View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20656_low_14 (Length: 301)

Name: NF20656_low_14
Description: NF20656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20656_low_14
NF20656_low_14
[»] chr5 (66 HSPs)
chr5 (1-239)||(17069218-17069461)
chr5 (85-239)||(36156074-36156228)
chr5 (87-239)||(10400722-10400874)
chr5 (88-239)||(2270806-2270957)
chr5 (85-239)||(24431819-24431973)
chr5 (69-194)||(1445729-1445854)
chr5 (85-239)||(13645539-13645693)
chr5 (119-239)||(40584916-40585036)
chr5 (120-239)||(39041360-39041479)
chr5 (119-238)||(43059538-43059657)
chr5 (105-239)||(10568520-10568653)
chr5 (113-235)||(32455533-32455655)
chr5 (66-235)||(13091148-13091319)
chr5 (93-239)||(13119032-13119178)
chr5 (98-235)||(29744139-29744276)
chr5 (89-206)||(31588501-31588617)
chr5 (89-235)||(9589444-9589591)
chr5 (104-239)||(23258567-23258704)
chr5 (67-231)||(40563116-40563281)
chr5 (67-231)||(39816506-39816670)
chr5 (89-235)||(14967466-14967614)
chr5 (89-187)||(2011079-2011175)
chr5 (89-187)||(16602384-16602480)
chr5 (120-228)||(13588919-13589027)
chr5 (100-239)||(34259772-34259912)
chr5 (96-231)||(18002682-18002816)
chr5 (120-235)||(28770001-28770116)
chr5 (89-149)||(39979667-39979726)
chr5 (98-235)||(8068351-8068489)
chr5 (88-167)||(9499708-9499785)
chr5 (88-187)||(10118266-10118363)
chr5 (88-163)||(13956605-13956679)
chr5 (93-235)||(27980011-27980153)
chr5 (124-187)||(32624461-32624524)
chr5 (120-187)||(37963049-37963116)
chr5 (88-178)||(38354754-38354843)
chr5 (252-285)||(17069164-17069197)
chr5 (120-235)||(10688630-10688745)
chr5 (88-235)||(13544114-13544261)
chr5 (120-235)||(25684300-25684415)
chr5 (120-235)||(31236643-31236758)
chr5 (120-235)||(39540774-39540889)
chr5 (93-239)||(42486632-42486778)
chr5 (92-187)||(29665847-29665940)
chr5 (200-235)||(38354847-38354882)
chr5 (89-167)||(12336521-12336597)
chr5 (89-167)||(13593305-13593381)
chr5 (252-285)||(2270978-2271011)
chr5 (66-206)||(22780778-22780919)
chr5 (100-235)||(29996732-29996867)
chr5 (252-285)||(32455473-32455506)
chr5 (252-285)||(36156020-36156053)
chr5 (64-145)||(40803648-40803729)
chr5 (171-235)||(41631455-41631519)
chr5 (252-285)||(43059679-43059712)
chr5 (120-235)||(3882068-3882183)
chr5 (142-190)||(4839522-4839570)
chr5 (172-235)||(15264279-15264343)
chr5 (98-233)||(19126152-19126287)
chr5 (120-235)||(23189122-23189237)
chr5 (252-284)||(23258722-23258754)
chr5 (120-235)||(32063580-32063695)
chr5 (120-235)||(34859489-34859604)
chr5 (253-285)||(39041500-39041532)
chr5 (160-235)||(43167179-43167254)
chr5 (120-235)||(43411572-43411686)
[»] chr6 (40 HSPs)
chr6 (66-239)||(29023619-29023792)
chr6 (65-239)||(31644409-31644583)
chr6 (67-235)||(6093888-6094056)
chr6 (66-239)||(21970540-21970713)
chr6 (68-239)||(18667689-18667863)
chr6 (63-189)||(4979097-4979222)
chr6 (88-231)||(10887832-10887974)
chr6 (88-187)||(21998900-21998997)
chr6 (89-235)||(24081169-24081315)
chr6 (89-235)||(1339611-1339755)
chr6 (89-187)||(229835-229931)
chr6 (66-239)||(4509663-4509835)
chr6 (120-228)||(9226445-9226553)
chr6 (202-239)||(12782880-12782917)
chr6 (120-228)||(34315179-34315287)
chr6 (88-231)||(7344344-7344486)
chr6 (89-187)||(6295665-6295760)
chr6 (89-187)||(6302475-6302570)
chr6 (120-235)||(1339091-1339206)
chr6 (88-164)||(1705914-1705989)
chr6 (88-235)||(2198019-2198166)
chr6 (93-145)||(11763200-11763252)
chr6 (120-235)||(18871160-18871275)
chr6 (118-166)||(27109058-27109106)
chr6 (118-166)||(27150855-27150903)
chr6 (120-235)||(33954688-33954804)
chr6 (88-187)||(926829-926926)
chr6 (114-239)||(9687008-9687134)
chr6 (130-228)||(27719069-27719167)
chr6 (66-145)||(33574680-33574759)
chr6 (66-145)||(33574858-33574937)
chr6 (89-167)||(11273408-11273484)
