View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2064_low_4 (Length: 633)

Name: NF2064_low_4
Description: NF2064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2064_low_4
NF2064_low_4
[»] chr3 (37 HSPs)
chr3 (272-620)||(34949752-34950100)
chr3 (273-620)||(22407019-22407366)
chr3 (273-620)||(45539206-45539553)
chr3 (274-618)||(4199633-4199977)
chr3 (275-620)||(2388808-2389153)
chr3 (274-620)||(42606456-42606802)
chr3 (275-617)||(36899433-36899775)
chr3 (274-620)||(46689858-46690204)
chr3 (455-620)||(27475477-27475642)
chr3 (273-375)||(46689679-46689781)
chr3 (273-390)||(36899251-36899368)
chr3 (272-375)||(42606276-42606379)
chr3 (273-375)||(45539630-45539732)
chr3 (281-375)||(2388637-2388731)
chr3 (274-361)||(27475388-27475475)
chr3 (274-375)||(4199451-4199552)
chr3 (273-390)||(22406839-22406957)
chr3 (275-390)||(27475704-27475820)
chr3 (275-390)||(34950162-34950278)
chr3 (273-364)||(48868588-48868680)
chr3 (275-365)||(20831101-20831192)
chr3 (273-366)||(20826725-20826819)
chr3 (328-390)||(35300797-35300859)
chr3 (321-389)||(48867696-48867764)
chr3 (281-369)||(54588461-54588551)
chr3 (276-358)||(25770494-25770577)
chr3 (276-364)||(3799722-3799811)
chr3 (272-364)||(47342742-47342835)
chr3 (321-364)||(9217866-9217909)
chr3 (321-364)||(33225534-33225577)
chr3 (321-364)||(47343726-47343769)
chr3 (321-364)||(51755915-51755958)
chr3 (321-374)||(54589566-54589620)
chr3 (329-366)||(7248488-7248525)
chr3 (328-365)||(51587582-51587619)
chr3 (273-364)||(43933437-43933529)
chr3 (276-351)||(51505955-51506031)
[»] chr6 (26 HSPs)
chr6 (273-620)||(33107106-33107453)
chr6 (273-620)||(34984292-34984636)
chr6 (281-620)||(6162433-6162772)
chr6 (274-620)||(15147894-15148240)
chr6 (273-620)||(14257323-14257670)
chr6 (273-620)||(20824340-20824687)
chr6 (433-618)||(20227740-20227923)
chr6 (433-618)||(22121724-22121907)
chr6 (274-375)||(14257145-14257246)
chr6 (275-375)||(20824163-20824263)
chr6 (273-375)||(15147715-15147817)
chr6 (281-390)||(33106934-33107044)
chr6 (311-375)||(20228225-20228289)
chr6 (311-375)||(22122209-22122273)
chr6 (281-375)||(6162250-6162344)
chr6 (273-369)||(20522152-20522248)
chr6 (281-392)||(20227062-20227173)
chr6 (281-392)||(22121046-22121157)
chr6 (321-374)||(20521231-20521284)
chr6 (321-364)||(5974057-5974100)
chr6 (276-358)||(14712830-14712913)
chr6 (321-364)||(19595650-19595693)
chr6 (274-355)||(4510186-4510268)
chr6 (321-374)||(19579193-19579246)
chr6 (321-364)||(8710341-8710384)
chr6 (274-334)||(17157717-17157778)
[»] chr4 (50 HSPs)
chr4 (275-620)||(12922641-12922986)
chr4 (273-620)||(43979734-43980081)
chr4 (274-620)||(789893-790239)
chr4 (274-620)||(30545891-30546237)
chr4 (273-620)||(1317237-1317584)
chr4 (274-620)||(40841638-40841984)
chr4 (275-620)||(46262634-46262979)
chr4 (273-620)||(28957308-28957655)
chr4 (275-620)||(31227878-31228223)
chr4 (321-620)||(28505386-28505685)
chr4 (274-618)||(21235208-21235551)
chr4 (276-620)||(38025676-38026020)
chr4 (273-620)||(2669004-2669351)
chr4 (283-620)||(55347737-55348051)
chr4 (275-375)||(28957732-28957832)
chr4 (276-375)||(31228300-31228399)
chr4 (275-375)||(2669428-2669528)
chr4 (274-375)||(38026097-38026198)
chr4 (281-377)||(12108277-12108373)
chr4 (275-375)||(40841461-40841561)
chr4 (273-390)||(12923048-12923166)
chr4 (275-375)||(28505208-28505308)
chr4 (275-375)||(21235027-21235127)
chr4 (281-369)||(55347566-55347654)
chr4 (273-368)||(30545710-30545806)
chr4 (275-390)||(46263041-46263157)
chr4 (275-377)||(1317059-1317162)
chr4 (281-364)||(12107711-12107794)
chr4 (275-390)||(43979556-43979672)
chr4 (273-387)||(54167491-54167606)
chr4 (275-390)||(790301-790417)
chr4 (276-387)||(54142325-54142437)
chr4 (321-392)||(17288346-17288417)
chr4 (321-392)||(47053807-47053878)
chr4 (321-392)||(54143474-54143545)
chr4 (273-387)||(54168801-54168916)
chr4 (328-365)||(47058507-47058544)
chr4 (321-392)||(17287533-17287604)
chr4 (276-357)||(10580040-10580122)
chr4 (328-364)||(49424507-49424543)
chr4 (281-351)||(3296722-3296793)
chr4 (321-364)||(3296945-3296988)
chr4 (321-364)||(29691571-29691614)
chr4 (281-351)||(35166708-35166779)
chr4 (321-392)||(49426325-49426396)
chr4 (328-358)||(29691746-29691776)
chr4 (323-364)||(30953002-30953043)
chr4 (321-374)||(34129291-34129344)
chr4 (324-364)||(3296592-3296632)
chr4 (71-123)||(32924850-32924902)
[»] chr2 (47 HSPs)
chr2 (275-620)||(3854243-3854588)
chr2 (273-620)||(12089871-12090218)
chr2 (326-620)||(22701689-22701984)
chr2 (273-620)||(34037806-34038153)
chr2 (273-620)||(1804229-1804576)
chr2 (275-618)||(39096523-39096866)
chr2 (274-620)||(6476263-6476609)
chr2 (276-620)||(26525640-26525984)
chr2 (273-620)||(11450753-11451100)
chr2 (275-620)||(27377825-27378170)
chr2 (310-617)||(38110019-38110318)
chr2 (273-375)||(1804653-1804755)
chr2 (273-375)||(11451177-11451279)
chr2 (274-375)||(6476085-6476186)
chr2 (274-375)||(27377647-27377748)
chr2 (274-375)||(39096947-39097048)
chr2 (283-375)||(18105723-18105816)
chr2 (276-390)||(26525462-26525576)
chr2 (275-390)||(3854065-3854181)
chr2 (281-375)||(38110398-38110489)
chr2 (274-390)||(12089692-12089809)
chr2 (273-367)||(10709472-10709567)
chr2 (273-367)||(39947084-39947179)
chr2 (273-374)||(23221831-23221933)
chr2 (309-368)||(22701545-22701605)
chr2 (273-375)||(10708020-10708123)
chr2 (275-390)||(34038227-34038342)
chr2 (274-374)||(2036594-2036695)
chr2 (273-365)||(44929980-44930073)
chr2 (321-366)||(44934682-44934727)
chr2 (273-392)||(39945839-39945959)
chr2 (274-364)||(2035606-2035697)
chr2 (276-358)||(24093329-24093412)
chr2 (273-330)||(22704420-22704477)
chr2 (328-374)||(18107416-18107462)
chr2 (281-358)||(32861047-32861125)
chr2 (330-367)||(10710828-10710865)
chr2 (321-353)||(3624925-3624957)
chr2 (281-364)||(7083527-7083611)
chr2 (321-364)||(2517459-2517502)
chr2 (321-364)||(21216969-21217012)
chr2 (321-364)||(21217322-21217365)
chr2 (321-364)||(21265037-21265080)
chr2 (321-364)||(21265390-21265433)
chr2 (321-392)||(23222836-23222907)
chr2 (321-355)||(24093202-24093236)
chr2 (321-354)||(3691400-3691433)
[»] chr7 (24 HSPs)
chr7 (274-620)||(28898027-28898373)
chr7 (273-620)||(1244188-1244535)
chr7 (273-620)||(41298421-41298768)
chr7 (272-620)||(33848042-33848390)
chr7 (276-620)||(29783935-29784279)
chr7 (274-618)||(18443356-18443700)
chr7 (274-620)||(22954044-22954390)
chr7 (491-620)||(884859-884988)
chr7 (273-375)||(33847863-33847965)
chr7 (276-375)||(18443176-18443275)
chr7 (273-375)||(29784369-29784471)
chr7 (275-377)||(41298243-41298346)
chr7 (273-390)||(884679-884797)
chr7 (273-390)||(1244008-1244126)
chr7 (273-390)||(28898435-28898553)
chr7 (273-366)||(30939563-30939657)
chr7 (276-366)||(27310047-27310138)
chr7 (321-365)||(27311048-27311092)
chr7 (272-366)||(4152716-4152811)
chr7 (321-364)||(17075618-17075661)
chr7 (275-364)||(28852692-28852782)
chr7 (275-355)||(20543910-20543991)
chr7 (321-358)||(20544145-20544182)
chr7 (323-364)||(32092530-32092571)
[»] chr1 (40 HSPs)
chr1 (276-620)||(30427850-30428194)
chr1 (273-620)||(17968034-17968381)
chr1 (273-620)||(45230306-45230653)
chr1 (273-620)||(46802498-46802845)
chr1 (274-620)||(47410421-47410767)
chr1 (274-620)||(32266659-32267005)
chr1 (274-620)||(40124252-40124598)
chr1 (276-620)||(9122861-9123205)
chr1 (128-264)||(11032541-11032677)
chr1 (17-130)||(11006271-11006384)
chr1 (274-375)||(32266481-32266582)
chr1 (274-375)||(46802320-46802421)
chr1 (275-375)||(47410844-47410944)
chr1 (46-231)||(10931577-10931758)
chr1 (274-375)||(9122683-9122784)
chr1 (274-375)||(40124074-40124175)
chr1 (294-367)||(8997359-8997432)
chr1 (54-139)||(11043361-11043446)
chr1 (274-390)||(30427671-30427788)
chr1 (275-390)||(45230128-45230244)
chr1 (69-145)||(10908305-10908383)
chr1 (46-123)||(10977090-10977167)
chr1 (17-74)||(11032468-11032525)
chr1 (274-368)||(17968465-17968560)
chr1 (274-366)||(1500980-1501073)
chr1 (273-385)||(36793554-36793667)
chr1 (273-374)||(45664684-45664786)
chr1 (272-387)||(36792236-36792351)
chr1 (276-364)||(37717797-37717885)
chr1 (169-233)||(11042777-11042841)
chr1 (273-356)||(12869663-12869747)
chr1 (276-358)||(3591171-3591254)
chr1 (281-388)||(36297527-36297634)
chr1 (321-363)||(12868479-12868521)
chr1 (322-360)||(31889481-31889519)
chr1 (321-366)||(1500105-1500150)
chr1 (321-364)||(5172791-5172834)
chr1 (336-368)||(8998232-8998264)
chr1 (273-352)||(19895397-19895477)
chr1 (330-358)||(19895628-19895656)
[»] chr5 (38 HSPs)
chr5 (273-620)||(31093172-31093519)
chr5 (275-620)||(3878949-3879294)
chr5 (283-620)||(21949576-21949913)
chr5 (273-620)||(28641158-28641505)
chr5 (273-614)||(3191982-3192323)
chr5 (273-618)||(39402209-39402554)
chr5 (273-620)||(5746758-5747105)
chr5 (273-620)||(6543591-6543937)
chr5 (275-620)||(31162597-31162942)
chr5 (273-375)||(5747182-5747284)
chr5 (273-375)||(6543412-6543514)
chr5 (276-375)||(21949400-21949499)
chr5 (274-375)||(31162419-31162520)
chr5 (275-375)||(28641582-28641682)
chr5 (275-369)||(39402641-39402735)
chr5 (275-375)||(3191797-3191897)
chr5 (273-390)||(3878769-3878887)
chr5 (273-374)||(14625119-14625220)
chr5 (273-367)||(19353067-19353162)
chr5 (274-374)||(4186752-4186853)
chr5 (321-374)||(14626080-14626133)
chr5 (274-366)||(31092993-31093086)
chr5 (321-369)||(119056-119104)
chr5 (321-375)||(119948-120002)
chr5 (275-375)||(19352298-19352399)
chr5 (273-363)||(119181-119272)
chr5 (321-375)||(19353228-19353282)
chr5 (321-366)||(19352517-19352562)
chr5 (281-365)||(30351704-30351789)
chr5 (328-375)||(718214-718261)
chr5 (321-363)||(119786-119828)
chr5 (321-358)||(3406692-3406729)
chr5 (321-365)||(30350647-30350691)
chr5 (281-392)||(37813380-37813492)
chr5 (321-364)||(87262-87305)
chr5 (321-392)||(4187809-4187880)
chr5 (320-357)||(8647358-8647395)
chr5 (321-353)||(38834790-38834822)
[»] chr8 (27 HSPs)
chr8 (274-620)||(12734171-12734517)
chr8 (273-618)||(29917102-29917447)
chr8 (441-618)||(42253302-42253479)
chr8 (274-375)||(29917528-29917629)
chr8 (281-391)||(12734578-12734689)
chr8 (273-369)||(24845960-24846056)
chr8 (275-374)||(36155270-36155370)
chr8 (328-375)||(4624413-4624460)
chr8 (303-364)||(22601526-22601587)
chr8 (321-374)||(26720367-26720420)
chr8 (281-392)||(20682897-20683009)
chr8 (274-363)||(4694434-4694524)
chr8 (281-374)||(44148582-44148676)
chr8 (328-365)||(4624586-4624623)
chr8 (276-358)||(21005956-21006039)
chr8 (281-354)||(11089133-11089207)
chr8 (273-364)||(36156359-36156452)
chr8 (276-358)||(44024398-44024481)
chr8 (328-358)||(6297688-6297718)
chr8 (283-364)||(6297863-6297945)
chr8 (321-374)||(6297508-6297561)
chr8 (321-354)||(13315248-13315281)
chr8 (321-374)||(16662214-16662267)
chr8 (321-374)||(17914243-17914296)
chr8 (321-386)||(20682754-20682819)
chr8 (274-354)||(34614016-34614096)
chr8 (274-353)||(10047477-10047556)
[»] scaffold0085 (2 HSPs)
scaffold0085 (273-620)||(39418-39765)
scaffold0085 (273-375)||(39842-39944)
[»] scaffold0148 (2 HSPs)
scaffold0148 (321-392)||(29320-29391)
scaffold0148 (321-365)||(32994-33038)
[»] scaffold0009 (2 HSPs)
scaffold0009 (276-354)||(107895-107974)
scaffold0009 (321-364)||(107768-107811)


Alignment Details
Target: chr3 (Bit Score: 301; Significance: 1e-169; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 272 - 620
Target Start/End: Original strand, 34949752 - 34950100
Alignment:
Q  272 gaagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctg 371  Q
    |||||||| |||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||| |    
T  34949752 gaagggttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccg 34949851  T
Q  372 ttagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttc 471  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34949852 ttagtgcaattggtccctgccatcagtgccatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttc 34949951  T
Q  472 cacaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaac 571  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34949952 cacacccgcaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaac 34950051  T
Q  572 accggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  34950052 accggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 34950100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 273 - 620
Target Start/End: Complemental strand, 22407366 - 22407019
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||  || ||||||| | |||||||||||||||||| |||||||||||||||||||||||||| ||| ||    
T  22407366 aagggttaaatatgtttttggtccctacattttgcgcaattttgaaaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgt 22407267  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22407266 tagtgcaattggtccctgccatcagtgccatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 22407167  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  22407166 acacccgcaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccagaagtgtgacgaaca 22407067  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  22407066 ccggcgatccgcatctacgaagctgcggagaaagttcgtggtgaagtt 22407019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 273 - 620
Target Start/End: Original strand, 45539206 - 45539553
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| | |||||||||| ||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |  ||    
T  45539206 aagggttaattatgtttttggtccctacattttacgcgattttaagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcattcgt 45539305  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45539306 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaagccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 45539405  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| ||||| ||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  45539406 acacccgcaacagcaagcactttcaacgataacatcattgctttcggcctccaaatcttcccctctaaaccaacatatttcactagaaatgtgacgaaca 45539505  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||    
T  45539506 acggcgatccgcatctacgacgctgcggagaaagatcgtggtgaagtt 45539553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 274 - 618
Target Start/End: Complemental strand, 4199977 - 4199633
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  4199977 agggttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctatatttttcctccgtt 4199878  T
Q  374 agtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 473  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4199877 agtgcaattggtccctgccatcagtgccatgttgatgaaacacaagccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 4199778  T
Q  474 caccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacac 573  Q
    ||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| || |||||| ||||| |||||||||||    
T  4199777 cacccgcaacaacaagcgctttcaacgacaacatcatcgctttcggcctccaaatcttcccctctaaaccaatatttttcaccggaagcgtgacgaacac 4199678  T
Q  574 cggcgatccgcatctacgaagctgcggagaaagatcgtggtgaag 618  Q
    | |||||| |  ||||||| |||||||||||||||||||||||||    
T  4199677 cagcgatctgtgtctacgacgctgcggagaaagatcgtggtgaag 4199633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 275 - 620
Target Start/End: Complemental strand, 2389153 - 2388808
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||| |||||||||||| |||||| ||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||  ||||    
T  2389153 gggttaaatatgtttttggtccctatattttatgcaattttgagaatagtccctacattttaataaatgtttttaaaatccctacatttttccttcgtta 2389054  T
Q  375 gtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccac 474  Q
    ||||||||||||| |||||||| || ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  2389053 gtgcaattggtccgtgccatcactgccatgttgatgaaacacaagccatcctaacaagttcaaccccaccccaccaaatctccaccacaacaccttccat 2388954  T
Q  475 accctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacacc 574  Q
    |||| ||||  |||   |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       
T  2388953 acccgcaacggcaaaaactttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacgaacggt 2388854  T
Q  575 ggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  2388853 ggcgatccgcatctacgacgctgcggagaaagatcgtggtgaagtt 2388808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 274 - 620
Target Start/End: Complemental strand, 42606802 - 42606456
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||  |||    
T  42606802 agggttaaatatgtttttggtccctacattttatgcaattttgagaatagtccctacatttcaataaatatttttaaaatccctacatttttccttcgtt 42606703  T
Q  374 agtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 473  Q
    ||||||||||||| ||||||||| || |||||||||||||||||  ||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  42606702 agtgcaattggtctctgccatcactgccatgttgatgaaacacaaaccatcctaacaagttcaacctcaccccaccaaatctccaccacaacaccttcca 42606603  T
Q  474 caccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacac 573  Q
     |||  ||||  |||   |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||     
T  42606602 tacctgcaacggcaaaaactttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacgaacag 42606503  T
Q  574 cggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
     |||||||||||||||||| |||||||||||||||||||||||||||    
T  42606502 tggcgatccgcatctacgacgctgcggagaaagatcgtggtgaagtt 42606456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 275 - 617
Target Start/End: Complemental strand, 36899775 - 36899433
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||| |||||||||||| |||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||  ||||    
T  36899775 gggttaaatatgtttttggtccctatattttatgcaattttgagaatagtccctacatttcaataaatgtttttaaaatccctatatttttccttcgtta 36899676  T
Q  375 gtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccac 474  Q
    |||||||||||||||||||||| || ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  36899675 gtgcaattggtccctgccatcactgccatgttgatgaaacacaagccatcctaacaagttcaaccccaccccaccaaatctccaccacaacaccttccat 36899576  T
Q  475 accctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacacc 574  Q
    || | ||||  |||   |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||      
T  36899575 actcgcaacggcaaaaactttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacgaacagt 36899476  T
Q  575 ggcgatccgcatctacgaagctgcggagaaagatcgtggtgaa 617  Q
    || ||||||||||||||| |||| |||||||||||||||||||    
T  36899475 ggtgatccgcatctacgacgctgaggagaaagatcgtggtgaa 36899433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 274 - 620
Target Start/End: Complemental strand, 46690204 - 46689858
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |  |||    
T  46690204 agggttaaatatgtttttggtccctacattttacgcgattttgagaataatccctacatttcaataaatgtttttaaaatccctacatttttctttcgtt 46690105  T
Q  374 agtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 473  Q
     ||||||||||||| |||| ||| |||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  46690104 ggtgcaattggtccatgccttcaatgtcatattgatgaaacacaagccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttcca 46690005  T
Q  474 caccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacac 573  Q
    ||||| ||||||||| | |||| ||||||||||||||||| |||| |||||||||||| || ||||||||||||||||||| ||||| ||| ||||||||    
T  46690004 cacccgcaacaacaaacacttttaacgataacatcatcgctttcgacctccaaatctttccatctaaaccaacatatttcattggaaatgtcacgaacac 46689905  T
Q  574 cggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||||||||||||||   |||||||||||| ||||||||||||    
T  46689904 cggcgatccgcatctacgacattgcggagaaagaccgtggtgaagtt 46689858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 455 - 620
Target Start/End: Original strand, 27475477 - 27475642
Alignment:
Q  455 tccaccacaacaccttccacaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttca 554  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  27475477 tccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaatcaacatatttca 27475576  T
Q  555 ctggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27475577 ccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 27475642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 273 - 375
Target Start/End: Original strand, 46689679 - 46689781
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  46689679 aagggttaaatatgtttttggttcctacattttatgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgt 46689778  T
Q  373 tag 375  Q
    |||    
T  46689779 tag 46689781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 273 - 390
Target Start/End: Original strand, 36899251 - 36899368
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  36899251 aagggttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgt 36899350  T
Q  373 tagtgcaattggtccctg 390  Q
    ||||| || | |||||||    
T  36899351 tagtgtaaatagtccctg 36899368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 272 - 375
Target Start/End: Original strand, 42606276 - 42606379
Alignment:
Q  272 gaagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctg 371  Q
    |||||||| ||| |||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  42606276 gaagggttaaatttgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccg 42606375  T
Q  372 ttag 375  Q
    ||||    
