
chr4 (3-56)||(11036512-11036565)
chr4 (1-58)||(16066093-16066150)
chr4 (3-56)||(52559597-52559650)
chr4 (1-58)||(53814928-53814985)
chr4 (1-56)||(400566-400621)
chr4 (5-56)||(6666636-6666687)
chr4 (1-52)||(11036751-11036802)
chr4 (1-56)||(12869264-12869319)
chr4 (1-56)||(22822378-22822433)
chr4 (1-56)||(40717442-40717497)
chr4 (13-56)||(50870482-50870525)
chr4 (3-37)||(4645672-4645706)
chr4 (1-47)||(5398222-5398268)
chr4 (2-56)||(52559833-52559887)
chr4 (1-62)||(2261748-2261809)
chr4 (1-58)||(5846174-5846231)
chr4 (3-56)||(6218469-6218522)
chr4 (1-38)||(22867147-22867184)
chr4 (1-38)||(24513158-24513195)
chr4 (3-56)||(28501618-28501671)
chr4 (1-34)||(35609734-35609767)
chr4 (1-34)||(52146088-52146121)
chr4 (1-37)||(12005489-12005525)
chr4 (1-37)||(21750062-21750098)
chr4 (1-33)||(27464272-27464304)
chr4 (2-38)||(30529945-30529981)
chr4 (6-62)||(31039342-31039397)
chr4 (1-37)||(44118879-44118915)
[»] chr6 (39 HSPs)
chr6 (1-58)||(27656486-27656543)
chr6 (2-56)||(19712981-19713035)
chr6 (1-58)||(8026417-8026474)
chr6 (1-58)||(8026632-8026689)
chr6 (1-58)||(15082143-15082200)
chr6 (1-58)||(27653245-27653302)
chr6 (1-58)||(27772742-27772799)
chr6 (1-58)||(30256840-30256897)
chr6 (1-56)||(4868578-4868633)
chr6 (1-56)||(4868814-4868869)
chr6 (1-56)||(6623411-6623466)
chr6 (1-56)||(17147661-17147716)
chr6 (1-56)||(33494567-33494622)
chr6 (3-56)||(5648673-5648726)
chr6 (1-58)||(12330178-12330235)
chr6 (1-58)||(27772974-27773031)
chr6 (1-48)||(3713261-3713308)
chr6 (1-56)||(8566960-8567015)
chr6 (1-56)||(9705282-9705337)
chr6 (1-56)||(11721933-11721988)
chr6 (1-56)||(13353229-13353284)
chr6 (1-56)||(13740944-13740999)
chr6 (1-56)||(13746444-13746499)
chr6 (7-58)||(15081907-15081958)
chr6 (1-56)||(25065095-25065150)
chr6 (1-56)||(33796354-33796409)
chr6 (1-55)||(5572386-5572440)
chr6 (3-56)||(9705050-9705103)
chr6 (1-58)||(12330290-12330347)
chr6 (1-58)||(21690750-21690807)
chr6 (1-38)||(28867976-28868013)
chr6 (2-53)||(16722811-16722862)
chr6 (1-56)||(19639114-19639169)
chr6 (1-56)||(30256606-30256661)
chr6 (2-56)||(11085610-11085664)
chr6 (1-56)||(19712742-19712799)
chr6 (1-38)||(2753286-2753323)
chr6 (7-56)||(3680046-3680095)
chr6 (3-56)||(6542710-6542763)
[»] chr8 (49 HSPs)
chr8 (3-59)||(4963384-4963440)
chr8 (1-55)||(4828321-4828375)
chr8 (2-52)||(16962251-16962301)
chr8 (1-58)||(19256585-19256642)
chr8 (1-58)||(24075305-24075362)
chr8 (1-56)||(39960220-39960275)
chr8 (1-56)||(42846606-42846661)
chr8 (1-55)||(26800514-26800568)
chr8 (1-58)||(4828096-4828153)
chr8 (1-58)||(17469846-17469903)
chr8 (1-58)||(17477093-17477150)
chr8 (1-58)||(19256819-19256876)
chr8 (1-56)||(422218-422273)
chr8 (1-56)||(5590369-5590424)
chr8 (1-56)||(6541943-6541998)
chr8 (1-56)||(10884093-10884147)
chr8 (1-56)||(11232195-11232250)
chr8 (1-56)||(11232430-11232485)
chr8 (2-37)||(15686060-15686095)
chr8 (1-56)||(27204992-27205047)
chr8 (1-56)||(27205090-27205145)
chr8 (1-56)||(27205188-27205243)
chr8 (1-56)||(35682782-35682837)
chr8 (1-56)||(37001492-37001547)
chr8 (1-56)||(38475775-38475830)
chr8 (9-56)||(38476074-38476121)
chr8 (1-56)||(38476305-38476360)
chr8 (1-56)||(39052930-39052985)
chr8 (1-56)||(39743557-39743612)
chr8 (8-58)||(34653185-34653235)
chr8 (1-62)||(8084390-8084451)
chr8 (3-56)||(12547128-12547181)
chr8 (3-56)||(24532422-24532475)
chr8 (3-56)||(26208013-26208066)
chr8 (1-38)||(38447446-38447483)
chr8 (4-56)||(8929048-8929100)
chr8 (1-37)||(34843145-34843181)
chr8 (1-53)||(37001254-37001306)
chr8 (1-52)||(5931954-5932005)
chr8 (1-52)||(5932189-5932240)
chr8 (3-58)||(7267464-7267519)
chr8 (1-56)||(12317074-12317129)
chr8 (1-56)||(22638180-22638235)
chr8 (1-52)||(37868588-37868639)
chr8 (1-56)||(41790687-41790741)
chr8 (1-38)||(3157578-3157615)
chr8 (19-56)||(10615440-10615477)
chr8 (1-61)||(10450028-10450088)
chr8 (1-61)||(10454454-10454514)
[»] chr3 (50 HSPs)
chr3 (1-56)||(8018996-8019051)
chr3 (1-56)||(16239619-16239674)
chr3 (7-58)||(20303384-20303435)
chr3 (1-58)||(11589813-11589870)
chr3 (1-58)||(13574920-13574977)
chr3 (4-56)||(33640076-33640128)
chr3 (1-56)||(1723077-1723132)
chr3 (1-52)||(23708229-23708280)
chr3 (1-52)||(23726685-23726736)
chr3 (1-52)||(23745141-23745192)
chr3 (1-52)||(24063666-24063717)
chr3 (1-56)||(24866225-24866280)
chr3 (1-56)||(31317256-31317311)
chr3 (1-56)||(35038195-35038250)
chr3 (1-56)||(54567920-54567975)
chr3 (2-56)||(16239856-16239910)
chr3 (1-59)||(50052537-50052595)
chr3 (3-56)||(7697399-7697452)
chr3 (1-58)||(9272989-9273046)
chr3 (1-58)||(11590033-11590090)
chr3 (1-58)||(20327848-20327905)
chr3 (5-53)||(472064-472112)
chr3 (3-55)||(13574686-13574738)
chr3 (1-56)||(4155352-4155407)
chr3 (1-52)||(20327619-20327670)
chr3 (1-56)||(22729128-22729183)
chr3 (1-52)||(23691429-23691480)
chr3 (1-56)||(34610589-34610644)
chr3 (1-56)||(45828047-45828102)
chr3 (2-56)||(12930129-12930183)
chr3 (1-38)||(20303083-20303120)
chr3 (1-38)||(39269359-39269396)
chr3 (1-52)||(13741106-13741157)
chr3 (1-56)||(17638262-17638317)
chr3 (3-34)||(28087238-28087269)
chr3 (1-56)||(37246668-37246723)
chr3 (1-56)||(39683268-39683323)
chr3 (1-56)||(45138972-45139027)
chr3 (1-56)||(54368544-54368599)
chr3 (1-55)||(33205493-33205547)
chr3 (7-52)||(389640-389685)
chr3 (1-58)||(6487332-6487389)
chr3 (1-58)||(8487512-8487569)
chr3 (3-56)||(26272325-26272378)
chr3 (3-56)||(31317496-31317549)
chr3 (16-56)||(8142648-8142688)
chr3 (1-53)||(18757870-18757922)
chr3 (4-36)||(21809168-21809200)
chr3 (4-56)||(45828277-45828329)
chr3 (1-56)||(50083081-50083137)
[»] chr1 (46 HSPs)
chr1 (1-56)||(41035828-41035883)
chr1 (1-58)||(25137302-25137359)
chr1 (1-58)||(51589020-51589077)
chr1 (1-58)||(51589254-51589311)
chr1 (1-58)||(51590066-51590123)
chr1 (3-58)||(3169796-3169851)
chr1 (1-56)||(4113007-4113062)
chr1 (1-56)||(12509493-12509548)
chr1 (1-56)||(17452680-17452735)
chr1 (1-56)||(40079180-40079235)
chr1 (2-56)||(25255340-25255394)
chr1 (3-56)||(17452829-17452882)
chr1 (1-58)||(51589834-51589891)
chr1 (1-58)||(52127748-52127805)
chr1 (1-40)||(12244979-12245018)
chr1 (1-56)||(15986334-15986389)
chr1 (1-56)||(27413375-27413430)
chr1 (1-56)||(31432231-31432286)
chr1 (1-56)||(35772057-35772112)
chr1 (1-52)||(38080632-38080683)
chr1 (1-56)||(52650772-52650827)
chr1 (2-56)||(8870911-8870965)
chr1 (2-56)||(43409835-43409889)
chr1 (4-61)||(26865354-26865411)
chr1 (8-56)||(4098164-4098212)
chr1 (5-56)||(7653508-7653559)
chr1 (1-56)||(12325561-12325616)
chr1 (1-56)||(25145721-25145776)
chr1 (1-56)||(31181514-31181569)
chr1 (1-56)||(33156761-33156816)
chr1 (5-56)||(35772296-35772347)
chr1 (1-56)||(40316051-40316106)
chr1 (1-56)||(42586440-42586495)
chr1 (2-56)||(7307750-7307804)
chr1 (2-56)||(29265982-29266036)
chr1 (2-56)||(38733180-38733234)
chr1 (10-56)||(51459706-51459752)
chr1 (1-55)||(52961610-52961664)
chr1 (1-38)||(856009-856046)
chr1 (3-56)||(4112541-4112594)
chr1 (3-56)||(25713423-25713476)
chr1 (1-38)||(39348371-39348408)
chr1 (1-37)||(2859647-2859683)
chr1 (5-37)||(3170033-3170065)
chr1 (12-56)||(26173457-26173501)
chr1 (1-37)||(26346988-26347024)
[»] chr7 (42 HSPs)
chr7 (1-58)||(34027421-34027478)
chr7 (1-56)||(21054954-21055009)
chr7 (1-56)||(21861322-21861377)
chr7 (1-56)||(25620164-25620219)
chr7 (1-56)||(32474528-32474583)
chr7 (1-58)||(29469633-29469690)
chr7 (1-58)||(40746293-40746350)
chr7 (1-58)||(48661554-48661611)
chr7 (1-56)||(41191042-41191097)
chr7 (1-56)||(47710471-47710526)
chr7 (1-56)||(47722127-47722182)
chr7 (1-52)||(48243066-48243117)
chr7 (8-58)||(31257266-31257316)
chr7 (2-56)||(36276992-36277046)
chr7 (1-58)||(2544446-2544503)
chr7 (2-55)||(3393011-3393064)
chr7 (1-58)||(29469868-29469925)
chr7 (3-56)||(31892417-31892470)
chr7 (3-56)||(40746034-40746087)
chr7 (4-56)||(5871576-5871628)
chr7 (2-58)||(17202208-17202264)
chr7 (1-56)||(1596622-1596676)
chr7 (1-56)||(1596856-1596911)
chr7 (1-56)||(3038085-3038140)
chr7 (1-56)||(6782889-6782944)
chr7 (1-52)||(11211684-11211735)
chr7 (1-56)||(26239917-26239972)
chr7 (3-58)||(26562072-26562127)
chr7 (1-56)||(31485660-31485715)
chr7 (1-56)||(34027655-34027710)
chr7 (1-56)||(40121925-40121980)
chr7 (3-37)||(2937997-2938031)
chr7 (1-55)||(23839079-23839133)
chr7 (3-37)||(33834448-33834482)
chr7 (2-56)||(36993075-36993129)
chr7 (1-58)||(10882005-10882061)
chr7 (7-56)||(21821840-21821889)
chr7 (1-38)||(32879633-32879670)
chr7 (3-56)||(33996312-33996365)
chr7 (1-38)||(47849599-47849636)
chr7 (5-54)||(48417518-48417567)
chr7 (1-37)||(10903113-10903149)
[»] chr2 (44 HSPs)
chr2 (1-62)||(16419530-16419591)
chr2 (1-58)||(19191609-19191666)
chr2 (1-62)||(40379204-40379265)
chr2 (3-62)||(25082532-25082591)
chr2 (1-56)||(29718356-29718411)
chr2 (1-56)||(40379445-40379500)
chr2 (1-58)||(2324268-2324325)
chr2 (4-56)||(31700746-31700798)
chr2 (1-56)||(2029797-2029852)
chr2 (1-56)||(2030032-2030087)
chr2 (1-60)||(2324502-2324561)
chr2 (1-56)||(5711440-5711495)
chr2 (1-56)||(14466411-14466466)
chr2 (1-56)||(16419295-16419350)
chr2 (1-56)||(17525100-17525155)
chr2 (1-56)||(17719428-17719483)
chr2 (7-58)||(17854691-17854742)
chr2 (1-56)||(28407794-28407849)
chr2 (1-56)||(40149004-40149059)
chr2 (1-56)||(21383285-21383342)
chr2 (2-56)||(27897607-27897661)
chr2 (1-58)||(5509107-5509164)
chr2 (1-58)||(5509341-5509398)
chr2 (1-34)||(17525361-17525394)
chr2 (1-58)||(17854928-17854985)
chr2 (1-38)||(32884135-32884172)
chr2 (3-52)||(36352164-36352213)
chr2 (3-52)||(37840367-37840416)
chr2 (3-55)||(5450492-5450544)
chr2 (1-56)||(5851682-5851738)
chr2 (4-56)||(21383671-21383723)
chr2 (1-40)||(11020586-11020625)
chr2 (5-56)||(17719598-17719649)
chr2 (1-56)||(24395891-24395946)
chr2 (8-58)||(15451448-15451498)
chr2 (2-56)||(19544372-19544426)
chr2 (2-56)||(31008572-31008626)
chr2 (3-61)||(37769939-37769997)
chr2 (3-56)||(5711676-5711729)
chr2 (3-56)||(10523049-10523102)
chr2 (3-56)||(10571000-10571053)
chr2 (7-47)||(9952094-9952134)
chr2 (1-57)||(13486362-13486418)
chr2 (1-61)||(19570970-19571030)
[»] scaffold0005 (2 HSPs)
scaffold0005 (3-58)||(56489-56544)
scaffold0005 (1-61)||(288653-288713)
[»] scaffold0400 (1 HSPs)
scaffold0400 (1-58)||(3873-3930)
[»] scaffold0365 (1 HSPs)
scaffold0365 (1-58)||(4517-4574)
[»] scaffold0766 (1 HSPs)
scaffold0766 (1-64)||(6302-6365)
[»] scaffold0519 (2 HSPs)
scaffold0519 (1-56)||(1944-1999)
scaffold0519 (1-56)||(2179-2234)
[»] scaffold0181 (1 HSPs)
scaffold0181 (1-56)||(20967-21022)
[»] scaffold0334 (1 HSPs)
scaffold0334 (1-38)||(4448-4485)
[»] scaffold0129 (1 HSPs)
scaffold0129 (3-56)||(14333-14386)
[»] scaffold0692 (2 HSPs)
scaffold0692 (1-56)||(5545-5600)
scaffold0692 (1-56)||(5755-5810)
[»] scaffold0481 (2 HSPs)
scaffold0481 (3-58)||(3470-3525)
scaffold0481 (1-61)||(3236-3296)
[»] scaffold0048 (2 HSPs)
scaffold0048 (10-61)||(82113-82164)
scaffold0048 (3-56)||(81872-81925)
[»] scaffold0024 (1 HSPs)
scaffold0024 (3-52)||(89558-89607)