chr6 (89-167)||(16893203-16893280)
chr6 (252-285)||(12782825-12782858)
chr6 (99-239)||(14779136-14779276)
chr6 (252-285)||(29023811-29023844)
chr6 (252-285)||(31644604-31644637)
chr6 (107-167)||(3953943-3954002)
chr6 (88-164)||(21294098-21294173)
chr6 (120-235)||(35224884-35224999)
[»] chr1 (97 HSPs)
chr1 (68-238)||(30547844-30548014)
chr1 (61-239)||(34100708-34100886)
chr1 (66-239)||(51610536-51610711)
chr1 (85-239)||(25081777-25081931)
chr1 (66-239)||(24511821-24511985)
chr1 (85-187)||(42958860-42958962)
chr1 (85-239)||(48796262-48796416)
chr1 (120-235)||(24245536-24245651)
chr1 (66-239)||(12178831-12179005)
chr1 (88-231)||(17525678-17525821)
chr1 (66-233)||(32144669-32144836)
chr1 (88-235)||(45809682-45809829)
chr1 (88-235)||(46707366-46707513)
chr1 (88-235)||(44382039-44382185)
chr1 (126-179)||(52365643-52365696)
chr1 (66-239)||(38261036-38261209)
chr1 (66-235)||(50239277-50239447)
chr1 (66-231)||(25702435-25702601)
chr1 (68-166)||(34038163-34038262)
chr1 (66-145)||(35873936-35874015)
chr1 (89-167)||(41541501-41541579)
chr1 (88-189)||(24677576-24677675)
chr1 (88-239)||(21883041-21883196)
chr1 (185-239)||(31401588-31401642)
chr1 (93-166)||(42275362-42275436)
chr1 (89-235)||(17644414-17644559)
chr1 (94-187)||(46918669-46918760)
chr1 (120-228)||(48481093-48481201)
chr1 (68-239)||(52180465-52180637)
chr1 (88-187)||(17203034-17203130)
chr1 (86-190)||(23304690-23304793)
chr1 (60-187)||(49982450-49982577)
chr1 (105-239)||(52441116-52441251)
chr1 (98-235)||(9222886-9223024)
chr1 (66-235)||(9587880-9588050)
chr1 (66-239)||(12105160-12105334)
chr1 (89-235)||(32912235-32912380)
chr1 (66-231)||(52345599-52345765)
chr1 (120-190)||(18992632-18992702)
chr1 (120-233)||(29171404-29171517)
chr1 (89-187)||(34410974-34411070)
chr1 (66-235)||(35910399-35910569)
chr1 (89-187)||(39084734-39084830)
chr1 (89-187)||(47458814-47458910)
chr1 (120-233)||(50502399-50502512)
chr1 (60-235)||(20487564-20487737)
chr1 (118-187)||(38862447-38862515)
chr1 (60-145)||(46641844-46641929)
chr1 (120-235)||(3150240-3150355)
chr1 (98-166)||(7122261-7122329)
chr1 (120-235)||(9259871-9259986)
chr1 (120-235)||(17376592-17376707)
chr1 (124-235)||(33771705-33771816)
chr1 (120-235)||(37765308-37765423)
chr1 (120-235)||(41321242-41321357)
chr1 (120-235)||(43224700-43224815)
chr1 (89-235)||(51004814-51004960)
chr1 (69-145)||(51056523-51056599)
chr1 (101-235)||(632683-632818)
chr1 (66-239)||(24230569-24230743)
chr1 (119-190)||(29953725-29953796)
chr1 (124-187)||(33234113-33234176)
chr1 (89-164)||(40054896-40054970)
chr1 (88-187)||(40868157-40868254)
chr1 (89-231)||(41568685-41568826)
chr1 (208-239)||(42958966-42958997)
chr1 (124-187)||(49739415-49739478)
chr1 (120-225)||(1658604-1658709)
chr1 (89-167)||(5957280-5957356)
chr1 (89-187)||(35533897-35533993)
chr1 (89-187)||(51873298-51873394)
chr1 (88-239)||(6329270-6329422)
chr1 (120-228)||(22821492-22821600)
chr1 (126-179)||(29852249-29852302)
chr1 (252-285)||(32144862-32144895)
chr1 (118-167)||(33986178-33986226)
chr1 (252-285)||(34100907-34100940)
chr1 (252-285)||(45809621-45809654)
chr1 (110-187)||(46283059-46283135)
chr1 (252-285)||(48796208-48796241)
chr1 (252-285)||(51610732-51610765)
chr1 (67-235)||(51977859-51978027)
chr1 (120-235)||(10061394-10061509)
chr1 (88-235)||(11444293-11444440)
chr1 (120-235)||(24247857-24247972)
chr1 (253-285)||(25081952-25081984)
chr1 (120-235)||(27038780-27038895)
chr1 (120-235)||(31571026-31571141)
chr1 (120-235)||(33828919-33829034)
chr1 (120-235)||(33838932-33839047)
chr1 (88-235)||(42647633-42647780)
chr1 (93-145)||(44263984-44264036)
chr1 (93-145)||(48976902-48976954)
chr1 (120-235)||(49289284-49289399)
chr1 (114-166)||(51184345-51184397)
chr1 (152-235)||(52261049-52261133)