T  42606376 ttag 42606379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 273 - 375
Target Start/End: Complemental strand, 45539732 - 45539630
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  45539732 aagggttaaatatgtttttggtccctacattttacgcgattttaagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgt 45539633  T
Q  373 tag 375  Q
    |||    
T  45539632 tag 45539630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 281 - 375
Target Start/End: Original strand, 2388637 - 2388731
Alignment:
Q  281 aatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttag 375  Q
    |||||||||||| ||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  2388637 aatatgtttttggtccctacattttacgcgattttgagaatagtctctacatttcaataaatgtttttaaaatccctacattttttctccgttag 2388731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 274 - 361
Target Start/End: Original strand, 27475388 - 27475475
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacat 361  Q
    |||||| |||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  27475388 agggttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacat 27475475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 274 - 375
Target Start/End: Original strand, 4199451 - 4199552
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| ||||||||||||   ||||||||||| |||||| || |||||||||||||||||||||||||||||||||||| || |||    
T  4199451 agggttaaatatgtttttggtccctacattttgcacgattttgagaatagtccttatatttcaataaatgtttttaaaatccctacatttttcatccgtt 4199550  T
Q  374 ag 375  Q
    ||    
T  4199551 ag 4199552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 273 - 390
Target Start/End: Original strand, 22406839 - 22406957
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcctctg 371  Q
    ||||||| |||||||||||| ||| ||| ||||   ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||  |    
T  22406839 aagggttaaatatgtttttggtccttacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgag 22406938  T
Q  372 ttagtgcaattggtccctg 390  Q
    |||||| || | |||||||    
T  22406939 ttagtgtaaatagtccctg 22406957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 275 - 390
Target Start/End: Complemental strand, 27475820 - 27475704
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    ||||| |||||||||||| ||||||  |||||  ||||||||||| | ||||| || ||||||||||||||||||||||||||||||||||||||  |||    
T  27475820 gggttaaatatgtttttggtccctaagttttacacgattttgagaattagtccttatatttcaataaatgtttttaaaatccctacatttttcctgagtt 27475721  T
Q  374 agtgcaattggtccctg 390  Q
    |||| || | |||||||    
T  27475720 agtgtaaatagtccctg 27475704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 275 - 390
Target Start/End: Complemental strand, 34950278 - 34950162
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    ||||| |||||||||||| ||||||| ||||   | ||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||  |||    
T  34950278 gggttaaatatgtttttggtccctacgttttgcacaattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagtt 34950179  T
Q  374 agtgcaattggtccctg 390  Q
    |||| || | |||||||    
T  34950178 agtgtaaatagtccctg 34950162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 273 - 364
Target Start/End: Complemental strand, 48868680 - 48868588
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgag-agtagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    ||||||| |||||||| ||  ||||||||||||  || | |||||  | ||||||||||||||||||||||||||||||||||||||||||||    
T  48868680 aagggttaaatatgttattagtccctacattttgcgctactttgaataatagtccctacatttcaataaatgtttttaaaatccctacatttt 48868588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 275 - 365
Target Start/End: Complemental strand, 20831192 - 20831101
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgag-agtagtccctacatttcaataaatgtttttaaaatccctacattttt 365  Q
    ||||| |||||||||||| |||||||||||| |   ||||| |  | |||||| ||||||||||||||||||||||||||||||||||||||    
T  20831192 gggttaaatatgtttttggtccctacattttttctcattttaattaatagtccttacatttcaataaatgtttttaaaatccctacattttt 20831101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 273 - 366
Target Start/End: Original strand, 20826725 - 20826819
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgag-agtagtccctacatttcaataaatgtttttaaaatccctacatttttc 366  Q
    ||||||| |||||||||||| ||||||||||||     ||||| |  | |||||| |||||||||||||||||||||||||||||||||||||||    
T  20826725 aagggttaaatatgtttttggtccctacatttttcctcattttaattaatagtccttacatttcaataaatgtttttaaaatccctacatttttc 20826819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 328 - 390
Target Start/End: Original strand, 35300797 - 35300859
Alignment:
Q  328 tacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgcaattggtccctg 390  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||  ||| |||||||||    
T  35300797 tacatttcaataaatgtttttaaaatccctacatttttcatccgttagcacaaatggtccctg 35300859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 321 - 389
Target Start/End: Original strand, 48867696 - 48867764
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgcaattggtccct 389  Q
    |||||||||||||||||||||| |||||||||||| |||||||| | || |||| | ||||||||||||    
T  48867696 tagtccctacatttcaataaatatttttaaaatccttacattttacttccgttaatacaattggtccct 48867764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 281 - 369
Target Start/End: Original strand, 54588461 - 54588551
Alignment:
Q  281 aatatgtttttgatccctacattttatgc-gattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctc 369  Q
    |||||||||| | ||||||||||||  || || ||||| || |||||| |||||||||||||||||||||||||| |||||||||| ||||    
T  54588461 aatatgttttcggtccctacatttttggcagactttgaagaatagtccatacatttcaataaatgtttttaaaattcctacattttacctc 54588551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 276 - 358
Target Start/End: Original strand, 25770494 - 25770577
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttgagag-tagtccctacatttcaataaatgtttttaaaatcccta 358  Q
    |||| ||||||||||| |||| ||||||||  | |||||||| |  |||||  |||||||||||||||||||||||||||||||    
T  25770494 ggttaaatatgtttttaatccttacattttgcgtgattttgaaaaatagtctttacatttcaataaatgtttttaaaatcccta 25770577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 276 - 364
Target Start/End: Original strand, 3799722 - 3799811
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttgagag-tagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||| ||||| |||||  ||||||||||||| ||  |||||| |  ||||| |||||||| | |||||||||||||||||||||||||||    
T  3799722 ggttaaatatctttttagtccctacattttacgctcttttgataaatagtctctacatttaagtaaatgtttttaaaatccctacatttt 3799811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 272 - 364
Target Start/End: Original strand, 47342742 - 47342835
Alignment:
Q  272 gaagggttcaatatgtttttgatccctacattttatgcgattttgagag-tagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||||| |||||||||||  | |||| |||||| || ||||||| |  |||||||||||||| | ||||||||||||||||| ||| |||||    
T  47342742 gaagggttaaatatgtttttagttcctaaattttacgctattttgataaatagtccctacatttaagtaaatgtttttaaaatcactatatttt 47342835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 9217866 - 9217909
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||||||||||||| ||||||||||||||||||  |||||||    
T  9217866 tagtccctacatttcattaaatgtttttaaaatcctcacatttt 9217909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 33225534 - 33225577
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||||||||||| | ||||||||||||||||||| |||||||    
T  33225534 tagtccctacatttaagtaaatgtttttaaaatccccacatttt 33225577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 47343769 - 47343726
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    ||||| |||||||| | |||||||||||||||||||||||||||    
T  47343769 tagtctctacatttaagtaaatgtttttaaaatccctacatttt 47343726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 51755958 - 51755915
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||||||||||||| ||||||||||||||||||  |||||||    
T  51755958 tagtccctacatttcattaaatgtttttaaaatcctcacatttt 51755915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 321 - 374
Target Start/End: Complemental strand, 54589620 - 54589566
Alignment:
Q  321 tagtccctacatttcaataaa-tgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||||||| ||||||| ||| | |||||||||||||||||||||||||| ||||    
T  54589620 tagtccctatatttcaaaaaaatatttttaaaatccctacatttttcctccgtta 54589566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 366
Target Start/End: Complemental strand, 7248525 - 7248488
Alignment:
Q  329 acatttcaataaatgtttttaaaatccctacatttttc 366  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  7248525 acattttaataaatatttttaaaatccctacatttttc 7248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 365
Target Start/End: Original strand, 51587582 - 51587619
Alignment:
Q  328 tacatttcaataaatgtttttaaaatccctacattttt 365  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  51587582 tacatttcaataaatatttttaaaatccctatattttt 51587619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 273 - 364
Target Start/End: Original strand, 43933437 - 43933529
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    ||||||| ||||| |||||  ||| |||||||| |||   ||||| || |||||||||||||||| ||||| ||||||||||||  |||||||    
T  43933437 aagggttaaatatatttttagtccttacattttgtgcccgtttgaagaatagtccctacatttcattaaatatttttaaaatcctcacatttt 43933529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 276 - 351
Target Start/End: Original strand, 51505955 - 51506031
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttgagag-tagtccctacatttcaataaatgtttttaaa 351  Q
    |||| ||||| ||||| |||||||||||||| ||  |||||| |  |||||||||||||| | ||||||||||||||    
T  51505955 ggttaaatatatttttaatccctacattttacgctcttttgataaatagtccctacatttaagtaaatgtttttaaa 51506031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 300; Significance: 1e-168; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 273 - 620
Target Start/End: Complemental strand, 33107453 - 33107106
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||| ||    
T  33107453 aagggttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgt 33107354  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33107353 tagtgcaattggtccctgccatcagtgccatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 33107254  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33107253 acacccgcaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaaca 33107154  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33107153 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 33107106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 273 - 620
Target Start/End: Complemental strand, 34984636 - 34984292
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||| ||    
T  34984636 aagggttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaataaatgtttttaaaatcc-tacattttttctccgt 34984538  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    ||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  34984537 tagtgcaattggtccctgccatcagtgccatgttgatgaaaca--ggccatcataacaagttcaaccccaccccaccaaatctccaccacaacacattcc 34984440  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| |||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34984439 acacccgcaacaacaagtgttttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaaca 34984340  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34984339 ccggcgatccgcatctacgaagctgcggagaaagatcatggtgaagtt 34984292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 281 - 620
Target Start/End: Complemental strand, 6162772 - 6162433
Alignment:
Q  281 aatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgcaa 380  Q
    |||||||||||| ||||||||||||  |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  6162772 aatatgtttttggtccctacattttgcgcgattttgagaatagtctctacatttcaataaatgtttttaaaatccctacattttttctccgttagtgcaa 6162673  T
Q  381 ttggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacaccctc 480  Q
    ||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  6162672 ttggtccctgccatcagtgccatgttgatgaaacgcaagccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgc 6162573  T
Q  481 aacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgat 580  Q
    |||| |||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  6162572 aacagcaagcgctttcaacgataacatcatcactttcggcctccaaatctttccctctaaaccaacatatttcactggaagcgtgacgaacaccgacgat 6162473  T
Q  581 ccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  6162472 ccgcatctacgacgctgcggagaaagatcgtggtgaagtt 6162433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 274 - 620
Target Start/End: Complemental strand, 15148240 - 15147894
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| |||||| |||||| || ||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||  |||    
T  15148240 agggttaaatatgtttttggtccctatattttacgcaattttgataatagtccctacatttcaataaatgattttaaaatccctacatttttccttcgtt 15148141  T
Q  374 agtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 473  Q
     |||||||||||||||||||||| || ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15148140 ggtgcaattggtccctgccatcactgccatgttgatgaaacacaagccatcataaaaagttcaaccccaccccaccaaatctccaccacaacaccttcca 15148041  T
Q  474 caccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacac 573  Q
    ||||| ||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||    
T  15148040 cacccgcaacaacaagcactttcaacgataacatcatcgctttcggcctcaaaatcttcccctctaaaccaacatatttcactggaaatctgacgaacac 15147941  T
Q  574 cggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  15147940 cggcgatccgcatctacgatgctgcggagaaagatcgtggtaaagtt 15147894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 273 - 620
Target Start/End: Complemental strand, 14257670 - 14257323
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| |||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  14257670 aagggttaaatatgtttttggtccctatattttatgcaattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttccttcgt 14257571  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  14257570 tagtgcaattggtccctgccatcagtgccatgttgatgaaacacaagccatcctgacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 14257471  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    | |||| ||||  |||   |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  14257470 atacccgcaacggcaaaaactttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacaaaca 14257371  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
      |||||||||||||||||| |||||||||||||||||||||||||||    
T  14257370 gtggcgatccgcatctacgacgctgcggagaaagatcgtggtgaagtt 14257323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 273 - 620
Target Start/End: Complemental strand, 20824687 - 20824340
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |  ||    
T  20824687 aagggttaaatatgtttttggtccctacattttacgcgattttgagaataatccctacatttcaataaatgtttttaaaatccctacatttttctttcgt 20824588  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    | |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20824587 tggtgcaattggtccctgccttcagtgtcatattgatgaaacacaagccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttcc 20824488  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| ||||| ||| | |||| ||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| ||| |||||||    
T  20824487 acacccgcaacagcaaacacttttaacgataacatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaaca 20824388  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||||||||||||||| | |||||||||||| ||||||||||||    
T  20824387 ccggcgatccgcatctacgacgttgcggagaaagaccgtggtgaagtt 20824340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 433 - 618
Target Start/End: Original strand, 20227740 - 20227923
Alignment:
Q  433 ttcaaccccaccccaccaaatctccaccacaacaccttccacaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttc 532  Q
    ||||||| ||||||| |||||||||||||  ||| |||  |||||| ||||| |||||||||||||||| ||||||||||| || || ||||||||| ||    
T  20227740 ttcaaccacaccccatcaaatctccacca--acaacttttacacccacaacagcaagcgctttcaacgacaacatcatcgcttttggactccaaatcctc 20227837  T
Q  533 ccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaag 618  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||| |  |||| || ||||| |||||||||| ||||||||    
T  20227838 ccctctaaaccaacaaatttcactggaagcgtgacgaacaccggcgatctgtgtctatgacgctgcagagaaagatcatggtgaag 20227923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 433 - 618
Target Start/End: Original strand, 22121724 - 22121907
Alignment:
Q  433 ttcaaccccaccccaccaaatctccaccacaacaccttccacaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttc 532  Q
    ||||||| ||||||| |||||||||||||  ||| |||  |||||| ||||| |||||||||||||||| ||||||||||| || || ||||||||| ||    
T  22121724 ttcaaccacaccccatcaaatctccacca--acaacttttacacccacaacagcaagcgctttcaacgacaacatcatcgcttttggactccaaatcctc 22121821  T
Q  533 ccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaag 618  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||| |  |||| || ||||| |||||||||| ||||||||    
T  22121822 ccctctaaaccaacaaatttcactggaagcgtgacgaacaccggcgatctgtgtctatgacgctgcagagaaagatcatggtgaag 22121907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 274 - 375
Target Start/End: Original strand, 14257145 - 14257246
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||    
T  14257145 agggttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgtt 14257244  T
Q  374 ag 375  Q
    ||    
T  14257245 ag 14257246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 275 - 375
Target Start/End: Original strand, 20824163 - 20824263
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||| |||||||||||| |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20824163 gggttaaatatgtttttggtccctacattttacacgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgtta 20824262  T
Q  375 g 375  Q
    |    
T  20824263 g 20824263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 273 - 375
Target Start/End: Original strand, 15147715 - 15147817
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||| ||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15147715 aagggttaaatatgtttttggtccctacattttacgcgatttagagaataatccctacatttcaataaatgtttttaaaatccctacatttttcctccgt 15147814  T
Q  373 tag 375  Q
    |||    
T  15147815 tag 15147817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 281 - 390
Target Start/End: Original strand, 33106934 - 33107044
Alignment:
Q  281 aatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgca 379  Q
    |||||||||||| ||||||| ||||   ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||  ||||||| |    
T  33106934 aatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagttagtgta 33107033  T
Q  380 attggtccctg 390  Q
    | | |||||||    
T  33107034 aatagtccctg 33107044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 311 - 375
Target Start/End: Complemental strand, 20228289 - 20228225
Alignment:
Q  311 attttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttag 375  Q
    ||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20228289 attttgagaatagttcctacattttaataaatgtttttaaaatccctacatttttcctctgttag 20228225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 311 - 375
Target Start/End: Complemental strand, 22122273 - 22122209
Alignment:
Q  311 attttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttag 375  Q
    ||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22122273 attttgagaatagttcctacattttaataaatgtttttaaaatccctacatttttcctctgttag 22122209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 281 - 375
Target Start/End: Original strand, 6162250 - 6162344
Alignment:
Q  281 aatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttag 375  Q
    |||||||||||  ||||||| ||||   | ||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||| |||||    
T  6162250 aatatgttttttgtccctacgttttgcacaattttgagaatagtcattacatttcaataaatgtttttaaaatccctacatttttcctccgttag 6162344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 273 - 369
Target Start/End: Complemental strand, 20522248 - 20522152
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctc 369  Q
    ||||||| |||||||||||| | ||||||||||   ||||||||| || |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  20522248 aagggttaaatatgtttttggttcctacattttga-cgattttgaagaatagtccctacatttcaataaatgtttttaaaatcactacattttacctc 20522152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 20227062 - 20227173
Alignment:
Q  281 aatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgcaa 380  Q
    ||||| |||||| || ||| |||||  |||||||||||| |||| |||| |||||||||||| |||||||||| |||| |||||| ||| |||| |||||    
T  20227062 aatatatttttgctctctatattttgcgcgattttgagaatagttcctatatttcaataaatatttttaaaattcctatattttttctccgttaatgcaa 20227161  T
Q  381 ttggtccctgcc 392  Q
    |||||| |||||    
T  20227162 ttggtctctgcc 20227173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 22121046 - 22121157
Alignment:
Q  281 aatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgcaa 380  Q
