View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2064_low_19 (Length: 338)
Name: NF2064_low_19
Description: NF2064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2064_low_19 |
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Alignment Details
Target: chr4 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 19 - 297
Target Start/End: Original strand, 37879466 - 37879744
Alignment:
| Q |
19 |
cagctttatcaagcgtttcatcaacagtctttcgttttcccaaagcaacttgtagagaatgcgaaccgtcatcgacggcagaagaagaagaaggatattg |
118 |
Q |
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| T |
37879466 |
cagctttatcaagcgtttcatcaacagtctttcgttttcccaaagcaacttgtagagaatgcgaaccgtcatcaacggcagaagaagaagaaggatattg |
37879565 |
T |
|
| Q |
119 |
attatgagggtaaggaacagcaccagctttcaccaagaaatcttcaagagtaacttcatcaccaccaccggcaccgcaagcagaaaaaccttcatcagaa |
218 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37879566 |
atgatgagggtaaggaacagcaccagctttcaccaagaaatcttcaagagtaacttcatcaccaccaccggcaccgcaagcagaaaaaccttcatcagaa |
37879665 |
T |
|
| Q |
219 |
gaaggatgatgataatgttgttgatgatgaagatggtttgcaccaccatcagcgacgatgtccgtccaaacatcgtcaa |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37879666 |
gaaggatgatgataatgttgttgatgatgaagatggtttgcaccaccatcagcgacgatgtccgtccaaacatcgtcaa |
37879744 |
T |
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