chr1 (93-145)||(52861324-52861376)
[»] chr7 (55 HSPs)
chr7 (66-239)||(43631055-43631228)
chr7 (85-239)||(16086965-16087119)
chr7 (85-235)||(41742813-41742963)
chr7 (85-235)||(29682276-29682426)
chr7 (60-237)||(23561340-23561523)
chr7 (126-239)||(17020262-17020375)
chr7 (66-239)||(2291013-2291186)
chr7 (63-239)||(15584538-15584714)
chr7 (66-235)||(15591622-15591791)
chr7 (88-231)||(47258702-47258845)
chr7 (66-227)||(30936094-30936256)
chr7 (132-239)||(30878549-30878646)
chr7 (89-187)||(22904516-22904612)
chr7 (86-235)||(42975131-42975281)
chr7 (88-239)||(22967431-22967586)
chr7 (88-167)||(8577947-8578025)
chr7 (89-235)||(8770393-8770539)
chr7 (89-235)||(45857498-45857644)
chr7 (89-187)||(2932600-2932696)
chr7 (89-187)||(3228530-3228626)
chr7 (98-239)||(44963855-44963996)
chr7 (88-231)||(1343262-1343404)
chr7 (120-235)||(15090905-15091020)
chr7 (93-239)||(23406679-23406826)
chr7 (120-235)||(42039539-42039654)
chr7 (98-235)||(24505360-24505498)
chr7 (66-164)||(26605056-26605155)
chr7 (89-235)||(31743539-31743684)
chr7 (67-239)||(35291327-35291500)
chr7 (89-187)||(42584047-42584144)
chr7 (120-228)||(2038150-2038258)
chr7 (112-239)||(3214752-3214881)
chr7 (115-235)||(37118383-37118503)
chr7 (88-235)||(427860-428007)
chr7 (120-235)||(39444202-39444317)
chr7 (91-187)||(40331084-40331178)
chr7 (114-190)||(41809481-41809557)
chr7 (120-235)||(47220192-47220307)
chr7 (89-187)||(22639391-22639486)
chr7 (88-187)||(24149053-24149150)
chr7 (114-235)||(32529228-32529350)
chr7 (88-187)||(45701054-45701151)
chr7 (112-167)||(46911590-46911644)
chr7 (88-206)||(15877340-15877458)
chr7 (88-138)||(24204637-24204687)
chr7 (89-179)||(27897248-27897336)
chr7 (89-167)||(31311648-31311725)
chr7 (252-285)||(16087140-16087173)
chr7 (88-145)||(19345939-19345995)
chr7 (98-167)||(35395111-35395179)
chr7 (136-235)||(3062130-3062229)
chr7 (120-235)||(9923307-9923422)
chr7 (112-164)||(16200429-16200480)
chr7 (132-235)||(40379038-40379140)
chr7 (66-167)||(46575101-46575204)
[»] chr4 (80 HSPs)
chr4 (66-238)||(30060530-30060702)
chr4 (71-238)||(33491606-33491773)
chr4 (69-239)||(408296-408466)
chr4 (66-239)||(46663559-46663732)
chr4 (85-239)||(51944661-51944815)
chr4 (66-239)||(37748660-37748833)
chr4 (115-238)||(27736637-27736760)
chr4 (66-239)||(42881040-42881213)
chr4 (68-235)||(43958996-43959163)
chr4 (66-191)||(50189294-50189419)
chr4 (88-235)||(34594993-34595139)
chr4 (66-235)||(11038046-11038215)
chr4 (88-235)||(28967769-28967916)
chr4 (66-235)||(46548991-46549159)
chr4 (68-227)||(31908686-31908846)
chr4 (66-235)||(9356381-9356552)
chr4 (88-235)||(1433829-1433976)
chr4 (186-237)||(50187732-50187783)
chr4 (89-167)||(32570673-32570750)
chr4 (87-235)||(36091293-36091443)
chr4 (63-239)||(38008386-38008563)
chr4 (93-239)||(5970726-5970873)
chr4 (89-189)||(39412193-39412292)
chr4 (91-167)||(48262867-48262942)
chr4 (88-235)||(56272815-56272962)
chr4 (88-187)||(19627873-19627971)
chr4 (66-239)||(50776004-50776178)
chr4 (88-206)||(34936577-34936695)
chr4 (89-187)||(54178706-54178802)
chr4 (66-166)||(32288903-32289004)
chr4 (120-228)||(42680653-42680761)
chr4 (120-235)||(16004588-16004703)
chr4 (120-235)||(46222047-46222162)
chr4 (93-164)||(22077674-22077744)
chr4 (88-187)||(25684116-25684213)
chr4 (66-239)||(33491162-33491335)
chr4 (62-239)||(36631032-36631209)
chr4 (98-235)||(38955074-38955212)
chr4 (105-164)||(43363636-43363695)
chr4 (65-235)||(47302632-47302803)
chr4 (89-187)||(5474029-5474125)
chr4 (89-167)||(25607714-25607791)
chr4 (89-187)||(48207364-48207460)
chr4 (89-167)||(52323990-52324067)
chr4 (110-187)||(6882575-6882651)
chr4 (89-190)||(9858531-9858632)
chr4 (110-187)||(32882545-32882621)
chr4 (88-239)||(56303070-56303222)
chr4 (120-235)||(10779046-10779161)