Alignment Details
Target: chr5 (Bit Score: 77; Significance: 8e-36; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 68 - 207
Target Start/End: Complemental strand, 17825009 - 17824869
Alignment:
Q  68 atatagtacaatttgtagaaccttcttgttccttgtctacctttaattgttgttaaa-tcaaattggtctatcgcaaaggaaatggcgcatggactaatt 166  Q
    ||||||||||| || |||||| |||||||||| |||||||||| ||||||||||||| ||||||||||| |||||||||| ||||  ||||| |||||||    
T  17825009 atatagtacaaattttagaacattcttgttccctgtctaccttcaattgttgttaaaatcaaattggtcgatcgcaaagggaatgctgcatgaactaatt 17824910  T
Q  167 cgacatgtgcatatggataaccagaagaagcacagttccat 207  Q
    | |||||||| ||||| |||||||||||||| |||||||||    
T  17824909 ccacatgtgcctatggctaaccagaagaagcccagttccat 17824869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 16696639 - 16696776
Alignment:
Q  58 agtttgtataatatagtacaatttgtagaaccttcttgttccttgtctacctttaattgttgttaaatcaaattggtctatcgcaaaggaaatggcgcat 157  Q
    ||||||||||| |||||| || |||||||| |||||||||||||||||||||| || |||||| | |||||||||||| || || |||| ||||  ||||    
T  16696639 agtttgtataacatagtagaaattgtagaagcttcttgttccttgtctaccttcaactgttgtcatatcaaattggtcgattgcgaagggaatgctgcat 16696738  T
Q  158 ggactaattcgacatgtgcatatggataaccagaagaa 195  Q
    ||| |||||| || ||||| ||||| ||||||||||||    
T  16696739 ggattaattccacctgtgcctatggctaaccagaagaa 16696776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 8287832 - 8287889
Alignment:
Q  4 cacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatagtt 61  Q
    |||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||    
T  8287832 cacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaatagtt 8287889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15480587 - 15480642
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||||||||||||    
T  15480587 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaa 15480642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 18333521 - 18333455
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatagtttgtata 67  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||||| |||||| | ||||||||    
T  18333521 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaaattctaagaatttgtata 18333455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 27133049 - 27132992
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  27133049 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 27132992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9368623 - 9368678
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||    
T  9368623 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccataatttctaa 9368678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25258150 - 25258095
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  25258150 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 25258095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25321940 - 25321885
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  25321940 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 25321885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 41666813 - 41666758
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  41666813 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 41666758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 41667049 - 41666994
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  41667049 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 41666994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24647724 - 24647778
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttcta 55  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||| |||||||    
T  24647724 cctcacctcacaagccggttttgtggagttgtgttaggtccaaccacgatttcta 24647778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8098345 - 8098402
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| |||||||| | | |||||| ||||||||||    
T  8098345 cctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaata 8098402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 29909777 - 29909720
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||  |||||||||| | |||||| ||||||||||    
T  29909777 cctcacctcacaagccggttttgtggagttgtgttaggcccaaccaccatttctaata 29909720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 42295607 - 42295664
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||  |||||||||| | ||| |||||||||||||    
T  42295607 cctcacctcacaagccggttttgtggagttgtgttaggcccaacgacaatttctaata 42295664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7369752 - 7369800
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaa 49  Q
    ||||||||||||||||||||||||||| |||||||||| | ||||||||    
T  7369752 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaa 7369800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 21209976 - 21209920
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||||||||||||||||||| |||||||| | | |||||| ||||||||||    
T  21209976 ctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaata 21209920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 29909543 - 29909491
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttc 53  Q
    |||||||||||||  ||||||||||||||||||||||||| |||||| |||||    
T  29909543 cctcacctcacaaatcggttttgtgggattgtgttaggtctaaccaccatttc 29909491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12034718 - 12034773
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||| ||||||| ||||||||||||| | |||||| ||||||||    
T  12034718 cctcacctcacaagccagttttgtaggattgtgttaggcccaaccacgatttctaa 12034773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13296920 - 13296975
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||| |||||||||||||||||||||||  | |||||| ||||||||    
T  13296920 cctcacctcacaaaccggttttgtgggattgtgttagacccaaccacgatttctaa 13296975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21306915 - 21306970
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||| |||||||||||||||||  | |||||| ||||||||    
T  21306915 cctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaa 21306970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21314753 - 21314808
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||| |||||||||||||||||  | |||||| ||||||||    
T  21314753 cctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaa 21314808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24269927 - 24269872
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||||||| |||| ||||||||||   |||||||||||||||    
T  24269927 cctcacctcacaagccggttttatggggttgtgttaggctcaaccacaatttctaa 24269872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24346557 - 24346502
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||||||| |||| ||||||||||   |||||||||||||||    
T  24346557 cctcacctcacaagccggttttatggggttgtgttaggctcaaccacaatttctaa 24346502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24528568 - 24528623
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||  ||||||||    
T  24528568 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaa 24528623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 18333753 - 18333700
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||| |||||||||| | |||||| | ||||||    
T  18333753 tcacctcacaagccggttttgtggggttgtgttaggcccaaccacgaattctaa 18333700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24487701 - 24487644
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||| | |||||||| | | |||||| ||||||||||    
T  24487701 cctcacctcacaagccggttttgtgaggttgtgttaagcccaaccacgatttctaata 24487644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 60115 - 60175
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatagtt 61  Q
    ||||||||||||||||||||||||||| || ||||||  | || |||||||||||| ||||    
T  60115 cctcacctcacaagccggttttgtggggttatgttagacccaatcacaatttctaagagtt 60175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 21209763 - 21209707
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||||||||||||||||||| |||||||| |   |||||| ||||||||||    
T  21209763 ctcacctcacaagccggttttgtggggttgtgttaagcacaaccacgatttctaata 21209707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 8081169 - 8081114
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||| ||||||||||||||||||||| |||||||||| | |||||  ||||||||    
T  8081169 cctcatctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaa 8081114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13296701 - 13296755
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||| |||||||||| |||||||||| | |||||| ||||||||    
T  13296701 cctcacctcacaagccagttttgtggg-ttgtgttaggcccaaccacgatttctaa 13296755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15480350 - 15480405
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||| ||||||||||| || ||||||| | |||||| ||||||||    
T  15480350 cctcacctcacaagctggttttgtggggttctgttaggcccaaccacgatttctaa 15480405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 236
Target Start/End: Complemental strand, 17824683 - 17824652
Alignment:
Q  205 catcatgcttccaaattagaccttgaacaaac 236  Q
    ||||||||||||||||||||||||||||||||    
T  17824683 catcatgcttccaaattagaccttgaacaaac 17824652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20225069 - 20225124
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||| || ||||||||| |||||||||||  |||||| ||||||||    
T  20225069 cctcacctcacaagtcgattttgtggggttgtgttaggttcaaccacgatttctaa 20225124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 37
Target Start/End: Complemental strand, 24270160 - 24270125
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttag 37  Q
    |||||||||||||||||||||||||| |||||||||    
T  24270160 ctcacctcacaagccggttttgtggggttgtgttag 24270125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 37
Target Start/End: Complemental strand, 24346792 - 24346757
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttag 37  Q
    |||||||||||||||||||||||||| |||||||||    
T  24346792 ctcacctcacaagccggttttgtggggttgtgttag 24346757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24531627 - 24531682
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||| ||||||||| |||||||| | | |||||| ||||||||    
T  24531627 cctcacctcacaagccgattttgtggggttgtgttatgcccaaccacgatttctaa 24531682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28510119 - 28510174
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||| |||| |||||||||||||||| |||||||||| | |||||| ||||||||    
T  28510119 cctcatctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaa 28510174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33337511 - 33337456
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||| ||||||| ||||||||||||| |||||||||||  |||||| ||||||||    
T  33337511 cctcatctcacaaaccggttttgtggggttgtgttaggttcaaccacgatttctaa 33337456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 9368859 - 9368913
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||| |||||||||| || |||||| |||||||||| | |||||||||||||||    
T  9368859 ctcacttcacaagccgattatgtggggttgtgttaggcccaaccacaatttctaa 9368913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 95322 - 95285
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttagg 38  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  95322 cctcatctcacaagccggttttgtggggttgtgttagg 95285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 170607 - 170570
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttagg 38  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  170607 cctcacctcacaagccggttttgtgaggttgtgttagg 170570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 2063784 - 2063735
Alignment:
Q  7 ctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||| |||||||||||| |||||||||| | |||||| ||||||||    
T  2063784 ctcacaagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 2063735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 7092177 - 7092214
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttagg 38  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  7092177 cctcacctcacaagccagttttgtggggttgtgttagg 7092214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 7607624 - 7607677
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||  |||||||||| | |||||  ||||||||    
T  7607624 tcacctcacaagccggttttgtggagttgtgttaggcccaaccatgatttctaa 7607677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 12151967 - 12151930
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttagg 38  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  12151967 cctcacctcacaagccggttttgtgaggttgtgttagg 12151930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19522115 - 19522172
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| |||| || |  | |||||| ||||||||||    
T  19522115 cctcacctcacaagccggttttgtggggttgtatttgacccaaccacgatttctaata 19522172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 25887611 - 25887640
Alignment:
Q  9 cacaagccggttttgtgggattgtgttagg 38  Q
    ||||||||||||||||||||||||||||||    
T  25887611 cacaagccggttttgtgggattgtgttagg 25887640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 9682361 - 9682317
Alignment:
Q  12 aagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||| | |||||||||||| |||||||| ||||||    
T  9682361 aagccggttttgtgaggttgtgttaggtccaaccacaaattctaa 9682317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 17015934 - 17015898
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttagg 38  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  17015934 ctcacctcacaagccgattttgtggggttgtgttagg 17015898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 19522350 - 19522406
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatag 59  Q
    ||||||||||||||| ||||||||| |||||||||    |||||| |||||||||||    
T  19522350 tcacctcacaagccgattttgtggggttgtgttagacacaaccacgatttctaatag 19522406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 53814730 - 53814669
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatagttt 62  Q
    |||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||||||    
T  53814730 cctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaatagttt 53814669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 20822002 - 20822058
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||||||||||||| | |||||| ||||||||||    
T  20822002 ctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaata 20822058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21498823 - 21498880
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  21498823 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 21498880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5398532 - 5398477
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||  ||||||||    
T  5398532 cctcacctcacaagccggttttgtggggttgtgttaggtccaaccatgatttctaa 5398477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 12869083 - 12869020
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatagtttgtat 66  Q
    ||||||||||||||||||||||||| ||||||||||  |||| || |||||||| |||||||||    
T  12869083 tcacctcacaagccggttttgtggggttgtgttaggctaaactacgatttctaagagtttgtat 12869020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 14783241 - 14783186
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  14783241 tcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 14783186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22231129 - 22231074
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||| ||||||| |||||| ||||||||    
T  22231129 cctcacctcacaagccggttttgtggggttgtattaggtccaaccacgatttctaa 22231074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22231364 - 22231309
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  22231364 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 22231309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22845503 - 22845448
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  22845503 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 22845448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28073237 - 28073182
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||| ||||||||||| |||||||||| | |||||||||||||||    
T  28073237 cctcacctcacaagctggttttgtggggttgtgttaggcccaaccacaatttctaa 28073182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40726749 - 40726804
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||| ||||||||    
T  40726749 cctcacctcacaagccggttttgtaggattgtgttaggcccaaccacgatttctaa 40726804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9685660 - 9685717
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||||||||||||||| |||| |||||||||| | |||||| ||||||||||    
T  9685660 cctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaata 9685717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21498382 - 21498439
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| || ||||||| | |||||| ||||||||||    
T  21498382 cctcacctcacaagccggttttgtggggttatgttaggcccaaccacgatttctaata 21498439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 28245582 - 28245525
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| |||||||||| | ||| || ||||||||||    
T  28245582 cctcacctcacaagccggttttgtggggttgtgttaggcccaactacgatttctaata 28245525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 25052883 - 25052935
Alignment:
Q  4 cacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  25052883 cacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 25052935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1518192 - 1518247
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||| ||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  1518192 cctcagctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaa 1518247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 2516239 - 2516282
Alignment:
Q  13 agccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||| |||||||||||| |||||||||||||||    
T  2516239 agccggttttgtggggttgtgttaggtccaaccacaatttctaa 2516282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 6666256 - 6666205
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaattt 52  Q
    ||||||||||||| | ||||||||||| ||||||||| ||||||||||||||    
T  6666256 cctcacctcacaaacaggttttgtggggttgtgttagatcaaaccacaattt 6666205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21685026 - 21685081
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||| ||||||||| |||||||| | | |||||||||||||||    
T  21685026 cctcacctcacaagccgattttgtggggttgtgttaagcccaaccacaatttctaa 21685081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22827566 - 22827621
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||||||||| || |||||||||| | |||||| ||||||||    
T  22827566 cctcacctcacaagccggttttgtcgggttgtgttaggcccaaccacgatttctaa 22827621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22863502 - 22863557
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||| ||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  22863502 cctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 22863557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 35788687 - 35788742
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||||||| |||| |||||||||| | |||||| ||||||||    
T  35788687 cctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaa 35788742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 35788922 - 35788977
