View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20651_high_4 (Length: 234)
Name: NF20651_high_4
Description: NF20651
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20651_high_4 |
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Alignment Details
Target: chr4 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 27600812 - 27601038
Alignment:
| Q |
1 |
tattaatattattcacttcannnnnnnctatttgggtttctccttctaactttaatcttcttgactgaccaaccaatacaaaatgttttatattgttata |
100 |
Q |
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| T |
27600812 |
tattaatattattcacttcatttttttctatttgggtttctccttctaactttaatcttcttgac----caaccaatacaaaatgttgtatattgttata |
27600907 |
T |
|
| Q |
101 |
taaaatataatgtttcttcaacagaagctaaattgccatgacattctgaagagtttgctattgaaaaattcaacatcaatagttcagttgctggcatttt |
200 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27600908 |
taaaatataatgtttcttccacagaagctaaattgccatgacattctgaaaagtttgctattgaaaaattcaacatcaatagttcagttgctggcatttt |
27601007 |
T |
|
| Q |
201 |
gtagtttagccacattttcttcttctcactc |
231 |
Q |
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|||||||||||||||||||||||||| |||| |
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| T |
27601008 |
gtagtttagccacattttcttcttcttactc |
27601038 |
T |
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