chr4 (120-235)||(46630700-46630815)
chr4 (98-166)||(51282241-51282309)
chr4 (93-164)||(21424450-21424520)
chr4 (89-164)||(39953609-39953683)
chr4 (66-239)||(42177342-42177516)
chr4 (89-164)||(43349090-43349164)
chr4 (66-167)||(126882-126984)
chr4 (89-163)||(595320-595393)
chr4 (98-140)||(5340301-5340343)
chr4 (89-167)||(6807010-6807087)
chr4 (89-187)||(17281798-17281894)
chr4 (89-187)||(17370300-17370396)
chr4 (118-231)||(17616459-17616572)
chr4 (89-167)||(30168122-30168199)
chr4 (92-189)||(1791854-1791949)
chr4 (252-285)||(11038243-11038276)
chr4 (252-285)||(33491795-33491828)
chr4 (120-228)||(33612767-33612875)
chr4 (115-231)||(36188135-36188251)
chr4 (124-228)||(54505633-54505738)
chr4 (89-231)||(3690753-3690895)
chr4 (88-231)||(9579687-9579829)
chr4 (88-231)||(9585382-9585524)
chr4 (120-235)||(23639291-23639405)
chr4 (66-130)||(29582308-29582372)
chr4 (66-157)||(30348163-30348255)
chr4 (120-235)||(36569885-36570000)
chr4 (120-235)||(42244592-42244707)
chr4 (253-285)||(50187677-50187709)
chr4 (88-231)||(52940722-52940864)
chr4 (120-227)||(54499819-54499926)
[»] chr8 (50 HSPs)
chr8 (66-239)||(36672010-36672183)
chr8 (85-237)||(6631348-6631500)
chr8 (66-235)||(17792441-17792610)
chr8 (88-235)||(27172151-27172298)
chr8 (88-238)||(36274586-36274736)
chr8 (66-239)||(31158787-31158960)
chr8 (85-239)||(24377544-24377689)
chr8 (104-235)||(24937623-24937754)
chr8 (66-235)||(17642308-17642479)
chr8 (88-235)||(43460587-43460734)
chr8 (88-231)||(30777295-30777437)
chr8 (89-235)||(2273245-2273392)
chr8 (89-231)||(5215346-5215487)
chr8 (98-239)||(29454175-29454317)
chr8 (88-235)||(32718977-32719124)
chr8 (109-187)||(11360212-11360289)
chr8 (89-187)||(36569685-36569781)
chr8 (89-187)||(44636945-44637041)
chr8 (92-189)||(5982211-5982306)
chr8 (60-167)||(2261318-2261426)
chr8 (93-231)||(29265616-29265755)
chr8 (119-203)||(32238205-32238288)
chr8 (93-167)||(40776664-40776739)
chr8 (132-206)||(12980279-12980353)
chr8 (98-164)||(34047449-34047514)
chr8 (120-228)||(12266126-12266234)
chr8 (120-235)||(7223720-7223835)
chr8 (120-235)||(14913899-14914014)
chr8 (120-235)||(27100866-27100981)
chr8 (88-227)||(27970257-27970394)
chr8 (120-235)||(36835579-36835694)
chr8 (120-235)||(38971701-38971816)
chr8 (120-235)||(39002799-39002914)
chr8 (93-231)||(39300110-39300249)
chr8 (66-239)||(1043292-1043466)
chr8 (124-187)||(3053084-3053147)
chr8 (120-187)||(18844214-18844281)
chr8 (88-187)||(37218887-37218985)
chr8 (114-239)||(43841891-43842016)
chr8 (88-186)||(12107507-12107604)
chr8 (89-187)||(40154717-40154813)
chr8 (115-231)||(2164994-2165110)
chr8 (252-285)||(24937781-24937814)
chr8 (252-285)||(27172092-27172125)
chr8 (253-285)||(6630875-6630907)
chr8 (88-164)||(6804031-6804106)
chr8 (89-129)||(9712479-9712519)
chr8 (136-235)||(28896974-28897073)
chr8 (132-235)||(29039680-29039783)
chr8 (93-239)||(44000588-44000735)
[»] chr3 (67 HSPs)
chr3 (64-239)||(52024436-52024611)
chr3 (85-239)||(19914267-19914421)
chr3 (66-239)||(9252089-9252259)
chr3 (66-239)||(35748922-35749095)
chr3 (66-239)||(29806242-29806415)
chr3 (87-239)||(8433660-8433811)
chr3 (66-239)||(45635681-45635854)
chr3 (85-239)||(52162615-52162770)
chr3 (98-239)||(23796010-23796151)
chr3 (66-226)||(8966177-8966337)
chr3 (98-239)||(54262576-54262717)
chr3 (66-239)||(5528927-5529100)
chr3 (98-235)||(50029783-50029921)
chr3 (66-239)||(1129129-1129303)
chr3 (88-239)||(26456975-26457128)
chr3 (89-186)||(45602047-45602144)
chr3 (89-189)||(29384966-29385065)
chr3 (120-235)||(50465709-50465824)
chr3 (120-187)||(882009-882076)
chr3 (93-239)||(4817103-4817250)
chr3 (89-187)||(20199634-20199730)
chr3 (89-187)||(24397670-24397766)
chr3 (120-228)||(7157093-7157201)