    ||||| |||||| || ||| |||||  |||||||||||| |||| |||| |||||||||||| |||||||||| |||| |||||| ||| |||| |||||    
T  22121046 aatatatttttgctctctatattttgcgcgattttgagaatagttcctatatttcaataaatatttttaaaattcctatattttttctccgttaatgcaa 22121145  T
Q  381 ttggtccctgcc 392  Q
    |||||| |||||    
T  22121146 ttggtctctgcc 22121157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 321 - 374
Target Start/End: Original strand, 20521231 - 20521284
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||||||| ||||||| |||||||||||||||||||||| |||||||| ||||    
T  20521231 tagtccctatatttcaaaaaatgtttttaaaatccctacaattttcctccgtta 20521284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 5974057 - 5974100
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||||||||||||| ||||||||||||||||||| |||||||    
T  5974057 tagtccctacatttcattaaatgtttttaaaatccccacatttt 5974100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 276 - 358
Target Start/End: Original strand, 14712830 - 14712913
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttgagag-tagtccctacatttcaataaatgtttttaaaatcccta 358  Q
    |||| |||||||||||| ||||||||||||  |  | ||||| |  |||||| |||||||||||||||||||||||||||||||    
T  14712830 ggttaaatatgtttttggtccctacattttgcgtcactttgaaaaatagtccttacatttcaataaatgtttttaaaatcccta 14712913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 19595693 - 19595650
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||||||||||||||||||| ||||||||||||||| |||||    
T  19595693 tagtccctacatttcaataaatatttttaaaatccctatatttt 19595650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 355
Target Start/End: Original strand, 4510186 - 4510268
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatcc 355  Q
    |||||| |||||||||||  ||| ||||||||| ||   ||||| || |||||||||||||||| ||||||||||||||||||    
T  4510186 agggttaaatatgtttttagtccttacattttacgcctatttgaagaatagtccctacatttcattaaatgtttttaaaatcc 4510268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 321 - 374
Target Start/End: Complemental strand, 19579246 - 19579193
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||| || ||||||||||||||||||||||||||||| |||||  ||||||||    
T  19579246 tagtctctgcatttcaataaatgtttttaaaatccctatattttatctctgtta 19579193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 8710384 - 8710341
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||| ||||||||| ||||||||||||||||||| |||||||    
T  8710384 tagtccttacatttcattaaatgtttttaaaatccccacatttt 8710341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Original strand, 17157717 - 17157778
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttg-agagtagtccctacattt 334  Q
    |||||| ||||||||||||||||||||||||| || || |||| ||| |||||| |||||||    
T  17157717 agggttaaatatgtttttgatccctacattttgtgtgactttgaagaatagtccttacattt 17157778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 298; Significance: 1e-167; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 275 - 620
Target Start/End: Original strand, 12922641 - 12922986
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||| |||||||||||| ||||||||||||  || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  12922641 gggttaaatatgtttttggtccctacattttgcgcaattttgagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgtta 12922740  T
Q  375 gtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccac 474  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12922741 gtgcaattggtccctgccatcagtgccatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccac 12922840  T
Q  475 accctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacacc 574  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12922841 acccgcaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacacc 12922940  T
Q  575 ggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  12922941 ggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 12922986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 273 - 620
Target Start/End: Complemental strand, 43980081 - 43979734
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||| ||    
T  43980081 aagggttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgt 43979982  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43979981 tagtgcaattggtctctgccatcagtgccatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 43979882  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43979881 acacccgcaacaacaagcgctttcaacgataacatcatcgttttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaaca 43979782  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43979781 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 43979734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 274 - 620
Target Start/End: Original strand, 789893 - 790239
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| ||||||||||||  || ||||||| | |||||| ||||||||||| |||||||||||||||||||||||||| ||| |||    
T  789893 agggttaaatatgtttttggtccctacattttgcgcaattttgaaaatagtccatacatttcaatgaatgtttttaaaatccctacattttttctccgtt 789992  T
Q  374 agtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 473  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  789993 agtgcaattggtccctgccatcagtgccatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 790092  T
Q  474 caccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacac 573  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  790093 cacccacaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccagaagtgtgacgaacac 790192  T
Q  574 cggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  790193 cggcgatccgcatctacgaagctgcggagaaagttcgtggtgaagtt 790239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 274 - 620
Target Start/End: Complemental strand, 30546237 - 30545891
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| ||||||||||||  |||||||||||| ||||| |||||||||||| ||| |||||||||||||||||||||| ||| |||    
T  30546237 agggttaaatatgtttttggtccctacattttgcgcgattttgagaatagtctctacatttcaatgaatatttttaaaatccctacattttttctccgtt 30546138  T
Q  374 agtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 473  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30546137 agtgcaattggtccctgccatcagtgtcatgttgatcaaacacaggccatcataacaagttcaaccccaccccaccaaatctccacaacaacaccttcca 30546038  T
Q  474 caccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacac 573  Q
    ||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30546037 cacccgcaacaacaagcgctttcaacgataacatcatcgctttcgacctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacac 30545938  T
Q  574 cggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  30545937 cggcgatccgcatctacgaagctgcagagaaagatcgtggtgaagtt 30545891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 273 - 620
Target Start/End: Complemental strand, 1317584 - 1317237
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| | ||||||||||  |||||||||| | |||||||||||||||||| |||||||||||||| ||||||||| | ||| ||    
T  1317584 aagggttaaatatgtttttggttcctacattttgcgcgattttgaaaatagtccctacatttcaatgaatgtttttaaaattcctacatttcttctccgt 1317485  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1317484 tagtgcaattggtccctgccatcagtgacatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaacttcc 1317385  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  1317384 acacccgcaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgaggaaca 1317285  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  1317284 ccggcgatccgcatctacgaagctgcggagaaagttcgtggtgaagtt 1317237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 274 - 620
Target Start/End: Complemental strand, 40841984 - 40841638
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| | |||||||||| ||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |  |||    
T  40841984 agggttaattatgtttttggtccctacattttacgcgattttaagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcattcgtt 40841885  T
Q  374 agtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 473  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40841884 agtgcaattggtccctgccatcagtgtcatgttgatgaaacacaagccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 40841785  T
Q  474 caccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacac 573  Q
    ||||| ||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||     
T  40841784 cacccgcaacagcaagcactttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcactagaaatgtgacgaacaa 40841685  T
Q  574 cggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||    
T  40841684 cggcgatccgcatctacgacgctgcggagaaagatcgtggcgaagtt 40841638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 275 - 620
Target Start/End: Original strand, 46262634 - 46262979
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||| |||||||||||| ||||||||||||  || ||||||| | |||||||||||||||||| ||||||||||||||  |||||||||| ||| ||||    
T  46262634 gggttaaatatgtttttggtccctacattttgcgcaattttgaaaatagtccctacatttcaatgaatgtttttaaaatttctacattttttctccgtta 46262733  T
Q  375 gtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccac 474  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  46262734 gtgcaattggtccctgccatcagtgccatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccgccacaacaccttccac 46262833  T
Q  475 accctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacacc 574  Q
    |||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  46262834 acccgcaacaacaagcactttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccagaagtgtgacgaacacc 46262933  T
Q  575 ggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  46262934 ggcgatccgcatctacgaagctgcggagaaagttcgtggtgaagtt 46262979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 273 - 620
Target Start/End: Original strand, 28957308 - 28957655
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |  ||    
T  28957308 aagggttaaatatgtttttggtccctacattttacgcgattttgagaataatccctacatttcaataaatgtttttaaaatccctacatttttctttcgt 28957407  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    | |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28957408 tggtgcaattggtccctgccttcagtgtcatattgatgaaacacaagccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttcc 28957507  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| ||||| ||| | |||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| ||| |||||||    
T  28957508 acacccgcaacagcaaacactttcaacgataacatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaaca 28957607  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||||||||||||||| | |||||||||||| ||||||||||||    
T  28957608 ccggcgatccgcatctacgacgttgcggagaaagaccgtggtgaagtt 28957655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 275 - 620
Target Start/End: Original strand, 31227878 - 31228223
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |  |||     
T  31227878 gggttaaatatgtttttggtccctacattttacgcgattttgagaataatccctacatttcaataaatgtttttaaaatccctacatttttctttcgttg 31227977  T
Q  375 gtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccac 474  Q
    |||||||||||| ||||| || ||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31227978 gtgcaattggtctctgccttcggtgtcatattgatgaaacacaagccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttccac 31228077  T
Q  475 accctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacacc 574  Q
    |||| ||||| ||| | |||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| ||| |||||||||    
T  31228078 acccgcaacagcaaacactttcaacgataacatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacacc 31228177  T
Q  575 ggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||    
T  31228178 ggcgatccgcatctacgacgttgcggagaaagaccgtggtgaagtt 31228223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 321 - 620
Target Start/End: Complemental strand, 28505685 - 28505386
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggc 420  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||||| ||    
T  28505685 tagtccctacattttaataaatgtttttaaaatccctatatttttcctccgtcagtgcaattggtccctgccatcagtgccatgttgatgaaacacaagc 28505586  T
Q  421 catcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacaccctcaacaacaagcgctttcaacgataacatcatcgccttcggc 520  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||    
T  28505585 catcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgacaacatcatcgctttcggc 28505486  T
Q  521 ctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||||||||||||||||||||||| |||||| ||||| |||||||||||| ||||||||  ||||||| |||||||||||||||||||||||||||    
T  28505485 ctccaaatcttcccctctaaaccaacatttttcaccggaagcgtgacgaacaccagcgatccgtgtctacgatgctgcggagaaagatcgtggtgaagtt 28505386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 274 - 618
Target Start/End: Complemental strand, 21235551 - 21235208
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||  ||||||||||||   ||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  21235551 agggttaaatatgtttttc-tccctacattttgcacgattttgataatagtccctacatttcaataaatgtttttaaaatctctacatttttcctccgtt 21235453  T
Q  374 agtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 473  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21235452 agtgcaattggtccctaccatcagtgtcatgttgatgaaacacaagccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 21235353  T
Q  474 caccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacac 573  Q
    ||||| ||| | |||| ||||||||||| ||||||||| | |||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21235352 cacccgcaatagcaagtgctttcaacgacaacatcatcactttcggccctcaaatcttcccctctaaaccaacatatttcactggaagcgtgacgaacac 21235253  T
Q  574 cggcgatccgcatctacgaagctgcggagaaagatcgtggtgaag 618  Q
    || ||||| |  |||||||  ||||||||||||||||||||||||    
T  21235252 cgacgatctgtgtctacgatactgcggagaaagatcgtggtgaag 21235208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 276 - 620
Target Start/End: Original strand, 38025676 - 38026020
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttag 375  Q
    |||| ||||||| |||| ||||||||||||| || ||||||||| |||||| ||||||||||||||   ||||||||||||||||||||||||  |||||    
T  38025676 ggttaaatatgtctttggtccctacattttacgcaattttgagaatagtccttacatttcaataaaaaattttaaaatccctacatttttccttcgttag 38025775  T
Q  376 tgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccaca 475  Q
    ||||||||||| ||||| ||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38025776 tgcaattggtctctgccgtcactgccatgttgatgaaacacaagccatcataacaagttcaaccccaccccaccaaatctccaccacatcaccttccaca 38025875  T
Q  476 ccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccg 575  Q
    ||  ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||| || |||||||    
T  38025876 cctgcaacaacaagcactttcaacgataacatcatcgctttcggcctccaaatcttccccactaaaccaacatatttcactggaaatgtaacaaacaccg 38025975  T
Q  576 gcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||| ||||||||||  ||||||||||||||||||||||||||    
T  38025976 gcgatctgcatctacgacactgcggagaaagatcgtggtgaagtt 38026020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 273 - 620
Target Start/End: Original strand, 2669004 - 2669351
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||| || ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  2669004 aagggttaaatatgtttttggtccttatattttatgcaattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttccttcgt 2669103  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    ||||||||||| ||| |||||||| || ||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2669104 tagtgcaattgttccttgccatcactgccatgttgatgaaacacaagtcatcctaacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 2669203  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    | || | ||||  |||   |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2669204 atactcgcaacggcaaaaactttcaacgataacatcatcgcttttggcctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacgaaca 2669303  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
      ||| |||||||| ||||| |||||||||||||||||||||||||||    
T  2669304 gtggcaatccgcatatacgacgctgcggagaaagatcgtggtgaagtt 2669351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 283 - 620
Target Start/End: Complemental strand, 55348051 - 55347737
Alignment:
Q  283 tatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgcaatt 382  Q
    |||||||||| |||| |||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||        
T  55348051 tatgtttttggtcccaacattttacgcgattttaagaatagtccctacatttcaataaatgtttttaaaatccctacatt-ttccttcgttagtgc---- 55347957  T
Q  383 ggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacaccctcaa 482  Q
                      ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  55347956 ------------------catgttgatgaaacacaagccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaa 55347875  T
Q  483 caacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatcc 582  Q
    || ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||    
T  55347874 cagcaagcactttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaagatatttcactagaaatgtgacgaacaccggcgatcc 55347775  T
Q  583 gcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  55347774 gcatctacgaccctgcggagaaagatcgtggtgaagtt 55347737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 275 - 375
Target Start/End: Complemental strand, 28957832 - 28957732
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28957832 gggttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgtta 28957733  T
Q  375 g 375  Q
    |    
T  28957732 g 28957732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 276 - 375
Target Start/End: Complemental strand, 31228399 - 31228300
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttag 375  Q
    |||| |||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31228399 ggttaaatatgtttttgatccctacattttacgcgattttgagaatagttcctacatttcaataaatgtttttaaaatccctacatttttcctccgttag 31228300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 275 - 375
Target Start/End: Complemental strand, 2669528 - 2669428
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  2669528 gggttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgtta 2669429  T
Q  375 g 375  Q
    |    
T  2669428 g 2669428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 274 - 375
Target Start/End: Complemental strand, 38026198 - 38026097
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| | ||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  38026198 agggttaaatatgtttttggttcctacattttacgcaattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgtt 38026099  T
Q  374 ag 375  Q
    ||    
T  38026098 ag 38026097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 281 - 377
Target Start/End: Complemental strand, 12108373 - 12108277
Alignment:
Q  281 aatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtg 377  Q
    |||||||| ||| |||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12108373 aatatgttattggtccctaaattttatacgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctctgttagtg 12108277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 275 - 375
Target Start/End: Original strand, 40841461 - 40841561
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||| |||||||||||| ||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  40841461 gggttaaatatgtttttggtccctacattttacgcgattttaagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgtta 40841560  T
Q  375 g 375  Q
    |    
T  40841561 g 40841561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 273 - 390
Target Start/End: Complemental strand, 12923166 - 12923048
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcctctg 371  Q
    |||||||||||||||||||| |||||||||||| | ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||  |    
T  12923166 aagggttcaatatgtttttggtccctacattttgtacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgag 12923067  T
Q  372 ttagtgcaattggtccctg 390  Q
    |||||| || | |||||||    
T  12923066 ttagtgtaaatagtccctg 12923048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 275 - 375
Target Start/End: Original strand, 28505208 - 28505308
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||| |||||||||||| ||||||||||||   ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  28505208 gggttaaatatgtttttggtccctacattttgcacgattttgagaatagtccttacatttcaataaatgtttttaaaatccctacatttttcctccgtta 28505307  T
Q  375 g 375  Q
    |    
T  28505308 g 28505308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 275 - 375
Target Start/End: Original strand, 21235027 - 21235127
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||| |||||||||||| ||||||||||||   ||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  21235027 gggttaaatatgtttttggtccctacattttgcacgattttgataatagtccttacatttcaataaatgtttttaaaatccctacatttttcctccgtta 21235126  T
Q  375 g 375  Q
    |    
T  21235127 g 21235127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 281 - 369
Target Start/End: Original strand, 55347566 - 55347654
Alignment:
Q  281 aatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctc 369  Q
    ||||| |||||| ||||||||||||| || ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  55347566 aatatatttttggtccctacattttacgcaattttgagaatagtccctacattttaataaatgtttttaaaatccctacatttttcctc 55347654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 273 - 368
