View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20656_high_10 (Length: 350)
Name: NF20656_high_10
Description: NF20656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20656_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 19 - 334
Target Start/End: Original strand, 29047263 - 29047578
Alignment:
| Q |
19 |
gctgttgtattacactatcctcttgaaaagaaaggcattttttcgcgcacgaaaggtgaacttggtttgaaggtattcattacaaataatccttctttaa |
118 |
Q |
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| T |
29047263 |
gctgttgtattacactatcctcttgaaaagaaaggcattttttcgcgcacgaaaggtgaacttggtttgaaggtattcattacaaataatccttctttaa |
29047362 |
T |
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| Q |
119 |
gagcctcaaaccctcttcctgctatgcaagaaccctacgtcaacaatggattcatgaataccgatcaaaaccttgcacaagatcaaataccggtaccggc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29047363 |
gagcctcaaaccctcttcctgctatgcaagaacccttcgtcaacaatggattcatgaataccgatcaaaaccttgcacaagatcaaataccggtaccggc |
29047462 |
T |
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| Q |
219 |
atcatttacaaatcaaatcctcaacaatgtgttgaaaaagaaaaatgagtcaaggcacacatttcacaaccttcctaaatcaaatgatggaaaggaaaag |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29047463 |
atcatttacaaatcaaatcctcaacaatgtgttgaaaaagaaaaatgagtcaaggcacacatttcacaaccttcctaaatcaaatgatggaaaggaaaag |
29047562 |
T |
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| Q |
319 |
aaatcaaatgtaacag |
334 |
Q |
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|||||||||||||||| |
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| T |
29047563 |
aaatcaaatgtaacag |
29047578 |
T |
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