chr3 (88-235)||(19608527-19608675)
chr3 (61-145)||(25834557-25834641)
chr3 (120-235)||(33830767-33830882)
chr3 (89-235)||(42622848-42622992)
chr3 (120-235)||(45927457-45927572)
chr3 (66-145)||(40478085-40478164)
chr3 (66-239)||(42621848-42622022)
chr3 (89-167)||(25480322-25480399)
chr3 (93-166)||(39678412-39678486)
chr3 (68-190)||(52082045-52082167)
chr3 (90-167)||(15804567-15804644)
chr3 (99-163)||(29491932-29491997)
chr3 (120-235)||(32720222-32720338)
chr3 (120-235)||(35320415-35320530)
chr3 (93-239)||(35389318-35389465)
chr3 (88-223)||(42657835-42657971)
chr3 (120-235)||(51235758-51235873)
chr3 (88-204)||(52038348-52038464)
chr3 (88-235)||(52178975-52179123)
chr3 (93-167)||(7862749-7862824)
chr3 (120-167)||(26409685-26409732)
chr3 (98-239)||(39252922-39253064)
chr3 (66-137)||(44379414-44379485)
chr3 (93-239)||(50412098-50412244)
chr3 (98-239)||(51344605-51344746)
chr3 (89-187)||(4521293-4521389)
chr3 (89-187)||(29815414-29815511)
chr3 (89-167)||(35375535-35375613)
chr3 (89-167)||(51996443-51996520)
chr3 (118-231)||(54910989-54911102)
chr3 (252-285)||(8966094-8966127)
chr3 (252-285)||(23795956-23795989)
chr3 (88-189)||(36789910-36790009)
chr3 (116-239)||(40784575-40784699)
chr3 (93-130)||(43745373-43745410)
chr3 (252-285)||(45635877-45635910)
chr3 (252-285)||(50029947-50029980)
chr3 (88-231)||(15298235-15298376)
chr3 (69-145)||(37127807-37127882)
chr3 (66-157)||(37520702-37520794)
chr3 (120-235)||(44962840-44962956)
chr3 (120-235)||(48925466-48925581)
chr3 (120-235)||(52782214-52782329)
chr3 (120-235)||(53376828-53376943)
[»] chr2 (57 HSPs)
chr2 (85-235)||(4114682-4114831)
chr2 (85-239)||(16114483-16114637)
chr2 (87-239)||(14947397-14947549)
chr2 (98-239)||(10456079-10456220)
chr2 (66-235)||(38617728-38617896)
chr2 (66-227)||(33494178-33494342)
chr2 (67-235)||(17821759-17821927)
chr2 (110-239)||(16637073-16637200)
chr2 (66-235)||(6438172-6438342)
chr2 (112-235)||(2283212-2283334)
chr2 (88-235)||(22594973-22595120)
chr2 (66-235)||(19268566-19268734)
chr2 (89-167)||(38073130-38073207)
chr2 (60-235)||(25740224-25740399)
chr2 (89-235)||(42640874-42641019)
chr2 (112-206)||(2307323-2307416)
chr2 (120-228)||(6657689-6657797)
chr2 (120-228)||(7504077-7504185)
chr2 (120-228)||(26738276-26738384)
chr2 (120-235)||(5084894-5085009)
chr2 (120-235)||(16814906-16815021)
chr2 (120-235)||(16854186-16854301)
chr2 (120-235)||(18576355-18576470)
chr2 (120-235)||(37725788-37725903)
chr2 (98-235)||(2316870-2317008)
chr2 (124-235)||(21425446-21425557)
chr2 (66-239)||(35895311-35895485)
chr2 (98-235)||(40533488-40533626)
chr2 (93-187)||(8504056-8504148)
chr2 (89-187)||(28318065-28318161)
chr2 (98-187)||(25712751-25712839)
chr2 (120-228)||(39878974-39879082)
chr2 (68-239)||(40946764-40946936)
chr2 (88-231)||(12071396-12071537)
chr2 (88-164)||(15362492-15362567)
chr2 (120-235)||(36049519-36049634)
chr2 (120-235)||(36192025-36192140)
chr2 (89-235)||(15205766-15205911)
chr2 (120-187)||(44068298-44068364)
chr2 (113-167)||(4108612-4108665)
chr2 (89-187)||(7069480-7069576)
chr2 (89-187)||(7366788-7366884)
chr2 (88-130)||(16718978-16719019)
chr2 (106-235)||(22622459-22622588)
chr2 (252-285)||(4114857-4114890)
chr2 (252-285)||(17821700-17821733)
chr2 (120-228)||(41839898-41840006)
chr2 (89-190)||(45690523-45690623)
chr2 (93-235)||(1580274-1580417)
chr2 (61-145)||(3261233-3261317)
chr2 (88-231)||(5615624-5615767)
chr2 (88-231)||(8362424-8362567)
chr2 (114-206)||(12547633-12547725)
chr2 (120-235)||(13568267-13568382)
chr2 (120-235)||(19635872-19635987)
chr2 (120-235)||(19834465-19834580)
chr2 (120-235)||(36947537-36947652)
[»] scaffold0008 (1 HSPs)
scaffold0008 (64-239)||(45306-45481)
[»] scaffold0174 (1 HSPs)
scaffold0174 (69-190)||(32809-32930)
