View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20654_high_34 (Length: 250)
Name: NF20654_high_34
Description: NF20654
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20654_high_34 |
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Alignment Details
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 12306060 - 12306301
Alignment:
| Q |
1 |
taagcaagcaatccaaaagtgaccaaaatatgtattcacatcctttgtcagatatgtttcagagagctgaagcaaatggatatgaaccttatcgcgagct |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
12306060 |
taagcaagcaatccaaaagtgaccaaaatatgtattcacatcctttgtcagatatgtttcagagagctgaagcaaatggatatgaaccttattgcgagct |
12306159 |
T |
|
| Q |
101 |
taaacttgattctatgattgaattttatacaactccaggactgtcaacaaataatccagagtgtggtacacaaaatcaatttgttttggggcattgctca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12306160 |
taaacttgattctatgattgaattttatacaactccaggactgtcaacaaataatccagagtgtggtacacaaaatcaatttgttttggggcattgctca |
12306259 |
T |
|
| Q |
201 |
gaaattcctaaaccagaagtgtccgacgtttccttctctgct |
242 |
Q |
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||||||||||||||||||||||||||||||||||| |||||| |
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| T |
12306260 |
gaaattcctaaaccagaagtgtccgacgtttccttttctgct |
12306301 |
T |
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