Target Start/End: Original strand, 30545710 - 30545806
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcct 368  Q
    ||||||| |||||||||||| ||||||| ||||   ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||    
T  30545710 aagggttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcct 30545806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 275 - 390
Target Start/End: Complemental strand, 46263157 - 46263041
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    ||||| |||||||||||| ||||||| ||||   ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||  |||    
T  46263157 gggttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagtt 46263058  T
Q  374 agtgcaattggtccctg 390  Q
    |||| || | |||||||    
T  46263057 agtgtaaatagtccctg 46263041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 275 - 377
Target Start/End: Original strand, 1317059 - 1317162
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    ||||| |||||||||||| ||||||| ||||   ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||  |||    
T  1317059 gggttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagtt 1317158  T
Q  374 agtg 377  Q
    ||||    
T  1317159 agtg 1317162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 281 - 364
Target Start/End: Original strand, 12107711 - 12107794
Alignment:
Q  281 aatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||||||||| ||||||||||||| |||||||||||| || | ||||||||| ||||||||||| |||||||||||||||||    
T  12107711 aatatgtttttggtccctacattttacgcgattttgagaataatacctacattttaataaatgtttctaaaatccctacatttt 12107794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 275 - 390
Target Start/End: Original strand, 43979556 - 43979672
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    ||||| |||||||||||| ||||||  ||||   ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||  |||    
T  43979556 gggttaaatatgtttttggtccctatgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagtt 43979655  T
Q  374 agtgcaattggtccctg 390  Q
    |||| || | |||||||    
T  43979656 agtgtaaatagtccctg 43979672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 273 - 387
Target Start/End: Original strand, 54167491 - 54167606
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctg 371  Q
    ||||||| ||||||||||   ||||||||||||  | |||||| | || |||||| || ||||||||||||||||||||||||||||||||||| ||| |    
T  54167491 aagggttaaatatgttttaagtccctacattttgcgtgattttcaagaatagtccttatatttcaataaatgtttttaaaatccctacatttttactccg 54167590  T
Q  372 ttagtgcaattggtcc 387  Q
    ||||| ||||||||||    
T  54167591 ttagtacaattggtcc 54167606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 275 - 390
Target Start/End: Complemental strand, 790417 - 790301
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    ||||| |||||||||||| ||||||  ||||   ||||||||||| | ||||| |||||||||||||||||||||||||| ||||||||||||||  |||    
T  790417 gggttaaatatgtttttggtccctaagttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaattcctacatttttcctgagtt 790318  T
Q  374 agtgcaattggtccctg 390  Q
    |||| || | |||||||    
T  790317 agtgtaaatagtccctg 790301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 276 - 387
Target Start/End: Original strand, 54142325 - 54142437
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    |||| |||||||| ||  ||||||||||||  |||| ||||| || |||||| |||||||||||||||||||||||||||| ||||||||  ||| ||||    
T  54142325 ggttaaatatgttattagtccctacattttgcgcgactttgaagaatagtccatacatttcaataaatgtttttaaaatccttacattttctctccgtta 54142424  T
Q  375 gtgcaattggtcc 387  Q
    || ||||||||||    
T  54142425 gtacaattggtcc 54142437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 17288417 - 17288346
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgcaattggtccctgcc 392  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||  ||| | |||||||||||||||    
T  17288417 tagtccctacatttcaataaatgtttttaaaatccctacattttacttccattaatacaattggtccctgcc 17288346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 47053807 - 47053878
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgcaattggtccctgcc 392  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| || |||||  ||| | |||||||||    
T  47053807 tagtccttacatttcaataaatgtttttaaaatccctacatttttcatccgttagcacaaatagtccctgcc 47053878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 54143545 - 54143474
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgcaattggtccctgcc 392  Q
    |||||||||||||| |||||||||||||||||||| ||||||||  ||| |||| | |||||||||||||||    
T  54143545 tagtccctacattttaataaatgtttttaaaatccttacattttctctccgttactacaattggtccctgcc 54143474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 273 - 387
Target Start/End: Complemental strand, 54168916 - 54168801
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctg 371  Q
    ||||||| ||||||||||| ||||||| |||||  | || ||||| || || ||||||||||| ||||||| ||||||||||||||||||||||  | ||    
T  54168916 aagggttaaatatgtttttaatccctatattttgcgtgactttgaagaataatccctacattttaataaatatttttaaaatccctacatttttattttg 54168817  T
Q  372 ttagtgcaattggtcc 387  Q
    ||||| ||||| ||||    
T  54168816 ttagtacaatttgtcc 54168801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 328 - 365
Target Start/End: Complemental strand, 47058544 - 47058507
Alignment:
Q  328 tacatttcaataaatgtttttaaaatccctacattttt 365  Q
    ||||||||||||||||||||||||||||||||||||||    
T  47058544 tacatttcaataaatgtttttaaaatccctacattttt 47058507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 17287533 - 17287604
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgcaattggtccctgcc 392  Q
    |||||| ||||||||||||||| |||||||||| |||||||||| | || |||| | |||||||||| ||||    
T  17287533 tagtccttacatttcaataaatatttttaaaattcctacattttacttccgttaatacaattggtccttgcc 17287604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 276 - 357
Target Start/End: Original strand, 10580040 - 10580122
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttgagag-tagtccctacatttcaataaatgtttttaaaatccct 357  Q
    |||| |||||||||||| ||| ||||||||  | || ||||| |  |||||| ||||||||||||||||||||||||||||||    
T  10580040 ggttaaatatgtttttggtccatacattttgcgtgactttgaaaaatagtccttacatttcaataaatgtttttaaaatccct 10580122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 328 - 364
Target Start/End: Original strand, 49424507 - 49424543
Alignment:
Q  328 tacatttcaataaatgtttttaaaatccctacatttt 364  Q
    ||||| |||||||||||||||||||||||||||||||    
T  49424507 tacatatcaataaatgtttttaaaatccctacatttt 49424543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 351
Target Start/End: Original strand, 3296722 - 3296793
Alignment:
Q  281 aatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaa 351  Q
    ||||| |||||||||||||||||||  | || ||||| || |||||| ||||||| ||||||||||||||||    
T  3296722 aatatatttttgatccctacattttgcgtgactttgaagaatagtccttacattttaataaatgtttttaaa 3296793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 3296988 - 3296945
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||||||| ||||| |||||||||||||||||| ||||||||    
T  3296988 tagtccctacgtttcattaaatgtttttaaaatccttacatttt 3296945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 29691571 - 29691614
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||||||||||||| ||||||||||||||||||  |||||||    
T  29691571 tagtccctacatttcattaaatgtttttaaaatcctcacatttt 29691614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 351
Target Start/End: Complemental strand, 35166779 - 35166708
Alignment:
Q  281 aatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaa 351  Q
    ||||||| |||  |||||||||||||| ||| ||||| || |||||| ||||||| ||||||||||||||||    
T  35166779 aatatgtctttcgtccctacattttatacgactttgaagaatagtccttacattttaataaatgtttttaaa 35166708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 49426396 - 49426325
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgcaattggtccctgcc 392  Q
    |||||| ||||||||||||||| |||||||||||| |||||||| | || ||||   ||| |||||||||||    
T  49426396 tagtccttacatttcaataaatatttttaaaatccttacattttacttccgttaacacaaatggtccctgcc 49426325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 358
Target Start/End: Complemental strand, 29691776 - 29691746
Alignment:
Q  328 tacatttcaataaatgtttttaaaatcccta 358  Q
    |||||||||||||||||||||||||||||||    
T  29691776 tacatttcaataaatgtttttaaaatcccta 29691746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 364
Target Start/End: Complemental strand, 30953043 - 30953002
Alignment:
Q  323 gtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||||||||||| ||||||||||||||||||  |||||||    
T  30953043 gtccctacatttcattaaatgtttttaaaatcctaacatttt 30953002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 374
Target Start/End: Complemental strand, 34129344 - 34129291
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    |||||||||||||||| ||||| ||||||||||||  |||||||  ||||||||    
T  34129344 tagtccctacatttcattaaatatttttaaaatcctcacattttatctctgtta 34129291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 324 - 364
Target Start/End: Original strand, 3296592 - 3296632
Alignment:
Q  324 tccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    ||||||||||||| ||||||||||||||||||  |||||||    
T  3296592 tccctacatttcattaaatgtttttaaaatcctcacatttt 3296632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 32924902 - 32924850
Alignment:
Q  71 aaatgtttcctaatttgcatactaaggagaatttagcatctgaggaggaactt 123  Q
    |||||||||||||||||||||| ||||||| | | || ||||| |||||||||    
T  32924902 aaatgtttcctaatttgcatacgaaggagactctggcttctgaagaggaactt 32924850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 298; Significance: 1e-167; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 275 - 620
Target Start/End: Complemental strand, 3854588 - 3854243
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||| |||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  3854588 gggttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgtta 3854489  T
Q  375 gtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccac 474  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3854488 gtgcaattggtccctgccatcagtgccatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccac 3854389  T
Q  475 accctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacacc 574  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3854388 acccgcaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacacc 3854289  T
Q  575 ggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3854288 ggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 3854243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 273 - 620
Target Start/End: Complemental strand, 12090218 - 12089871
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||| ||||||  |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||| ||    
T  12090218 aagggttaaatatgtttttggtccctgcattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgt 12090119  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12090118 tagtgcaattggtccctgccatcagtgccatgttgatgaaacacaggccatcataacaagtttaaccccaccccaccaaatctccaccacaacaccttcc 12090019  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12090018 acacccgcaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaaca 12089919  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12089918 ccggcgatccgcatctacgaagctgcggagaaaaatcgtggtgaagtt 12089871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 326 - 620
Target Start/End: Complemental strand, 22701984 - 22701689
Alignment:
Q  326 cctacatttcaataaatgtttttaaaatccctacatttttc-ctctgttagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatc 424  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22701984 cctacatttcaatgaatgtttttaaaatccctacatttttttctccgttagtgcaattggtccctgccatcagtgccatgttgatgaaacacaggccatc 22701885  T
Q  425 ataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctcc 524  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  22701884 ataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaacaacaagcgctttcaacgataacatcatcgctttcggcctcc 22701785  T
Q  525 aaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22701784 aaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtgctgaagtt 22701689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 273 - 620
Target Start/End: Original strand, 34037806 - 34038153
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||| ||||||| || ||| |||||  |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||| ||    
T  34037806 aagggttaaatacgtttttggtctctatattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgt 34037905  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    ||||||||||||||||||||||||||| ||||||| ||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34037906 tagtgcaattggtccctgccatcagtgccatgttggtgaaacgtaagccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 34038005  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  34038006 acacccgcaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgcgacgaaca 34038105  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||| ||||||||||||||| ||||||||||||||||| |||||||||    
T  34038106 ccggtgatccgcatctacgacgctgcggagaaagatcgcggtgaagtt 34038153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 273 - 620
Target Start/End: Original strand, 1804229 - 1804576
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |  ||    
T  1804229 aagggttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttctttcgt 1804328  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    | |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  1804329 tggtgcaattggtccctgccttcagtgtcatattgatgaaacacaagccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttcc 1804428  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| ||||| ||| | |||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| ||| |||||||    
T  1804429 acacccgcaacagcaaacactttcaacgataacatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaaca 1804528  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||||||||||||||| | |||||||||||| ||||||||||||    
T  1804529 ccggcgatccgcatctacgacgttgcggagaaagaccgtggtgaagtt 1804576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 275 - 618
Target Start/End: Original strand, 39096523 - 39096866
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||| |||||||||||| |||||| ||||| ||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||| ||| ||||    
T  39096523 gggttaaatatgtttttggtccctatattttgtgcgattttgagaatagtccttacatttcaataaatgtttttaaaatccatacattttttctccgtta 39096622  T
Q  375 gtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccac 474  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39096623 gtgcaattggtccctgccatcagtgccatgttgatgaaacacaagccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccac 39096722  T
Q  475 accctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacacc 574  Q
    |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||    
T  39096723 acccgcaacaacaagcgctttcaacgacaacatcatcgctttcggcctccaaatcttcccctctaaaccaacatttttcaccggaagcgtgacgaacacc 39096822  T
Q  575 ggcgatccgcatctacgaagctgcggagaaagatcgtggtgaag 618  Q
     |||||||   ||||||| |||||| ||||||||||||||||||    
T  39096823 agcgatccatgtctacgacgctgcgaagaaagatcgtggtgaag 39096866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 274 - 620
Target Start/End: Complemental strand, 6476609 - 6476263
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |  |||    
T  6476609 agggttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcattcgtt 6476510  T
Q  374 agtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 473  Q
     |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6476509 ggtgcaattggtccctgccttcagtgtcatattgatgaaacacaagccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttcca 6476410  T
Q  474 caccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacac 573  Q
    ||||| ||||| ||| | |||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| ||| ||||||||    
T  6476409 cacccgcaacagcaaacactttcaacgataacatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacac 6476310  T
Q  574 cggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||||||||||| | |||||||||||| ||||||||||||    
T  6476309 cggcgatccgcatctacgacgttgcggagaaagaccgtggtgaagtt 6476263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 276 - 620
Target Start/End: Complemental strand, 26525984 - 26525640
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttag 375  Q
    |||| |||||||||||| ||||||||||||  |||||||||| | ||||||||| |||||||||||||||||||||||||||||| |||| ||| |||||    
T  26525984 ggttaaatatgtttttggtccctacattttgcgcgattttgataatagtccctatatttcaataaatgtttttaaaatccctacaatttttctccgttag 26525885  T
Q  376 tgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccaca 475  Q
    |||||||||||||| ||||||||| ||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26525884 tgcaattggtccctaccatcagtgccattttgatgaaacgcaagccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccaca 26525785  T
Q  476 ccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccg 575  Q
    ||| ||||| ||||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||  |||||||||||||||| ||    
T  26525784 cccgcaacagcaagcgctttcaatgataacatcatcgctttcggcctccaaatattcccctctaaaccaacatatttcatcggaagtgtgacgaacagcg 26525685  T
Q  576 gcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||    
T  26525684 gcgatccacatctacgacgctgcggagaaagatcgtggtgaagtt 26525640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 273 - 620
Target Start/End: Original strand, 11450753 - 11451100
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||| |||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| |  ||    
T  11450753 aagggttaaatatgtttttggtccctacattttacgcgattttgagaataatccctacatttcaataaatgttttaaaaatccctacatttttctttcgt 11450852  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    | |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11450853 tggtgcaattggtccctgccttcagtgtcatattgatgaaacacaagccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttcc 11450952  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| ||||| ||| | |||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| ||| |||||||    
T  11450953 acacccgcaacagcaaacactttcaacgataacatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaaca 11451052  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||||||||||||||| | |||||||||||| ||||||||||||    
T  11451053 ccggcgatccgcatctacgacgttgcggagaaagaccgtggtgaagtt 11451100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 275 - 620
Target Start/End: Complemental strand, 27378170 - 27377825
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| |  |||     
T  27378170 gggttaaatatgtttttggtccctacattttacgcgattttgagaataatccctacatttcaataaatgttttaaaaatccctacatttttctttcgttg 27378071  T
Q  375 gtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccac 474  Q
    |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27378070 gtgcaattggtccctgccttcagtgtcatattgatgaaacacaagccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttccac 27377971  T
Q  475 accctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacacc 574  Q
    |||| ||||| ||| | |||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||| ||||| ||| |||||||||    
T  27377970 acccgcaacagcaaacactttcaacgataacatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcattggaaatgtcacgaacacc 27377871  T
Q  575 ggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||||||||||||| | |||||||||||| ||||||||||||    
T  27377870 ggcgatccgcatctacgacgttgcggagaaagaccgtggtgaagtt 27377825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 310 - 617
Target Start/End: Original strand, 38110019 - 38110318
Alignment:
Q  310 gattttgagagtagtccctacatttcaataaa-tgtttttaaaatccctacatttttcctctgttagtgcaattggtccctgccatcagtgtcatgttga 408  Q
    |||||||||| ||||  ||||||||||||||| |||||||||||||||| ||| ||||||  |||| |||||||||||||||| ||||||||||||||||    
T  38110019 gattttgagaatagtttctacatttcaataaaatgtttttaaaatcccttcatgtttccttcgttattgcaattggtccctgctatcagtgtcatgttga 38110118  T
Q  409 tgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacaccctcaacaacaagcgctttcaacgataacatc 508  Q
    ||||||||| || ||||||  |||||||||||||||||| ||||||||||  ||| |||||||||||| | |||||||| || |||| ||| ||||||||    
T  38110119 tgaaacacaagcaatcatactaagttcaaccccaccccatcaaatctccataacatcaccttccacactcgcaacaacacgcacttttaactataacatc 38110218  T
Q  509 atcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagat 608  Q
    ||| |  |  |||||||||||||||||         |||||||||||||||| |||||| |||||||| ||||||||||||||| | |||||| ||||||    
T  38110219 atcactctttgcctccaaatcttcccc---------acatatttcactggaaatgtgacaaacaccggtgatccgcatctacgacgatgcggaaaaagat 38110309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 273 - 375
Target Start/End: Complemental strand, 1804755 - 1804653
