View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20652_high_6 (Length: 337)

Name: NF20652_high_6
Description: NF20652
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20652_high_6
NF20652_high_6
[»] chr5 (14 HSPs)
chr5 (9-313)||(22750945-22751249)
chr5 (57-313)||(38144532-38144786)
chr5 (62-313)||(28370055-28370304)
chr5 (62-313)||(19512191-19512441)
chr5 (52-253)||(23528497-23528695)
chr5 (14-126)||(23111150-23111264)
chr5 (62-126)||(18407944-18408008)
chr5 (61-117)||(22438747-22438803)
chr5 (61-116)||(19236900-19236955)
chr5 (61-114)||(22461158-22461211)
chr5 (61-114)||(22467782-22467835)
chr5 (61-116)||(20781744-20781799)
chr5 (61-90)||(17021913-17021942)
chr5 (57-117)||(42961566-42961626)
[»] chr7 (27 HSPs)
chr7 (9-313)||(18873164-18873468)
chr7 (49-313)||(15167979-15168242)
chr7 (66-313)||(10895795-10896042)
chr7 (14-313)||(14422789-14423089)
chr7 (57-313)||(12709839-12710095)
chr7 (57-313)||(13122910-13123166)
chr7 (57-274)||(13743552-13743768)
chr7 (62-313)||(16009382-16009631)
chr7 (57-253)||(12590639-12590832)
chr7 (57-253)||(13007299-13007491)
chr7 (64-258)||(16677152-16677348)
chr7 (64-258)||(17651388-17651584)
chr7 (62-117)||(11382871-11382926)
chr7 (62-117)||(11389348-11389403)
chr7 (61-117)||(20311051-20311107)
chr7 (61-117)||(21230959-21231015)
chr7 (62-125)||(13679485-13679548)
chr7 (61-116)||(2971254-2971309)
chr7 (61-116)||(20906461-20906516)
chr7 (62-116)||(11311059-11311113)
chr7 (57-97)||(831629-831669)
chr7 (57-97)||(1196809-1196849)
chr7 (57-97)||(34958578-34958618)
chr7 (62-118)||(46625961-46626017)
chr7 (61-116)||(29181109-29181164)
chr7 (61-114)||(31155396-31155449)
chr7 (61-113)||(16091078-16091130)
[»] scaffold0026 (2 HSPs)
scaffold0026 (57-313)||(11846-12102)
scaffold0026 (61-313)||(111491-111741)
[»] chr3 (25 HSPs)
chr3 (49-313)||(14762746-14763009)
chr3 (64-311)||(38310802-38311049)
chr3 (64-294)||(20247791-20248021)
chr3 (64-301)||(24192771-24193009)
chr3 (62-313)||(9534133-9534382)
chr3 (61-313)||(23370505-23370756)
chr3 (61-252)||(24933828-24934016)
chr3 (57-239)||(41455093-41455272)
chr3 (64-313)||(55499104-55499353)
chr3 (57-197)||(16801463-16801602)
chr3 (62-123)||(18929239-18929300)
chr3 (62-126)||(17240513-17240577)
chr3 (61-116)||(13302240-13302295)
chr3 (61-116)||(13323787-13323842)
chr3 (61-116)||(12033444-12033499)
chr3 (61-116)||(13312896-13312951)
chr3 (61-116)||(17131732-17131787)
chr3 (61-116)||(51301589-51301644)
chr3 (61-175)||(10389443-10389557)
chr3 (61-175)||(10414532-10414646)
chr3 (61-175)||(10421202-10421316)
chr3 (61-116)||(14865846-14865901)
chr3 (61-96)||(23392819-23392854)
chr3 (64-118)||(16801027-16801081)
chr3 (61-97)||(2247649-2247685)
[»] scaffold1773 (1 HSPs)
scaffold1773 (57-313)||(983-1237)
[»] scaffold0006 (1 HSPs)
scaffold0006 (57-313)||(49984-50238)
[»] chr4 (16 HSPs)
chr4 (57-313)||(8045828-8046083)
chr4 (57-316)||(11847908-11848173)
chr4 (61-175)||(53483646-53483760)
chr4 (61-117)||(15408139-15408195)
chr4 (62-118)||(8834895-8834951)
chr4 (62-118)||(13888641-13888697)
chr4 (64-116)||(14486661-14486713)
chr4 (62-118)||(15245215-15245271)
chr4 (67-118)||(22724691-22724742)
chr4 (62-118)||(15308120-15308176)
chr4 (57-97)||(15747552-15747592)
chr4 (61-116)||(16146830-16146885)
chr4 (61-116)||(27906266-27906321)
chr4 (62-92)||(15069781-15069811)
chr4 (62-92)||(15076381-15076411)
chr4 (61-118)||(14912081-14912138)
[»] scaffold0924 (1 HSPs)
scaffold0924 (57-313)||(746-1002)
[»] scaffold0029 (1 HSPs)
scaffold0029 (57-281)||(111717-111942)
[»] chr6 (30 HSPs)
chr6 (57-313)||(29614142-29614398)
chr6 (49-295)||(23057760-23058005)
chr6 (14-313)||(23839003-23839303)
chr6 (62-274)||(4477700-4477912)
chr6 (61-313)||(10986180-10986431)
chr6 (57-313)||(18800242-18800497)
chr6 (57-196)||(930091-930229)
chr6 (64-313)||(21565214-21565462)
chr6 (57-253)||(12168230-12168422)
chr6 (57-253)||(19287139-19287331)
chr6 (57-253)||(19785865-19786057)
chr6 (57-253)||(19878323-19878515)
chr6 (57-253)||(19884099-19884291)
chr6 (61-144)||(34639986-34640069)
chr6 (61-144)||(34646660-34646743)
chr6 (61-175)||(25469704-25469816)
chr6 (61-117)||(24512843-24512899)
chr6 (62-114)||(9187498-9187550)
chr6 (62-118)||(25348486-25348542)
chr6 (30-118)||(25397172-25397261)
chr6 (64-118)||(25598643-25598697)
chr6 (61-126)||(31252413-31252478)
chr6 (62-118)||(19471335-19471391)
chr6 (64-118)||(2286769-2286823)
chr6 (61-150)||(11288668-11288758)
chr6 (62-96)||(18659450-18659484)
chr6 (62-96)||(24441673-24441707)
chr6 (61-114)||(15458492-15458545)
chr6 (61-114)||(15465087-15465140)
chr6 (61-89)||(28288509-28288537)
[»] scaffold0117 (2 HSPs)
scaffold0117 (57-313)||(1893-2148)
scaffold0117 (57-313)||(8570-8825)
[»] scaffold0025 (1 HSPs)
scaffold0025 (64-301)||(14398-14635)
[»] chr1 (16 HSPs)
chr1 (14-313)||(20436974-20437274)
chr1 (57-175)||(41111977-41112094)
chr1 (7-126)||(32651563-32651682)
chr1 (62-126)||(18712790-18712854)
chr1 (62-117)||(19663517-19663572)
chr1 (62-118)||(20805320-20805376)
chr1 (62-117)||(11158093-11158148)
chr1 (64-118)||(10811785-10811839)
chr1 (61-116)||(20851132-20851187)
chr1 (61-116)||(20857759-20857814)
chr1 (61-116)||(21706276-21706331)
chr1 (61-116)||(21710818-21710873)
chr1 (62-92)||(24476350-24476380)
chr1 (62-92)||(25091418-25091448)
chr1 (63-96)||(18271338-18271371)
chr1 (63-96)||(18275992-18276025)
[»] chr8 (15 HSPs)
chr8 (57-313)||(23866418-23866674)
chr8 (61-313)||(44477428-44477678)
chr8 (61-313)||(44492586-44492836)
chr8 (64-313)||(8727735-8727984)
chr8 (57-253)||(17054458-17054650)
chr8 (7-118)||(18614271-18614382)
chr8 (153-313)||(27940946-27941104)
chr8 (14-126)||(23482003-23482117)
chr8 (62-118)||(39364919-39364975)
chr8 (49-116)||(29643374-29643440)
chr8 (61-117)||(14056563-14056619)
chr8 (61-117)||(25111976-25112032)
chr8 (61-116)||(24320670-24320725)
chr8 (62-118)||(21931696-21931752)
chr8 (57-117)||(27940847-27940907)
[»] chr2 (17 HSPs)
chr2 (49-313)||(19661442-19661703)
chr2 (62-313)||(6483523-6483772)
chr2 (62-313)||(6486990-6487239)
chr2 (57-258)||(26583687-26583886)
chr2 (64-313)||(23089057-23089305)
chr2 (64-313)||(23878813-23879060)
chr2 (62-313)||(23101463-23101713)
chr2 (61-175)||(5706023-5706137)
chr2 (62-126)||(23265133-23265197)
chr2 (62-126)||(23280201-23280265)
chr2 (62-123)||(21908353-21908414)
chr2 (62-118)||(24661576-24661632)
chr2 (61-116)||(10577-10632)
chr2 (61-116)||(25180929-25180984)
chr2 (61-116)||(26885183-26885237)
chr2 (61-114)||(23168298-23168351)
chr2 (61-114)||(23579555-23579608)
[»] scaffold0247 (1 HSPs)
scaffold0247 (57-313)||(11146-11401)
[»] scaffold0553 (1 HSPs)
scaffold0553 (61-313)||(10195-10446)
[»] scaffold0544 (1 HSPs)
scaffold0544 (61-313)||(1525-1776)
[»] scaffold0058 (1 HSPs)
scaffold0058 (57-301)||(109-350)
[»] scaffold0090 (1 HSPs)
scaffold0090 (57-313)||(17973-18229)
[»] scaffold0456 (4 HSPs)
scaffold0456 (9-144)||(8049-8184)
scaffold0456 (9-144)||(904-1039)
scaffold0456 (207-301)||(806-899)
scaffold0456 (207-301)||(7951-8044)
[»] scaffold0154 (1 HSPs)
scaffold0154 (57-181)||(30792-30917)
[»] scaffold0476 (1 HSPs)
scaffold0476 (64-313)||(3295-3544)
[»] scaffold0077 (1 HSPs)
scaffold0077 (64-313)||(3624-3872)
[»] scaffold0796 (2 HSPs)
scaffold0796 (57-252)||(1728-1920)
scaffold0796 (57-252)||(5751-5943)
[»] scaffold0634 (1 HSPs)
scaffold0634 (221-313)||(3466-3558)
[»] scaffold0004 (2 HSPs)
scaffold0004 (15-126)||(116887-116998)
scaffold0004 (63-96)||(60441-60474)
[»] scaffold0129 (1 HSPs)
scaffold0129 (61-173)||(45274-45386)
[»] scaffold0222 (1 HSPs)
scaffold0222 (62-126)||(16811-16875)
[»] scaffold0461 (1 HSPs)
scaffold0461 (62-126)||(8-72)
[»] scaffold0310 (1 HSPs)
scaffold0310 (61-117)||(17643-17699)
[»] scaffold0146 (1 HSPs)
scaffold0146 (62-126)||(13623-13687)
[»] scaffold0107 (1 HSPs)
scaffold0107 (61-117)||(40531-40587)
[»] scaffold0020 (1 HSPs)
scaffold0020 (62-126)||(101928-101992)
[»] scaffold0019 (1 HSPs)
scaffold0019 (61-117)||(135473-135529)
[»] scaffold0139 (1 HSPs)
scaffold0139 (9-117)||(14944-15052)
[»] scaffold0235 (1 HSPs)
scaffold0235 (63-115)||(22594-22646)
[»] scaffold0124 (2 HSPs)
scaffold0124 (62-117)||(34276-34331)
scaffold0124 (61-118)||(35438-35495)
[»] scaffold0138 (1 HSPs)
scaffold0138 (62-118)||(12296-12352)
[»] scaffold0317 (1 HSPs)
scaffold0317 (62-125)||(1378-1441)
[»] scaffold0815 (1 HSPs)
scaffold0815 (57-113)||(1453-1509)
[»] scaffold0096 (1 HSPs)
scaffold0096 (58-118)||(39503-39563)
[»] scaffold0348 (1 HSPs)
scaffold0348 (61-116)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (61-116)||(10239-10294)
[»] scaffold0028 (1 HSPs)
scaffold0028 (9-114)||(69749-69855)
[»] scaffold0023 (1 HSPs)
scaffold0023 (61-116)||(135438-135493)
[»] scaffold0001 (1 HSPs)
scaffold0001 (61-116)||(493028-493082)
[»] scaffold2054 (1 HSPs)
scaffold2054 (57-150)||(680-774)
[»] scaffold1318 (1 HSPs)
scaffold1318 (62-116)||(1913-1967)
[»] scaffold0610 (1 HSPs)
scaffold0610 (7-76)||(6540-6609)
[»] scaffold0609 (1 HSPs)
scaffold0609 (61-126)||(5857-5922)
[»] scaffold0335 (1 HSPs)
scaffold0335 (62-118)||(2628-2684)
[»] scaffold0261 (1 HSPs)
scaffold0261 (61-116)||(23569-23624)
[»] scaffold0053 (2 HSPs)
scaffold0053 (61-116)||(79490-79545)
scaffold0053 (28-95)||(79057-79125)
[»] scaffold0790 (1 HSPs)
scaffold0790 (57-90)||(5480-5513)
[»] scaffold0481 (1 HSPs)
scaffold0481 (63-108)||(676-721)
[»] scaffold0249 (1 HSPs)
scaffold0249 (61-114)||(13894-13947)
[»] scaffold0600 (1 HSPs)
scaffold0600 (62-118)||(732-788)
[»] scaffold0180 (1 HSPs)
scaffold0180 (62-111)||(11630-11681)
[»] scaffold0034 (1 HSPs)
scaffold0034 (64-116)||(73285-73337)
[»] scaffold0031 (2 HSPs)
scaffold0031 (62-118)||(121902-121958)
scaffold0031 (62-118)||(132778-132834)