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||| ||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  35788922 cctcatctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 35788977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35796798 - 35796743
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||| | |||||||| ||| |||||| ||||||||    
T  35796798 cctcacctcacaagccggttttgtgaggttgtgttaagtccaaccaccatttctaa 35796743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37836108 - 37836163
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||| ||| |||||||||||||||||| |||||||||| | |||||||||||||||    
T  37836108 cctctccttacaagccggttttgtggggttgtgttaggcctaaccacaatttctaa 37836163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 39902619 - 39902564
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||| ||||||||||| |||||||||| | |||||| ||||||||    
T  39902619 cctcacctcacaagctggttttgtggggttgtgttaggcccaaccaccatttctaa 39902564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 50543386 - 50543331
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||| ||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  50543386 cctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 50543331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 50543623 - 50543568
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||  |||||||||| | |||||| ||||||||    
T  50543623 cctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaa 50543568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 53828579 - 53828524
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||| |||||| ||||||||| |||||||||| | |||||||||||||||    
T  53828579 cctcacctcataagccgattttgtggggttgtgttaggcccaaccacaatttctaa 53828524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 2463838 - 2463892
Alignment:
Q  5 acctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatag 59  Q
    ||||||||||||||||||||||| |||||||||| | | |||| |||||||||||    
T  2463838 acctcacaagccggttttgtggggttgtgttaggcccagccaccatttctaatag 2463892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9685426 - 9685483
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||||||| |||||||||| | |||||||||| | |||||| ||||||||||    
T  9685426 cctcacctcacaagtcggttttgtgaggttgtgttaggcccaaccacgatttctaata 9685483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 11036565 - 11036512
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||| ||| |||||||||  | |||||||||||||||    
T  11036565 tcacctcacaagccggttttgcggggttgtgttagacccaaccacaatttctaa 11036512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16066093 - 16066150
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||| | |||||||| ||||||||||||| | |||||| ||||||||||    
T  16066093 cctcacctcacaaactggttttgtaggattgtgttaggcccaaccaccatttctaata 16066150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 52559597 - 52559650
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||| |||||||||| | |||||  ||||||||    
T  52559597 tcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaa 52559650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 53814985 - 53814928
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||||||| |||||||||||| |||||||| | | |||||| ||||||||||    
T  53814985 cctcacctcacaagtcggttttgtggggttgtgttaagcccaaccacgatttctaata 53814928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 400621 - 400566
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||| | |||||||| |   |||||||||||||||    
T  400621 cctcacctcacaagccggttttgtgaggttgtgttaagctcaaccacaatttctaa 400566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 6666687 - 6666636
Alignment:
Q  5 acctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||| |||||||||||||||||| ||||| | |||||| ||||||||    
T  6666687 acctcacaaaccggttttgtgggattgttttaggcccaaccacgatttctaa 6666636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11036802 - 11036751
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaattt 52  Q
    ||||||||||||||||| || |||||| |||||||||| | |||||||||||    
T  11036802 cctcacctcacaagccgattgtgtggggttgtgttaggcctaaccacaattt 11036751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12869319 - 12869264
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||| ||| |||||||||||| |||||||||| | |||||| ||||||||    
T  12869319 cctcacctcataagacggttttgtggggttgtgttaggcccaaccacgatttctaa 12869264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22822378 - 22822433
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||| ||||||||||||||||| | |||| ||||||| |||||||| ||||||    
T  22822378 cctcaccacacaagccggttttgtgcggttgtattaggtccaaccacaaattctaa 22822433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40717497 - 40717442
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||| ||| |||||||||||| |||||||||| | |||||| ||||||||    
T  40717497 cctcacctcaaaagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 40717442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 50870525 - 50870482
Alignment:
Q  13 agccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||| ||||||||| |||||||||||| |||||||||||||||    
T  50870525 agccgattttgtggggttgtgttaggtccaaccacaatttctaa 50870482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 4645672 - 4645706
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttag 37  Q
    |||||| ||||||||||||||||||||||||||||    
T  4645672 tcaccttacaagccggttttgtgggattgtgttag 4645706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 5398268 - 5398222
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccac 47  Q
    ||||| ||||||||||||||||||||| |||||||||| | ||||||    
T  5398268 cctcatctcacaagccggttttgtggggttgtgttaggcccaaccac 5398222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 52559833 - 52559887
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||| ||||||| ||||| | |||||  ||||||||    
T  52559833 ctcacctcacaagccggttttgtaggattgtattaggcccaaccatgatttctaa 52559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2261809 - 2261748
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatagttt 62  Q
    ||||||||||||  || |||||||||| |||||||| ||  |||||| ||||||||||||||    
T  2261809 cctcacctcacagaccagttttgtggggttgtgttaagttcaaccaccatttctaatagttt 2261748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5846174 - 5846231
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||| |||||||||||||||| ||| ||||||   |||||| ||||||||||    
T  5846174 cctcacctcataagccggttttgtggggttgcgttaggctcaaccacgatttctaata 5846231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 6218469 - 6218522
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||||| ||| |||||||||||   |||||| ||||||||    
T  6218469 tcacctcacaagccggttttatggaattgtgttaggctcaaccacgatttctaa 6218522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 22867147 - 22867184
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttagg 38  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  22867147 cctcaccttacaagccggttttgtggggttgtgttagg 22867184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 24513195 - 24513158
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttagg 38  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  24513195 cctcacctcagaagccagttttgtgggattgtgttagg 24513158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 28501618 - 28501671
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||| | | |||||||| | |||||||||| ||||    
T  28501618 tcacctcacaagccggttttgtgaggtcgtgttaggcctaaccacaattcctaa 28501671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 35609767 - 35609734
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgt 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  35609767 cctcacctcacaagccggttttgtggggttgtgt 35609734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 52146121 - 52146088
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgt 34  Q
    ||||||||||||||||||||||||||| ||||||    
T  52146121 cctcacctcacaagccggttttgtggggttgtgt 52146088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 12005525 - 12005489
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttag 37  Q
    ||||||||||||||||||||||||| | |||||||||    
T  12005525 cctcacctcacaagccggttttgtgaggttgtgttag 12005489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 21750098 - 21750062
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttag 37  Q
    ||||||||||||||||||||||||||| || ||||||    
T  21750098 cctcacctcacaagccggttttgtggggttatgttag 21750062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 27464304 - 27464272
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtg 33  Q
    ||||||||||||||||||||||||||| |||||    
T  27464304 cctcacctcacaagccggttttgtggggttgtg 27464272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 30529981 - 30529945
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttagg 38  Q
    ||||||||||||||||||||| || ||||||||||||    
T  30529981 ctcacctcacaagccggttttatgagattgtgttagg 30529945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 62
Target Start/End: Complemental strand, 31039397 - 31039342
Alignment:
Q  6 cctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatagttt 62  Q
    ||||||||| |||||||||||  |||||||||| | ||||||||||||||| |||||    
T  31039397 cctcacaagtcggttttgtggagttgtgttagg-ccaaccacaatttctaagagttt 31039342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 44118915 - 44118879
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttag 37  Q
    |||||||||||||||| |||||||||| |||||||||    
T  44118915 cctcacctcacaagcccgttttgtggggttgtgttag 44118879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27656486 - 27656543
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||    
T  27656486 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaata 27656543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 19712981 - 19713035
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||||||||||||| | |||||| ||||||||    
T  19712981 ctcacctcacaagccggttttgtgggattgtgttaggcccaaccaccatttctaa 19713035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8026417 - 8026474
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  8026417 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 8026474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 8026632 - 8026689
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  8026632 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 8026689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15082200 - 15082143
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||||||||||||||||||||||||||||||| | || ||| ||||||||||    
T  15082200 cctcacctcacaagccggttttgtgggattgtgttaggcccaaacacgatttctaata 15082143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27653245 - 27653302
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||||||| ||||||||||||||||||||||| | |||||| ||||||||||    
T  27653245 cctcacctcacaagtcggttttgtgggattgtgttaggcccaaccacgatttctaata 27653302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27772742 - 27772799
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||| ||||||||||    
T  27772742 cctcacctcacaagccggttttgtggagttgtgttaggtccaaccacgatttctaata 27772799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 30256840 - 30256897
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  30256840 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 30256897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4868633 - 4868578
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  4868633 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 4868578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4868869 - 4868814
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  4868869 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 4868814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6623466 - 6623411
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||| |||||||||||||||||| |||||||||||| |||||| ||||||||    
T  6623466 cctcaccttacaagccggttttgtggggttgtgttaggtccaaccacgatttctaa 6623411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17147716 - 17147661
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| || ||||||||| |||||| ||||||||    
T  17147716 cctcacctcacaagccggttttgtggggttatgttaggtccaaccaccatttctaa 17147661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33494567 - 33494622
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  33494567 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaa 33494622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 5648726 - 5648673
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||| | |||||||||||| ||||| |||||||||    
T  5648726 tcacctcacaagccggttttgtgaggttgtgttaggtccaaccataatttctaa 5648673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12330235 - 12330178
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||| | |||||||||| | |||||| ||||||||||    
T  12330235 cctcacctcacaagccggttttgtgaggttgtgttaggcccaaccacgatttctaata 12330178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 27772974 - 27773031
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||| |||||||||||||||||||| | | ||||| |||||||||||    
T  27772974 cctcacctcacaagctggttttgtgggattgtgttaagcccaaccataatttctaata 27773031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 3713261 - 3713308
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccaca 48  Q
    |||||||| |||| |||||||||||||||||||||||||| |||||||    
T  3713261 cctcaccttacaaaccggttttgtgggattgtgttaggtctaaccaca 3713308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 8567015 - 8566960
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||| ||||||||||||| |||||||||| | |||||| ||||||||    
T  8567015 cctcacctcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaa 8566960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9705282 - 9705337
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||  | |||||| ||||||||    
T  9705282 cctcacctcacaagccggttttgtggggttgtgttagacccaaccacgatttctaa 9705337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11721933 - 11721988
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||| |||||||||||||||| |||||||||| | |||||| ||||||||    
T  11721933 cctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaa 11721988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13353229 - 13353284
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||| |||||||||||||||||| |||||||||| | |||||| ||||||||    
T  13353229 cctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaa 13353284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13740944 - 13740999
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||| ||||||| |||||||||||| |||||||||| | |||||||||||||||    
T  13740944 cctcacttcacaagtcggttttgtggggttgtgttaggcccaaccacaatttctaa 13740999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13746444 - 13746499
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||| ||||||| |||||||||||| |||||||||| | |||||||||||||||    
T  13746444 cctcacttcacaagtcggttttgtggggttgtgttaggcccaaccacaatttctaa 13746499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 15081958 - 15081907
Alignment:
Q  7 ctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||||||||||||||||||||||||| | || ||| ||||||||||    
T  15081958 ctcacaagccggttttgtgggattgtgttaggcccaaacacgatttctaata 15081907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25065150 - 25065095
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | ||| || ||||||||    
T  25065150 cctcacctcacaagccggttttgtggggttgtgttaggcccaactacgatttctaa 25065095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33796354 - 33796409
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||| |||||||||||||||||| |||||||||| | |||||| ||||||||    
T  33796354 cctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaa 33796409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5572440 - 5572386
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttcta 55  Q
    |||||||||||||| |||||||||||| |||||||||| | |||||| |||||||    
T  5572440 cctcacctcacaagtcggttttgtggggttgtgttaggcccaaccacgatttcta 5572386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 9705050 - 9705103
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||| |||||||||||| |||||||||| | |||||| ||||||||    
T  9705050 tcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaa 9705103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 12330347 - 12330290
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||| ||||||||||||||||||| | |||||||||| | |||||| ||||||||||    
T  12330347 cctcatctcacaagccggttttgtgaggttgtgttaggcccaaccacgatttctaata 12330290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 21690750 - 21690807
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||| ||||||||| ||||||||||   |||||| ||||||||||    
T  21690750 cctcacctcacaagccgattttgtggggttgtgttaggctcaaccacgatttctaata 21690807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28868013 - 28867976
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttagg 38  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  28868013 cctcacctcacaagccggttttgtggggttgtgttagg 28867976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 16722862 - 16722811
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttc 53  Q
    |||||||||||||||| ||||||||| |||||||||| | |||||| |||||    
T  16722862 ctcacctcacaagccgattttgtggggttgtgttaggcccaaccactatttc 16722811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19639169 - 19639114
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||| ||||||| |||||  ||||||||||| |||||| ||||||||    
T  19639169 cctcacctcacaaaccggtttagtggggctgtgttaggtccaaccacgatttctaa 19639114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 30256606 - 30256661
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||| ||||||| ||||||||||||| |||||||||| | |||||| ||||||||    
T  30256606 cctcaactcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaa 30256661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 11085610 - 11085664
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||| |||||||||||||||||| | |||||||||||| || ||| ||||||||    
T  11085610 ctcacttcacaagccggttttgtgcggttgtgttaggtccaatcacgatttctaa 11085664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19712742 - 19712799
Alignment:
Q  1 cctcacctcacaagccggttttgtgggat--tgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |  ||||||||| | |||||| ||||||||    
T  19712742 cctcacctcacaagccggttttgtggggttgtgtgttaggcccaaccaccatttctaa 19712799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 2753286 - 2753323
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttagg 38  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  2753286 cctcacctcacaaggcggttttgtggggttgtgttagg 2753323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 3680046 - 3680095
Alignment:
Q  7 ctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||| || ||||||||| |||||||||| | |||||||||||||||    
T  3680046 ctcacaagtcgattttgtggggttgtgttaggcccaaccacaatttctaa 3680095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 6542763 - 6542710
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||| |||||||||| || |||||||| ||| |||||| ||||||||    
T  6542763 tcacctcacaaaccggttttgtagggttgtgttaagtccaaccacgatttctaa 6542710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 4963384 - 4963440
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatag 59  Q
    ||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  4963384 tcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaatag 4963440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4828321 - 4828375
