View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20649_low_6 (Length: 256)

Name: NF20649_low_6
Description: NF20649
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20649_low_6
NF20649_low_6
[»] chr5 (9 HSPs)
chr5 (17-256)||(32022090-32022331)
chr5 (166-256)||(32010282-32010374)
chr5 (17-78)||(12857695-12857756)
chr5 (36-78)||(12857328-12857370)
chr5 (17-95)||(16937856-16937934)
chr5 (26-78)||(3735148-3735200)
chr5 (17-95)||(7705971-7706049)
chr5 (26-95)||(16457952-16458021)
chr5 (26-78)||(9107118-9107170)
[»] chr3 (10 HSPs)
chr3 (166-256)||(48115726-48115818)
chr3 (17-78)||(30443912-30443973)
chr3 (218-256)||(48125793-48125831)
chr3 (17-68)||(35959456-35959507)
chr3 (17-95)||(20880495-20880573)
chr3 (26-66)||(43062719-43062759)
chr3 (17-68)||(28795853-28795904)
chr3 (26-95)||(21367695-21367764)
chr3 (17-73)||(36631046-36631102)
chr3 (26-78)||(53789451-53789503)
[»] chr1 (14 HSPs)
chr1 (17-68)||(37631559-37631610)
chr1 (17-95)||(49938766-49938844)
chr1 (17-78)||(14576644-14576704)
chr1 (18-78)||(15477585-15477645)
chr1 (18-65)||(47432115-47432162)
chr1 (17-66)||(29904770-29904819)
chr1 (26-78)||(24915041-24915093)
chr1 (17-68)||(13810017-13810068)
chr1 (17-95)||(2295115-2295193)
chr1 (29-91)||(37517143-37517205)
chr1 (26-67)||(473192-473233)
chr1 (17-90)||(17603362-17603435)
chr1 (17-78)||(51929529-51929590)
chr1 (26-78)||(37473431-37473483)
[»] chr8 (7 HSPs)
chr8 (17-67)||(18133675-18133725)
chr8 (21-78)||(11407338-11407395)
chr8 (18-95)||(26771285-26771362)
chr8 (19-73)||(9130301-9130355)
chr8 (28-78)||(10758247-10758297)
chr8 (17-67)||(12976232-12976281)
chr8 (26-78)||(35534603-35534655)
[»] chr2 (8 HSPs)
chr2 (17-78)||(43279519-43279580)
chr2 (26-62)||(12464479-12464515)
chr2 (26-81)||(26202056-26202111)
chr2 (26-68)||(12194980-12195022)
chr2 (34-73)||(15757653-15757692)
chr2 (17-68)||(20926522-20926573)
chr2 (17-67)||(40835547-40835597)
chr2 (26-67)||(1633493-1633534)
[»] scaffold0103 (1 HSPs)
scaffold0103 (17-65)||(51996-52044)
[»] chr6 (1 HSPs)
chr6 (26-90)||(35070628-35070692)
[»] chr4 (8 HSPs)
chr4 (26-90)||(17822843-17822907)
chr4 (17-97)||(54426062-54426142)
chr4 (17-68)||(50662738-50662789)
chr4 (21-95)||(22030226-22030300)
chr4 (28-78)||(55302279-55302329)
chr4 (25-78)||(7839351-7839404)
chr4 (26-95)||(13126549-13126618)
chr4 (26-78)||(55414410-55414462)
[»] chr7 (11 HSPs)
chr7 (17-68)||(38138479-38138530)
chr7 (26-68)||(3928010-3928052)
chr7 (23-73)||(27566689-27566739)
chr7 (25-78)||(19302553-19302606)
chr7 (17-78)||(27863715-27863776)
chr7 (26-67)||(28614461-28614502)
chr7 (17-78)||(39629947-39630008)
chr7 (26-78)||(11619148-11619200)
chr7 (17-73)||(28341052-28341107)
chr7 (17-73)||(34744047-34744103)
chr7 (26-78)||(38499903-38499955)
[»] scaffold0221 (1 HSPs)
scaffold0221 (28-78)||(22261-22311)


Alignment Details
Target: chr5 (Bit Score: 211; Significance: 1e-116; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 17 - 256
Target Start/End: Original strand, 32022090 - 32022331
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgttctcgtatgttcttccaagctttaatcttttgcttcaat 116  Q
    |||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  32022090 ctatattaaataacttgagaaaataggctgaaaaaagcttgtgaaaattgtcttaagatgttttcgtaagttcttccaagctttaatcttttgcttcaat 32022189  T
Q  117 tttgattattcttggtatactaatcaggcaattatcataattggactgcaatttccatctctgctctatatcttgtattacttttatttgtcatatgatc 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32022190 tttgattattcttggtatactaatcaggcaattatcataattggactgcaatttccatctctgctctatatcttgtattacttttatttgtcatatgatc 32022289  T
Q  217 t--taagttatttttgcaggttgaaaggcgtcaatctgaatt 256  Q
    |  |||||||||||||||||||||||||||||||||||||||    
T  32022290 ttataagttatttttgcaggttgaaaggcgtcaatctgaatt 32022331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 166 - 256
Target Start/End: Original strand, 32010282 - 32010374
Alignment:
Q  166 aatttccatctctgctctatatcttgtattacttttatttgtcatatgatctta--agttatttttgcaggttgaaaggcgtcaatctgaatt 256  Q