[»] scaffold0667 (1 HSPs)
scaffold0667 (66-231)||(73-239)
[»] scaffold0005 (2 HSPs)
scaffold0005 (112-181)||(271016-271085)
scaffold0005 (120-235)||(291860-291975)
[»] scaffold0325 (1 HSPs)
scaffold0325 (88-187)||(1237-1334)
[»] scaffold0460 (1 HSPs)
scaffold0460 (60-235)||(8553-8726)
[»] scaffold0923 (1 HSPs)
scaffold0923 (66-138)||(19-91)
[»] scaffold0022 (1 HSPs)
scaffold0022 (120-235)||(166474-166589)
[»] scaffold0349 (1 HSPs)
scaffold0349 (130-228)||(8491-8589)
[»] scaffold0239 (1 HSPs)
scaffold0239 (98-235)||(15618-15756)
[»] scaffold0493 (1 HSPs)
scaffold0493 (120-235)||(1623-1739)
[»] scaffold0271 (1 HSPs)
scaffold0271 (89-145)||(16987-17043)
[»] scaffold0194 (1 HSPs)
scaffold0194 (120-235)||(17552-17667)


Alignment Details
Target: chr5 (Bit Score: 200; Significance: 1e-109; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 17069461 - 17069218
Alignment:
Q  1 ctttgaccttgggtaatgagagaatttcttgtaatgaagcatacaaatcaaatcaaatc-----taaaaggggaacttctacggtgtaatcgtaaattga 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||||||| | |||||||||||    
T  17069461 ctttgaccttgggtaatgagagaatttcttgtaatgaagcatacaaatcaaatcaaatcaaatttaaaaggggaacttctacggtgcactcgtaaattga 17069362  T
Q  96 gatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattc 195  Q
    | |||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17069361 ggtgtaccggtactcctgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttgtcggcatttatattatagaaaatatgattc 17069262  T
Q  196 cagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  17069261 cagaagaaaaacgcatcattcattgtttataagaatcatagtaa 17069218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 85 - 239
Target Start/End: Complemental strand, 36156228 - 36156074
Alignment:
Q  85 tcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattataga 184  Q
    |||||||||||| ||||||||||||  ||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  36156228 tcgtaaattgaggtgtaccggtactcttgctttataaatctataaactaacgatcaattttatgaaataaatagttatttgtcggcatttatattttaga 36156129  T
Q  185 aaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  36156128 aaatatgatttcagaagaaaaatgcatcattcattgtttataagaatcatagtaa 36156074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 87 - 239
Target Start/End: Original strand, 10400722 - 10400874
Alignment:
Q  87 gtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaa 186  Q
    |||||||||| |||| | |||||  |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  10400722 gtaaattgaggtgtatcagtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttgtcggcatttatattttagaaa 10400821  T
Q  187 atatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10400822 atatgatttcagaagaaaaacgcatcattcattgtttataagaatcatagtaa 10400874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 2270806 - 2270957
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| ||||||||||||  |||||||||||| |||||| |||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||    
T  2270806 taaattgaggtgtaccggtactcttgcttcataaatctataaattaacgatcaattttatgaaataaataattatttgtcggcatttatattttagaaaa 2270905  T
Q  188 tatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  2270906 tatgatttcagaagaaaaacgcatcattcactgtttataagaatcatagtaa 2270957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 85 - 239
Target Start/End: Original strand, 24431819 - 24431973
Alignment:
Q  85 tcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattataga 184  Q
    |||||||||||| |||| || || |  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||| ||||    
T  24431819 tcgtaaattgaggtgtatcgatattcttgcttcataaatttataaactaacgatcaattttatgaaataaatagttatttgtcgacatttctattttaga 24431918  T
Q  185 aaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    |||||||||| |||||||||||| ||||||||| |||||||||||||||||||||    