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttcta 55  Q
    ||||||||||||||||||||||||||| |||||||||| | ||||||||||||||    
T  4828321 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttcta 4828375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 16962301 - 16962251
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaattt 52  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  16962301 ctcacctcacaaaccggttttgtgggattgtgttaggtccaaccacaattt 16962251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 19256642 - 19256585
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  19256642 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 19256585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24075362 - 24075305
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  24075362 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 24075305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39960220 - 39960275
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  39960220 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 39960275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42846661 - 42846606
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  42846661 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 42846606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 26800568 - 26800514
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttcta 55  Q
    ||||||| ||||||||||||||||||| |||||||||| | ||||||||||||||    
T  26800568 cctcaccacacaagccggttttgtggggttgtgttaggcccaaccacaatttcta 26800514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4828096 - 4828153
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| || |||||||    
T  4828096 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatctctaata 4828153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17469846 - 17469903
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| ||||||||||   |||||| ||||||||||    
T  17469846 cctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaata 17469903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17477093 - 17477150
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| ||||||||||   |||||| ||||||||||    
T  17477093 cctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaata 17477150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 19256876 - 19256819
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||| ||||||||||| |||||||||| | |||||| ||||||||||    
T  19256876 cctcacctcacaagcaggttttgtggggttgtgttaggcccaaccacgatttctaata 19256819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 422273 - 422218
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||| |||||||||| || ||||||| |||||||| ||||||||    
T  422273 cctcacctcacaagccagttttgtggggttatgttaggccaaaccacgatttctaa 422218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5590424 - 5590369
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||| |||||||||||||||||| | |||||||||| | |||||||||||||||    
T  5590424 cctcacttcacaagccggttttgtgaggttgtgttaggcccaaccacaatttctaa 5590369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6541943 - 6541998
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||| ||| ||||||    
T  6541943 cctcacctcacaagccggttttgtgggtttgtgttaggcccaaccgcaaattctaa 6541998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10884093 - 10884147
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  10884093 cctcacctcacaagccggttttgtggg-ttgtgttaggcccaaccacgatttctaa 10884147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11232250 - 11232195
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||| |||||||||||||||||| |||||||||| | |||||| ||||||||    
T  11232250 cctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaa 11232195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11232485 - 11232430
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||| |||||||||||||||||| |||||||||| | |||||| ||||||||    
T  11232485 cctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaa 11232430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 37
Target Start/End: Complemental strand, 15686095 - 15686060
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttag 37  Q
    ||||||||||||||||||||||||||||||||||||    
T  15686095 ctcacctcacaagccggttttgtgggattgtgttag 15686060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27204992 - 27205047
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||| |||||||||||||||| |||||||||| | |||||| ||||||||    
T  27204992 cctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaa 27205047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27205090 - 27205145
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||| |||||||||||||||| |||||||||| | |||||| ||||||||    
T  27205090 cctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaa 27205145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27205188 - 27205243
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||| |||||||||||||||| |||||||||| | |||||| ||||||||    
T  27205188 cctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaa 27205243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35682837 - 35682782
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||| ||||||||||||||||| |||||||||| | |||||| ||||||||    
T  35682837 cctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 35682782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37001492 - 37001547
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||| |||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  37001492 cctcacatcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 37001547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 38475775 - 38475830
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||||||||| || |||||||||| | |||||||| ||||||    
T  38475775 cctcacctcacaagccggttttgtagggttgtgttaggcccaaccacaaattctaa 38475830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 38476074 - 38476121
Alignment:
Q  9 cacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||||||| ||||||| | |||||||||||||||    
T  38476074 cacaagccggttttgtgggattatgttaggcccaaccacaatttctaa 38476121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 38476305 - 38476360
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||| ||||||||| |||||||||| | |||||||| ||||||    
T  38476305 cctcacctcacaagccgattttgtggggttgtgttaggactaaccacaaattctaa 38476360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 39052985 - 39052930
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | ||| || ||||||||    
T  39052985 cctcacctcacaagccggttttgtggggttgtgttaggcccaacaacgatttctaa 39052930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39743557 - 39743612
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||| ||||||||| |||||||||| | |||||| ||||||||    
T  39743557 cctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttctaa 39743612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 34653185 - 34653235
Alignment:
Q  8 tcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  34653185 tcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 34653235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 8084390 - 8084451
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatagttt 62  Q
    ||||||||||||| || |||||||| | |||||||||||| |||||| |||||||| |||||    
T  8084390 cctcacctcacaaaccagttttgtgaggttgtgttaggtccaaccacgatttctaagagttt 8084451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 12547128 - 12547181
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||| |||||||||| | ||| || ||||||||    
T  12547128 tcacctcacaagccggttttgtggggttgtgttaggcccaactacgatttctaa 12547181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 24532475 - 24532422
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||| |||||||||| | |||||  ||||||||    
T  24532475 tcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaa 24532422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 26208066 - 26208013
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||| |||||||||||||||| || ||||||| | |||||||||||||||    
T  26208066 tcacctcataagccggttttgtggggttatgttaggcccaaccacaatttctaa 26208013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 38447483 - 38447446
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttagg 38  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  38447483 cctcacctcacaagccggttttgtggggttgtgttagg 38447446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 8929048 - 8929100
Alignment:
Q  4 cacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||||||||| |||||||||| | |||||| | ||||||    
T  8929048 cacctcacaagccggttttgtggggttgtgttaggcccaaccacgaattctaa 8929100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 34843145 - 34843181
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttag 37  Q
    ||||||||||||||||||||||||||| |||||||||    
T  34843145 cctcacctcacaagccggttttgtggggttgtgttag 34843181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37001254 - 37001306
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttc 53  Q
    ||||||||||||||||||||||||||  |||||||||| | |||||| |||||    
T  37001254 cctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttc 37001306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 5932005 - 5931954
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaattt 52  Q
    ||||||||||||||||||||||||||| || ||||||| | |||||| ||||    
T  5932005 cctcacctcacaagccggttttgtggggttatgttaggcccaaccaccattt 5931954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 5932240 - 5932189
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaattt 52  Q
    |||||||||||||||| |||||||||| |||||||||| | |||||| ||||    
T  5932240 cctcacctcacaagcctgttttgtggggttgtgttaggcccaaccaccattt 5932189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 7267519 - 7267464
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||||||||||||||| || |||||||||  | |||||| ||||||||||    
T  7267519 tcacctcacaagccggttttgtagggttgtgttagacccaaccaccatttctaata 7267464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12317074 - 12317129
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||| |||| | |||||||||||||||||||| | |||||| ||||||||    
T  12317074 cctcacctcataagctgattttgtgggattgtgttaggcccaaccacgatttctaa 12317129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22638235 - 22638180
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||| ||||||||||||||||||| |||||||| | | |||||| ||||||||    
T  22638235 cctcaccacacaagccggttttgtggggttgtgttaagcccaaccacgatttctaa 22638180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 37868639 - 37868588
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaattt 52  Q
    ||||||||||||||| |||||||||| ||||||||||| | |||||| ||||    
T  37868639 cctcacctcacaagctggttttgtggaattgtgttaggcctaaccacgattt 37868588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 41790687 - 41790741
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||| |||||||||||||||| |||||||||| | |||||| ||||||||    
T  41790687 cctcacctcataagccggttttgtggg-ttgtgttaggcccaaccacgatttctaa 41790741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 3157615 - 3157578
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttagg 38  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  3157615 cctcacctcacaagccagttttgtggggttgtgttagg 3157578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 10615440 - 10615477
Alignment:
Q  19 ttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||| |||||||||||||||||| |||||||||    
T  10615440 ttttgtggggttgtgttaggtcaaaccataatttctaa 10615477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10450028 - 10450088
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatagtt 61  Q
    |||||||||| ||||||||||||| || ||||||||||   |||||| |||||||| ||||    
T  10450028 cctcacctcagaagccggttttgtagggttgtgttaggctcaaccacgatttctaagagtt 10450088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10454454 - 10454514
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatagtt 61  Q
    |||||||||| ||||||||||||| || ||||||||||   |||||| |||||||| ||||    
T  10454454 cctcacctcagaagccggttttgtagggttgtgttaggctcaaccacgatttctaagagtt 10454514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8018996 - 8019051
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||||||||||||    
T  8018996 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaatttctaa 8019051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16239619 - 16239674
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||||||||||||||||||||||| | |||||| ||||||||    
T  16239619 cctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaa 16239674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 20303435 - 20303384
Alignment:
Q  7 ctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  20303435 ctcacaagccggttttgtggggttgtgttaggtccaaccacaatttctaata 20303384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11589813 - 11589870
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  11589813 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 11589870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 13574977 - 13574920
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||||||||| |||||||||| |||||||||| | |||||||||||||||||    
T  13574977 cctcacctcacaagccagttttgtggggttgtgttaggcccaaccacaatttctaata 13574920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 33640076 - 33640128
Alignment:
Q  4 cacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||||||||||| | || ||||||||||||    
T  33640076 cacctcacaagccggttttgtgggattgtgttaggcccaatcacaatttctaa 33640128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1723132 - 1723077
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  1723132 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 1723077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 23708280 - 23708229
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaattt 52  Q
    ||||||||||||||||||||||||| |||||||||||||| || ||||||||    
T  23708280 cctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaattt 23708229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 23726736 - 23726685
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaattt 52  Q
    ||||||||||||||||||||||||| |||||||||||||| || ||||||||    
T  23726736 cctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaattt 23726685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 23745192 - 23745141
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaattt 52  Q
    ||||||||||||||||||||||||| |||||||||||||| || ||||||||    
T  23745192 cctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaattt 23745141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 24063717 - 24063666
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaattt 52  Q
    ||||||||||||||||||||||||| |||||||||||||| || ||||||||    
T  24063717 cctcacctcacaagccggttttgtgagattgtgttaggtccaatcacaattt 24063666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24866225 - 24866280
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  24866225 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 24866280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31317256 - 31317311
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||||||||||||||   |||||| ||||||||    
T  31317256 cctcacctcacaagccggttttgtgggattgtgttaggctcaaccacgatttctaa 31317311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 35038250 - 35038195
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  35038250 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 35038195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 54567920 - 54567975
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  54567920 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 54567975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 16239856 - 16239910
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||| |||||||||||| |||||||||||| || ||||||||||||    
T  16239856 ctcacctcacaagtcggttttgtggggttgtgttaggtccaagcacaatttctaa 16239910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 50052595 - 50052537
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatag 59  Q
    |||||| |||||||||||||||||||| |||||||||| | |||||| |||||||||||    
T  50052595 cctcacttcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatag 50052537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 7697452 - 7697399
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||| ||||||||||| |||||||||| | |||||||||||||||    
T  7697452 tcacctcacaagctggttttgtggggttgtgttaggcctaaccacaatttctaa 7697399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9272989 - 9273046
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| |||||||| | | |||||| ||||||||||    
T  9272989 cctcacctcacaagccggttttgtggggttgtgttaagcccaaccaccatttctaata 9273046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 11590033 - 11590090
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||||||||||||||| ||||||||| ||||| | |||||||| ||||||||    
T  11590033 cctcacctcacaagccggttttatgggattgtattaggcccaaccacaacttctaata 11590090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20327905 - 20327848
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||  ||||||||||    
T  20327905 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaata 20327848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 472112 - 472064
Alignment:
Q  5 acctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttc 53  Q
    ||||||||||||||||||||||| |||||||||| |||||||| |||||    
T  472112 acctcacaagccggttttgtggggttgtgttaggccaaaccacgatttc 472064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 13574738 - 13574686
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttcta 55  Q
    ||||||||||||||||||||||||| |||||||||| | |||||| |||||||    
T  13574738 tcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttcta 13574686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4155352 - 4155407
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||| |||||||||||||||| |||||||||| | |||||| ||||||||    
T  4155352 cctcacctcaaaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 4155407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 20327670 - 20327619
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaattt 52  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||    
T  20327670 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 20327619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22729128 - 22729183
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||| |||||||||||||||||| | |||||||||| | |||||||||||||||    
T  22729128 cctcacttcacaagccggttttgtgaggttgtgttaggcccaaccacaatttctaa 22729183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 23691480 - 23691429
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaattt 52  Q
    |||||||||||||||||| |||||| |||||||||||||| || ||||||||    
T  23691480 cctcacctcacaagccggatttgtgagattgtgttaggtccaatcacaattt 23691429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34610589 - 34610644
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||| |||||||||||| |||||||||  | |||||||||||||||    
T  34610589 cctcacctcacaagtcggttttgtggggttgtgttagacccaaccacaatttctaa 34610644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 45828047 - 45828102