    |||||| |||||||| || ||| ||||||| |||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  32010282 aatttctatctctgcactgtatattgtattccttttatttgtcatatcatcttataagttatttttgcaggttgaaaggcgtcaatctgaatt 32010374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 12857756 - 12857695
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    |||||||  ||||||| |||||||||||||||||||| |||||||||||||| |||| ||||    
T  12857756 ctatattggagaacttatgaaaataagctgaaaaaaggttgtgaaaattgtcataagttgtt 12857695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 12857370 - 12857328
Alignment:
Q  36 aaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    ||||||||||||||||||||||||||||||||| |||| ||||    
T  12857370 aaaataagctgaaaaaagcttgtgaaaattgtcataagttgtt 12857328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 16937934 - 16937856
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgttctcgtatgttcttccaa 95  Q
    |||||||  |||||||  |||||||||||||||||||||| ||||| ||||| |||| |||| || || ||||||||||    
T  16937934 ctatattggagaacttaggaaaataagctgaaaaaagcttatgaaatttgtcataagctgttttcataagttcttccaa 16937856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 3735200 - 3735148
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    ||||||| |||| |||||||||||||||||| ||||||||||| |||| ||||    
T  3735200 agaacttatgaagataagctgaaaaaagcttttgaaaattgtcataagctgtt 3735148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 7706049 - 7705971
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgttctcgtatgttcttccaa 95  Q
    |||||||  ||||||||||||||||||| |||||||||  ||||||| |||| |||| |||| || || ||||| ||||    
T  7706049 ctatattggagaacttgtgaaaataagccgaaaaaagcaggtgaaaactgtcataagctgttttcataagttctcccaa 7705971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 16458021 - 16457952
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgttctcgtatgttcttccaa 95  Q
    ||||||||||||||||| ||||||| ||||| |||||| |||| |||| |||| || || ||||| ||||    
T  16458021 agaacttgtgaaaataaactgaaaagagcttatgaaaactgtcataagctgttttcataagttctcccaa 16457952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 9107118 - 9107170
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    ||||||| ||||||| ||| |||||||| |||||||||||||| |||| ||||    
T  9107118 agaacttatgaaaattagcagaaaaaagtttgtgaaaattgtcctaagctgtt 9107170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 256
Target Start/End: Complemental strand, 48115818 - 48115726
Alignment:
Q  166 aatttccatctctgctctatatcttgtattacttttatttgtcatatgatctta-ag-ttatttttgcaggttgaaaggcgtcaatctgaatt 256  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| || ||| || |||||||||||||||||| ||| |||||| |||||    
T  48115818 aatttccatctctgctctatatcttgtattacttttattggtcatataattttatagcttatttttgcaggttgaacggcatcaatcagaatt 48115726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 30443912 - 30443973
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    |||||||  ||||||| ||||||||||||||||||||||||||||||||||| |||| ||||    
T  30443912 ctatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgtcataagctgtt 30443973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 256
Target Start/End: Complemental strand, 48125831 - 48125793
Alignment:
Q  218 taagttatttttgcaggttgaaaggcgtcaatctgaatt 256  Q
    |||||||||||||||||||||||||||||||||||||||    
T  48125831 taagttatttttgcaggttgaaaggcgtcaatctgaatt 48125793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 35959507 - 35959456
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtc 68  Q
    |||||||| |||| || ||||||||||||||||||||||| |||||||||||    
T  35959507 ctatattagagaatttttgaaaataagctgaaaaaagcttttgaaaattgtc 35959456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 20880495 - 20880573
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgttctcgtatgttcttccaa 95  Q
    |||||||  ||||||| |||||||||||| |||||||||| ||||||||||| |||| |||| || || ||||| ||||    
T  20880495 ctatattggagaacttatgaaaataagctcaaaaaagcttatgaaaattgtcataagctgttttcataggttctcccaa 20880573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 43062719 - 43062759
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaaattg 66  Q
    ||||||| |||||| ||||||||||||||||||||||||||    
