View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2064_high_16 (Length: 337)
Name: NF2064_high_16
Description: NF2064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2064_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 16 - 321
Target Start/End: Original strand, 40552847 - 40553152
Alignment:
| Q |
16 |
attaagcatgtatgaattgtgagttttcttatttgtagtaagagaataatttggggatgtttctttcttgctagggatatgaagtgctcaagctgctaaa |
115 |
Q |
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| T |
40552847 |
attaagcatgtatgaattgtgagttttcttatttgtagtaagagaataatttggggatgtttctttcttgctagggatatgaagtgctcaagctgctaaa |
40552946 |
T |
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| Q |
116 |
tgtgcttcttcctgaggtgactgaaaatcagaatgatcctctagtgctagacaaagaatcatttttagctgatcgcccgtatctcatagaaaagcttgtg |
215 |
Q |
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| T |
40552947 |
tgtgcttcttcctgaggtgactgaaaatcagaatgatcctctagtgctagacaaagaatcatttttagctgatcgcccgtatctcatagaaaagcttgcg |
40553046 |
T |
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| Q |
216 |
atggatgcacttcctcggttgatccaggttggttgaatttcttgttattatcaaggttttaaattgtggttgtgccatatattgagaagaagaataatga |
315 |
Q |
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| T |
40553047 |
atggatgcacttcctcggttgatccaggttggttgactttcttgttattatcaaggttttaaattgtggttgtgccatatattgagaagaagaataatga |
40553146 |
T |
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| Q |
316 |
tcaaat |
321 |
Q |
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|||||| |
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| T |
40553147 |
tcaaat |
40553152 |
T |
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