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  1804755 aagggttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgt 1804656  T
Q  373 tag 375  Q
    |||    
T  1804655 tag 1804653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 273 - 375
Target Start/End: Complemental strand, 11451279 - 11451177
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11451279 aagggttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgt 11451180  T
Q  373 tag 375  Q
    |||    
T  11451179 tag 11451177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 274 - 375
Target Start/End: Original strand, 6476085 - 6476186
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6476085 agggttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgtt 6476184  T
Q  374 ag 375  Q
    ||    
T  6476185 ag 6476186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 274 - 375
Target Start/End: Original strand, 27377647 - 27377748
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  27377647 agggttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgtt 27377746  T
Q  374 ag 375  Q
    ||    
T  27377747 ag 27377748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 274 - 375
Target Start/End: Complemental strand, 39097048 - 39096947
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| ||||||||||||   ||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  39097048 agggttaaatatgtttttggtccctacattttgcacgattttgagaataatccttacatttcaataaatgtttttaaaatccctacatttttcctccgtt 39096949  T
Q  374 ag 375  Q
    ||    
T  39096948 ag 39096947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 283 - 375
Target Start/End: Original strand, 18105723 - 18105816
Alignment:
Q  283 tatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttag 375  Q
    |||||||||| |||||| ||||||||||||||||| || || |||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  18105723 tatgtttttggtccctaaattttatgcgattttgaagaatattccctacatttcaataaaggtttttaaaattcctacatttttcctctgttag 18105816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 276 - 390
Target Start/End: Original strand, 26525462 - 26525576
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttag 375  Q
    |||| |||||||||||| ||||||| ||||   |||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||  ||||    
T  26525462 ggttaaatatgtttttggtccctacgttttgcacgattttgagagtagttcttacatttcaataaatatttttaaaatccctacatttttcctcaattag 26525561  T
Q  376 tgcaattggtccctg 390  Q
    || || | |||||||    
T  26525562 tgtaaatagtccctg 26525576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 275 - 390
Target Start/End: Original strand, 3854065 - 3854181
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    ||||| |||||||||||| ||||||| ||||   ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||  |||    
T  3854065 gggttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagtt 3854164  T
Q  374 agtgcaattggtccctg 390  Q
    |||| || | |||||||    
T  3854165 agtgtaaatagtccctg 3854181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 281 - 375
Target Start/End: Complemental strand, 38110489 - 38110398
Alignment:
Q  281 aatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttag 375  Q
    ||||||| |||||||||||||||||| || ||||||| | ||||||||||||||   |||||||||| ||||||||||||||||||||| |||||    
T  38110489 aatatgtatttgatccctacattttacgcaattttgaaattagtccctacattt---taaatgttttcaaaatccctacatttttcctccgttag 38110398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 274 - 390
Target Start/End: Original strand, 12089692 - 12089809
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    |||||| |||||||||||| ||||||| ||||   | ||||||||| | ||| | |||||||||||||||||||||||||||||||||||||||||  ||    
T  12089692 agggttaaatatgtttttggtccctacgttttgcacaattttgagaattagttcttacatttcaataaatgtttttaaaatccctacatttttcctgagt 12089791  T
Q  373 tagtgcaattggtccctg 390  Q
    ||||| || | |||||||    
T  12089792 tagtgtaaatagtccctg 12089809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 273 - 367
Target Start/End: Original strand, 10709472 - 10709567
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttttcc 367  Q
    ||||||| |||||||||||| ||  || |||||  | |||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||    
T  10709472 aagggttaaatatgtttttggtctttagattttgcgtgattttgaagaatagtccttacatttcaataaatgtttttaaaatccctacatttttcc 10709567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 273 - 367
Target Start/End: Complemental strand, 39947179 - 39947084
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgag-agtagtccctacatttcaataaatgtttttaaaatccctacatttttcc 367  Q
    ||||||| |||||||||||| ||||||||||||  | || |||||  | |||||| |||||||||||||||||||||||||||| |||||||||||    
T  39947179 aagggttaaatatgtttttggtccctacattttgagtgactttgaacaatagtccttacatttcaataaatgtttttaaaatccgtacatttttcc 39947084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 273 - 374
Target Start/End: Original strand, 23221831 - 23221933
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctg 371  Q
    ||||||| |||||||| |||||||||||||||    ||| ||||| || |||| ||||||||||||||||||||||||| |||||||||||||| ||| |    
T  23221831 aagggttaaatatgttattgatccctacatttagcacgactttgaagaatagtacctacatttcaataaatgtttttaatatccctacatttttgctccg 23221930  T
Q  372 tta 374  Q
    |||    
T  23221931 tta 23221933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 309 - 368
Target Start/End: Original strand, 22701545 - 22701605
Alignment:
Q  309 cgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcct 368  Q
    ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||    
T  22701545 cgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcct 22701605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 273 - 375
Target Start/End: Original strand, 10708020 - 10708123
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagag-tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctg 371  Q
    ||||||| |||||||||||| ||||||||||||   |  |||||| |  |||||| |||||||||||||||||||||||||| |||||||||||| || |    
T  10708020 aagggttaaatatgtttttggtccctacattttgccctcttttgacaaatagtccttacatttcaataaatgtttttaaaattcctacatttttcatccg 10708119  T
Q  372 ttag 375  Q
    ||||    
T  10708120 ttag 10708123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 275 - 390
Target Start/End: Complemental strand, 34038342 - 34038227
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||| |||| || |||| ||||||| ||||   ||||||||||| ||||   ||||||||||||||| |||||||||| ||||||||||||||| ||||    
T  34038342 gggttaaatacgtatttggtccctacgttttgcacgattttgagaatagtttttacatttcaataaatatttttaaaattcctacatttttcctcagtta 34038243  T
Q  375 gtgcaattggtccctg 390  Q
    ||| || | |||||||    
T  34038242 gtgtaaatagtccctg 34038227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 274 - 374
Target Start/End: Complemental strand, 2036695 - 2036594
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    |||||| |||||||| || ||||||||||||||  |  |||| | || |||||||||||||||||| ||||||||||||||||||| |||||  ||||||    
T  2036695 agggttaaatatgttattaatccctacattttacacctttttaaagaatagtccctacatttcaattaatgtttttaaaatccctatattttatctctgt 2036596  T
Q  373 ta 374  Q
    ||    
T  2036595 ta 2036594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 273 - 365
Target Start/End: Original strand, 44929980 - 44930073
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgag-agtagtccctacatttcaataaatgtttttaaaatccctacattttt 365  Q
    ||||||| |||||||||||| |||||||||||| |   ||||| |  | |||||| ||||||||||||||| ||||||||||||||||||||||    
T  44929980 aagggttaaatatgtttttggtccctacattttttctcattttaattaatagtccttacatttcaataaatatttttaaaatccctacattttt 44930073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 321 - 366
Target Start/End: Complemental strand, 44934727 - 44934682
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttc 366  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  44934727 tagtccttacatttcaataaatgtttttaaaatccctacatttttc 44934682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 273 - 392
Target Start/End: Original strand, 39945839 - 39945959
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgag-agtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctg 371  Q
    ||||||| |||||||||||| |||| |||||||  | || |||||  | |||||| |||||||||||||||||||||||||||| || |||||||| | |    
T  39945839 aagggttaaatatgtttttggtcccaacattttgagtgactttgaacaatagtccttacatttcaataaatgtttttaaaatccttatatttttccaccg 39945938  T
Q  372 ttagtgcaattggtccctgcc 392  Q
    ||||   ||||||||| ||||    
T  39945939 ttagcaaaattggtccttgcc 39945959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 274 - 364
Target Start/End: Original strand, 2035606 - 2035697
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||| |||||||||||| |||||| ||||||  |  |||| | || || ||||||||||| |||||||||||||||||||||||||||||    
T  2035606 agggttaaatatgtttttggtccctatattttaccctcttttaaagaataatccctacattttaataaatgtttttaaaatccctacatttt 2035697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 276 - 358
Target Start/End: Original strand, 24093329 - 24093412
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttgagag-tagtccctacatttcaataaatgtttttaaaatcccta 358  Q
    |||| |||||||||||||||||||||||||  | || ||||| |  |||||| | |||||||||||||||||||||||||||||    
T  24093329 ggttaaatatgtttttgatccctacattttgagtgactttgaaaaatagtccttgcatttcaataaatgtttttaaaatcccta 24093412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 273 - 330
Target Start/End: Complemental strand, 22704477 - 22704420
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctac 330  Q
    ||||||| |||||||||||| ||||||||||||  |||||||||||| ||||||||||    
T  22704477 aagggttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctac 22704420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 18107462 - 18107416
Alignment:
Q  328 tacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||||| ||||||||||||||||||||||| |||||||||| ||||    
T  18107462 tacattttaataaatgtttttaaaatccctaaatttttcctccgtta 18107416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 358
Target Start/End: Complemental strand, 32861125 - 32861047
Alignment:
Q  281 aatatgtttttgatccctacattttatgcgattttgagag-tagtccctacatttcaataaatgtttttaaaatcccta 358  Q
    |||||||||||| ||||| |||||| || || ||||| |  |||||| || ||||||||||||||||||||||||||||    
T  32861125 aatatgtttttggtccctgcattttgtgtgactttgaaaaatagtccttatatttcaataaatgtttttaaaatcccta 32861047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 330 - 367
Target Start/End: Complemental strand, 10710865 - 10710828
Alignment:
Q  330 catttcaataaatgtttttaaaatccctacatttttcc 367  Q
    |||||||||||||||||||||||| |||||||||||||    
T  10710865 catttcaataaatgtttttaaaattcctacatttttcc 10710828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 353
Target Start/End: Complemental strand, 3624957 - 3624925
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaat 353  Q
    |||||||||||||||||||||||||||||||||    
T  3624957 tagtccctacatttcaataaatgtttttaaaat 3624925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 281 - 364
Target Start/End: Original strand, 7083527 - 7083611
Alignment:
Q  281 aatatgtttttgatccctacattttatg-cgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    ||||||||||| |||| ||||||||| | | ||||  ||| |||||||||||||||| ||||| ||||||||||||  |||||||    
T  7083527 aatatgtttttaatccttacattttacgtccatttgaagaatagtccctacatttcattaaatttttttaaaatcctcacatttt 7083611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 2517459 - 2517502
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||||||||||||| ||||||||||||||||||  |||||||    
T  2517459 tagtccctacatttcattaaatgtttttaaaatcctcacatttt 2517502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 21216969 - 21217012
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||||||||||||| ||||||||||||||||||  |||||||    
T  21216969 tagtccctacatttcattaaatgtttttaaaatcctcacatttt 21217012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 21217365 - 21217322
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||||||||||||| ||||||||||||||||||  |||||||    
T  21217365 tagtccctacatttcattaaatgtttttaaaatcctcacatttt 21217322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 21265037 - 21265080
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||||||||||||| ||||||||||||||||||  |||||||    
T  21265037 tagtccctacatttcattaaatgtttttaaaatcctcacatttt 21265080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 21265433 - 21265390
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||||||||||||| ||||||||||||||||||  |||||||    
T  21265433 tagtccctacatttcattaaatgtttttaaaatcctcacatttt 21265390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 23222907 - 23222836
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgcaattggtccctgcc 392  Q
    |||||| |||||||||||| |||||||||||||||  |||||||   || |||| | |||||||||||||||    
T  23222907 tagtccttacatttcaatatatgtttttaaaatcctcacattttctttccgttactacaattggtccctgcc 23222836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 321 - 355
Target Start/End: Original strand, 24093202 - 24093236
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatcc 355  Q
    |||||||||||||||| ||||||||||||||||||    
T  24093202 tagtccctacatttcattaaatgtttttaaaatcc 24093236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 354
Target Start/End: Complemental strand, 3691433 - 3691400
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatc 354  Q
    |||||||||||||||| |||||||||||||||||    
T  3691433 tagtccctacatttcattaaatgtttttaaaatc 3691400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 295; Significance: 1e-165; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 274 - 620
Target Start/End: Original strand, 28898027 - 28898373
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||| |||    
T  28898027 agggttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgtt 28898126  T
Q  374 agtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 473  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28898127 agtgcaattggtccctgccatcagtgccatgttgatgaaacacaggccatcataacaagttcaacccaaccccaccaaatctccaccacaacaccttcca 28898226  T
Q  474 caccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacac 573  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28898227 cacccgcaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacac 28898326  T
Q  574 cggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  28898327 cggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 28898373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 273 - 620
Target Start/End: Complemental strand, 1244535 - 1244188
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||| ||    
T  1244535 aagggttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgt 1244436  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1244435 tagtgcaattggtccctgccatcagtgccatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatgtccaccacaacaccttcc 1244336  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  1244335 acacccgcaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaatcaacatatttcaccggaagtgtgacgaaca 1244236  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1244235 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 1244188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 273 - 620
Target Start/End: Complemental strand, 41298768 - 41298421
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||| ||    
T  41298768 aagggttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgt 41298669  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41298668 tagtgcaattggtccctgtcatcagtgccatgttgatgaaacacagatcatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 41298569  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41298568 acacccgcaacaacaagcgctttcaacgataacatcatcgctttcggcttccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaaca 41298469  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41298468 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 41298421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 272 - 620
Target Start/End: Complemental strand, 33848390 - 33848042
Alignment:
Q  272 gaagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctg 371  Q
    |||||||| | |||||||||| ||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||| |  |    
T  33848390 gaagggttaattatgtttttgttccctacattttacgcgattttaagaatagtccctacatttcaataaatgtttttaaaattcctacatttttcattcg 33848291  T
Q  372 ttagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttc 471  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33848290 ttagtgcaattggtccctgccatcagtgccatgttgatgaaacacaagccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttc 33848191  T
Q  472 cacaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaac 571  Q
    ||||||| ||||||||||| ||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  33848190 cacacccgcaacaacaagcactttcgacgataacatcatcgctttcggccttcaaatcttcccctctaaaccaacatatttcactagaaatgtgacgaac 33848091  T
Q  572 accggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  33848090 accggcgatccgcatctacaacgctgcggagaaagatcgtggtgaagtt 33848042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 276 - 620
Target Start/End: Original strand, 29783935 - 29784279
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttag 375  Q
    |||| |||||||||||  |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||| ||| |||||    
T  29783935 ggttaaatatgtttttagtccctacattttgtgcgattttgagaatagtccctatatttcaataaatgtttttaaaattcctacattttttctccgttag 29784034  T
Q  376 tgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccaca 475  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29784035 tgcaattggtccctgccatcagtgccatgttgatgaaacgcaagccatcacaacaagttcaaccccaccccaccaaatctccaccacaacaccttccaca 29784134  T
Q  476 ccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccg 575  Q
    ||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||| ||    
T  29784135 cccgcaacagcaagcgctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagcatgacgaacaacg 29784234  T
Q  576 gcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  29784235 gcgatccgcatctacgacgctgcggagaaagatcgtggtgaagtt 29784279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 274 - 618
Target Start/End: Complemental strand, 18443700 - 18443356
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| ||| ||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  18443700 agggttaaatatgtttttggtccttacattttgcgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctatatttttcctccgtt 18443601  T
Q  374 agtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 473  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18443600 agtgcaattggtccctgccatcagtgccatgttgatgaaacacaagccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 18443501  T
Q  474 caccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacac 573  Q
    ||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| || |||||| ||||| |||||||||||    
T  18443500 cacccgcaacaacaagcgctttcaacgacaacatcatcgctttcggcctccaaatcttcccctctaaaccaatatttttcaccggaagcgtgacgaacac 18443401  T
Q  574 cggcgatccgcatctacgaagctgcggagaaagatcgtggtgaag 618  Q
    | |||||| |  ||||||| |||||||||||||||||||||||||    
T  18443400 cagcgatctgtgtctacgacgctgcggagaaagatcgtggtgaag 18443356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 274 - 620
Target Start/End: Original strand, 22954044 - 22954390
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||  |||||| ||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||   ||    
T  22954044 agggttaaatatgtttttagtccctatattttatgcaattttgagaatagtccctacattttaataaatgtttttaaaatccctacatttttccttcatt 22954143  T
Q  374 agtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 473  Q
    ||| ||||||||||  ||||||| || ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22954144 agtacaattggtccaagccatcactgccatgttgatgaaacacaagccatcctaacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 22954243  T
Q  474 caccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacac 573  Q
     |||| ||||  |||   |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||     
T  22954244 tacccgcaacggcaaaaactttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacgaacag 22954343  T
Q  574 cggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
     |||||||||||||||||| |||||||||||||||||||||||||||    
T  22954344 tggcgatccgcatctacgacgctgcggagaaagatcgtggtgaagtt 22954390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 491 - 620
Target Start/End: Complemental strand, 884988 - 884859
Alignment:
Q  491 gctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatccgcatctac 590  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  884988 gctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccggcgatccgcatctac 884889  T
Q  591 gaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||||||||||||||||||||||    
T  884888 gaagctgcggagaaagatcgtggtgaagtt 884859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 273 - 375
Target Start/End: Original strand, 33847863 - 33847965