Alignment Details
Target: chr5 (Bit Score: 245; Significance: 1e-136; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 9 - 313
Target Start/End: Complemental strand, 22751249 - 22750945
Alignment:
Q  9 gagatgaacaagtagagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctataatttc 108  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  22751249 gagaagaacaagtatagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactttctctcgataatcataatctataatttc 22751150  T
Q  109 tgaaaattgacctaattgcttagttttggaaaataaattgagggttaggatttgatgatgattctgaagggaaatgggtaatgatcatgataattccctt 208  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  22751149 tgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctctt 22751050  T
Q  209 gtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcatacattgattgaaatttatgaatgattagatcaattgatgaatttgtgta 308  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||| ||||| ||| ||||||||||||||||||    
T  22751049 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 22750950  T
Q  309 tgatg 313  Q
    |||||    
T  22750949 tgatg 22750945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 57 - 313
Target Start/End: Original strand, 38144532 - 38144786
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  38144532 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaataaattgagggttag 38144631  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgat 256  Q
    | |||||||||||||||| |||| |||||||| |||||||| ||||||  ||||||| ||||||| |||||||||||||||||| |  ||||| ||||||    
T  38144632 ggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgat 38144730  T
Q  257 catacattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    |||| ||||||||||| ||| || ||||| ||| ||||||||||  | |||||||||    
T  38144731 cataaattgattgaaa-ttacgattgattggatgaattgatgaagatttgtatgatg 38144786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 62 - 313
Target Start/End: Original strand, 28370055 - 28370304
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttaggattt 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 28370154  T
Q  162 gatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcatac 261  Q
    |||||||||| || |||| |||||||| |||||||| ||||||  ||||||  ||||||| |||||||||||||||||| |  ||||| ||||||||||     
T  28370155 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 28370253  T
Q  262 attgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    ||||||||||| |||||| ||||  ||| ||||||||||  | |||||||||    
T  28370254 attgattgaaa-ttatgattgatgggatgaattgatgaagatttgtatgatg 28370304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 62 - 313
Target Start/End: Complemental strand, 19512441 - 19512191
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttaggatt 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||| ||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 19512342  T
Q  161 tgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata 260  Q
    ||||||||||| || |||| |||||||| |||||||| ||||||  ||||||  ||||||| |||||||||||||||||| |  ||||| ||||||||||    
T  19512341 tgatgatgattttg-aggggaatgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 19512243  T
Q  261 cattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
     ||||||||||| |||||| ||||| ||| ||||||||||  | |||||||||    
T  19512242 aattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatg 19512191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 52 - 253
Target Start/End: Complemental strand, 23528695 - 23528497
Alignment:
Q  52 cttctaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagg 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||      
T  23528695 cttctaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaa 23528597  T
Q  152 gttaggatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgct 251  Q
    |||||| ||||||||||||||||| ||  |||| |||| ||| ||| || ||  |||| ||| ||||||| |||| |||| |||||||  ||||||||||    
T  23528596 gttagggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgct 23528499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 23111150 - 23111264
Alignment:
Q  14 gaacaagtagagtcagagaatccggtcgttgtgcgtttcttcta--aaactaaggtaagggtgagactatctctcaataatcataatctataatttctga 111  Q
    |||||||| ||||||||||||||| | ||||||| ||| |||    ||| ||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  23111150 gaacaagtggagtcagagaatccgattgttgtgcttttgttcatctaaattaaggtaagggtgagactatctctcaataatcatagtatataatttctga 23111249  T
Q  112 aaattgacctaattg 126  Q
    ||||||| |||||||    
T  23111250 aaattgatctaattg 23111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 18407944 - 18408008
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 22438747 - 22438803
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22438747 ctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 19236955 - 19236900
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  19236955 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 22461211 - 22461158
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 114  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22461211 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 22467835 - 22467782
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 114  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||    
T  22467835 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 20781799 - 20781744
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||||| ||||| ||| |||||||||||||    
T  20781799 ctaaggtaagggtgggattatctttcaataattataatatatgatttctgaaaatt 20781744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 17021913 - 17021942
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaata 90  Q
    ||||||||||||||||||||||||||||||    
T  17021913 ctaaggtaagggtgagactatctctcaata 17021942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 42961626 - 42961566
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||| ||| |  ||||| || ||||| ||| ||||||||||||||    
T  42961626 aaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg 42961566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 9 - 313
Target Start/End: Complemental strand, 18873468 - 18873164
Alignment:
Q  9 gagatgaacaagtagagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctataatttc 108  Q
    |||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  18873468 gagaagaacaagtatagtcagagaatccggccgttgtgcgtttcttctaaaactaaggtaagggtgagactttctctcgataatcataatctataatttc 18873369  T
Q  109 tgaaaattgacctaattgcttagttttggaaaataaattgagggttaggatttgatgatgattctgaagggaaatgggtaatgatcatgataattccctt 208  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  18873368 tgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctctt 18873269  T
Q  209 gtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcatacattgattgaaatttatgaatgattagatcaattgatgaatttgtgta 308  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||| ||||| ||| ||||||||||||||||||    
T  18873268 gtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 18873169  T
Q  309 tgatg 313  Q
    |||||    
T  18873168 tgatg 18873164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 49 - 313
Target Start/End: Complemental strand, 15168242 - 15167979
Alignment:
Q  49 tttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattg 148  Q
    |||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  15168242 tttcttctaaat-taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattg 15168144  T
Q  149 agggttaggatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgtt 248  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  15168143 agggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgct 15168044  T
Q  249 gctgtgatcatacattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    |||||||||||| ||||||||||| |||||| ||||| ||| |||||||||||||||||||||||    
T  15168043 gctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 15167979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 66 - 313
Target Start/End: Original strand, 10895795 - 10896042
Alignment:
Q  66 gtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttaggatttgat 164  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||| |||||||| |||||||| ||||||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgat 10895894  T
Q  165 gatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcatacatt 264  Q
    ||||||||||| ||||| |||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  10895895 gatgattctgaggggaa-tgggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 10895993  T
Q  265 gattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    |||||||| |||||| ||||| ||| |||||||||||||||||||||||    
T  10895994 gattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 10896042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 14 - 313
Target Start/End: Complemental strand, 14423089 - 14422789
Alignment:
Q  14 gaacaagtagagtcagagaatccggtcgttgtgcgtttcttcta--aaactaaggtaagggtgagactatctctcaataatcataatctataatttctga 111  Q
    |||||||| ||||||||||||||| | ||||||  ||| |||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14423089 gaacaagtggagtcagagaatccgattgttgtgtttttgttcatctaaactaaggtaagggtgagactatctctcaataatcataatctataatttctga 14422990  T
Q  112 aaattgacctaattgcttag-ttttggaaaataaattgagggttaggatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgt 210  Q
    |||||||||||||||| ||| |||||||| ||||||||||||||||| |||||||||||||||| |||| |||||||| |||||||| ||||||  ||||    
T  14422989 aaattgacctaattgcatagtttttggaagataaattgagggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgt 14422891  T
Q  211 aatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcatacattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatg 310  Q
    ||| ||||||| |||||||||||||||||| | |||||| |||||||||| ||||||||||| |||||| ||||| ||| ||||||||||  | ||||||    
T  14422890 aatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcataaattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatg 14422792  T
Q  311 atg 313  Q
    |||    
T  14422791 atg 14422789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 57 - 313
Target Start/End: Original strand, 12709839 - 12710095
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  12709839 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 12709937  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtga 255  Q
    | ||||||||||||| ||||| ||||||||||||||||||| ||||||   |||||||||||||||||||||  |||||||||| |||||||||||||||    
T  12709938 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttgctgtga 12710036  T
Q  256 tcatacattga-ttgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    || || | ||| ||| ||||||||| ||||| ||| |||||||||||||||||||||||    
T  12710037 tcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatg 12710095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 57 - 313
Target Start/End: Original strand, 13122910 - 13123166
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13122910 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 13123008  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtga 255  Q
    | ||||||||||||| ||||| ||||||||||||||||||| ||||||   |||||||||||||||||||||  |||||||||| |||||||||||||||    
T  13123009 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttgctgtga 13123107  T
Q  256 tcatacattga-ttgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    || || | ||| ||| ||||||||| ||||| ||| |||||||||||||||||||||||    
T  13123108 tcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatg 13123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 57 - 274
Target Start/End: Complemental strand, 13743768 - 13743552
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  13743768 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 13743670  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgat 256  Q
    | ||||||||||||| ||||| ||||||||||||||||||| |||||  |||||| |||  |||||||| |||| ||||||||| |||| ||||||||||    
T  13743669 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctatgttattgctgtgat 13743570  T
Q  257 catacattgattgaaatt 274  Q
    |||| |||| ||||||||    
T  13743569 cataaattggttgaaatt 13743552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 62 - 313
Target Start/End: Complemental strand, 16009631 - 16009382
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttaggattt 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| |||||| | |||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaaggttt 16009532  T
Q  162 gatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcatac 261  Q
    ||||||||||||| |||| |||||||| |||||||| ||||||  ||||||| ||||||| |||||||||||||||||| |  ||||| ||||||||||     
T  16009531 gatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 16009433  T
Q  262 attgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    | ||||||||| |||||| ||||| ||| ||||||||||  | |||||||||    
T  16009432 actgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatg 16009382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 57 - 253
Target Start/End: Original strand, 12590639 - 12590832
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  12590639 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaagttag 12590737  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgt 253  Q
    | ||||||||||||||||| ||  |||| |||| ||| ||| || ||  |||| ||| ||||||| ||||||||| |||||||  ||||||||||||    
T  12590738 ggtttgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatccatgttgttgctgt 12590832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 253
Target Start/End: Complemental strand, 13007491 - 13007299
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  13007491 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 13007393  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgt 253  Q
    | ||||||||||||||||| ||  |||| |||| ||| ||| || ||  |||| ||| ||||||| |||| |||| |||||||  ||||||||||||    
T  13007392 ggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgt 13007299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 64 - 258
Target Start/End: Complemental strand, 16677348 - 16677152
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaat-aaattgagggttaggattt 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| || ||||| ||||||||| |||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 16677249  T
Q  162 gatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatca 258  Q
    |||||||||| ||| | | |  | |||||||||||| ||| |   ||||||  | ||||||||||||||  | |||||| |  ||||||||||||||    
T  16677248 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca 16677152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 64 - 258
Target Start/End: Complemental strand, 17651584 - 17651388
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaat-aaattgagggttaggattt 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| || ||||| ||||||||| |||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 17651485  T
Q  162 gatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatca 258  Q
    |||||||||| ||| | | |  | |||||||||||| ||| |   ||||||  | ||||||||||||||  | |||||| |  ||||||||||||||    
T  17651484 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca 17651388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 11382871 - 11382926
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 11389348 - 11389403
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 20311051 - 20311107
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  20311051 ctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 21230959 - 21231015
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  21230959 ctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 125
Target Start/End: Complemental strand, 13679548 - 13679485
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 125  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 13679485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 2971309 - 2971254
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  2971309 ctaaggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 20906461 - 20906516
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20906461 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 11311113 - 11311059
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    ||||||||||||||||||||||||||||||| ||| | || ||||||| ||||||    
T  11311113 taaggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 831629 - 831669
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataa 97  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  831629 aaaactaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 1196809 - 1196849
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataa 97  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  1196809 aaaactaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 97
Target Start/End: Complemental strand, 34958618 - 34958578
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataa 97  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  34958618 aaaactaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 46626017 - 46625961
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||| |||||||||||||| |||||||| || ||||| ||||||||| |||||||||    
T  46626017 taagataagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 29181109 - 29181164
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||    