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||| | |||||||||| |  ||||||||||||||    
T  45828047 cctcacctcacaagccggttttgtgaggttgtgttaggccctaccacaatttctaa 45828102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 12930183 - 12930129
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||| |||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  12930183 ctcacttcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaa 12930129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 20303120 - 20303083
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttagg 38  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  20303120 cctcacctcacaaaccggttttgtgggattgtgttagg 20303083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 39269359 - 39269396
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttagg 38  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  39269359 cctcacctcacaagccggttttgagggattgtgttagg 39269396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 13741157 - 13741106
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaattt 52  Q
    |||||||||||||||||||||| |||| |||||||||  | |||||||||||    
T  13741157 cctcacctcacaagccggttttttggggttgtgttagacccaaccacaattt 13741106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 17638262 - 17638317
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||| ||||||| ||| |||||||||| | |||||| ||||||||    
T  17638262 cctcacctcacaagctggttttgaggggttgtgttaggcccaaccacgatttctaa 17638317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 34
Target Start/End: Complemental strand, 28087269 - 28087238
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgt 34  Q
    ||||||||||||||||||||||||||||||||    
T  28087269 tcacctcacaagccggttttgtgggattgtgt 28087238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37246723 - 37246668
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||| ||| |||| ||| ||||||||||||| |||||| ||||||||    
T  37246723 cctcacctcacaaaccgattttatggaattgtgttaggtccaaccacgatttctaa 37246668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 39683323 - 39683268
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||| ||||||||||||||||| |||||   |||||| ||||||||    
T  39683323 cctcacctcacaagacggttttgtgggattgtattaggctcaaccacgatttctaa 39683268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 45139027 - 45138972
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||| ||  | |||||| ||||||||    
T  45139027 cctcacctcacaagccggttttgtggggttgtgtaagacccaaccacgatttctaa 45138972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 54368544 - 54368599
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||||||| |||| |||||||||  | |||||| ||||||||    
T  54368544 cctcacctcacaagccggttttatggggttgtgttagacccaaccacgatttctaa 54368599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 33205493 - 33205547
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttcta 55  Q
    |||||||||||||||| |||||| ||| |||||||||| | |||||| |||||||    
T  33205493 cctcacctcacaagccagttttgcggggttgtgttaggcccaaccacgatttcta 33205547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 389685 - 389640
Alignment:
Q  7 ctcacaagccggttttgtgggattgtgttaggtcaaaccacaattt 52  Q
    |||||||||||||||||||||||||||||| |   |||||||||||    
T  389685 ctcacaagccggttttgtgggattgtgttatgctcaaccacaattt 389640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6487389 - 6487332
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||||||||||||||| |||| |||| ||||| | |||||| |||| |||||    
T  6487389 cctcacctcacaagccggttttatggggttgttttaggcccaaccacgatttttaata 6487332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8487569 - 8487512
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||| ||| || |||  |||||||||||| ||||||||||| |||||    
T  8487569 cctcacctcacaagctggtattctggagttgtgttaggtccaaccacaatttataata 8487512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 26272378 - 26272325
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||| | ||||||||| |||||||||  | |||||||||||||||    
T  26272378 tcacctcacaagctgattttgtggggttgtgttagacccaaccacaatttctaa 26272325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 31317496 - 31317549
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||| ||||| ||| |||||||||| | |||||| ||||||||    
T  31317496 tcacctcacaagccgattttgcggggttgtgttaggcccaaccacgatttctaa 31317549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 8142688 - 8142648
Alignment:
Q  16 cggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||| |||||||||||| |||||| ||||||||    
T  8142688 cggttttgtggggttgtgttaggtctaaccacgatttctaa 8142648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 18757870 - 18757922
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttc 53  Q
    |||||| ||||||| |||||||||||| |||||||||| | |||||| |||||    
T  18757870 cctcacatcacaaggcggttttgtggggttgtgttaggcccaaccacgatttc 18757922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 21809200 - 21809168
Alignment:
Q  4 cacctcacaagccggttttgtgggattgtgtta 36  Q
    ||||||||||||||||||||| |||||||||||    
T  21809200 cacctcacaagccggttttgtaggattgtgtta 21809168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 45828277 - 45828329
Alignment:
Q  4 cacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||| ||||||||||| |||||||||| | |||||  ||||||||    
T  45828277 cacctcacaagcaggttttgtggggttgtgttaggcccaaccatgatttctaa 45828329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 50083137 - 50083081
Alignment:
Q  1 cctcacctcacaagccggttttgt-gggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||||||||| ||| |||||||||| | |||||  ||||||||    
T  50083137 cctcacctcacaagccggttttgtgggggttgtgttaggcccaaccatgatttctaa 50083081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 4e-16; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 41035883 - 41035828
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||||||||||||||||||||||||| ||| || ||||||||    
T  41035883 cctcacctcacaagccggttttgtgggattgtgttaggtccaactacgatttctaa 41035828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25137359 - 25137302
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||| |||||||||||||||| |||||||||| | |||||||||||||||||    
T  25137359 cctcacctcataagccggttttgtggggttgtgttaggcccaaccacaatttctaata 25137302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 51589020 - 51589077
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  51589020 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaata 51589077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 51589254 - 51589311
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  51589254 cctcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaata 51589311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 51590066 - 51590123
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||||||||||||||||||||||||||||||| | || ||| ||||||||||    
T  51590066 cctcacctcacaagccggttttgtgggattgtgttaggcccaagcacgatttctaata 51590123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 3169796 - 3169851
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  3169796 tcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 3169851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 4113062 - 4113007
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  4113062 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 4113007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12509548 - 12509493
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||||| || ||||| ||||||    
T  12509548 cctcacctcacaagccggttttgtgggtttgtgttaggtcgaaacacaaattctaa 12509493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17452735 - 17452680
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  17452735 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 17452680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40079180 - 40079235
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  40079180 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 40079235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 25255340 - 25255394
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  25255340 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 25255394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 17452882 - 17452829
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  17452882 tcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaa 17452829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 51589834 - 51589891
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||| ||||||||| |||||||||| | |||||| ||||||||||    
T  51589834 cctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttctaata 51589891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 52127748 - 52127805
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||| | ||||||||| |||||||||||| |||||| ||||||||||    
T  52127748 cctcacctcacaagctgcttttgtggggttgtgttaggtccaaccacgatttctaata 52127805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 12245018 - 12244979
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtc 40  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  12245018 cctcacctcacaagccggttttgtggggttgtgttaggtc 12244979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15986389 - 15986334
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||| ||| ||||||| |||||||||||| |||||| ||||||||    
T  15986389 cctcacctcacaagctggtattgtggggttgtgttaggtccaaccaccatttctaa 15986334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27413375 - 27413430
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||| ||||||| | |||||||||||| |||||| ||||||||    
T  27413375 cctcacctcacaagccgattttgtgaggttgtgttaggtccaaccacgatttctaa 27413430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31432286 - 31432231
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| ||||| |||| | |||||| ||||||||    
T  31432286 cctcacctcacaagccggttttgtggggttgtgctaggcccaaccacgatttctaa 31432231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 35772057 - 35772112
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||| ||||||||||||||||| |||||||||| | |||||| ||||||||    
T  35772057 cctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 35772112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 38080632 - 38080683
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaattt 52  Q
    |||||||||||||||| |||||||||| |||||||||| | |||||||||||    
T  38080632 cctcacctcacaagccagttttgtggggttgtgttaggcccaaccacaattt 38080683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 52650827 - 52650772
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||| ||||||||||| |||||||||| | ||||| |||||||||    
T  52650827 cctcacctcacaagctggttttgtggggttgtgttaggcccaaccataatttctaa 52650772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 8870965 - 8870911
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||| |||||| ||||||||| |||||||||||| |||||| ||||||||    
T  8870965 ctcacctcataagccgtttttgtggggttgtgttaggtccaaccaccatttctaa 8870911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 43409835 - 43409889
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||||||| ||| |||||||| ||| |||||| ||||||||    
T  43409835 ctcacctcacaagccggttttggggggttgtgttatgtccaaccacgatttctaa 43409889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 26865411 - 26865354
Alignment:
Q  4 cacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatagtt 61  Q
    |||||||||||||||||||||||| |||| |||||   ||||||||||||||| ||||    
T  26865411 cacctcacaagccggttttgtggggttgtattaggctcaaccacaatttctaagagtt 26865354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 4098212 - 4098164
Alignment:
Q  8 tcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||| ||||||||||| |||||||||||| | |||||||||||||||    
T  4098212 tcacaaaccggttttgtgtgattgtgttaggcccaaccacaatttctaa 4098164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 7653508 - 7653559
Alignment:
Q  5 acctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||| |||| | |||||||||||||||||||| | |||||||||||||||    
T  7653508 acctcagaagctgattttgtgggattgtgttaggcccaaccacaatttctaa 7653559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12325616 - 12325561
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||| |||||||||| ||| |||||||| ||| ||| |||||||    
T  12325616 cctcacctcacaagccagttttgtggggttgagttaggtccaacgacagtttctaa 12325561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25145776 - 25145721
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||| |||||||| |||||||||| | |||||  ||||||||    
T  25145776 cctcacctcacaagccggatttgtggggttgtgttaggcccaaccatgatttctaa 25145721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31181569 - 31181514
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||| |||||| |||| |||||||||| | |||||||| ||||||    
T  31181569 cctcacctcacaagctggttttatggggttgtgttaggcccaaccacaaattctaa 31181514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33156761 - 33156816
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||| ||||||| ||||||||||||| |||||||||| | |||||| ||||||||    
T  33156761 cctcatctcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaa 33156816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 35772296 - 35772347
Alignment:
Q  5 acctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||| |||||||||||||||| |||||||||| | |||||| ||||||||    
T  35772296 acctcagaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 35772347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40316106 - 40316051
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||| |||||||||||||| | ||||||||| || |||||| ||||||||    
T  40316106 cctcacctcataagccggttttgtgaggttgtgttagatccaaccacgatttctaa 40316051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42586495 - 42586440
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||  ||||||||| |||||||||| | |||||| ||||||||    
T  42586495 cctcacctcacaagccaattttgtggggttgtgttaggcccaaccacgatttctaa 42586440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 7307750 - 7307804
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||| ||||||||| ||||| ||||||| | ||||| |||||||||    
T  7307750 ctcacctcacaagtcggttttgttggattatgttaggcctaaccataatttctaa 7307804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 29265982 - 29266036
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||| |||||| ||||||||||| |||||||||| | |||||| ||||||||    
T  29265982 ctcaccttacaagctggttttgtggggttgtgttaggcccaaccacgatttctaa 29266036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 38733180 - 38733234
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||| |||||||| |||||||||| |||||||||||||  |||||| ||||||||    
T  38733180 ctcatctcacaagtcggttttgtgagattgtgttaggttcaaccacgatttctaa 38733234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 51459752 - 51459706
Alignment:
Q  10 acaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||| |||||||||||||||| ||||| | |||||||||||||||    
T  51459752 acaagctggttttgtgggattgtattaggcccaaccacaatttctaa 51459706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 52961610 - 52961664
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttcta 55  Q
    |||||||||| ||||||||||| |||| |||||||||||| |||||  |||||||    
T  52961610 cctcacctcaaaagccggttttatggggttgtgttaggtccaaccatgatttcta 52961664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 856009 - 856046
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttagg 38  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  856009 cctcacctcacaagctggttttgtgagattgtgttagg 856046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 4112594 - 4112541
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||| |||| |||||||||||||||   |||||| ||||||||    
T  4112594 tcacctcacaagccgattttatgggattgtgttaggcacaaccacgatttctaa 4112541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 25713423 - 25713476
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||| |||||||||  |||||||||| | |||||| ||||||||    
T  25713423 tcacctcacaagccagttttgtggagttgtgttaggcctaaccaccatttctaa 25713476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 39348408 - 39348371
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttagg 38  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  39348408 cctcacctcacaaaccggttttgtggggttgtgttagg 39348371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 2859683 - 2859647
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttag 37  Q
    ||||||||||||||||||||||||| | |||||||||    
T  2859683 cctcacctcacaagccggttttgtgaggttgtgttag 2859647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 3170033 - 3170065
Alignment:
Q  5 acctcacaagccggttttgtgggattgtgttag 37  Q
    ||||||||||||||||||||||| |||||||||    
T  3170033 acctcacaagccggttttgtggggttgtgttag 3170065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 26173501 - 26173457
Alignment:
Q  12 aagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||| |||||||||||| ||||||  |||||||    
T  26173501 aagccggttttgtggggttgtgttaggtccaaccaccctttctaa 26173457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 26347024 - 26346988
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttag 37  Q
    |||||||||||||||| |||||||||| |||||||||    
T  26347024 cctcacctcacaagcccgttttgtggggttgtgttag 26346988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34027421 - 34027478
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  34027421 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 34027478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21055009 - 21054954
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  21055009 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaa 21054954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21861322 - 21861377
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||| ||||||||||||||||||||||||||||| | |||||| ||||||||    
T  21861322 cctcaccttacaagccggttttgtgggattgtgttaggcccaaccaccatttctaa 21861377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 25620164 - 25620219
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  25620164 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 25620219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32474528 - 32474583
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| ||| |||||| | |||||||||||||||    
T  32474528 cctcacctcacaagccggttttgtgggtttgcgttaggcccaaccacaatttctaa 32474583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29469633 - 29469690
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||| |||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  29469633 cctcaccttacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 29469690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 40746293 - 40746350
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||| |||||| ||||||||| |||||||||| | |||||||||||||||||    
T  40746293 cctcacctcataagccgattttgtggggttgtgttaggcccaaccacaatttctaata 40746350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 48661611 - 48661554
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||| |||||||||||  | |||||| ||||||||||    
T  48661611 cctcacctcacaagccggttttgtgagattgtgttagacccaaccacgatttctaata 48661554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 41191042 - 41191097
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||| |||||||||||||||||| |||||||||||||| || |||| |||||||    