T  43062719 agaacttatgaaaagaagctgaaaaaagcttgtgaaaattg 43062759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 28795904 - 28795853
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtc 68  Q
    |||||||| ||||||| ||||||||||||||||| |||||  ||||||||||    
T  28795904 ctatattagagaacttatgaaaataagctgaaaagagcttaagaaaattgtc 28795853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 21367695 - 21367764
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgttctcgtatgttcttccaa 95  Q
    ||||||| ||||||||||||||||| |||||||||| | |||| |||| |||| || || ||||| ||||    
T  21367695 agaacttatgaaaataagctgaaaacagcttgtgaacaatgtcataagctgttttcataagttctcccaa 21367764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 36631102 - 36631046
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaag 73  Q
    |||||||  ||||||| ||||||||||| ||||||||||| ||||||| ||| ||||    
T  36631102 ctatattggagaacttatgaaaataagcagaaaaaagcttttgaaaatcgtcataag 36631046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 53789503 - 53789451
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    ||||||| ||||| ||||||||||||||||| |||||| |||| |||| ||||    
T  53789503 agaacttatgaaattaagctgaaaaaagcttatgaaaagtgtcataagctgtt 53789451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 37631610 - 37631559
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtc 68  Q
    |||||||  ||||||| |||||||||||||||||||||||||||||||||||    
T  37631610 ctatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgtc 37631559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 49938766 - 49938844
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgttctcgtatgttcttccaa 95  Q
    |||||||| ||||||| |||||||||| |||||||||||| ||||||||||| |||| |||| || || ||||| ||||    
T  49938766 ctatattagagaacttatgaaaataagttgaaaaaagcttttgaaaattgtcataagctgttttcataagttctcccaa 49938844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 14576704 - 14576644
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    |||||||| ||||||| ||||||||||||||||||||||| ||||||||||| |||| ||||    
T  14576704 ctatattagagaactt-tgaaaataagctgaaaaaagcttttgaaaattgtcataagctgtt 14576644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 15477585 - 15477645
Alignment:
Q  18 tatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    ||||||| ||||||| |||| |||||||||||||||||| ||||||||||| |||| ||||    
T  15477585 tatattagagaacttatgaatataagctgaaaaaagcttttgaaaattgtcataagctgtt 15477645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 47432115 - 47432162
Alignment:
Q  18 tatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaatt 65  Q
    |||||| ||||| || ||||||||||||||||||||||||||||||||    
T  47432115 tatattgaagaatttatgaaaataagctgaaaaaagcttgtgaaaatt 47432162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 29904770 - 29904819
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattg 66  Q
    |||||||| ||||||| |||||||||| |||||||||||| |||||||||    
T  29904770 ctatattatagaacttatgaaaataaggtgaaaaaagcttttgaaaattg 29904819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 24915093 - 24915041
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    |||||||||||||||||| |||||||||||| |||||| |||| |||| ||||    
T  24915093 agaacttgtgaaaataagttgaaaaaagcttatgaaaaatgtcataagttgtt 24915041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 13810017 - 13810068
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtc 68  Q
    |||||||| |||||||||||||||||||| | |||| ||| |||||||||||    
T  13810017 ctatattagagaacttgtgaaaataagctaagaaaaacttttgaaaattgtc 13810068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 2295115 - 2295193
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgttctcgtatgttcttccaa 95  Q
    |||||| | |||||||||||||||||| |||| | ||||| ||||||||||| |||| |||| || || ||||| ||||    
T  2295115 ctatatcagagaacttgtgaaaataagttgaatagagcttatgaaaattgtcataagctgttttcataagttctcccaa 2295193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 37517205 - 37517143
Alignment:
Q  29 acttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgttctcgtatgttctt 91  Q