T  29181109 ctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaatt 29181164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 31155449 - 31155396
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 114  Q
    |||||||||||||| || ||||| ||||| || ||||| |||||||||||||||    
T  31155449 ctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 31155396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 16091130 - 16091078
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 113  Q
    |||||||||||||| || ||||| |||||| ||||||| | ||||||||||||    
T  16091130 ctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaa 16091078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 213; Significance: 1e-117; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 57 - 313
Target Start/End: Original strand, 11846 - 12102
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  11846 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagagttag 11945  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgat 256  Q
    | ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11946 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatctttgttgttgctgtgat 12045  T
Q  257 catacattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    ||||  ||||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  12046 cataagttgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 12102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 61 - 313
Target Start/End: Complemental strand, 111741 - 111491
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttaggatt 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  111741 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 111642  T
Q  161 tgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata 260  Q
    |||||||||||||| |||| |||||||| |||||||| ||||||  ||||||| ||||||| |||||||||||||||||| |  ||||| ||||||||||    
T  111641 tgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 111543  T
Q  261 cattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
     ||||||||||| |||||| ||||| ||| ||||||||||  | |||||||||    
T  111542 aattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatg 111491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 49 - 313
Target Start/End: Original strand, 14762746 - 14763009
Alignment:
Q  49 tttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattg 148  Q
    |||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  14762746 tttcttctaaat-taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattg 14762844  T
Q  149 agggttaggatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgtt 248  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  14762845 agggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgct 14762944  T
Q  249 gctgtgatcatacattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    |||||||||||| ||||||||||| |||||| ||||| ||| |||||||||||||||||||||||    
T  14762945 gctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 14763009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 64 - 311
Target Start/End: Original strand, 38310802 - 38311049
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttaggatttga 163  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  38310802 aggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttga 38310901  T
Q  164 tgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcatacat 263  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  38310902 tgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 38311001  T
Q  264 tgattgaaatttatgaatgattagatcaattgatgaatttgtgtatga 311  Q
    ||||||||| |||||| ||||| ||| ||| |||||||||||||||||    
T  38311002 tgattgaaaattatgagtgattggatgaatggatgaatttgtgtatga 38311049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 64 - 294
Target Start/End: Original strand, 20247791 - 20248021
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttaggatttga 163  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 20247890  T
Q  164 tgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcatacat 263  Q
    |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  20247891 tgatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 20247990  T
Q  264 tgattgaaatttatgaatgattagatcaatt 294  Q
    ||||||||| |||||| ||||| ||| ||||    
T  20247991 tgattgaaaattatgagtgattggatgaatt 20248021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 64 - 301
Target Start/End: Complemental strand, 24193009 - 24192771
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttaggatttg 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||| ||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 24192910  T
Q  163 atgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtg-atcatac 261  Q
    ||||||||||||||||||||||||||||||||||| ||||||  ||||||| | |||||||||||||||||||||||| || |||||||||| ||||||     
T  24192909 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttgctgtgaatcataa 24192810  T
Q  262 attgattgaaatttatgaatgattagatcaattgatgaat 301  Q
    | |||||||||  ||||| ||||| ||| |||||||||||    
T  24192809 actgattgaaa-atatgattgattggataaattgatgaat 24192771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 62 - 313
Target Start/End: Complemental strand, 9534382 - 9534133
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttaggattt 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 9534283  T
Q  162 gatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcatac 261  Q
    ||||||||||||| || | |||||||| |||||||| ||||||  ||||||| ||||||| |||||||||||||||||| |  |||||  |||||||||     
T  9534282 gatgatgattctg-agtggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgtcgtgatcataa 9534184  T
Q  262 attgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    ||||||||||| |||||| ||||| ||| ||||||||||  | |||||||||    
T  9534183 attgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatg 9534133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 61 - 313
Target Start/End: Original strand, 23370505 - 23370756
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttaggat 159  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||| |    
T  23370505 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 23370604  T
Q  160 ttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcat 259  Q
    ||||||||||||||| |||| |||||||| |||||||| ||||||  ||||||| ||||||| |||||||||||||||||| |  ||||| |||||||||    
T  23370605 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 23370703  T
Q  260 acattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    | ||||||||||| |||||| ||||| ||| ||||||||||  | |||||||||    
T  23370704 aaattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatg 23370756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 61 - 252
Target Start/End: Original strand, 24933828 - 24934016
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttaggatt 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||   ||||| ||    
T  24933828 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtt 24933926  T
Q  161 tgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctg 252  Q
    ||||||||||||||| ||  |||| |||| ||| ||| || ||  || | ||| ||||||| ||||||||| |||||||  |||||||||||    
T  24933927 tgatgatgattctgatgg--aatgagtaaagatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgttgttgctg 24934016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 57 - 239
Target Start/End: Original strand, 41455093 - 41455272
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||   |||   ||||    
T  41455093 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataggatgaaaattag 41455191  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatc 239  Q
    |  |||||||||||||||| ||  |||| |||| ||| ||| || ||  |||| ||| ||||||  ||||||||| |||||||    
T  41455192 ggattgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttgaaatttaatgtcaagaatgaaatcttaatc 41455272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 64 - 313
Target Start/End: Original strand, 55499104 - 55499353
Alignment:
Q  64 aggtaagggtgagactatctctcaataatc-ataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgagggttaggattt 161  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| | ||||||||||||| ||||||   |||   |  ||||||||||||||| |||    
T  55499104 aggtaagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaaccttgaggataaaattgagggttagggttt 55499203  T
Q  162 gatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcatac 261  Q
    |||||||||||||| ||||| ||||||||||||||| |||||   ||||||| | |||||| |||||||| |||||||| |   |||||||||||||||     
T  55499204 gatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatacagttgctgtgatcataa 55499302  T
Q  262 attgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    |||||||||||  ||| | ||||| ||| ||||||| || || |||||||||    
T  55499303 attgattgaaa-atataattgattggatgaattgatcaagttttgtatgatg 55499353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 57 - 197
Target Start/End: Original strand, 16801463 - 16801602
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaat-aaattgagggtta 155  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||| ||| ||| || ||||||| |||||    
T  16801463 aaaactaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttgaagataaaattgaaggtta 16801561  T
Q  156 ggatttgatgatgattctgaagggaaatgggtaatgatcatg 197  Q
    ||  |||||||||||| ||| | |||  | ||||||||||||    
T  16801562 gg-gttgatgatgattttgaggagaatggtgtaatgatcatg 16801602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 18929300 - 18929239
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 123  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 17240513 - 17240577
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 13302240 - 13302295
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    ||||||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  13302240 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 13323787 - 13323842
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    ||||||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  13323787 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 12033444 - 12033499
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  12033444 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 13312896 - 13312951
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    ||||||||||||||||| ||||| |||||||||||||| | |||||| ||||||||    
T  13312896 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 17131787 - 17131732
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  17131787 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 51301644 - 51301589
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    ||||||||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  51301644 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 175
Target Start/End: Original strand, 10389443 - 10389557
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttaggatt 160  Q
    |||||||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | |||||||  |||||||  | |||||  |||   ||||| ||    
T  10389443 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10389542  T
Q  161 tgatgatgattctga 175  Q
    |||||||||||||||    
T  10389543 tgatgatgattctga 10389557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 175
Target Start/End: Original strand, 10414532 - 10414646
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttaggatt 160  Q
    |||||||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | |||||||  |||||||  | |||||  |||   ||||| ||    
T  10414532 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10414631  T
Q  161 tgatgatgattctga 175  Q
    |||||||||||||||    
T  10414632 tgatgatgattctga 10414646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 175
Target Start/End: Original strand, 10421202 - 10421316
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttaggatt 160  Q
    |||||||||||||| || ||||| ||||| || ||||| ||||||||||||||| | | |||||||  |||||||  | |||||  |||   ||||| ||    
T  10421202 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10421301  T
Q  161 tgatgatgattctga 175  Q
    |||||||||||||||    
T  10421302 tgatgatgattctga 10421316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 14865901 - 14865846
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||    
T  14865901 ctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaatt 14865846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 23392819 - 23392854
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcata 96  Q
    |||||||||||||||||||| |||||||||||||||    
T  23392819 ctaaggtaagggtgagactaactctcaataatcata 23392854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 16801081 - 16801027
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    ||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  16801081 aggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 16801027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 97
Target Start/End: Original strand, 2247649 - 2247685
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataa 97  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  2247649 ctaaggtaagggtgagactaactctcaataattataa 2247685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 57 - 313
Target Start/End: Complemental strand, 1237 - 983
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  1237 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 1139  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgat 256  Q
    | |||||||| |||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  1138 ggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatc-ttgttgttgctgtgat 1040  T
Q  257 catacattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  1039 cataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 57 - 313
Target Start/End: Complemental strand, 50238 - 49984
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  50238 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 50140  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgat 256  Q
    | |||||||| |||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  50139 ggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatc-ttgttgttgctgtgat 50041  T
Q  257 catacattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  50040 cataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 49984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 189; Significance: 1e-102; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 57 - 313
Target Start/End: Original strand, 8045828 - 8046083
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  8045828 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 8045926  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgat 256  Q
    | ||||| ||  ||||||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8045927 ggtttgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatccttgttgttgctgtgat 8046026  T
Q  257 catacattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    |||| |||||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  8046027 cataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 8046083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 57 - 316
Target Start/End: Complemental strand, 11848173 - 11847908
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaa------ttgag 150  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || |||||||| ||||| ||      |||||    
T  11848173 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatcaattgag 11848074  T
Q  151 ggttaggatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgc 250  Q
    ||||||| |||||||| |||||||||| | ||||||||||||||||| |||| |  || |||||||||||||||||||||||||||||||||||||||||    
T  11848073 ggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaaacttaatctttgttgttgc 11847974  T
Q  251 tgtgatcatacattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatgatg 316  Q
    |||||||||| ||||||||||| |||||| ||||| ||| ||||||||||||||||||||||||||    
T  11847973 tgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatgatg 11847908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 175
Target Start/End: Complemental strand, 53483760 - 53483646
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttaggat 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||| |    
T  53483760 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 53483662  T
Q  160 ttgatgatgattctga 175  Q
    ||||||||||||||||    
T  53483661 ttgatgatgattctga 53483646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 15408195 - 15408139
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  15408195 ctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 8834951 - 8834895
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  8834951 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 13888697 - 13888641
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  13888697 taaggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 14486713 - 14486661
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||||||||  ||||| |||||||| |||||||||||||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaatt 14486661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 15245271 - 15245215
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    ||||||||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15245271 taaggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  67 taagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 15308176 - 15308120