T  41191042 cctcacatcacaagccggttttgtgagattgtgttaggtccaatcacagtttctaa 41191097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 47710471 - 47710526
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||| |||||||||| |||||||||| | |||||| ||||||||    
T  47710471 cctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaa 47710526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 47722127 - 47722182
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||| |||||||||| |||||||||| | |||||| ||||||||    
T  47722127 cctcacctcacaagccagttttgtggggttgtgttaggcccaaccaccatttctaa 47722182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 48243117 - 48243066
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaattt 52  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||    
T  48243117 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgattt 48243066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 31257316 - 31257266
Alignment:
Q  8 tcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  31257316 tcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 31257266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 36277046 - 36276992
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||| |||||| ||||||||||||||| | |||||| ||||||||    
T  36277046 ctcacctcacaagcaggttttatgggattgtgttaggcctaaccacgatttctaa 36276992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2544503 - 2544446
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||||||| |||||||||||| |||||||||| | |||||| |||| |||||    
T  2544503 cctcacctcacaagtcggttttgtggggttgtgttaggcccaaccacgatttttaata 2544446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 3393011 - 3393064
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttcta 55  Q
    |||||||||||||||| ||||||||| |||||||||| | |||||| |||||||    
T  3393011 ctcacctcacaagccgattttgtggggttgtgttaggcccaaccaccatttcta 3393064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 29469868 - 29469925
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||| |||||||||||||||||  |||||||||| | |||||| ||||||||||    
T  29469868 cctcaccttacaagccggttttgtggagttgtgttaggcccaaccacgatttctaata 29469925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 31892417 - 31892470
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||||||||||  ||||||||| | |||||| ||||||||    
T  31892417 tcacctcacaagccggttttgtggggatgtgttaggcccaaccacgatttctaa 31892470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 40746087 - 40746034
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||| ||| |||||||||||||||||||  | |||||||||||||||    
T  40746087 tcacctcacaaaccgattttgtgggattgtgttagacccaaccacaatttctaa 40746034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 5871628 - 5871576
Alignment:
Q  4 cacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| ||||||  | |||| ||||||||||    
T  5871628 cacctcacaagccggttttgtgggattttgttagacccaaccgcaatttctaa 5871576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 17202208 - 17202264
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||| ||||||||||||||||||||| |||||||||| | |||||| |||| |||||    
T  17202208 ctcatctcacaagccggttttgtggggttgtgttaggcccaaccacgatttttaata 17202264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1596622 - 1596676
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||| |||||||||||| ||||| |||||||||| | |||||||||||||||    
T  1596622 cctcaccttacaagccggttt-gtggggttgtgttaggcctaaccacaatttctaa 1596676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1596856 - 1596911
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||| ||||||||||||||| || |||||||||| | |||||||||| ||||    
T  1596856 cctcaccttacaagccggttttgtagggttgtgttaggcccaaccacaattactaa 1596911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3038140 - 3038085
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||| |||||||||||||||||||| |||||||||| | |||||  ||||||||    
T  3038140 cctcacgtcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaa 3038085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6782889 - 6782944
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||| |||||||||||||||||| ||||||||||   |||||| ||||||||    
T  6782889 cctcaccttacaagccggttttgtggggttgtgttaggctcaaccacgatttctaa 6782944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11211735 - 11211684
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaattt 52  Q
    ||||||||||||||||||||||||||| ||||||| || | |||||| ||||    
T  11211735 cctcacctcacaagccggttttgtggggttgtgttgggcccaaccacgattt 11211684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 26239972 - 26239917
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||| |||| ||||||| |||||||||  | |||||||||||||||    
T  26239972 cctcacctcacaagtcggtattgtggggttgtgttagacccaaccacaatttctaa 26239917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 26562127 - 26562072
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||| || |||||||   |||||| ||||||||||    
T  26562127 tcacctcacaagccggttttgtggggttatgttaggctcaaccaccatttctaata 26562072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31485715 - 31485660
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||| ||||||||||||||||   |||||||||| | |||||||||||||||    
T  31485715 cctcacctgacaagccggttttgtgaagttgtgttaggcctaaccacaatttctaa 31485660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34027655 - 34027710
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||| |||||||||||||||||||| |||||||||| | || ||| ||||||||    
T  34027655 cctcacttcacaagccggttttgtggggttgtgttaggcccaatcacgatttctaa 34027710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40121980 - 40121925
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||  |||||||||||||||||| |||||||||| | |||||| ||||||||    
T  40121980 cctcaccctacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 40121925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 2937997 - 2938031
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttag 37  Q
    |||||||||||||||||| ||||||||||||||||    
T  2937997 tcacctcacaagccggttgtgtgggattgtgttag 2938031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23839133 - 23839079
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttcta 55  Q
    ||||||||||||||||||||||||| | |||||||||| | | | ||||||||||    
T  23839133 cctcacctcacaagccggttttgtgaggttgtgttaggcccatcgacaatttcta 23839079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 33834448 - 33834482
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttag 37  Q
    ||||||||||||||||||||||||| |||||||||    
T  33834448 tcacctcacaagccggttttgtgggtttgtgttag 33834482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 36993129 - 36993075
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||| ||||||||||| |||||||||| | |||||  ||||||||    
T  36993129 ctcacctcacaagctggttttgtggggttgtgttaggcccaaccatgatttctaa 36993075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10882061 - 10882005
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| || | ||||| | |||||| ||||||||||    
T  10882061 cctcacctcacaagccggttttgtggggtt-tattaggcccaaccacgatttctaata 10882005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 21821840 - 21821889
Alignment:
Q  7 ctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||| ||| |||||||||||||||||||| | |||||| ||||||||    
T  21821840 ctcacaaaccgattttgtgggattgtgttaggcccaaccacgatttctaa 21821889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 32879670 - 32879633
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttagg 38  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  32879670 cctcacctcacaagccggttttgcggggttgtgttagg 32879633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 33996365 - 33996312
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||| |||||||||||  |||||||||| | |||||| ||||||||    
T  33996365 tcacctcacaagtcggttttgtggagttgtgttaggcccaaccacgatttctaa 33996312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 47849599 - 47849636
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttagg 38  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  47849599 cctcacctcacaacccggttttgtgggcttgtgttagg 47849636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 48417567 - 48417518
Alignment:
Q  5 acctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttct 54  Q
    ||||||||| || |||||||||| |||||||||| | |||||||||||||    
T  48417567 acctcacaaaccagttttgtggggttgtgttaggcccaaccacaatttct 48417518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 10903113 - 10903149
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttag 37  Q
    ||||||||||||||||||||||||||  |||||||||    
T  10903113 cctcacctcacaagccggttttgtggagttgtgttag 10903149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16419530 - 16419591
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatagttt 62  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| |||||||| |||||    
T  16419530 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagagttt 16419591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 19191666 - 19191609
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  19191666 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 19191609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40379265 - 40379204
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatagttt 62  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| |||||||| |||||    
T  40379265 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagagttt 40379204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 25082591 - 25082532
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatagttt 62  Q
    |||||||||||||| |||||||||| |||||||||||| |||||| |||||||| |||||    
T  25082591 tcacctcacaagccagttttgtggggttgtgttaggtccaaccacgatttctaagagttt 25082532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29718356 - 29718411
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  29718356 cctcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaa 29718411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40379500 - 40379445
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  40379500 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 40379445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2324268 - 2324325
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| |||||||||| | |||||| |||| |||||    
T  2324268 cctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttttaata 2324325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 31700798 - 31700746
Alignment:
Q  4 cacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||||||||| |||||||||| | |||||| ||||||||    
T  31700798 cacctcacaagccggttttgtgggtttgtgttaggcccaaccacgatttctaa 31700746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 2029797 - 2029852
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||| ||||| | |||||| ||||||||    
T  2029797 cctcacctcacaagccggttttgtggggttgttttaggcccaaccacgatttctaa 2029852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 2030032 - 2030087
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||| ||||| | |||||| ||||||||    
T  2030032 cctcacctcacaagccggttttgtggggttgttttaggcccaaccacgatttctaa 2030087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 2324502 - 2324561
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatagt 60  Q
    ||||||||||||||||||||||||||| ||||||||||   |||||| ||||| ||||||    
T  2324502 cctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttccaatagt 2324561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5711495 - 5711440
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||| |||||||||||||||||| |||||||||| | |||||| ||||||||    
T  5711495 cctcacctaacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 5711440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 14466466 - 14466411
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||| |||||||||||||||||| |||||||||| | |||||| ||||||||    
T  14466466 cctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaa 14466411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16419295 - 16419350
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||| ||||| | |||||| ||||||||    
T  16419295 cctcacctcacaagccggttttgtggggttgtattaggcccaaccacgatttctaa 16419350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17525155 - 17525100
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||| |||||||||||||||||| ||||||| ||| | |||||||||||||||    
T  17525155 cctcaccgcacaagccggttttgtggaattgtgtcaggcccaaccacaatttctaa 17525100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 17719428 - 17719483
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||||||||| || ||||||| || | |||||||||||||||    
T  17719428 cctcacctcacaagccggttttgtcgggttgtgttcggcccaaccacaatttctaa 17719483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 17854742 - 17854691
Alignment:
Q  7 ctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||| ||||||||||||||||||||||| | |||||| ||||||||||    
T  17854742 ctcacaagtcggttttgtgggattgtgttaggcccaaccacgatttctaata 17854691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28407849 - 28407794
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||  |||||||||| | |||||| ||||||||    
T  28407849 cctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaa 28407794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40149059 - 40149004
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||| ||||||||| |||||||||||| |||||  ||||||||    
T  40149059 cctcacctcacaagccgattttgtggggttgtgttaggtccaaccatgatttctaa 40149004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21383342 - 21383285
Alignment:
Q  1 cctcacctcacaagccggtttt--gtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||  ||||| |||||||||| | |||||||||||||||    
T  21383342 cctcacctcacaagccggttttttgtggggttgtgttaggcccaaccacaatttctaa 21383285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 27897661 - 27897607
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||| |||||||||||| |||||||||| | |||||| ||||||||    
T  27897661 ctcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaa 27897607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5509107 - 5509164
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||| ||||||||||| |||||||||| | |||||  ||||||||||    
T  5509107 cctcacctcacaagctggttttgtggggttgtgttaggcccaaccatgatttctaata 5509164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5509341 - 5509398
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||| ||||||||||||||||||| | |||||||||| |||||| |||| |||||    
T  5509341 cctcaccccacaagccggttttgtggggtagtgttaggtccaaccacgatttttaata 5509398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 17525394 - 17525361
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgt 34  Q
    ||||||||||||||||||||||||||||||||||    
T  17525394 cctcacctcacaagccggttttgtgggattgtgt 17525361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17854985 - 17854928
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||||| ||||| |||  | |||||| ||||||||||    
T  17854985 cctcacctcacaagccggttttgtggggttgtgctagacccaaccacgatttctaata 17854928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 32884135 - 32884172
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttagg 38  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  32884135 cctcacctcacaagccggttttgtggggttgtgttagg 32884172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 36352213 - 36352164
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaattt 52  Q
    |||||||| |||||||||||||||| |||||||||||  |||||||||||    
T  36352213 tcacctcaaaagccggttttgtggggttgtgttaggttcaaccacaattt 36352164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 37840367 - 37840416
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaattt 52  Q
    ||||||||||||||||||||||||| ||||||| || | |||||||||||    
T  37840367 tcacctcacaagccggttttgtggggttgtgttgggcccaaccacaattt 37840416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 5450544 - 5450492
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttcta 55  Q
    ||||||||||||||||||||||||| |||| ||||| | |||||||| |||||    
T  5450544 tcacctcacaagccggttttgtggggttgtcttaggcccaaccacaaattcta 5450492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5851738 - 5851682
Alignment:
Q  1 cctcacctcacaagccggttttgtgg-gattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||||||||||| | |||||||||||| |||||  ||||||||    
T  5851738 cctcacctcacaagccggttttgtggaggttgtgttaggtccaaccatcatttctaa 5851682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 21383723 - 21383671
Alignment:
Q  4 cacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||| ||||||||||||||||| |||||| | |||||| ||||||||    
T  21383723 cacctcacaaaccggttttgtgggattgagttaggcccaaccacgatttctaa 21383671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 11020586 - 11020625
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtc 40  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  11020586 cctcacctcacaagccgatttagtgggattgtgttaggtc 11020625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 17719598 - 17719649
Alignment:
Q  5 acctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||| ||||||||||||| |||||||||| | |||||| ||||||||    
T  17719598 acctcacaaaccggttttgtggggttgtgttaggcccaaccacgatttctaa 17719649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24395891 - 24395946
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||  || ||||||||| |||||||||| |||||||| ||||||||    
T  24395891 cctcacctcacaaatcgattttgtggggttgtgttaggccaaaccacgatttctaa 24395946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 15451498 - 15451448
Alignment:
Q  8 tcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||| ||||||||||||||| |||| | ||||||||||| |||||    
T  15451498 tcacaagccgattttgtgggattgtggtaggcccaaccacaatttttaata 15451448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 19544426 - 19544372
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||||||||||||||||||||   | ||||||||| |||||| ||||||||    
T  19544426 ctcacctcacaagccggttttgtggagctatgttaggtccaaccacgatttctaa 19544372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 31008626 - 31008572
Alignment:
Q  2 ctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||| |||||||||||||| ||||||||||   ||||||| |||||||    
T  31008626 ctcacctcacatgccggttttgtggggttgtgttaggctcaaccacagtttctaa 31008572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 37769997 - 37769939
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatagtt 61  Q
    |||||||| |||||||||||||||| |||||||||  | |||||| |||| ||||||||    
T  37769997 tcacctcataagccggttttgtggggttgtgttagacccaaccacgatttttaatagtt 37769939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 5711729 - 5711676
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||| | |||||||||||||||| |||||||||| | |||||| ||||||||    
T  5711729 tcaccttaaaagccggttttgtggggttgtgttaggcccaaccaccatttctaa 5711676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 10523049 - 10523102
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||| ||||||  |||||||||||||||||||| | |||||| ||||||||    
T  10523049 tcacctcgcaagccatttttgtgggattgtgttaggcccaaccacgatttctaa 10523102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 10571000 - 10571053
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||| |||||||||||||||||| ||||||||||   |||||| ||||||||    
T  10571000 tcaccttacaagccggttttgtggggttgtgttaggctcaaccacgatttctaa 10571053  T