T  24431919 aaatatgatttcagaagaaaaacacatcattcactgtttataagaatcatagtaa 24431973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 69 - 194
Target Start/End: Original strand, 1445729 - 1445854
Alignment:
Q  69 aacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcg 168  Q
    ||||||||||||  | ||||||||||||||||| ||||| |  | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1445729 aacttctacggtacattcgtaaattgagatgtatcggtattcttacttcataaatttataaactaacgatcaattttatgaaataaatagttatttgtcg 1445828  T
Q  169 gcatttatattatagaaaatatgatt 194  Q
    ||||||||||| ||||||||| ||||    
T  1445829 gcatttatattttagaaaatacgatt 1445854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 85 - 239
Target Start/End: Original strand, 13645539 - 13645693
Alignment:
Q  85 tcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattataga 184  Q
    |||||||||| | ||||||| ||||  | |||| ||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||  ||||    
T  13645539 tcgtaaattgtggtgtaccgttactcttacttcctaaatctataaattaacgatcaattttatgaaataaatagttatttgtcggcatttatatcttaga 13645638  T
Q  185 aaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    ||| || ||| || ||||||||| ||||||||||||||||||||| |||| ||||    
T  13645639 aaacatcatttcataagaaaaacacatcattcattgtttataagagtcatggtaa 13645693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 119 - 239
Target Start/End: Original strand, 40584916 - 40585036
Alignment:
Q  119 taaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcat 218  Q
    |||||||||||| | |||||||||||||| | ||||||||||||||||||||||||||||| |||||||||| ||| || ||||||||| ||||||||||    
T  40584916 taaatttataaattgacgatcaattttatgagataaatagttatttgtcggcatttatattttagaaaatatcatttcataagaaaaacacatcattcat 40585015  T
Q  219 tgtttataagaatcatagtaa 239  Q
    | ||| |||||||||||||||    
T  40585016 tttttgtaagaatcatagtaa 40585036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 120 - 239
Target Start/End: Original strand, 39041360 - 39041479
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcatt 219  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||| || ||||||||| |||||||||||    
T  39041360 aaatttataaattaatgatcaattttatgaaataaatagttatttgtcggcatttatattttagaaaatatcatttcacaagaaaaacacatcattcatt 39041459  T
Q  220 gtttataagaatcatagtaa 239  Q
    ||| |||||||  |||||||    
T  39041460 gttcataagaacaatagtaa 39041479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 43059538 - 43059657
Alignment:
Q  119 taaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcat 218  Q
    |||||||||||| ||| |||||||||||| |||||| |||||||||||||||||||||||  |||||||||| ||| || ||||||||| ||| ||||||    
T  43059538 taaatttataaattaatgatcaattttatgaaataattagttatttgtcggcatttatatcttagaaaatatcatttcataagaaaaacacataattcat 43059637  T
Q  219 tgtttataagaatcatagta 238  Q
    ||||| ||||| ||||||||    
T  43059638 tgtttgtaagagtcatagta 43059657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 105 - 239
Target Start/End: Original strand, 10568520 - 10568653
Alignment:
Q  105 gtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaa 204  Q
    |||||| |||||| ||||| |||||| ||| ||| |||||||| ||||||||||||||||| ||||||||||||| || ||||||  ||| || ||||||    
T  10568520 gtacttttgcttcctaaatctataaattaatgattaattttatgaaataaatagttatttgccggcatttatattttaaaaaata-catttcataagaaa 10568618  T
Q  205 aacgcatcattcattgtttataagaatcatagtaa 239  Q
    ||| ||| ||| |||||||||| ||||||||||||    
T  10568619 aacacattatttattgtttatacgaatcatagtaa 10568653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 235
Target Start/End: Complemental strand, 32455655 - 32455533
Alignment:
Q  113 gcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatc 212  Q
    ||||| |||||||||| | |||  ||||||||||| ||||||||||||||||||||||||||||||   ||||||||| ||| || |||||||||  ||     