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||| |||||||||| ||| |||||||| ||| |||| |||||||||||||||||||    
T  15308176 taagttaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 15747552 - 15747592
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataa 97  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  15747552 aaaactaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 16146830 - 16146885
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||    
T  16146830 ctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaatt 16146885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 27906321 - 27906266
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    ||||| |||||||| || ||||| ||||| |||||||| |||||||||||||||||    
T  27906321 ctaagataagggtgggattatctttcaatgatcataatgtataatttctgaaaatt 27906266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 92
Target Start/End: Complemental strand, 15069811 - 15069781
Alignment:
Q  62 taaggtaagggtgagactatctctcaataat 92  Q
    |||||||||||||||||||||||||||||||    
T  15069811 taaggtaagggtgagactatctctcaataat 15069781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 92
Target Start/End: Complemental strand, 15076411 - 15076381
Alignment:
Q  62 taaggtaagggtgagactatctctcaataat 92  Q
    |||||||||||||||||||||||||||||||    
T  15076411 taaggtaagggtgagactatctctcaataat 15076381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 14912138 - 14912081
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    ||||||||||||| |||||| |||||||| ||  |||| ||||| |||||||||||||    
T  14912138 ctaaggtaagggttagactaactctcaatgattgtaatatataacttctgaaaattga 14912081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 57 - 313
Target Start/End: Original strand, 746 - 1002
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggtta 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  746 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattgagggtta 845  T
Q  156 ggatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtga 255  Q
    || |||||||| |||| |||||||||||||||||||||||||||||| | ||||||||||||||||||| || ||||||||||| ||||||||| |||||    
T  846 gggtttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatc-ttgttgttgatgtga 944  T
Q  256 tcatacattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    ||||| | |||||||||||||||| ||||| ||| |||||||||||||||||||||||    
T  945 tcataaactgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 1002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 57 - 281
Target Start/End: Complemental strand, 111942 - 111717
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa-ttgacctaattgcttagttttggaaaataaattgagggtta 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  111942 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattgagggtta 111843  T
Q  156 ggatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtga 255  Q
    || ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  111842 gggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtga 111743  T
Q  256 tcatacattgattgaaatttatgaat 281  Q
    ||||| ||||||||||||| ||||||    
T  111742 tcataaattgattgaaattgatgaat 111717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 186; Significance: 1e-101; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 57 - 313
Target Start/End: Original strand, 29614142 - 29614398
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaa-taaattgagggtta 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||| ||||||||||||||    
T  29614142 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattgagggtta 29614241  T
Q  156 ggatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtga 255  Q
    || ||||||||||||| ||||||||||||||||||||||||| |||||| |||||| |  |||||| |||||||||||||||||||||||||||||||||    
T  29614242 gggtttgatgatgattatgaagggaaatgggtaatgatcatgttaattctcttgtattg-aatgtttagaatgaaaacttaatctttgttgttgctgtga 29614340  T
Q  256 tcatacattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    |||||  ||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  29614341 tcataacttgattgaaatttatgaatgattggatgaattgatgaatttgtgtatgatg 29614398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 49 - 295
Target Start/End: Complemental strand, 23058005 - 23057760
Alignment:
Q  49 tttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattg 148  Q
    |||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||    
T  23058005 tttcttctaaat-taaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattg 23057907  T
Q  149 agggttaggatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgtt 248  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  23057906 agggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgct 23057807  T
Q  249 gctgtgatcatacattgattgaaatttatgaatgattagatcaattg 295  Q
    |||||||||||| ||||||||||| |||||| ||||| ||| |||||    
T  23057806 gctgtgatcataaattgattgaaaattatgagtgattggatgaattg 23057760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 14 - 313
Target Start/End: Complemental strand, 23839303 - 23839003
Alignment:
Q  14 gaacaagtagagtcagagaatccggtcgttgtgcgtttcttcta--aaactaaggtaagggtgagactatctctcaataatcataatctataatttctga 111  Q
    |||||||| ||||||||||||||| | ||||||| ||| |||    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23839303 gaacaagtggagtcagagaatccgattgttgtgcttttgttcatctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctga 23839204  T
Q  112 aaattgacctaattgcttagt-tttggaaaataaattgagggttaggatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgt 210  Q
    |||||||||||||||| |||| ||||||| ||||||||||||||||| ||||||||||||||| ||||| |||||||| |||||||| ||||||  ||||    
T  23839203 aaattgacctaattgcatagtgtttggaagataaattgagggttagggtttgatgatgattct-aaggggaatgggtattgatcatgttaattctgttgt 23839105  T
Q  211 aatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcatacattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatg 310  Q
    ||| |||||||||||||||||||||||||| |  ||||| |||||||||| ||||||||||| |||||| ||||| ||| ||||||||||  | ||||||    
T  23839104 aatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatg 23839006  T
Q  311 atg 313  Q
    |||    
T  23839005 atg 23839003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 62 - 274
Target Start/End: Complemental strand, 4477912 - 4477700
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttaggatt 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||| ||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtt 4477813  T
Q  161 tgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata 260  Q
    |||||||||||||| |||| |||||||| |||||||| ||||||  ||||||| ||||||| |||||||||||||||||| | |||||| ||||||||||    
T  4477812 tgatgatgattctg-aggggaatgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata 4477714  T
Q  261 cattgattgaaatt 274  Q
     |||||||||||||    
T  4477713 aattgattgaaatt 4477700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 61 - 313
Target Start/End: Original strand, 10986180 - 10986431
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttaggat 159  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||||||||| |    
T  10986180 ctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattgagggttagggt 10986279  T
Q  160 ttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcat 259  Q
    ||||||||||||||| |||| |||||||| |||||||| ||||||  ||||||| |||||||||||||||||||||||||| |  ||||| |||||||||    
T  10986280 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcat 10986378  T
Q  260 acattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    | ||||||||||| ||| || ||||| ||| ||||||||||  | |||||||||    
T  10986379 aaattgattgaaa-ttacgattgattggatgaattgatgaagatttgtatgatg 10986431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 57 - 313
Target Start/End: Complemental strand, 18800497 - 18800242
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata-aattgagggtta 155  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18800497 aaaactaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggtta 18800398  T
Q  156 ggatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtga 255  Q
    || |||||||||||||||| |||| |||| |||||||||||| ||||||  ||||||| | ||||||| ||||||| |||||||| | |||||| |||||    
T  18800397 gggtttgatgatgattctggaggg-aatgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatctatattgttgttgtga 18800299  T
Q  256 tcatacattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    ||| | |||||||||||  ||| | ||||| ||| |||||||||| ||  ||||||||    
T  18800298 tcacaaattgattgaaa-atataattgattggatgaattgatgaagtttggtatgatg 18800242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 57 - 196
Target Start/End: Original strand, 930091 - 930229
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  930091 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgagggttag 930190  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcat 196  Q
    | |||||||||| |||||||||| ||||||||||||||||    
T  930191 ggtttgatgatgtttctgaaggg-aatgggtaatgatcat 930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 64 - 313
Target Start/End: Original strand, 21565214 - 21565462
Alignment:
Q  64 aggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttaggatttg 162  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  ||||||||||||||| ||||    
T  21565214 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttg 21565313  T
Q  163 atgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataca 262  Q
    ||||||||||| ||||| ||||||||||||||||| |||||   ||||||| | | |||| |||||||| |||||||| |  |||||||||||||||| |    
T  21565314 atgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataaa 21565412  T
Q  263 ttgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    ||||||||||  ||| | ||||| ||| |||||||||| || |||||||||    
T  21565413 ttgattgaaa-atataattgattggatgaattgatgaagttctgtatgatg 21565462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 253
Target Start/End: Complemental strand, 12168422 - 12168230
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  12168422 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 12168324  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgt 253  Q
    | ||||||||||||||||| ||  |||| |||| ||| ||| || ||  |||| ||| ||||||| |||| |||| |||||||  ||||||||||||    
T  12168323 ggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgt 12168230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 253
Target Start/End: Complemental strand, 19287331 - 19287139
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  19287331 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 19287233  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgt 253  Q
    | ||||||||||||||||| ||  |||| |||| ||| ||| || ||  |||| ||| ||||||| |||| |||| |||||||  ||||||||||||    
T  19287232 ggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgt 19287139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 253
Target Start/End: Original strand, 19785865 - 19786057
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||  ||||||||||||||||| |||  |||||    
T  19785865 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaaagttag 19785963  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgt 253  Q
    | ||||||||||||||||| ||  |||| |||| ||| ||| || ||  |||| ||| ||||||| |||| |||| |||||||  ||||||||||||    
T  19785964 ggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgt 19786057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 57 - 253
Target Start/End: Complemental strand, 19878515 - 19878323
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  19878515 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 19878417  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgt 253  Q
    | ||||||||||||||||| ||  |||| |||| ||| ||| || ||  |||| ||| ||||||| |||| |||| |||||||  ||||||||||||    
T  19878416 ggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgt 19878323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 57 - 253
Target Start/End: Complemental strand, 19884291 - 19884099
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  19884291 aaaactaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 19884193  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgt 253  Q
    | ||||||||||||||||| ||  |||| |||| ||| ||| || ||  |||| ||| ||||||| |||| |||| |||||||  ||||||||||||    
T  19884192 ggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgt 19884099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 61 - 144
Target Start/End: Original strand, 34639986 - 34640069
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataa 144  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  34639986 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataa 34640069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 144
Target Start/End: Original strand, 34646660 - 34646743
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataa 144  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  || |||||||||||||    
T  34646660 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataa 34646743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 61 - 175
Target Start/End: Original strand, 25469704 - 25469816
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttaggatt 160  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  | ||||||||||||||  |||   ||||| ||    
T  25469704 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggtt 25469801  T
Q  161 tgatgatgattctga 175  Q
    ||||||| |||||||    
T  25469802 tgatgataattctga 25469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 24512843 - 24512899
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    ||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  24512843 ctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 9187550 - 9187498
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 114  Q
    |||||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 25348542 - 25348486
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    ||||||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  25348542 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 25397261 - 25397172
Alignment:
Q  30 agaatccggtcgttgtgcgttt--cttctaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||||||| |||||||||||||  ||||| ||  ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  25397261 agaatccgatcgttgtgcgtttttcttctgaat-taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 25598697 - 25598643
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    ||||||||||||||||| |||||||| |||||||| |||| ||||||||||||||    
T  25598697 aggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 31252478 - 31252413
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    ||||||||||||||||| ||||| | ||| || ||||| ||||||||||||||||| | |||||||    
T  31252478 ctaaggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattg 31252413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 19471335 - 19471391
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    ||||||||||||||| ||| ||||| || |||||||| ||||||||||| |||||||    
T  19471335 taaggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 2286769 - 2286823
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    ||||||||||||||||| |||||||| ||  |||| ||||| |||||||||||||    
T  2286769 aggtaagggtgagactaactctcaatgattgtaatatataacttctgaaaattga 2286823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 150
Target Start/End: Original strand, 11288668 - 11288758
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgag 150  Q
    |||||||||||||| || ||||| ||||| ||| |||| ||||||||||| |||||| ||||||  |  ||||| | ||||||||||||||    
T  11288668 ctaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattgag 11288758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 18659484 - 18659450
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcata 96  Q
    ||||||||||||||||||| |||||||||||||||    
T  18659484 taaggtaagggtgagactaactctcaataatcata 18659450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 24441707 - 24441673
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcata 96  Q
    ||||||||||||||||||| |||||||||||||||    
T  24441707 taaggtaagggtgagactaactctcaataatcata 24441673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 15458545 - 15458492
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 114  Q
    |||||||||||||| || ||||| ||||| || ||||| |||||||||||||||    
T  15458545 ctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15458492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 15465140 - 15465087
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 114  Q
    |||||||||||||| || ||||| ||||| || ||||| |||||||||||||||    
T  15465140 ctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 15465087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 89
Target Start/End: Original strand, 28288509 - 28288537
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaat 89  Q
    |||||||||||||||||||||||||||||    
T  28288509 ctaaggtaagggtgagactatctctcaat 28288537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 155; Significance: 3e-82; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 57 - 313
Target Start/End: Original strand, 1893 - 2148
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa-ttgacctaattgcttagttttggaaaataaattgagggtta 155  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| ||||||||||    
