View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2064_low_10 (Length: 462)
Name: NF2064_low_10
Description: NF2064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2064_low_10 |
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Alignment Details
Target: chr5 (Bit Score: 420; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 420; E-Value: 0
Query Start/End: Original strand, 1 - 443
Target Start/End: Original strand, 11960102 - 11960545
Alignment:
| Q |
1 |
gttcttgtggttgcatggaggtggtgcgaggtggatttcatgatgttgtggaagagggaaagaaagggagaagagattgtgataatgatgaggaatcact |
100 |
Q |
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| T |
11960102 |
gttcttgtggttgcatggaggtggtgcaaggtggatttcatgatgttgtggaagagggaaagaaagggagaagagattgtgataatgatgaggaatcact |
11960201 |
T |
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| Q |
101 |
tgttctctgtaaaattataatgttatattttgaagcttctcaaaaagacaataataaaccaatataatttggtgcaaaaggaaaattgattgtgtttgtt |
200 |
Q |
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| T |
11960202 |
tgttctctgtaaaattataatgttatattttgaagcttctcaaaaagacaataataaaccaatataatttggtgcaaaaggaaaattgtttgtgtttgtt |
11960301 |
T |
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| Q |
201 |
ggtgatgaaaaaacttggaagtgtattttgacaacaatgctggatttgtatgtgttttcccaagagttgtttgtggtttggcagcggtggtgtgtggcga |
300 |
Q |
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| T |
11960302 |
ggtgatgaaaaaacttggaagtgtattttgacaacaatgctggatttgtatgtgttttcccaagagttgtttgtggtttggcagcggtggtgtgtggcga |
11960401 |
T |
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| Q |
301 |
a-tagcagtggaaaaaatcttgctagtttcagggatagtcataaattcataatgatgttttggagaagattaaaggatgaagttggtggtgttaactttt |
399 |
Q |
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| T |
11960402 |
agtggcagtggaaaaaatcttgctagtttcagggatagtcataaattcatgatgatgttttggagaagattaaaggatgaagttggtggtgttaactttt |
11960501 |
T |
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| Q |
400 |
tagtttaattttaaatttccaatttttacatccctatcaaactg |
443 |
Q |
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| T |
11960502 |
tagtttaattttaaatttccaatttttacatccctatcaaactg |
11960545 |
T |
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