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| |||||| |||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||| ||    
T  33847863 aagggttaaatatgtttttggtccctatattttacgcgattttgagaatagtctctacatttcaataaatgtttttaaaatccctacattttttctccgt 33847962  T
Q  373 tag 375  Q
    |||    
T  33847963 tag 33847965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 276 - 375
Target Start/End: Original strand, 18443176 - 18443275
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttag 375  Q
    |||| |||||||||||| ||||||||||||   ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| || |||||    
T  18443176 ggttaaatatgtttttggtccctacattttgcacgattttgagaatagtccttacatttcaataaatgtttttaaaatccctacatttttcatccgttag 18443275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 273 - 375
Target Start/End: Complemental strand, 29784471 - 29784369
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||| ||||   ||||||||||| |||||  ||||||||||||||| |||||||||||||||||||||||||||||    
T  29784471 aagggttaaatatgtttttggtccctacgttttgcacgattttgagaatagtctttacatttcaataaatatttttaaaatccctacatttttcctctgt 29784372  T
Q  373 tag 375  Q
    |||    
T  29784371 tag 29784369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 275 - 377
Target Start/End: Original strand, 41298243 - 41298346
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    ||||| |||||||||||| ||||||||||||   ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||  |||    
T  41298243 gggttaaatatgtttttggtccctacattttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagtt 41298342  T
Q  374 agtg 377  Q
    ||||    
T  41298343 agtg 41298346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 273 - 390
Target Start/End: Original strand, 884679 - 884797
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcctctg 371  Q
    ||||||| |||||||||||| ||||||| ||||   ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||  |    
T  884679 aagggttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgag 884778  T
Q  372 ttagtgcaattggtccctg 390  Q
    |||||| || | |||||||    
T  884779 ttagtgtaaatagtccctg 884797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 273 - 390
Target Start/End: Original strand, 1244008 - 1244126
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcctctg 371  Q
    ||||||| |||||||||||| ||||||| ||||   ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||  |    
T  1244008 aagggttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgag 1244107  T
Q  372 ttagtgcaattggtccctg 390  Q
    |||||| || | |||||||    
T  1244108 ttagtgtaaatagtccctg 1244126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 273 - 390
Target Start/End: Complemental strand, 28898553 - 28898435
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcctctg 371  Q
    ||||||| |||||||||||| ||||||| ||||   ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||  |    
T  28898553 aagggttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgag 28898454  T
Q  372 ttagtgcaattggtccctg 390  Q
    |||||| || | |||||||    
T  28898453 ttagtgtaaatagtccctg 28898435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 273 - 366
Target Start/End: Complemental strand, 30939657 - 30939563
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttttc 366  Q
    ||||||| |||||||||||  ||||||||||||| || |||| || || |||||||||||||||| ||||| |||||||||||||||||||||||    
T  30939657 aagggttaaatatgtttttagtccctacattttacgccatttcgaagaatagtccctacatttcattaaatatttttaaaatccctacatttttc 30939563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 276 - 366
Target Start/End: Original strand, 27310047 - 27310138
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttttc 366  Q
    |||| |||||||||||  ||||||||||||| ||  ||| || || | |||||||||||||| |||||||||||||||||||||||||||||    
T  27310047 ggttaaatatgtttttattccctacattttacgccctttcgaagaatggtccctacatttcattaaatgtttttaaaatccctacatttttc 27310138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 365
Target Start/End: Complemental strand, 27311092 - 27311048
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacattttt 365  Q
    |||||||||||||||| |||||||||||||||| |||||||||||    
T  27311092 tagtccctacatttcattaaatgtttttaaaattcctacattttt 27311048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 272 - 366
Target Start/End: Original strand, 4152716 - 4152811
Alignment:
Q  272 gaagggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttttc 366  Q
    |||||||| |||||||||||  | |||||| |||| || ||||| | || || ||||||||||| | | |||||||||||||||||||||||||||    
T  4152716 gaagggttaaatatgtttttagttcctacagtttacgcaattttaaagaataatccctacattttattgaatgtttttaaaatccctacatttttc 4152811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 17075661 - 17075618
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||||||||||||| ||||||||||||||||||  |||||||    
T  17075661 tagtccctacatttcattaaatgtttttaaaatcctcacatttt 17075618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 275 - 364
Target Start/End: Original strand, 28852692 - 28852782
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatg-cgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    ||||| ||||||||||| |||| |||||||| || | ||||  | | || ||||||||||||| ||||||||||||||||||  |||||||    
T  28852692 gggttaaatatgtttttaatccttacattttgtgtccatttaaataatactccctacatttcattaaatgtttttaaaatcctcacatttt 28852782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 355
Target Start/End: Original strand, 20543910 - 20543991
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatcc 355  Q
    ||||| ||||||||||| || | |||||||| |||   ||||| || |||||||||||||||| ||||| ||||||||||||    
T  20543910 gggttaaatatgtttttaattcttacattttgtgcccctttgaagaatagtccctacatttcattaaatttttttaaaatcc 20543991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 358
Target Start/End: Complemental strand, 20544182 - 20544145
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatcccta 358  Q
    |||||| | |||||||||||||||||||||||||||||    
T  20544182 tagtccttgcatttcaataaatgtttttaaaatcccta 20544145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 364
Target Start/End: Complemental strand, 32092571 - 32092530
Alignment:
Q  323 gtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||||||||||| ||||||||||||||||||  |||||||    
T  32092571 gtccctacatttcattaaatgtttttaaaatcctcacatttt 32092530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 293; Significance: 1e-164; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 276 - 620
Target Start/End: Complemental strand, 30428194 - 30427850
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttag 375  Q
    |||| |||||||||||| ||||||||||||  |||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  30428194 ggttaaatatgtttttggtccctacattttgcgcgattttgagaatagttcctacatttcaatgaatgtttttaaaatccctacattttttctccgttag 30428095  T
Q  376 tgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccaca 475  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30428094 tgcaattggtccctgccatcagtgccatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccaca 30427995  T
Q  476 ccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccg 575  Q
    ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30427994 cccgcaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacaccg 30427895  T
Q  576 gcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  30427894 gcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 30427850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 273 - 620
Target Start/End: Original strand, 17968034 - 17968381
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||| ||    
T  17968034 aagggttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgt 17968133  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17968134 tagtgcaattggtccctgccatcggtgccatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 17968233  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    ||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17968234 acacccgtaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaaca 17968333  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17968334 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 17968381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 273 - 620
Target Start/End: Complemental strand, 45230653 - 45230306
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||| ||||||||||||||||||| |||||| ||| ||    
T  45230653 aagggttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatgtttttaaaatccctatattttttctccgt 45230554  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45230553 tagtgcaattgatccctgccatcagtgccatgttgatgaaacacaggccatcataacaagttcaacccaaccccaccaaatctccaccacaacaccttcc 45230454  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45230453 acacccgcaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaaca 45230354  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  45230353 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 45230306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 273 - 620
Target Start/End: Complemental strand, 46802845 - 46802498
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| |||||||||||||| | ||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||  ||    
T  46802845 aagggttaaatatgtttttggtccctacattttatacaattttgaaaatagtccctacattttaataaatgtttttaaaatccctacatttttccttcgt 46802746  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    ||||||||||||||| |||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46802745 tagtgcaattggtccttgccatcactgccatgttgatgaaacacaagccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 46802646  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| ||||| ||||| |||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||| ||||| ||||||||| |    
T  46802645 acacccgcaacagcaagcactttcaacgataacatcatcgctttcggcctccaaatcttcatctctaaaccaacatatttcagtggaaatgtgacgaaaa 46802546  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||||||||||||||| | |||||||||||| ||||||||||||    
T  46802545 ccggcgatccgcatctacgacgatgcggagaaagaccgtggtgaagtt 46802498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 274 - 620
Target Start/End: Original strand, 47410421 - 47410767
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| |||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  47410421 agggttaaatatgtttttggtccctatattttatgcaattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttccttcgtt 47410520  T
Q  374 agtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 473  Q
    |||||||||| |||||||||||| || ||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47410521 agtgcaattgatccctgccatcactgccatgttgatgaaacacaagtcatcctaacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 47410620  T
Q  474 caccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacac 573  Q
     |||| ||||  |||   |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||     
T  47410621 tacccgcaacggcaaaaactttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacgaacag 47410720  T
Q  574 cggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
     |||||||||||||||||| | |||||||||||||||||||||||||    
T  47410721 tggcgatccgcatctacgacgttgcggagaaagatcgtggtgaagtt 47410767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 274 - 620
Target Start/End: Complemental strand, 32267005 - 32266659
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |  |||    
T  32267005 agggttaaatatgtttttggtccctacattttacgcgattttgagaataatccctacatttcaataaatgtttttaaaatccctacatttttctttcgtt 32266906  T
Q  374 agtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 473  Q
     |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  32266905 ggtgcaattggtccctgccttcagtgtcatattgatgaaacacaagccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttcca 32266806  T
Q  474 caccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacac 573  Q
    ||||  ||||| ||| | |||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| ||| ||||||||    
T  32266805 cacctgcaacagcaaacactttcaacgataacatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacac 32266706  T
Q  574 cggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
     |||||||||||||||||| | |||||||||||| ||||||||||||    
T  32266705 tggcgatccgcatctacgacgttgcggagaaagaccgtggtgaagtt 32266659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 274 - 620
Target Start/End: Complemental strand, 40124598 - 40124252
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| ||||| |||||| ||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |  |||    
T  40124598 agggttaaatatatttttggtccctacattttacgcgattttgagaataatccctacatttcaataaatgtttttaaaatccctacatttttctttcgtt 40124499  T
Q  374 agtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 473  Q
     |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40124498 ggtgcaattggtccctgccttcagtgtcatattgatgaaacacaagccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttcca 40124399  T
Q  474 caccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacac 573  Q
    ||||| ||||| ||| | |||||||| ||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| ||| ||||||||    
T  40124398 cacccgcaacagcaaacactttcaacaataacatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacac 40124299  T
Q  574 cggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||| |||||||||| | |||||||||||| ||||||||||||    
T  40124298 cggcgatctgcatctacgacgttgcggagaaagaccgtggtgaagtt 40124252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 276 - 620
Target Start/End: Complemental strand, 9123205 - 9122861
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttag 375  Q
    |||| |||||||||||| |||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||   ||||    
T  9123205 ggttaaatatgtttttggtccctacattttatgcaattttgagaatagtctctacatttcaataaatgtttttaaaatccctacatttttccttctttag 9123106  T
Q  376 tgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccaca 475  Q
    | ||||||||||||||||||| || ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  9123105 ttcaattggtccctgccatcactgccatgttgatgaaacacaagccatcctaacaagttcaaccccaccccaccaaatctccaccacaacaccttccata 9123006  T
Q  476 ccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccg 575  Q
    ||| ||||  |||   |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |    
T  9123005 cccgcaacggcaaaaactttcaacgataacatcatcgcttttggcctccaaatcttcccctctaaaccaacatatttcactggaaatgtgacgaacagtg 9122906  T
Q  576 gcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||| ||||||||| ||||  |||||||||||||||||||||    
T  9122905 gcgatccacatctacgacgctgtagagaaagatcgtggtgaagtt 9122861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 128 - 264
Target Start/End: Original strand, 11032541 - 11032677
Alignment:
Q  128 ctgttaaggtataaagaagtgctctttataaaaagaaagaagattctatcttattatttgtaaaaataatctaactctaatttgattactttatacatgg 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11032541 ctgttaaggtataaagaagtgctctttataaaaagaaagaagattctatcttatcatttgtaaaaataatctaactctaatttgattactttatacatgg 11032640  T
Q  228 aaaagtatcaacacatccttaaaacataacaggatat 264  Q
    ||||||||||||||||||||||||||||||| |||||    
T  11032641 aaaagtatcaacacatccttaaaacataacaagatat 11032677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 11006271 - 11006384
Alignment:
Q  17 atagattttacaaagaacacctctaagggaaataaataatggcccctctaatggaaatgtttcctaatttgcatactaaggagaatttagcatctgagga 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||| ||||||| ||||    
T  11006271 atagattttacaaagaacacctctaagggaaataaataatggcccctccaagggaaatgtttcctaacttgcatactaaggagaattgagcatctaagga 11006370  T
Q  117 ggaacttgcccctg 130  Q
    ||||||||||||||    
T  11006371 ggaacttgcccctg 11006384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 274 - 375
Target Start/End: Original strand, 32266481 - 32266582
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  32266481 agggttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgtt 32266580  T
Q  374 ag 375  Q
    ||    
T  32266581 ag 32266582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 274 - 375
Target Start/End: Original strand, 46802320 - 46802421
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| |||| |||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  46802320 agggttaaatatgtttttggtccccacattttacgcgattttgagaatagtccctacatttcaataaaagtttttaaaatccctacatttttcctctgtt 46802419  T
Q  374 ag 375  Q
    ||    
T  46802420 ag 46802421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 275 - 375
Target Start/End: Complemental strand, 47410944 - 47410844
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  47410944 gggttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgtta 47410845  T
Q  375 g 375  Q
    |    
T  47410844 g 47410844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 46 - 231
Target Start/End: Complemental strand, 10931758 - 10931577
Alignment:
Q  46 aaataaataatggcccctctaatggaaatgtttcctaatttgcatactaaggagaatttagcatctgaggaggaacttgcccctgttaaggtataaagaa 145  Q
    ||||||| || ||||||||||| ||||||||||||||| |||||||||||| ||||| |||||||||| ||||||||| ||||        |||||||||    
T  10931758 aaataaacaacggcccctctaagggaaatgtttcctaacttgcatactaagaagaatatagcatctgaagaggaactttcccc--------tataaagaa 10931667  T
Q  146 gtgc----tctttataaaaagaaagaagattctatcttattatttgtaaaaataatctaactctaatttgattactttatacatggaaaa 231  Q
    ||||    |||||||||||||||| |||||  ||||||||||||||||  || ||| |||||||||||||| ||||||||| ||||||||    
T  10931666 gtgcgcgttctttataaaaagaaaaaagatcttatcttattatttgtaggaagaatttaactctaatttgaatactttatagatggaaaa 10931577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 274 - 375
Target Start/End: Original strand, 9122683 - 9122784
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| |||| |||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||| |||    
T  9122683 agggttaaatatgtttttggtccccacattttacgcgattttgagaatagtccttacatttcaataaatgtttttaaaatccctacattttttctccgtt 9122782  T
Q  374 ag 375  Q
    ||    
T  9122783 ag 9122784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 274 - 375
Target Start/End: Original strand, 40124074 - 40124175
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| ||| |||||||||   |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  40124074 agggttaaatatgtttttggtccttacattttacttgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgtt 40124173  T
Q  374 ag 375  Q
    ||    
T  40124174 ag 40124175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 294 - 367
Target Start/End: Original strand, 8997359 - 8997432
Alignment:
Q  294 tccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcc 367  Q
    |||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8997359 tccctatattttgtgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcc 8997432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 54 - 139
Target Start/End: Complemental strand, 11043446 - 11043361
Alignment:
Q  54 aatggcccctctaatggaaatgtttcctaatttgcatactaaggagaatttagcatctgaggaggaacttgcccctgttaaggtat 139  Q
    |||||||||||||| |||||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||  |||||||||    
T  11043446 aatggcccctctaagggaaatgtttcctaatttacataccaaggagactttagcatctgaggaggaacttgccccatttaaggtat 11043361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 274 - 390
Target Start/End: Original strand, 30427671 - 30427788
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    |||||| |||||||||||| ||||||| ||||   ||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||  ||    
T  30427671 agggttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagt 30427770  T
Q  373 tagtgcaattggtccctg 390  Q
    ||||| || | |||||||    
T  30427771 tagtgtaaatagtccctg 30427788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 275 - 390
Target Start/End: Original strand, 45230128 - 45230244
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    ||||| |||||||||||| ||||||| ||||   | ||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||  |||    
T  45230128 gggttaaatatgtttttggtccctacgttttgcactattttgagaattagtccttacatttcaataaatgtttttaaaatccctacatttttcctgagtt 45230227  T
Q  374 agtgcaattggtccctg 390  Q
    |||| || | |||||||    
T  45230228 agtgtaaatagtccctg 45230244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 10908383 - 10908305
Alignment:
Q  69 ggaaatgtttcctaatttgcata--ctaaggagaatttagcatctgaggaggaacttgcccctgttaaggtataaagaa 145  Q
    ||||||||||||| | |||||||  ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  10908383 ggaaatgtttcctgacttgcatatactaaggagaatttagcatctgagtaggaacttgtccctgttaaggtataaagaa 10908305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 46 - 123
Target Start/End: Complemental strand, 10977167 - 10977090
Alignment:
Q  46 aaataaataatggcccctctaatggaaatgtttcctaatttgcatactaaggagaatttagcatctgaggaggaactt 123  Q
    ||||||| || ||||||||||| ||||||||||||||| ||||||||||||  |||||||||| ||||||||||||||    
T  10977167 aaataaacaacggcccctctaagggaaatgtttcctaacttgcatactaagacgaatttagcacctgaggaggaactt 10977090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 11032468 - 11032525
Alignment:
Q  17 atagattttacaaagaacacctctaagggaaataaataatggcccctctaatggaaat 74  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  11032468 atagattttacaaagaacacctctaaggaaaataaataatggcccctctaagggaaat 11032525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 274 - 368
Target Start/End: Complemental strand, 17968560 - 17968465
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcct 368  Q
    |||||| |||||||||||| ||| ||| ||||   ||||||||||| | ||||  |||||||||||||||||||||||||||||||||||||||||    
T  17968560 agggttaaatatgtttttggtccatacgttttgcacgattttgagaattagtctttacatttcaataaatgtttttaaaatccctacatttttcct 17968465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 274 - 366
Target Start/End: Complemental strand, 1501073 - 1500980
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttttc 366  Q
    |||||| |||||||||||  |||||| |||||  ||  |||||| || |||||||||||||||| |||||||||||||||||||||||||||||    
T  1501073 agggttaaatatgtttttagtccctatattttgcgctcttttgaagaatagtccctacatttcattaaatgtttttaaaatccctacatttttc 1500980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 273 - 385
Target Start/End: Complemental strand, 36793667 - 36793554
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctg 371  Q
    ||||||| |||||||||||  |||||| |||||  | || ||||| || ||||| |||||||| ||||||||||||||||||||||||||||||  || |    
T  36793667 aagggttaaatatgtttttagtccctatattttgcgtgactttgaagaatagtctctacattttaataaatgtttttaaaatccctacatttttattccg 36793568  T
Q  372 ttagtgcaattggt 385  Q
    ||||| ||||||||    
T  36793567 ttagtacaattggt 36793554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 273 - 374
Target Start/End: Original strand, 45664684 - 45664786
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctg 371  Q
    ||||||| |||||||||||  ||||||||||||| ||   ||||| || ||||| |||||||| ||||||||||||||||||||| |||||||| ||| |    
T  45664684 aagggttaaatatgtttttagtccctacattttacgctcatttgaagaatagtctctacattttaataaatgtttttaaaatccccacatttttactccg 45664783  T
Q  372 tta 374  Q
    |||    
T  45664784 tta 45664786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 272 - 387
Target Start/End: Original strand, 36792236 - 36792351
Alignment:
Q  272 gaagggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctct 370  Q
    |||||||| ||||||||||   | ||||||||||  | |||||| | || || |||||| ||||||||||||||||| ||||||||||||||||| |||     
T  36792236 gaagggttaaatatgttttaagttcctacattttgcgtgattttcaagaataatccctatatttcaataaatgtttt-aaaatccctacatttttactcc 36792334  T
Q  371 gttagtgcaattggtcc 387  Q
    |||||| ||||||||||    
T  36792335 gttagtacaattggtcc 36792351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 276 - 364
Target Start/End: Complemental strand, 37717885 - 37717797
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||| |||||||||||  ||||||||||||| || | ||||| | |||||| |||||||||||||| ||||||||||||| ||| ||||    
T  37717885 ggttaaatatgtttttagtccctacattttacgcaactttgaaaatagtccttacatttcaataaaggtttttaaaatccttacttttt 37717797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 11042841 - 11042777
Alignment:
Q  169 gattctatcttattatttgtaaaaataatctaactctaatttgattactttatacatggaaaagt 233  Q
    |||| |||||||||||||||| | |  |||| |||||||||||||||||||||| ||||||||||    
T  11042841 gattttatcttattatttgtacatagtatctgactctaatttgattactttatagatggaaaagt 11042777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 356
Target Start/End: Complemental strand, 12869747 - 12869663
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccc 356  Q
    ||||||| |||||||||||| |||||| ||||||  |   ||| | || ||||||||||||||||||||||||||||||||||||    
T  12869747 aagggttaaatatgtttttggtccctatattttaccctcctttaaagaatagtccctacatttcaataaatgtttttaaaatccc 12869663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 276 - 358
Target Start/End: Complemental strand, 3591254 - 3591171
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttgagag-tagtccctacatttcaataaatgtttttaaaatcccta 358  Q
    |||| |||||||||||| |||||||||| |  | || ||||| |  |||||| |||||||||||||||||||||||||||||||    
T  3591254 ggttaaatatgtttttggtccctacattgtgcgtgactttgaaaaatagtccttacatttcaataaatgtttttaaaatcccta 3591171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 281 - 388
Target Start/End: Complemental strand, 36297634 - 36297527
Alignment:
Q  281 aatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgcaa 380  Q
    |||| ||||||||||| |  |||||| || ||||||| | || ||||||||||| ||||||| ||||||||||  ||| |||||||||| ||||  | ||    
T  36297634 aatacgtttttgatccttttattttacgcaattttgaaaatattccctacattttaataaatatttttaaaatttctatatttttcctccgttaccgaaa 36297535  T
Q  381 ttggtccc 388  Q
    ||||||||    
T  36297534 ttggtccc 36297527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 363
Target Start/End: Original strand, 12868479 - 12868521
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacattt 363  Q
    |||| ||||||||||||||||| ||||||||||||||||||||    
T  12868479 tagttcctacatttcaataaatatttttaaaatccctacattt 12868521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 360
Target Start/End: Original strand, 31889481 - 31889519
Alignment:
Q  322 agtccctacatttcaataaatgtttttaaaatccctaca 360  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  31889481 agtccctacatttcaataaacgtttttaaaatccctaca 31889519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 321 - 366
Target Start/End: Original strand, 1500105 - 1500150
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttc 366  Q
    |||||||||||||||| | ||||||||||||||||||| |||||||    
T  1500105 tagtccctacatttcattgaatgtttttaaaatccctatatttttc 1500150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 5172791 - 5172834
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    ||||| |||||||||| |||||||||||||||||| ||||||||    
T  5172791 tagtctctacatttcattaaatgtttttaaaatccttacatttt 5172834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 336 - 368
Target Start/End: Complemental strand, 8998264 - 8998232
Alignment:
Q  336 aataaatgtttttaaaatccctacatttttcct 368  Q
    ||||||||||||||||||||||||| |||||||    
T  8998264 aataaatgtttttaaaatccctacagttttcct 8998232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 273 - 352
Target Start/End: Original strand, 19895397 - 19895477
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttg-agagtagtccctacatttcaataaatgtttttaaaa 352  Q
    ||||||| |||||||||||  ||| ||||||||||||   |||| ||| |||||| ||||||| | |||||||||||||||    
T  19895397 aagggttaaatatgtttttagtccttacattttatgctcgtttgaagaatagtccatacatttaattaaatgtttttaaaa 19895477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 330 - 358
Target Start/End: Original strand, 19895628 - 19895656
Alignment:
Q  330 catttcaataaatgtttttaaaatcccta 358  Q
    |||||||||||||||||||||||||||||    
T  19895628 catttcaataaatgtttttaaaatcccta 19895656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 292; Significance: 1e-163; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 273 - 620
Target Start/End: Complemental strand, 31093519 - 31093172
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||  |||||||||| | |||||||||||||||||| |||||||||||||||||||||||||| ||| ||    
T  31093519 aagggttaaatatgtttttggtccctacattttgcgcgattttgaaaatagtccctacatttcaatgaatgtttttaaaatccctacattttttctccgt 31093420  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31093419 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 31093320  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31093319 acacccgcaacaacaagcgctttcaacgataacatcatcgctttcggccttcaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaaca 31093220  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||    
T  31093219 ccggcgatccgcatctacgaagctgcggagaaagttcgtggtgaagtt 31093172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 275 - 620
Target Start/End: Complemental strand, 3879294 - 3878949
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||| ||||| |||||| ||||||||||||  |||||||||||| || ||||||||||||||| ||||||||||||||||||| |||||| ||| ||||    
T  3879294 gggttaaatatatttttggtccctacattttgcgcgattttgagaataatccctacatttcaatgaatgtttttaaaatccctatattttttctccgtta 3879195  T
Q  375 gtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccac 474  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3879194 gtgcaattggtccctgccatcagtgccatgttgatgaaacataggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccac 3879095  T
Q  475 accctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacacc 574  Q
    |||| |||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  3879094 acccgcaacaacaagcgctttcaacgataacatcatcactttcagcctccaaatcttcccctctaaatcaacatatttcaccggaagtgtgatgaacacc 3878995  T
Q  575 ggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  3878994 ggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 3878949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 283 - 620
Target Start/End: Complemental strand, 21949913 - 21949576
Alignment:
Q  283 tatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgcaatt 382  Q
    |||||||||| ||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |  ||| ||||||||    
T  21949913 tatgtttttggtccctacattttacgcgattttaagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcattcgttcgtgcaatt 21949814  T
Q  383 ggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacaccctcaa 482  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21949813 ggtccctgccatcagtgtcatgttgatgaaacacaagtcatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccacacccgcaa 21949714  T
Q  483 caacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacaccggcgatcc 582  Q
    || ||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| |    
T  21949713 cagcaagcactttcaacgataacatcatcgctttcgacctccaaatcttcccctctaaaccaacatatttcactagaaatgtgacgaacagcggcgattc 21949614  T
Q  583 gcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||||| |||||||||||||||||||||||||||    
T  21949613 gcatctacgacgctgcggagaaagatcgtggtgaagtt 21949576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 273 - 620
Target Start/End: Original strand, 28641158 - 28641505
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |  ||    
T  28641158 aagggttaaatatgtttttggtccctacattttacgcgattttgagaataatccctacatttcaataaatgtttttaaaatccctacatttttctttcgt 28641257  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    | |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28641258 tggtgcaattggtccctgccttcagtgtcatattgatgaaacacaagccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttcc 28641357  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| ||||||||| | |||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| ||| |||||||    
T  28641358 acacccgcaacaacaaacactttcaacgataacatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaaca 28641457  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||||||||||||||| | |||||||||||| ||||||||||||    
T  28641458 ccggcgatccgcatctacgacgttgcggagaaagaccgtggtgaagtt 28641505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 273 - 614
Target Start/End: Complemental strand, 3192323 - 3191982
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| |||||| ||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||| ||    
T  3192323 aagggttaaatatgtttttggtccctatattttgtgcgattttgagaatagtccttacatttcaataaatgtttttaaaatccctacattttttctccgt 3192224  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3192223 tagtgcaattggtccctgccatcagtgccatgttgatgaaacacaagccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 3192124  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||| ||||| ||||    
T  3192123 acacccgcaacaacaagcgctttcaacgacaacatcatcgctttcggcctccaaatcttcccctctaaaccaacatttttcaccggaagcgtgacaaaca 3192024  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggt 614  Q
    ||||||||||   ||||||| |||||| |||||||| |||||    
T  3192023 ccggcgatccatgtctacgacgctgcgaagaaagattgtggt 3191982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 273 - 618
Target Start/End: Original strand, 39402209 - 39402554
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  39402209 aagggttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgt 39402308  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  39402309 tagtgcagttggtccctgccatcagtgtcatgttgatgaaacacaagccatcataacaagttcaaccccaccccatcaaatctccaccacaaaaccttcc 39402408  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| ||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||    
T  39402409 acacccacaacagcaagcgctttcaacgacaacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccgaaagcgtgacgaaca 39402508  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaag 618  Q
    ||| |||||||  |||||||   ||| |||||||||||||||||||    
T  39402509 ccgacgatccgtgtctacgacattgcagagaaagatcgtggtgaag 39402554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 273 - 620
Target Start/End: Original strand, 5746758 - 5747105
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||| |||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| |  ||    
T  5746758 aagggttaaatatgtttttggtccctacattttacgcgattttgagaataatccctacatttcaataaatgttttaaaaatccctacatttttctttcgt 5746857  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    | |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5746858 tggtgcaattggtccctgccttcagtgtcatattgatgaaacacaagccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttcc 5746957  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| ||||| ||| | |||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||| ||||| ||| |||||||    
T  5746958 acacccgcaacagcaaacactttcaacgataacatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcattggaaatgtcacgaaca 5747057  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    |||||||||||||||||||| | |||||||||||| ||||||||||||    
T  5747058 ccggcgatccgcatctacgacgttgcggagaaagaccgtggtgaagtt 5747105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 273 - 620
Target Start/End: Complemental strand, 6543937 - 6543591
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||| ||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |  ||    
T  6543937 aagggttaaatatgtttttggtcc-tacattttacgcgattttgagaataatccctacatttcaataaatgtttttaaaatccctacatttttctttcgt 6543839  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    | |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6543838 tggtgcaattggtccctgccttcagtgtcatattgatgaaacacaagccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttcc 6543739  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| ||||| ||| | |||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| ||| |||||||    
T  6543738 acacccgcaacagcaaacactttcaacgataacatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaaca 6543639  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    | |||||||||||||||||| | |||||||||||| ||||||||||||    
T  6543638 ctggcgatccgcatctacgacgttgcggagaaagaccgtggtgaagtt 6543591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 275 - 620
Target Start/End: Complemental strand, 31162942 - 31162597
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||| |  |||     
T  31162942 gggttaaatatgtttttggtccctacattttacgcgattttgagaataatccttacatttcaataaatgtttttaaaatccctacatttttctttcgttg 31162843  T
Q  375 gtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttccac 474  Q
    |||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31162842 gtgcaattggtccctgccttcagtgtcatattgatgaaacacaagccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttccac 31162743  T
Q  475 accctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacacc 574  Q
    |||| ||||| ||| | |||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| ||| |||||||||    
T  31162742 acccgcaacagcaaacactttcaacgataacatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaacacc 31162643  T
Q  575 ggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    | ||||| |||||||||| | |||||||||||| ||||||||||||    
T  31162642 gacgatctgcatctacgacgttgcggagaaagaccgtggtgaagtt 31162597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 273 - 375
Target Start/End: Complemental strand, 5747284 - 5747182
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  5747284 aagggttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgt 5747185  T
Q  373 tag 375  Q
    |||    
T  5747184 tag 5747182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 273 - 375
Target Start/End: Original strand, 6543412 - 6543514
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  6543412 aagggttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgt 6543511  T
Q  373 tag 375  Q
    |||    
T  6543512 tag 6543514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 276 - 375
Target Start/End: Original strand, 21949400 - 21949499
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttag 375  Q
    |||| |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21949400 ggttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgttag 21949499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 274 - 375
Target Start/End: Original strand, 31162419 - 31162520
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| ||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  31162419 agggttaaatatgtttttggtccctacattttacgtgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgtt 31162518  T
Q  374 ag 375  Q
    ||    
T  31162519 ag 31162520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 275 - 375
Target Start/End: Complemental strand, 28641682 - 28641582
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||| ||||||| |||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  28641682 gggttaaatatgtgtttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacatttttcctccgtta 28641583  T
Q  375 g 375  Q
    |    
T  28641582 g 28641582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 275 - 369
Target Start/End: Complemental strand, 39402735 - 39402641
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctc 369  Q
    ||||| |||||||||||| |||||||||||||  ||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  39402735 gggttaaatatgtttttggtccctacattttacacgattttgagaatagtccttacatttcaataaatatttttaaaatccctacatttttcctc 39402641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 275 - 375
Target Start/End: Original strand, 3191797 - 3191897
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    ||||| |||||||||||  ||||||||||||   ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  3191797 gggttaaatatgtttttagtccctacattttgcacgattttgagaatagtccttacatttcaataaatgtttttaaaatccctacatttttcctccgtta 3191896  T
Q  375 g 375  Q
    |    
T  3191897 g 3191897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 273 - 390
Target Start/End: Original strand, 3878769 - 3878887
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcctctg 371  Q
    ||||||| |||||||||||| ||||||| ||||   ||||||||||| | ||||| ||||||||||||||||||||||||||||||| |||||||||  |    
T  3878769 aagggttaaatatgtttttggtccctacgttttgcacgattttgagaattagtccttacatttcaataaatgtttttaaaatccctatatttttcctgag 3878868  T
Q  372 ttagtgcaattggtccctg 390  Q
    |||||| || | |||||||    
T  3878869 ttagtgtaaatagtccctg 3878887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 273 - 374
Target Start/End: Original strand, 14625119 - 14625220
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||| || ||||| |   |||||| || |||| |||||||||||||||||||||||||||||||||| ||    
T  14625119 aagggttaaatatgtttttggtccctacattttacgcaattttaaatatagtccataaattttaataaatgtttttaaaatccctacatttttcctccgt 14625218  T
Q  373 ta 374  Q
    ||    
T  14625219 ta 14625220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 273 - 367
Target Start/End: Complemental strand, 19353162 - 19353067
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttttcc 367  Q
    ||||||| |||||||||||| ||| || ||||| || || ||||| || ||||||  |||||||||||||||||||||||||||||||||||||||    
T  19353162 aagggttaaatatgtttttggtccttagattttgtgtgactttgaagaatagtcctcacatttcaataaatgtttttaaaatccctacatttttcc 19353067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 274 - 374
Target Start/End: Original strand, 4186752 - 4186853
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    |||||| |||||||| |||||||||||||||    ||| ||||| || |||| ||||||||||||||||||||||||| |||||||||||||| ||| ||    
T  4186752 agggttaaatatgttattgatccctacatttagcacgactttgaagaatagtacctacatttcaataaatgtttttaatatccctacatttttgctccgt 4186851  T
Q  373 ta 374  Q
    ||    
T  4186852 ta 4186853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 321 - 374
Target Start/End: Complemental strand, 14626133 - 14626080
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  14626133 tagtccctacatttcaataaatgtttttaaaatccctacattttttatctgtta 14626080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 274 - 366
Target Start/End: Original strand, 31092993 - 31093086
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttc 366  Q
    |||||| |||||||||||| |||| || ||||   ||||||||||| | ||||| |||||||||||| ||||||||||||||||||||||||||    
T  31092993 agggttaaatatgtttttggtcccaacgttttgcacgattttgagaattagtccttacatttcaatagatgtttttaaaatccctacatttttc 31093086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 321 - 369