T  1893 aaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggtta 1992  T
Q  156 ggatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtga 255  Q
    || ||||||||||||| ||| ||  ||||||||||||| ||| |||||| |||||||| ||||||||| ||||||||||||||| |||||||||||||||    
T  1993 gggtttgatgatgattttgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatccttgttgttgctgtga 2090  T
Q  256 tcatacattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    |||||  |||||||||||| |||| |||||  || |||||||||||||||||| ||||    
T  2091 tcataacttgattgaaattgatgagtgattgtatgaattgatgaatttgtgtacgatg 2148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 57 - 313
Target Start/End: Original strand, 8570 - 8825
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa-ttgacctaattgcttagttttggaaaataaattgagggtta 155  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||| ||||||||||    
T  8570 aaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttgagggtta 8669  T
Q  156 ggatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtga 255  Q
    || ||||||||||||| ||| ||  ||||||||||||| ||| |||||| |||||||| ||||||||| ||||||||||||||| |||||||||||||||    
T  8670 gggtttgatgatgattatgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatccttgttgttgctgtga 8767  T
Q  256 tcatacattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    |||||  |||||||||||| || | |||||  || |||||||||||||||||| ||||    
T  8768 tcataacttgattgaaattgataagtgattgtatgaattgatgaatttgtgtacgatg 8825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 64 - 301
Target Start/End: Original strand, 14398 - 14635
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttaggatttg 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||| ||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 14497  T
Q  163 atgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataca 262  Q
    ||||||||||||||||||||||||||||||||||| ||||||  ||||||| | |||||| ||||||||||||||||| || |||||||||||||||| |    
T  14498 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttgctgtgatcataaa 14597  T
Q  263 ttgattgaaatttatgaatgattagatcaattgatgaat 301  Q
     |||||||||  ||||| ||||| ||| |||||||||||    
T  14598 ctgattgaaa-atatgattgattggataaattgatgaat 14635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 152; Significance: 2e-80; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 14 - 313
Target Start/End: Original strand, 20436974 - 20437274
Alignment:
Q  14 gaacaagtagagtcagagaatccggtcgttgtgcgtttcttcta--aaactaaggtaagggtgagactatctctcaataatcataatctataatttctga 111  Q
    |||||||| ||||||||||||||| | ||||||| ||| |||    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20436974 gaacaagtggagtcagagaatccgattgttgtgcttttgttcatctaaattaaggtaagggtgagactatctctcaataatcataatctataatttctga 20437073  T
Q  112 aaattgacctaattgcttag-ttttggaaaataaattgagggttaggatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgt 210  Q
    |||||||||||||||| ||| |||||||| ||||||||||||||||| |||||||||||||||| |||| |||||||| |||||||| |||||   ||||    
T  20437074 aaattgacctaattgcatagtttttggaagataaattgagggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattatgttgt 20437172  T
Q  211 aatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcatacattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatg 310  Q
    ||| |||||||||||||||||||||||||| |  ||||| |||||||||| ||||||||||| |||||| ||||| ||| ||||||||||  | ||||||    
T  20437173 aatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatg 20437271  T
Q  311 atg 313  Q
    |||    
T  20437272 atg 20437274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 41112094 - 41111977
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||| |||||||  |||  |||||    
T  41112094 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaaagttag 41111996  T
Q  157 gatttgatgatgattctga 175  Q
    | |||||||||||||||||    
T  41111995 ggtttgatgatgattctga 41111977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 32651682 - 32651563
Alignment:
Q  7 gtgagatgaacaagtagagtcagagaatccggtcgttgtgcgttt-cttctaaaactaaggtaagggtgagactatctctcaataatcataatctataat 105  Q
    |||||| |||||||| ||||||||||||||| |||||||| |||| ||||||||  ||||||||||||||||||||||||||||||||||| | ||||||    
T  32651682 gtgagaagaacaagtggagtcagagaatccgatcgttgtgtgttttcttctaaat-taaggtaagggtgagactatctctcaataatcatagtatataat 32651584  T
Q  106 ttctgaaaattgacctaattg 126  Q
    ||||||||||||| |||||||    
T  32651583 ttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 18712854 - 18712790
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 19663517 - 19663572
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 20805376 - 20805320
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  20805376 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 11158148 - 11158093
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||||||||||||||||    
T  11158148 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 10811785 - 10811839
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    ||||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  10811785 aggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 20851132 - 20851187
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20851132 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 20857759 - 20857814
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  20857759 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 21706331 - 21706276
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21706331 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 21710873 - 21710818
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  21710873 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 92
Target Start/End: Complemental strand, 24476380 - 24476350
Alignment:
Q  62 taaggtaagggtgagactatctctcaataat 92  Q
    |||||||||||||||||||||||||||||||    
T  24476380 taaggtaagggtgagactatctctcaataat 24476350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 92
Target Start/End: Original strand, 25091418 - 25091448
Alignment:
Q  62 taaggtaagggtgagactatctctcaataat 92  Q
    |||||||||||||||||||||||||||||||    
T  25091418 taaggtaagggtgagactatctctcaataat 25091448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 18271371 - 18271338
Alignment:
Q  63 aaggtaagggtgagactatctctcaataatcata 96  Q
    |||||||||||||||||| |||||||||||||||    
T  18271371 aaggtaagggtgagactaactctcaataatcata 18271338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 18276025 - 18275992
Alignment:
Q  63 aaggtaagggtgagactatctctcaataatcata 96  Q
    |||||||||||||||||| |||||||||||||||    
T  18276025 aaggtaagggtgagactaactctcaataatcata 18275992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 151; Significance: 7e-80; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 57 - 313
Target Start/End: Complemental strand, 23866674 - 23866418
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  23866674 aaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 23866576  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtga 255  Q
    | ||||||||||||| ||||| ||||||||||||||||||| ||||||   |||||||||||||||||||||  |||||||||| ||||||||||| |||    
T  23866575 ggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttgctctga 23866477  T
Q  256 tcatacattga-ttgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    || || | ||| ||| ||||||||| ||||| ||| |||||||||||||||||||||||    
T  23866476 tcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatg 23866418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 61 - 313
Target Start/End: Complemental strand, 44477678 - 44477428
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttaggatt 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  44477678 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44477579  T
Q  161 tgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata 260  Q
    ||||||||||| || |||| |||||||| |||||||| ||||||  ||||||  ||||||| |||||||||||||||||| |  ||||| ||||||||||    
T  44477578 tgatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 44477480  T
Q  261 cattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
     ||||||||||| |||||| ||||| ||| ||||||||||  | |||||||||    
T  44477479 aattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatg 44477428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 61 - 313
Target Start/End: Complemental strand, 44492836 - 44492586
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttaggatt 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  44492836 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44492737  T
Q  161 tgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata 260  Q
    ||||||||||| || |||| |||||||| |||||||| ||||||  ||||||  ||||||| |||||||||||||||||| |  ||||| ||||||||||    
T  44492736 tgatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 44492638  T
Q  261 cattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
     ||||||||||| |||||| ||||| ||| ||||||||||  | |||||||||    
T  44492637 aattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatg 44492586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 64 - 313
Target Start/End: Original strand, 8727735 - 8727984
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagtttt-ggaaaataaattgagggttaggatttg 162  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||| ||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 8727834  T
Q  163 atgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataca 262  Q
    | ||||||||||| ||| | |||||| |||||||| ||||||  ||||||| |||||||||||||||||||||||||| |  ||||| |||||||||| |    
T  8727835 acgatgattctgaggggta-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaa 8727933  T
Q  263 ttgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    |||||||||| |||||| ||||| ||| |||||||||||||||||||||||    
T  8727934 ttgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 8727984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 57 - 253
Target Start/End: Complemental strand, 17054650 - 17054458
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  17054650 aaaaccaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 17054552  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgt 253  Q
    | ||||||||||||||||| ||  |||| |||| ||| ||| || ||  |||| ||| ||||||| |||| |||| |||||||  ||||||||||||    
T  17054551 ggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgt 17054458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 18614382 - 18614271
Alignment:
Q  7 gtgagatgaacaagtagagtcagagaatccggtcgttgtgcgttt-cttctaaaactaaggtaagggtgagactatctctcaataatcataatctataat 105  Q
    |||||| |||||||||||||||||||||||| || |||||||||| ||||||||  |||||||||||||||||||||||||||||||||| || ||||||    
T  18614382 gtgagaagaacaagtagagtcagagaatccgatcattgtgcgttttcttctaaat-taaggtaagggtgagactatctctcaataatcatgatatataat 18614284  T
Q  106 ttctgaaaattga 118  Q
    |||||||||||||    
T  18614283 ttctgaaaattga 18614271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 153 - 313
Target Start/End: Original strand, 27940946 - 27941104
Alignment:
Q  153 ttaggatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctg 252  Q
    ||||| ||||||||||||||||| ||||| |||||| |||||||| ||||||  ||||||| |||||||||||||||||| ||||||| |  ||||| |     
T  27940946 ttagggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaatttaatctatactgttgtta 27941044  T
Q  253 tgatcatacattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    |||||||| ||||||||||| |||||| ||||| ||| ||||||||||  | |||||||||    
T  27941045 tgatcataaattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatg 27941104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 23482003 - 23482117
Alignment:
Q  14 gaacaagtagagtcagagaatccggtcgttgtgcgtttcttcta--aaactaaggtaagggtgagactatctctcaataatcataatctataatttctga 111  Q
    |||||| | ||||||||||||||| | ||||||| ||| |||    ||| ||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  23482003 gaacaactggagtcagagaatccgattgttgtgcttttgttcatctaaattaaggtaagggtgagactatctctcaataatcatagtatataatttctga 23482102  T
Q  112 aaattgacctaattg 126  Q
    ||||||| |||||||    
T  23482103 aaattgatctaattg 23482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 39364975 - 39364919
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    ||||||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  39364975 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 29643374 - 29643440
Alignment:
Q  49 tttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||  |||||||||||||||| ||||| |||||||||||||| | |||||||||||||||    
T  29643374 tttcttctaaat-taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 14056563 - 14056619
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  14056563 ctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 25112032 - 25111976
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||||||||||||||| ||| | | ||| ||||||||||||    
T  25112032 ctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 24320670 - 24320725
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  24320670 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 21931752 - 21931696
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    ||||||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  21931752 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 27940847 - 27940907
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||| ||| |  ||||| || ||||| ||| ||||||||||||||    
T  27940847 aaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg 27940907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 149; Significance: 1e-78; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 49 - 313
Target Start/End: Original strand, 19661442 - 19661703
Alignment:
Q  49 tttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattg 148  Q
    |||||||||||  |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  19661442 tttcttctaaat-taaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattg 19661540  T
Q  149 agggttaggatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgtt 248  Q
    ||||||||| |||||||||||||||| |||| |||||||| |||||||| ||||||  ||||||| ||||||| |||||||||||||||||| | |||||    
T  19661541 agggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgtt 19661639  T
Q  249 gctgtgatcatacattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    | |||||||||| ||||||||||| |||||| ||||| ||| ||||||||||  | |||||||||    
T  19661640 gttgtgatcataaattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatg 19661703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 62 - 313
Target Start/End: Complemental strand, 6483772 - 6483523
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttaggattt 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6483673  T
Q  162 gatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcatac 261  Q
    |||||||||| || |||| |||||||| |||||||| ||||||  ||||||  ||||||| |||||||||||||||||| |  ||||| ||||||||||     
T  6483672 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 6483574  T
Q  262 attgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    ||||||||||| |||||| ||||  ||| ||||||||||  | |||||||||    
T  6483573 attgattgaaa-ttatgattgatgggatgaattgatgaagatttgtatgatg 6483523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 62 - 313
Target Start/End: Complemental strand, 6487239 - 6486990
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttaggattt 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6487140  T
Q  162 gatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcatac 261  Q
    |||||||||| || |||| |||||||| |||||||| ||||||  ||||||  ||||||| |||||||||||||||||| |  ||||| ||||||||||     
T  6487139 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 6487041  T
Q  262 attgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    ||||||||||| |||||| ||||  ||| ||||||||||  | |||||||||    
T  6487040 attgattgaaa-ttatgattgatgggatgaattgatgaagatttgtatgatg 6486990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 57 - 258
Target Start/End: Complemental strand, 26583886 - 26583687
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  26583886 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgcatagttttggaaaataaattgagggttag 26583788  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgat 256  Q
    |  |||||||||||||||| |||||| |||||||||||||| ||| |   ||||||  | ||||||||||||||  | |||||| |  ||||||||||||    
T  26583787 ggcttgatgatgattctgaggggaaa-gggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgat 26583689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 64 - 313
Target Start/End: Original strand, 23089057 - 23089305
Alignment:
Q  64 aggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttaggatttg 162  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  ||||||||||||||| ||||    
T  23089057 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttg 23089156  T
Q  163 atgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataca 262  Q
    ||||||||||| ||||| ||||||||||||||||| |||||   ||||||| | | |||| |||||||| |||||||| |  |||||||||||||||| |    
T  23089157 atgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataaa 23089255  T
Q  263 ttgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    ||||||||||  ||| | ||||| ||| |||||||||| || |||||||||    
T  23089256 ttgattgaaa-atataattgattggatgaattgatgaagttctgtatgatg 23089305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 64 - 313