    |||| |||||||||  |||||||||||| ||||||||||| |||| |||| ||||| ||||||    
T  37517205 acttatgaaaataaattgaaaaaagcttttgaaaattgtcataagctgttttcgtaagttctt 37517143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 473192 - 473233
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaaattgt 67  Q
    ||||||| |||||||||| |||||||||||| ||||||||||    
T  473192 agaacttatgaaaataagttgaaaaaagcttatgaaaattgt 473233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 17603435 - 17603362
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgttctcgtatgttct 90  Q
    |||||||  ||||||| |||||||||| || |||||| || ||||||||||| |||| |||| ||||| |||||    
T  17603435 ctatattggagaacttctgaaaataagttgtaaaaagtttatgaaaattgtcataagctgttttcgtaagttct 17603362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 51929590 - 51929529
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    |||||||  ||||||| || ||||||| |||||||||||| ||||||||||| |||| ||||    
T  51929590 ctatattggagaacttatggaaataagttgaaaaaagcttatgaaaattgtcataagctgtt 51929529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 37473431 - 37473483
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    ||||||| ||||||||||||| ||||||||| |||||| |||| |||| ||||    
T  37473431 agaacttatgaaaataagctggaaaaagcttatgaaaaatgtcataagttgtt 37473483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 18133675 - 18133725
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgt 67  Q
    |||||||  ||||||| ||||||||||||||||||||||||||||||||||    
T  18133675 ctatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgt 18133725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 11407395 - 11407338
Alignment:
Q  21 attaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    |||||||||||| | |||||||| ||||||||||||||||||||||| ||||| ||||    
T  11407395 attaaagaacttataaaaataagttgaaaaaagcttgtgaaaattgtattaagttgtt 11407338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 26771285 - 26771362
Alignment:
Q  18 tatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgttctcgtatgttcttccaa 95  Q
    ||||||| ||||||| |||||||||| ||||||| |||| ||||||||||| |||| |||| || || ||||| ||||    
T  26771285 tatattagagaacttatgaaaataagttgaaaaaggcttttgaaaattgtcataagctgttttcataagttctcccaa 26771362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 9130355 - 9130301
Alignment:
Q  19 atattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaag 73  Q
    ||||||||||||||||||||||||| |||||||| |||   ||||||||| ||||    
T  9130355 atattaaagaacttgtgaaaataagttgaaaaaaacttacaaaaattgtcataag 9130301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 10758297 - 10758247
Alignment:
Q  28 aacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    ||||| |||||| |||||||||||||||| ||||||||||| |||| ||||    
T  10758297 aacttatgaaaacaagctgaaaaaagcttttgaaaattgtcataagctgtt 10758247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 12976232 - 12976281
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgt 67  Q
    |||||||| ||||||| ||||| ||||||||||||||||| ||||||||||    
T  12976232 ctatattagagaacttatgaaa-taagctgaaaaaagcttttgaaaattgt 12976281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 35534655 - 35534603
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    ||||||| ||||| ||||| ||||||||||||| ||||||||| |||| ||||    
T  35534655 agaacttatgaaagtaagccgaaaaaagcttgttaaaattgtcataagctgtt 35534603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 43279580 - 43279519
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    |||||||  |||||||||||||||||| |||||||||||| ||||||||||| |||| ||||    
T  43279580 ctatattggagaacttgtgaaaataagttgaaaaaagcttatgaaaattgtcataagctgtt 43279519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 12464515 - 12464479
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaa 62  Q
    |||||||||||||||||||||||||||||||||||||    
T  12464515 agaacttgtgaaaataagctgaaaaaagcttgtgaaa 12464479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 26202056 - 26202111
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgttctc 81  Q
    ||||||| |||||||||| |||||||||||| ||||||||||| |||| |||||||    