Target Start/End: Original strand, 119056 - 119104
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctc 369  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  119056 tagtccttacatttcaataaatgtttttaaaatccctacatttttcctc 119104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 321 - 375
Target Start/End: Complemental strand, 120002 - 119948
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttag 375  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||| |||||    
T  120002 tagtccttacatttcaataaatgtttttaaaatccttacatttttcctccgttag 119948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 275 - 375
Target Start/End: Original strand, 19352298 - 19352399
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgagag-tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    ||||| |||||||||||| | |||||||||||  |  |||||| |  |||||| |||||||||||||||||||||||||| | ||||||||||||| |||    
T  19352298 gggttaaatatgtttttggttcctacattttacccttttttgacaaatagtccttacatttcaataaatgtttttaaaattcttacatttttcctccgtt 19352397  T
Q  374 ag 375  Q
    ||    
T  19352398 ag 19352399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 363
Target Start/End: Original strand, 119181 - 119272
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacattt 363  Q
    ||||||| |||||||||||| ||| || |||||  | || ||| | || |||||| ||||||||||||||||||||||||||||||||||||    
T  119181 aagggttaaatatgtttttggtccttagattttgcgtgactttaaagaatagtccttacatttcaataaatgtttttaaaatccctacattt 119272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 321 - 375
Target Start/End: Complemental strand, 19353282 - 19353228
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttag 375  Q
    |||||| |||||||||||||| ||||||||||||| ||||||||||||| |||||    
T  19353282 tagtccttacatttcaataaacgtttttaaaatccatacatttttcctccgttag 19353228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 321 - 366
Target Start/End: Original strand, 19352517 - 19352562
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttc 366  Q
    |||||| | |||||||||||||||||||||||||||||||||||||    
T  19352517 tagtccttgcatttcaataaatgtttttaaaatccctacatttttc 19352562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 281 - 365
Target Start/End: Complemental strand, 30351789 - 30351704
Alignment:
Q  281 aatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacattttt 365  Q
    |||||||| |||||||||||||||||  |   ||| | || |||||||||||||||||||||| |||||||||| |||||||||||    
T  30351789 aatatgttattgatccctacattttaccctcctttaaagaatagtccctacatttcaataaatatttttaaaattcctacattttt 30351704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 328 - 375
Target Start/End: Complemental strand, 718261 - 718214
Alignment:
Q  328 tacatttcaataaatgtttttaaaatccctacatttttcctctgttag 375  Q
    |||||||||||||||||||||||||||||| ||||||| ||| |||||    
T  718261 tacatttcaataaatgtttttaaaatccctgcatttttgctccgttag 718214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 363
Target Start/End: Complemental strand, 119828 - 119786
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacattt 363  Q
    |||||| | ||||||||||||||||||||||||||||||||||    
T  119828 tagtccttgcatttcaataaatgtttttaaaatccctacattt 119786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 321 - 358
Target Start/End: Complemental strand, 3406729 - 3406692
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatcccta 358  Q
    |||||| |||||||||||||||||||||||||||||||    
T  3406729 tagtccttacatttcaataaatgtttttaaaatcccta 3406692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 321 - 365
Target Start/End: Original strand, 30350647 - 30350691
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacattttt 365  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||    
T  30350647 tagtccctacatttcaataaatatttttaaaattcctatattttt 30350691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 281 - 392
Target Start/End: Original strand, 37813380 - 37813492
Alignment:
Q  281 aatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgca 379  Q
    ||||| |||||  |||||||| |||| || ||||||| || |||||| ||||||||| ||| |||||||||||| |||| |||||||| | ||||    |    
T  37813380 aatatatttttagtccctacagtttacgccattttgaagaatagtccatacatttcattaagtgtttttaaaattcctaaatttttccaccgttaacaaa 37813479  T
Q  380 attggtccctgcc 392  Q
    |||||||||||||    
T  37813480 attggtccctgcc 37813492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 87305 - 87262
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||||||||||||| ||||||||||||||||||  |||||||    
T  87305 tagtccctacatttcattaaatgtttttaaaatcctcacatttt 87262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 392
Target Start/End: Complemental strand, 4187880 - 4187809
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgcaattggtccctgcc 392  Q
    |||||| ||||||||||||||| ||||||||||||  |||||||   || |||| | |||||||||||||||    
T  4187880 tagtccttacatttcaataaatatttttaaaatcctcacattttctttccgttactacaattggtccctgcc 4187809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 8647395 - 8647358
Alignment:
Q  320 gtagtccctacatttcaataaatgtttttaaaatccct 357  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  8647395 gtagtccttgcatttcaataaatgtttttaaaatccct 8647358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 321 - 353
Target Start/End: Complemental strand, 38834822 - 38834790
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaat 353  Q
    |||||||||||||||| ||||||||||||||||    
T  38834822 tagtccctacatttcattaaatgtttttaaaat 38834790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 283; Significance: 1e-158; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 274 - 620
Target Start/End: Original strand, 12734171 - 12734517
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| ||||||||||||  |||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||| ||| |||    
T  12734171 agggttaaatatgtttttggtccctacattttgcgcgattttgagaatagtccctacatttcaatgaatatttttaaaatccctacattttttctccgtt 12734270  T
Q  374 agtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 473  Q
    |||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12734271 agtgcaattggtccctgccatcagtgccatgttgatcaaacacaagccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcca 12734370  T
Q  474 caccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaacac 573  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12734371 cacccgcaacaacaagcgctttcaacgataacatcatcgctttcggcctccaaatcttcccctctaaaccaacatatttcaccggaagtgtgacgaacac 12734470  T
Q  574 cggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||    
T  12734471 cggcgatccgcatctacgaagctgcagagaaagatcgtggtgaagtt 12734517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 273 - 618
Target Start/End: Original strand, 29917102 - 29917447
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||||||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  29917102 aagggttaaatatgtttttgatccctacgttttgcgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccctacattttttctccgt 29917201  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    ||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29917202 tagtgcaattggtccctgccatcagtgccatgttgatgaaacacaaaccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 29917301  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||    
T  29917302 acacccgcaacaacaagcgctttcaacgacaacatcatcgctttcggcctccaaatcttcccctctaaaccaacatttttcaccggaagcgtgacgaaca 29917401  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaag 618  Q
    || ||||||||  ||||||| |||| ||||||||||||||||||||    
T  29917402 ccagcgatccgtgtctacgacgctgaggagaaagatcgtggtgaag 29917447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 441 - 618
Target Start/End: Original strand, 42253302 - 42253479
Alignment:
Q  441 caccccaccaaatctccaccacaacaccttccacaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaa 540  Q
    ||||||||||||||||||||||||||||||| |||||  || || |||||||||||||||| | ||||||||| ||||||||||||||||||||||||||    
T  42253302 caccccaccaaatctccaccacaacaccttctacaccagcagcagcaagcgctttcaacgacagcatcatcgctttcggcctccaaatcttcccctctaa 42253401  T
Q  541 accaacatatttcactggaagtgtgacgaacaccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaag 618  Q
    ||||||| |||| || ||||| || || || ||||||||||||  ||||||| |||| ||||||||||||||||||||    
T  42253402 accaacagatttaaccggaagcgtcacaaataccggcgatccgagtctacgacgctgtggagaaagatcgtggtgaag 42253479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 274 - 375
Target Start/End: Complemental strand, 29917629 - 29917528
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    |||||| |||||||||||| ||||||||||||   ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||| |||    
T  29917629 agggttaaatatgtttttggtccctacattttgcacgattttgagaatagtccttacatttcaataaatgtttttaaaatccctacattttttctccgtt 29917530  T
Q  374 ag 375  Q
    ||    
T  29917529 ag 29917528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 281 - 391
Target Start/End: Complemental strand, 12734689 - 12734578
Alignment:
Q  281 aatatgtttttgatccctacattttatgcgattttgagagt-agtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgca 379  Q
    |||||||||||| ||||||| ||||   ||||||||||| | ||| | |||||||||||||||||||||||||||||||||||||||||  ||||||| |    
T  12734689 aatatgtttttggtccctacgttttgcacgattttgagaattagttcttacatttcaataaatgtttttaaaatccctacatttttcctgagttagtgta 12734590  T
Q  380 attggtccctgc 391  Q
    | | ||||||||    
T  12734589 aatagtccctgc 12734578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 273 - 369
Target Start/End: Original strand, 24845960 - 24846056
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctc 369  Q
    ||||||| ||| |||||||  || |||||||||   | ||||||||| |||||| |||||||||||||||||||||||||| |||| ||||||||||    
T  24845960 aagggttaaatctgtttttagtctctacattttgcacaattttgagaatagtccttacatttcaataaatgtttttaaaattcctatatttttcctc 24846056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 275 - 374
Target Start/End: Original strand, 36155270 - 36155370
Alignment:
Q  275 gggttcaatatgtttttgatccctacattttatgcgattttgag-agtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtt 373  Q
    ||||| |||||| | ||| |||||||||||| ||||| |||||  | |||||||||||||| |||||||||||||||||||| ||||||||| ||| |||    
T  36155270 gggttaaatatgctattggtccctacattttgtgcgactttgaataatagtccctacattttaataaatgtttttaaaatccttacatttttactccgtt 36155369  T
Q  374 a 374  Q
    |    
T  36155370 a 36155370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 328 - 375
Target Start/End: Original strand, 4624413 - 4624460
Alignment:
Q  328 tacatttcaataaatgtttttaaaatccctacatttttcctctgttag 375  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  4624413 tacatttcaataaatgtttttaaaatccctacatttttcctccgttag 4624460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 303 - 364
Target Start/End: Original strand, 22601526 - 22601587
Alignment:
Q  303 tttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    ||||||| ||||||||| |||||||||||||| |||||||||||||||||| | ||||||||    
T  22601526 tttatgcaattttgagaatagtccctacatttaaataaatgtttttaaaattcttacatttt 22601587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 321 - 374
Target Start/End: Original strand, 26720367 - 26720420
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    |||||||||||||||| ||||| |||||||||||||||||||||| ||||||||    
T  26720367 tagtccctacatttcattaaatatttttaaaatccctacattttttctctgtta 26720420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 281 - 392
Target Start/End: Complemental strand, 20683009 - 20682897
Alignment:
Q  281 aatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgca 379  Q
    |||||||| ||| |||||||||||   |||||||| | || | |||| ||||||| ||||||||||||||||||| | |||||||| ||| |||||| ||    
T  20683009 aatatgttattggtccctacatttagcgcgattttaaagaatggtccttacattttaataaatgtttttaaaatctccacatttttactccgttagtaca 20682910  T
Q  380 attggtccctgcc 392  Q
    |||||||| ||||    
T  20682909 attggtccttgcc 20682897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 274 - 363
Target Start/End: Complemental strand, 4694524 - 4694434
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttgagag-tagtccctacatttcaataaatgtttttaaaatccctacattt 363  Q
    |||||| |||||||||||  |||||| |||||| ||  |||||| |  |||||||||||||| | ||||||||||||||||||||||||||    
T  4694524 agggttaaatatgtttttagtccctatattttacgctcttttgataaatagtccctacatttaagtaaatgtttttaaaatccctacattt 4694434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 281 - 374
Target Start/End: Original strand, 44148582 - 44148676
Alignment:
Q  281 aatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    |||||||||||  ||||||||||||| ||  |||||| || |||||||||||||| |||||| |||||||||||||  |||||||| ||| ||||    
T  44148582 aatatgtttttagtccctacattttacgctcttttgaagaatagtccctacattttaataaacgtttttaaaatcctcacatttttactccgtta 44148676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 328 - 365
Target Start/End: Original strand, 4624586 - 4624623
Alignment:
Q  328 tacatttcaataaatgtttttaaaatccctacattttt 365  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4624586 tacatttcaataaatgtttttaaaatccctacattttt 4624623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 276 - 358
Target Start/End: Complemental strand, 21006039 - 21005956
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttgagag-tagtccctacatttcaataaatgtttttaaaatcccta 358  Q
    |||| |||||||||||| ||||||||||||  | |  ||||| |  |||||| |||||||||||||||||||||||||||||||    
T  21006039 ggttaaatatgtttttggtccctacattttgcgtggctttgaaaaatagtccttacatttcaataaatgtttttaaaatcccta 21005956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 354
Target Start/End: Complemental strand, 11089207 - 11089133
Alignment:
Q  281 aatatgtttttgatccctacattttatgcgattttgagag-tagtccctacatttcaataaatgtttttaaaatc 354  Q
    |||||||||||| ||| ||||||||||| || ||||| |  |||| | |||||||||||||||||||||||||||    
T  11089207 aatatgtttttggtccatacattttatgtgactttgaaaaatagttcttacatttcaataaatgtttttaaaatc 11089133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 273 - 364
Target Start/End: Complemental strand, 36156452 - 36156359
Alignment:
Q  273 aagggttcaatatgtttttgatccct-acattttatgcgattttgag-agtagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    ||||||| |||||||||||| | ||| | ||||||||||| |||||  | |||||  | |||||||||||||||||||||||||| ||||||||    
T  36156452 aagggttaaatatgtttttggttccttatattttatgcgactttgaataatagtctttgcatttcaataaatgtttttaaaatccttacatttt 36156359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 358
Target Start/End: Original strand, 44024398 - 44024481
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttgagag-tagtccctacatttcaataaatgtttttaaaatcccta 358  Q
    |||| |||||||||||| ||| ||||||||  | || ||||| |  |||||| ||||||||||||||| |||||||||||||||    
T  44024398 ggttaaatatgtttttggtccttacattttgcgtgactttgaaaaatagtccttacatttcaataaatatttttaaaatcccta 44024481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 328 - 358
Target Start/End: Original strand, 6297688 - 6297718
Alignment:
Q  328 tacatttcaataaatgtttttaaaatcccta 358  Q
    |||||||||||||||||||||||||||||||    
T  6297688 tacatttcaataaatgtttttaaaatcccta 6297718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 283 - 364
Target Start/End: Complemental strand, 6297945 - 6297863
Alignment:
Q  283 tatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||||||  ||||||||||||  | || ||||| || |||||| ||||||||| ||||||||||||||||||  |||||||    
T  6297945 tatgtttttcgtccctacattttgcgtgactttgaagaatagtccttacatttcattaaatgtttttaaaatcctcacatttt 6297863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 374
Target Start/End: Original strand, 6297508 - 6297561
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    |||| ||||||||||| ||||||||||||||||||  |||||||  ||||||||    
T  6297508 tagttcctacatttcattaaatgtttttaaaatcctcacattttctctctgtta 6297561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 354
Target Start/End: Original strand, 13315248 - 13315281
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatc 354  Q
    |||||||||||||||| |||||||||||||||||    
T  13315248 tagtccctacatttcattaaatgtttttaaaatc 13315281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 374
Target Start/End: Original strand, 16662214 - 16662267
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    |||||||||||||||| |||||||||||||||| |  |||||||  ||||||||    
T  16662214 tagtccctacatttcattaaatgtttttaaaattctcacattttatctctgtta 16662267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 374
Target Start/End: Original strand, 17914243 - 17914296
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgtta 374  Q
    |||||||||||||| | ||||||||||||||||||  |||||||  ||||||||    
T  17914243 tagtccctacattttattaaatgtttttaaaatcctcacattttatctctgtta 17914296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 386
Target Start/End: Original strand, 20682754 - 20682819
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgcaattggtc 386  Q
    |||||| ||||||| |||||||||||||||||||   | |||||| ||| |||||| |||||||||    
T  20682754 tagtccttacattttaataaatgtttttaaaatcttcatatttttactccgttagtacaattggtc 20682819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 354
Target Start/End: Original strand, 34614016 - 34614096
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttga-gagtagtccctacatttcaataaatgtttttaaaatc 354  Q
    |||||| |||||||| ||||||  ||||||||  |||| ||||| || |||||  |||||||||||||||||||||||||||    
T  34614016 agggttaaatatgttattgatctttacattttgcgcgactttgaagaatagtca-tacatttcaataaatgtttttaaaatc 34614096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 274 - 353
Target Start/End: Original strand, 10047477 - 10047556
Alignment:
Q  274 agggttcaatatgtttttgatccctacattttatgcgattttg-agagtagtccctacatttcaataaatgtttttaaaat 353  Q
    |||||| ||||||||||| |||| ||||||||  ||  ||||| ||| ||||||||||| |||| ||||||||||||||||    
T  10047477 agggttaaatatgtttttaatccttacattttgcgcccttttgaagaatagtccctaca-ttcattaaatgtttttaaaat 10047556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 240; Significance: 1e-132; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 273 - 620
Target Start/End: Original strand, 39418 - 39765
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |  ||    
T  39418 aagggttaaatatgtttttggtccctacattttatgcgattttgagaataatccctacatttcaataaatgtttttaaaatccctacatttttctttcgt 39517  T
Q  373 tagtgcaattggtccctgccatcagtgtcatgttgatgaaacacaggccatcataacaagttcaaccccaccccaccaaatctccaccacaacaccttcc 472  Q
    | ||||||||||||| |||| |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39518 tggtgcaattggtccttgccttcagtgtcatattgatgaaacacaagccatcataacaagttcaaacccaccccaccaaatctccaccacaacaccttcc 39617  T
Q  473 acaccctcaacaacaagcgctttcaacgataacatcatcgccttcggcctccaaatcttcccctctaaaccaacatatttcactggaagtgtgacgaaca 572  Q
    |||||| ||||| ||| | |||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||| ||| |||||||    
T  39618 acacccgcaacagcaaacactttcaacgataacatcatcgctttcggcctccaaatctttccatctaaaccaacatatttcactggaaatgtcacgaaca 39717  T
Q  573 ccggcgatccgcatctacgaagctgcggagaaagatcgtggtgaagtt 620  Q
    | ||||||| |||||||||| | |||||||||||| ||||||||||||    
T  39718 ctggcgatctgcatctacgacgttgcggagaaagaccgtggtgaagtt 39765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 273 - 375
Target Start/End: Complemental strand, 39944 - 39842
Alignment:
Q  273 aagggttcaatatgtttttgatccctacattttatgcgattttgagagtagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgt 372  Q
    ||||||| |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  39944 aagggttaaatatgtttttggtccctacattttacgcgattttgagaatagtccctacatttcaataaatgtttttaaaatccttacatttttcctccgt 39845  T
Q  373 tag 375  Q
    |||    
T  39844 tag 39842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 321 - 392
Target Start/End: Original strand, 29320 - 29391
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttttcctctgttagtgcaattggtccctgcc 392  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| || |||||  ||| | |||||||||    
T  29320 tagtccttacatttcaataaatgtttttaaaatccctacatttttcatccgttagcacaaatagtccctgcc 29391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 321 - 365
Target Start/End: Complemental strand, 33038 - 32994
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacattttt 365  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  33038 tagtccttacatttcaataaatgtttttaaaatccctacattttt 32994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 276 - 354
Target Start/End: Original strand, 107895 - 107974
Alignment:
Q  276 ggttcaatatgtttttgatccctacattttatgcgattttgagag-tagtccctacatttcaataaatgtttttaaaatc 354  Q
    |||| |||||||||||| ||||||||||||  | |||||||| |  |||||| |||||||||||||||||||||||||||    
T  107895 ggttaaatatgtttttggtccctacattttccgtgattttgaaaaatagtccttacatttcaataaatgtttttaaaatc 107974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 107768 - 107811
Alignment:
Q  321 tagtccctacatttcaataaatgtttttaaaatccctacatttt 364  Q
    |||||||||||||||||||||| ||||||||||||  |||||||    
T  107768 tagtccctacatttcaataaatatttttaaaatcctcacatttt 107811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University