Target Start/End: Complemental strand, 23879060 - 23878813
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttaggatttga 163  Q
    |||||||||||||||||||||||| |||| || || |||||||||  ||||||||||||||||||||   |||   | |||||||||||||||| || |     
T  23879060 aggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttgaggattaaattgagggttagggtt-gt 23878962  T
Q  164 tgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcatacat 263  Q
    |||||||||||| |||||  |||||||||||||| |||||   ||||||| | ||||||||||||||| |||||||| |  ||||| |||||||||| ||    
T  23878961 tgatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgttgtgatcataaat 23878862  T
Q  264 tgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    |||||||||  ||  | ||||| ||| |||||||||| || |||||||||    
T  23878861 tgattgaaa-atagaattgattggatgaattgatgaagttttgtatgatg 23878813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 62 - 313
Target Start/End: Original strand, 23101463 - 23101713
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttaggatt 160  Q
    |||||||||||||||||||||||||| ||||  ||||| | ||||||| ||||||||||||||||| |||   |||   |  ||||||||||||||| ||    
T  23101463 taaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttgaggataaaattgagggttagggtt 23101562  T
Q  161 tgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcata 260  Q
    ||||||||||||||| ||||| ||||||||||||||| |||||   ||||||| | | |||| |||||||| |||||||| |  ||||| ||||||||||    
T  23101563 tgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgttgtgatcata 23101661  T
Q  261 cattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
     |||||||||||  ||| | ||||| ||| |||| ||||| || |||||||||    
T  23101662 aattgattgaaa-atataattgattggatgaattcatgaagttctgtatgatg 23101713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 61 - 175
Target Start/End: Original strand, 5706023 - 5706137
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttaggat 159  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||| |    
T  5706023 ctaaggtaagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 5706121  T
Q  160 ttgatgatgattctga 175  Q
    ||||||||||||||||    
T  5706122 ttgatgatgattctga 5706137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 23265197 - 23265133
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 23280265 - 23280201
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 123
Target Start/End: Complemental strand, 21908414 - 21908353
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaa 123  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 24661632 - 24661576
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  24661632 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 10632 - 10577
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  10632 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 25180929 - 25180984
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  25180929 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 26885237 - 26885183
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| ||||||||| |||| |||||||||||||||||    
T  26885237 ctaaggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaatt 26885183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 23168298 - 23168351
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 114  Q
    |||||||||||||| || ||||| ||| | |||||||| |||||||||||||||    
T  23168298 ctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaa 23168351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 23579555 - 23579608
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 114  Q
    |||||||||||||| || ||||| ||| | |||||||| |||||||||||||||    
T  23579555 ctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaa 23579608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 57 - 313
Target Start/End: Complemental strand, 11401 - 11146
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaata-aattgagggtta 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11401 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaatagaattgagggtta 11302  T
Q  156 ggatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtga 255  Q
    || |||||||||||||||| |||| |||| |||||||||||| ||||||  ||||||| | ||||||| ||||||| |||||||  |  |||||||||||    
T  11301 gggtttgatgatgattctggaggg-aatgagtaatgatcatgttaattctgttgtaatgtgatgttcaaaatgaaatcttaatccatactgttgctgtga 11203  T
Q  256 tcatacattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    ||| | |||||||||||  ||| | ||||| ||| |||||||||| || |||||||||    
T  11202 tcacaaattgattgaaa-atataattgattggatgaattgatgaagttttgtatgatg 11146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 61 - 313
Target Start/End: Original strand, 10195 - 10446
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttaggat 159  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||| |    
T  10195 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 10294  T
Q  160 ttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcat 259  Q
    ||||||||||||||| |||| |||||||| |||||||| ||||||  ||||||| ||||||| |||||||||||||||||| |  ||||| |||||||||    
T  10295 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 10393  T
Q  260 acattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    | ||||||||||| |||||| ||||| ||| ||||||||||  | |||||||||    
T  10394 aaattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatg 10446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 138; Significance: 4e-72; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 61 - 313
Target Start/End: Original strand, 1525 - 1776
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggttaggat 159  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||| |    
T  1525 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 1624  T
Q  160 ttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcat 259  Q
    ||||||||||||||| |||| |||||||| |||||||| ||||||  ||||||| ||||||| |||||||||||||||||| |  ||||| |||||||||    
T  1625 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 1723  T
Q  260 acattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    | ||||||||||| |||||| ||||| ||| ||||||||||  | |||||||||    
T  1724 aaattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatg 1776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 57 - 301
Target Start/End: Complemental strand, 350 - 109
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  350 aaaactaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgagggttag 252  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgat 256  Q
    | |||||||||||||||| |||| ||||||||||||||||| |||||  |||||| |||  |||||||| |||| ||||||||| |||| ||| ||||||    
T  251 ggtttgatgatgattctg-aggggaatgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaatctatgttattgatgtgat 153  T
Q  257 catacattgattgaaatttatgaatgattagatcaattgatgaat 301  Q
    |||| |||| |||||| |||||| || || ||| |||||||||||    
T  152 cataaattggttgaaa-ttatgattggttggataaattgatgaat 109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 131; Significance: 6e-68; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 57 - 313
Target Start/End: Complemental strand, 18229 - 17973
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttag-ttttggaaaataaattgagggtta 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  18229 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcttagctttaggaaaataaattgagggtta 18130  T
Q  156 ggatttgatgatgattctgaagggaaatgggtaatgatcatgataattc-ccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtg 254  Q
     | ||| ||||||||||| | ||||||| ||||||| ||||| ||||||   ||||||| | |||| |||||||||||||||| || |||||||||||||    
T  18129 aggtttaatgatgattctaacgggaaat-ggtaatggtcatgttaattctgtttgtaatgtgatgtccagaatgaaaacttaacctatgttgttgctgtg 18031  T
Q  255 atcatacattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    |||||  ||||||||||||||  || ||||| ||| ||||||||||| | |||||||||    
T  18030 atcatgaattgattgaaattt-ggattgattggataaattgatgaatatttgtatgatg 17973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 116; Significance: 6e-59; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 8184 - 8049
Alignment:
Q  9 gagatgaacaagtagagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctataatttc 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8184 gagaagaacaagtagagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttc 8085  T
Q  109 tgaaaattgacctaattgcttagttttggaaaataa 144  Q
    ||||||||||||||||||| |||| |||||| ||||    
T  8084 tgaaaattgacctaattgcatagtcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 1039 - 904
Alignment:
Q  9 gagatgaacaagtagagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctataatttc 108  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1039 gagaagaacaagtatagtcagagaatccggtcgttgtgcgtttcttctaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttc 940  T
Q  109 tgaaaattgacctaattgcttagttttggaaaataa 144  Q
    ||||||||||||||||||| |||| |||||| ||||    
T  939 tgaaaattgacctaattgcatagtcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 301
Target Start/End: Complemental strand, 899 - 806
Alignment:
Q  207 ttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcatacattgattgaaatttatgaatgattagatcaattgatgaat 301  Q
    ||||||| | |||||||||||||||||||||||| ||||||||||||||||||| |||||||| || ||||||  |||| ||| |||||||||||    
T  899 ttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattggaa-ttatgagggattggataaattgatgaat 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 207 - 301
Target Start/End: Complemental strand, 8044 - 7951
Alignment:
Q  207 ttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcatacattgattgaaatttatgaatgattagatcaattgatgaat 301  Q
    ||||||| | |||||||||||||||||||||||| ||||||||||||||||||| |||||||| || ||||||  |||| ||| |||||||||||    
T  8044 ttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattggaa-ttatgagggattggataaattgatgaat 7951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 57 - 181
Target Start/End: Complemental strand, 30917 - 30792
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaat-aaattgagggtta 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||| |||    
T  30917 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaggtaaaattgaggatta 30818  T
Q  156 ggatttgatgatgattctgaagggaa 181  Q
    || ||||||||||||| ||| |||||    
T  30817 gggtttgatgatgattttgaggggaa 30792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 64 - 313
Target Start/End: Original strand, 3295 - 3544
Alignment:
Q  64 aggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttaggatttg 162  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   ||||  |  ||||||||||||||| ||||    
T  3295 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggggataaaattgagggttagggtttg 3394  T
Q  163 atgatgattctgaagggaaatgggtaatga-tcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcatac 261  Q
    ||||||||||||| ||||| |||||||||| ||||| |||||   ||||||| | ||||||||||||||| |||||||| |  |||||||||||||| |     
T  3395 atgatgattctgaggggaa-tgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgctgtgatcacaa 3493  T
Q  262 attgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    |||||||||||  ||| | ||||| ||| |||||||||| || |||||||||    
T  3494 attgattgaaa-atataattgattggatgaattgatgaagttttgtatgatg 3544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 64 - 313
Target Start/End: Original strand, 3624 - 3872
Alignment:
Q  64 aggtaagggtgagactatctctcaataatc-ataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttaggatttg 162  Q
    |||||||||||||||||||||||| ||||  ||||| | ||||||| |||||||||||||||||||||   |||   |  ||||||||||||||| ||||    
T  3624 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttgaggataaaattgagggttagggtttg 3723  T
Q  163 atgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataca 262  Q
    ||||||||||||| ||| | ||||||||||||||| |||||   ||||||| | |||||| |||||||| |||||||| |  ||||| |||||||||| |    
T  3724 atgatgattctgaggggga-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatactgttgttgtgatcataaa 3822  T
Q  263 ttgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    ||||||||||  ||| | ||||| ||| |||||||||| || |||||||||    
T  3823 ttgattgaaa-atataattgattggatgaattgatgaagttttgtatgatg 3872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 57 - 252
Target Start/End: Original strand, 1728 - 1920
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  1728 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttag 1826  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctg 252  Q
    | ||||||||||||||||| ||  |||| |||| ||| ||| || ||  || | ||| ||||||| ||||||||| |||||||  || ||||||||    
T  1827 ggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttgctg 1920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 57 - 252
Target Start/End: Original strand, 5751 - 5943
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaattgagggttag 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||||  |||  |||||    
T  5751 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagttag 5849  T
Q  157 gatttgatgatgattctgaagggaaatgggtaatgatcatgataattcccttgtaatataatgttcagaatgaaaacttaatctttgttgttgctg 252  Q
    | ||||||||||||||||| ||  |||| |||| ||| ||| || ||  || | ||| ||||||| ||||||||| |||||||  || ||||||||    
T  5850 ggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttgctg 5943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 221 - 313
Target Start/End: Complemental strand, 3558 - 3466
Alignment:
Q  221 tcagaatgaaaacttaatctttgttgttgctgtgatcatacattgattgaaatttatgaatgattagatcaattgatgaatttgtgtatgatg 313  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||||| ||| |||||||||||||||||||||||    
T  3558 tcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaatttatgggtgattggatgaattgatgaatttgtgtatgatg 3466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 126
Target Start/End: Complemental strand, 116998 - 116887
Alignment:
Q  15 aacaagtagagtcagagaatccggtcgttgtgcgttt-cttctaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 113  Q
    ||||||| ||||||||||||||| |||||||| |||| ||||||||  ||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  116998 aacaagtggagtcagagaatccgatcgttgtgtgttttcttctaaat-taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaa 116900  T
Q  114 attgacctaattg 126  Q
    ||||| |||||||    
T  116899 attgatctaattg 116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 60474 - 60441
Alignment:
Q  63 aaggtaagggtgagactatctctcaataatcata 96  Q
    |||||||||||||||||| |||||||||||||||    
T  60474 aaggtaagggtgagactaactctcaataatcata 60441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 173
Target Start/End: Original strand, 45274 - 45386
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcttagttttggaaaataaat-tgagggttaggat 159  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||||| |||||  ||| |||   ||||| |    
T  45274 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 45372  T
Q  160 ttgatgatgattct 173  Q
    ||||||||||||||    
T  45373 ttgatgatgattct 45386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 16875 - 16811
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 8 - 72
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 17699 - 17643
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  17699 ctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 13687 - 13623
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||||||||||||| |||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 40531 - 40587
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  40531 ctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 101928 - 101992
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||| |||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 135529 - 135473
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  135529 ctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 117
Target Start/End: Original strand, 14944 - 15052
Alignment:
Q  9 gagatgaacaagtagagtca-gagaatccggtcgttgtgcgttt-cttctaaaactaaggtaagggtgagactatctctcaataatcataatctataatt 106  Q
    |||| |||||||||||| || | ||||||| ||||||||||||| |||||||   ||||||||||||||||||| |||||||| ||| |||| |||||||    
T  14944 gagaagaacaagtagagccaagggaatccgatcgttgtgcgttttcttctaat--taaggtaagggtgagactaactctcaatgatcttaatatataatt 15041  T
Q  107 tctgaaaattg 117  Q
    |||||||||||    
T  15042 tctgaaaattg 15052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 22594 - 22646
Alignment:
Q  63 aaggtaagggtgagactatctctcaataatcataatctataatttctgaaaat 115  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  22594 aaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 34276 - 34331
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattg 117  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 35438 - 35495
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    ||||||||||||| |||||| |||||||| ||  |||| ||||| |||||||||||||    
T  35438 ctaaggtaagggtaagactaactctcaatgattgtaatgtataacttctgaaaattga 35495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 12352 - 12296
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  12352 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 125
Target Start/End: Complemental strand, 1441 - 1378
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaatt 125  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||| |||||||||| ||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaatt 1378  T