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Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 9952134 - 9952094
Alignment:
Q  7 ctcacaagccggttttgtgggattgtgttaggtcaaaccac 47  Q
    ||||||| ||||||||||||||||| |||||||| ||||||    
T  9952134 ctcacaatccggttttgtgggattgcgttaggtccaaccac 9952094  T

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Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13486362 - 13486418
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaat 57  Q
    ||||||||||||| | | ||||||||| |||||||||| | |||||| |||||||||    
T  13486362 cctcacctcacaaactgattttgtggggttgtgttaggcctaaccacgatttctaat 13486418  T

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Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19571030 - 19570970
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatagtt 61  Q
    |||||||||| ||| || |||||||| ||||||||||| | |||||| |||||||| ||||    
T  19571030 cctcacctcataagtcgattttgtggaattgtgttaggcccaaccacgatttctaagagtt 19570970  T

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Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 58
Target Start/End: Original strand, 56489 - 56544
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||| |||||||||| | |||||| ||||||||||    
T  56489 tcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaata 56544  T

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Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 288713 - 288653
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatagtt 61  Q
    ||||||||||||||| ||||||||||  |||||||||| | |||||  |||||||| ||||    
T  288713 cctcacctcacaagctggttttgtggagttgtgttaggcccaaccatgatttctaagagtt 288653  T