T  26202056 agaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataagttgttctc 26202111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 12194980 - 12195022
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtc 68  Q
    |||||||||||||||||| |||||||||||| |||||||||||    
T  12194980 agaacttgtgaaaataagttgaaaaaagcttatgaaaattgtc 12195022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 73
Target Start/End: Complemental strand, 15757692 - 15757653
Alignment:
Q  34 tgaaaataagctgaaaaaagcttgtgaaaattgtcttaag 73  Q
    ||||||||||||||||||||||| ||||||||||| ||||    
T  15757692 tgaaaataagctgaaaaaagcttctgaaaattgtcataag 15757653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 20926522 - 20926573
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtc 68  Q
    |||||||| ||||||| |||||||||| |||||||||||  |||||||||||    
T  20926522 ctatattagagaacttatgaaaataagttgaaaaaagctaatgaaaattgtc 20926573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 67
Target Start/End: Original strand, 40835547 - 40835597
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgt 67  Q
    |||||||  ||||||| |||||||||||  |||||||||||||||||||||    
T  40835547 ctatattggagaacttatgaaaataagccaaaaaaagcttgtgaaaattgt 40835597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 1633534 - 1633493
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaaattgt 67  Q
    ||||||| |||||||||||||||||| ||| |||||||||||    
T  1633534 agaacttatgaaaataagctgaaaaaggctagtgaaaattgt 1633493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 51996 - 52044
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaatt 65  Q
    |||||||||||||||| |||||||||| |||||||||||| ||||||||    
T  51996 ctatattaaagaacttatgaaaataagttgaaaaaagcttttgaaaatt 52044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 35070692 - 35070628
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgttctcgtatgttct 90  Q
    ||||||| |||||| ||||  |||||||||||||||||||||| |||| |||| ||||| |||||    
T  35070692 agaacttatgaaaacaagcccaaaaaagcttgtgaaaattgtcataagctgttttcgtaagttct 35070628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000001; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 17822907 - 17822843
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgttctcgtatgttct 90  Q
    ||||||| |||||||||||| |||||||||| |||||| |||| |||| |||| || ||||||||    
T  17822907 agaacttatgaaaataagctaaaaaaagcttatgaaaaatgtcataagctgttttcatatgttct 17822843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 54426062 - 54426142
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgttctcgtatgttcttccaagc 97  Q
    |||||||  ||||||| |||||||||  |||||||||||| ||||||||||| |||| |||| || || ||||| ||||||    
T  54426062 ctatattggagaacttatgaaaataacttgaaaaaagcttatgaaaattgtcataagctgttttcctaagttctcccaagc 54426142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 50662789 - 50662738
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtc 68  Q
    |||||||  |||| ||||||||||||| |||||||||||| |||||||||||    
T  50662789 ctatattggagaaattgtgaaaataagttgaaaaaagcttatgaaaattgtc 50662738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 22030226 - 22030300
Alignment:
Q  21 attaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgttctcgtatgttcttccaa 95  Q
    |||| ||||||| ||||||||| |||| |||||||| ||||||||||| |||| |||| || || ||||| ||||    
T  22030226 attagagaacttatgaaaataacctgagaaaagcttttgaaaattgtcataagctgttttcataagttctcccaa 22030300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 55302279 - 55302329
Alignment:
Q  28 aacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    ||||| |||||||||||||||||||||||  |||||||||| |||| ||||    
T  55302279 aacttatgaaaataagctgaaaaaagcttacgaaaattgtcataagctgtt 55302329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 7839404 - 7839351
Alignment:
Q  25 aagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    ||||||||  ||||||||| |||||||||||| ||||||||||| |||| ||||    
T  7839404 aagaacttacgaaaataagttgaaaaaagcttatgaaaattgtcataagttgtt 7839351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 13126618 - 13126549