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Target: scaffold0815 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 1509 - 1453
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa 113  Q
    |||| ||||||||||||||||||| |||||||| ||| |||| ||||||||||||||    
T  1509 aaaattaaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

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Target: scaffold0096 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 39503 - 39563
Alignment:
Q  58 aaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    |||| |||||||||||||| ||| |||||||| |||||||| ||||||||| |||||||||    
T  39503 aaacaaaggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

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Target: scaffold0348 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 9391 - 9336
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  9391 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

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Target: scaffold0127 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 10294 - 10239
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    ||||||||||||||||| |||||  ||||||||||||| | |||||||||||||||    
T  10294 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

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Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 69855 - 69749
Alignment:
Q  9 gagatgaacaagtagagtca-gagaatccggtcgttgtgcgttt-cttctaaaactaaggtaagggtgagactatctctcaataatcataatctataatt 106  Q
    |||| |||||||||||| || |||||| || |||||| |||||| ||||||||  ||||||||||||||||||| || ||||| ||| |||| |||||||    
T  69855 gagaagaacaagtagagccaagagaattcgatcgttgcgcgttttcttctaaat-taaggtaagggtgagactaactttcaatgatcttaatatataatt 69757  T
Q  107 tctgaaaa 114  Q
    | ||||||    
T  69756 tatgaaaa 69749  T