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Target: scaffold0400 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3873 - 3930
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||||||||| |||||||||| ||||||||||   |||||||||||||||||    
T  3873 cctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaata 3930  T

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Target: scaffold0365 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4517 - 4574
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    |||||||||||||||| |||||||||| ||||||||||   |||||||||||||||||    
T  4517 cctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaata 4574  T

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Target: scaffold0766 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 6302 - 6365
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatagtttgt 64  Q
    ||||||||||||||||| ||||||||| |||||||||| | |||||| |||||| | |||||||    
T  6302 cctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttcttagagtttgt 6365  T

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Target: scaffold0519 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1944 - 1999
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||| |||||||||||||||||| |||||||||| | |||||| ||||||||    
T  1944 cctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaa 1999  T

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Target: scaffold0519; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 2179 - 2234
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||||| |||||||||||||||||| |||||||||| | |||||| ||||||||    
T  2179 cctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaa 2234  T

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Target: scaffold0181 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20967 - 21022
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||||| |||||||| | | |||||| ||||||||    
T  20967 cctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaa 21022  T

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Target: scaffold0334 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 4485 - 4448
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttagg 38  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  4485 cctcacctcacaagccggttttgtggggttgtgttagg 4448  T

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Target: scaffold0129 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 14333 - 14386
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||||||||||||||||||||||| |||||||||| | ||||||  |||||||    
T  14333 tcacctcacaagccggttttgtggggttgtgttaggcccaaccacgttttctaa 14386  T

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Target: scaffold0692 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5600 - 5545
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||| |||||||||||||||| ||| |||||||||| | ||||| |||||||||    
T  5600 cctcacttcacaagccggttttgcggggttgtgttaggcccaaccataatttctaa 5545  T

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Target: scaffold0692; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5810 - 5755
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    ||||| ||||||||||||||||| ||| |||||||||| | |||||| ||||||||    
T  5810 cctcatctcacaagccggttttgcggggttgtgttaggcccaaccacgatttctaa 5755  T

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Target: scaffold0481 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 3 - 58
Target Start/End: Complemental strand, 3525 - 3470
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaata 58  Q
    ||||||||||||||||||||||||| |||||||||  | || ||| ||||||||||    
T  3525 tcacctcacaagccggttttgtggggttgtgttagacccaatcacgatttctaata 3470  T

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Target: scaffold0481; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3296 - 3236
Alignment:
Q  1 cctcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatagtt 61  Q
    ||||| ||||||||||||||||||  |||||||||||    |||||| |||||||||||||    
T  3296 cctcatctcacaagccggttttgtaagattgtgttagacacaaccacgatttctaatagtt 3236  T

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Target: scaffold0048 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 61
Target Start/End: Original strand, 82113 - 82164
Alignment:
Q  10 acaagccggttttgtgggattgtgttaggtcaaaccacaatttctaatagtt 61  Q
    |||| ||||||||||||| |||||||||| | ||||||||||||||| ||||    
T  82113 acaaaccggttttgtggggttgtgttaggcccaaccacaatttctaagagtt 82164  T

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Target: scaffold0048; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 81872 - 81925
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaatttctaa 56  Q
    |||||| ||||| |||||||||||| |||||||||| | |||||| ||||||||    
T  81872 tcaccttacaagtcggttttgtggggttgtgttaggcccaaccacgatttctaa 81925  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 89607 - 89558
Alignment:
Q  3 tcacctcacaagccggttttgtgggattgtgttaggtcaaaccacaattt 52  Q
    |||||| ||||| |||||||||| | |||||||||||| |||||||||||    
T  89607 tcaccttacaagtcggttttgtgaggttgtgttaggtccaaccacaattt 89558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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