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgttctcgtatgttcttccaa 95  Q
    ||||||| ||||||||||||||||||||||| ||| || |||| |||| |||| |  || ||||||||||    
T  13126618 agaacttatgaaaataagctgaaaaaagcttatgataaatgtcataagctgtttttataagttcttccaa 13126549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 55414462 - 55414410
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    ||||||| |||||||||| |||||||||||| |||||| |||| |||| ||||    
T  55414462 agaacttatgaaaataagttgaaaaaagcttatgaaaaatgtcataagctgtt 55414410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.000000006; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 38138530 - 38138479
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtc 68  Q
    ||||||| | |||||| |||||||||| |||||||||||| |||||||||||    
T  38138530 ctatattgacgaacttatgaaaataagttgaaaaaagcttatgaaaattgtc 38138479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 3928052 - 3928010
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtc 68  Q
    ||||||| |||||||||| |||||||||||| |||||||||||    
T  3928052 agaacttatgaaaataagttgaaaaaagcttatgaaaattgtc 3928010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 27566739 - 27566689
Alignment:
Q  23 taaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaag 73  Q
    |||| ||||| |||||||||| |||||||||||||||||| ||||| ||||    
T  27566739 taaaaaacttatgaaaataagttgaaaaaagcttgtgaaagttgtcataag 27566689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 19302606 - 19302553
Alignment:
Q  25 aagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    |||||||| |||||||||| ||||||||| || ||||||||||| |||| ||||    
T  19302606 aagaacttatgaaaataagttgaaaaaagtttatgaaaattgtcataagctgtt 19302553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 27863776 - 27863715
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    |||||||| ||||||| |||| ||||||||||||||| || |||||||| ||| ||| ||||    
T  27863776 ctatattagagaacttatgaacataagctgaaaaaagtttttgaaaattttctcaagctgtt 27863715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 28614461 - 28614502
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaaattgt 67  Q
    ||||||| ||||| ||| ||||||||||||||||||||||||    
T  28614461 agaacttatgaaattaaactgaaaaaagcttgtgaaaattgt 28614502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 39630008 - 39629947
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    ||||||| |||||||| |||  ||||| |||||||||||| ||||||||||| |||| ||||    
T  39630008 ctatattgaagaacttatgactataagttgaaaaaagcttatgaaaattgtcataagctgtt 39629947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 11619200 - 11619148
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    ||||||| ||||| |||| |||||||||||| ||||||||||| |||| ||||    
T  11619200 agaacttatgaaattaagttgaaaaaagcttatgaaaattgtcataagttgtt 11619148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 28341107 - 28341052
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaag 73  Q
    |||||||| ||||||| ||||| ||||||| ||||||||| ||||||||||| ||||    
T  28341107 ctatattagagaacttatgaaa-taagctggaaaaagcttttgaaaattgtcataag 28341052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 34744047 - 34744103
Alignment:
Q  17 ctatattaaagaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaag 73  Q
    |||||||  ||||||| | ||||||||  ||||||||||||||||||||||| ||||    
T  34744047 ctatattggagaacttataaaaataaggcgaaaaaagcttgtgaaaattgtcataag 34744103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 38499955 - 38499903
Alignment:
Q  26 agaacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    ||||||| ||||||||||||| ||||||||| |||||| |||| |||| ||||    
T  38499955 agaacttatgaaaataagctggaaaaagcttatgaaaaatgtcataagctgtt 38499903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 22261 - 22311
Alignment:
Q  28 aacttgtgaaaataagctgaaaaaagcttgtgaaaattgtcttaagatgtt 78  Q
    ||||| |||||||||||||||||||||||  |||||||||| |||| ||||    
T  22261 aacttatgaaaataagctgaaaaaagcttacgaaaattgtcataagctgtt 22311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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