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Target: scaffold0023 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 135493 - 135438
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||| |||||| ||||| |||||| ||||||| |||||||||||||||||    
T  135493 ctaaggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

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Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 493028 - 493082
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    ||||||||||||||||| ||||| ||||||||| |||| |||||||||||||||||    
T  493028 ctaaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaatt 493082  T

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Target: scaffold2054 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 150
Target Start/End: Complemental strand, 774 - 680
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaaattgacctaattgcttagttttggaaaataaattgag 150  Q
    |||||||||||||||||| || ||||| ||||| ||| |||| ||||||||||| |||||| ||||||  |  ||||| | ||||||||||||||    
T  774 aaaactaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattgag 680  T

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Target: scaffold1318 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 1913 - 1967
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    ||||||||||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  1913 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

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Target: scaffold0610 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 6609 - 6540
Alignment:
Q  7 gtgagatgaacaagtagagtcagagaatccggtcgttgtgcg-tttcttctaaaactaaggtaagggtgag 76  Q
    |||||| |||||||||||| |||||||| || |||||||||| |||||||| ||| |||||||||||||||    
T  6609 gtgagaagaacaagtagagccagagaattcgatcgttgtgcgttttcttct-aaattaaggtaagggtgag 6540  T

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Target: scaffold0609 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 5857 - 5922
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattg 126  Q
    |||||||||||||| || ||||| ||||| || ||||| ||||||||||||||||| | |||||||    
T  5857 ctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattg 5922  T

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Target: scaffold0335 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 2628 - 2684
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    ||||||||||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  2628 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

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Target: scaffold0261 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 23569 - 23624
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| | ||| |||||||| |||||||||||||||||    
T  23569 ctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaatt 23624  T

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Target: scaffold0053 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 79490 - 79545
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| | |||||||||||||||    
T  79490 ctaaggtaagggtgggattatctttcaatagtcataatatgtaatttctgaaaatt 79545  T

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Target: scaffold0053; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 79057 - 79125
Alignment:
Q  28 agagaatccggtcgttgtgcgttt--cttctaaaactaaggtaagggtgagactatctctcaataatcat 95  Q
    |||||||||| |||||||||||||  ||||||||  ||||||||||||||| ||| |||||||| |||||    
T  79057 agagaatccgatcgttgtgcgtttttcttctaaat-taaggtaagggtgaggctaactctcaatgatcat 79125  T

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Target: scaffold0790 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 90
Target Start/End: Complemental strand, 5513 - 5480
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaata 90  Q
    ||||||||||||||||||||||||||| ||||||    
T  5513 aaaactaaggtaagggtgagactatctttcaata 5480  T

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Target: scaffold0481 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 676 - 721
Alignment:
Q  63 aaggtaagggtgagactatctctcaataatcataatctataatttc 108  Q
    |||||||||||||||||| |||||||| ||| |||| |||||||||    
T  676 aaggtaagggtgagactaactctcaatgatcttaatgtataatttc 721  T

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Target: scaffold0249 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 13894 - 13947
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaa 114  Q
    |||||||||||||| || ||||| ||||| || ||||| |||||||||||||||    
T  13894 ctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaa 13947  T

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Target: scaffold0600 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 788 - 732
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    ||||||| ||||||| ||| |||||||| || ||||| ||||| |||||||||||||    
T  788 taaggtaggggtgaggctaactctcaatgattataatatataacttctgaaaattga 732  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 11681 - 11630
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataa--tctataatttctga 111  Q
    ||||||||||||||||||| ||||||||||| ||||  | ||||||||||||    
T  11681 taaggtaagggtgagactaactctcaataattataaattatataatttctga 11630  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 73337 - 73285
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaatt 116  Q
    ||||||||||| || ||||| ||||| |||||||| |||||||| ||||||||    
T  73337 aggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaatt 73285  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 121958 - 121902
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    ||||||||||||||| ||| |||||||| || ||||| |||||  ||||||||||||    
T  121958 taaggtaagggtgaggctaactctcaatgattataatatataaaatctgaaaattga 121902  T

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Target: scaffold0031; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 132834 - 132778
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattga 118  Q
    ||||||||||||||| ||| |||||||| || ||||| |||||  ||||||||||||    
T  132834 taaggtaagggtgaggctaactctcaatgattataatatataaaatctgaaaattga 132778  T

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