T  32455655 gcttcctaaatttatacattaataatcaattttatgaaataaatagttatttgtcggcatttatatctcagaaaatatcatttcataagaaaaacatatt 32455556  T
Q  213 attcattgtttataagaatcata 235  Q
    |||||||||||||  ||||||||    
T  32455555 attcattgtttatttgaatcata 32455533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 13091319 - 13091148
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||||||||||||||  |  |||||||| || ||||||||||||  | ||||| ||||||||||| |||| |||| |||||| ||||||| || ||||||    
T  13091319 gggaacttctacggtacacccgtaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagctatttg 13091220  T
Q  166 tcggcatttatattatagaaaatatgattccagaag-aaaaacgcatca-ttcattgtttataagaatcata 235  Q
    | |  ||||||||| |||||||||| ||| || ||| |||||  ||||| |||||||||||||| |||||||    
T  13091219 ttgatatttatattttagaaaatatcatttcataagaaaaaaaacatcatttcattgtttataaaaatcata 13091148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 93 - 239
Target Start/End: Complemental strand, 13119178 - 13119032
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatga 192  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||| ||||||| ||||||||| ||||| ||   ||||||||| || | || || |    
T  13119178 tgaggtgtaccggtactcctgcttcataattttataaattaacgatcatttttatataataaatagctatttttcaatatttatattttatagaacatta 13119079  T
Q  193 ttccagaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    || || ||||||||  ||||| |||||||||||||||||| |||||||    
T  13119078 tttcataagaaaaa-acatcatttcattgtttataagaattatagtaa 13119032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 98 - 235
Target Start/End: Complemental strand, 29744276 - 29744139
Alignment:
Q  98 tgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattcca 197  Q
    ||||||||||||| ||||||| ||||||||||| |||| |||| |||||| ||||||| || ||||| | |  ||||||||| |||||||||| ||| ||    
T  29744276 tgtaccggtacttttgcttcaaaaatttataaattaactatcatttttatgaaataaagagctatttattgatatttatattttagaaaatatcatttca 29744177  T
Q  198 gaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
     ||||||||  ||||| |||||| ||||||| |||||||    
T  29744176 taagaaaaa-acatcatttcattatttataaaaatcata 29744139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 206
Target Start/End: Complemental strand, 31588617 - 31588501
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaat 188  Q
    |||||||| ||||||||||||| || |||||||||||||||| ||| |||| ||||||| ||||||| |  ||||||||   ||||||||| ||||||||    
T  31588617 aaattgaggtgtaccggtacttttgtttcataaatttataaattaatgatc-attttatgaaataaaaaactatttgtcaatatttatattttagaaaat 31588519  T
Q  189 atgattccagaagaaaaa 206  Q
    || ||| || ||||||||    
T  31588518 atcatttcataagaaaaa 31588501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 9589591 - 9589444
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaat 188  Q
    ||||| || |||| |||||||  | ||||| ||||||||||| |||| |||| |||||| ||||||| || ||||||| |  ||||||| | ||||||||    
T  9589591 aaattaaggtgtatcggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagctatttgttgatatttatactttagaaaat 9589492  T
Q  189 atgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    || ||| ||  ||||||| |||||| |||||||||||||| |||||||    
T  9589491 atcatttcatgagaaaaaagcatcatttcattgtttataaaaatcata 9589444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 104 - 239
Target Start/End: Original strand, 23258567 - 23258704
Alignment:
Q  104 ggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaa 203  Q
    ||||||| | ||| |||||| || ||| |||||||||||||||| ||||||| | |||||| ||| |||||||||| |  ||||| | ||| || |||||    
T  23258567 ggtacttttactttataaatctacaaattaacgatcaattttattaaataaagaattatttatcgacatttatattttgaaaaatttcatttcataagaa 23258666  T
Q  204 aaacg--catcattcattgtttataagaatcatagtaa 239  Q
    ||| |  |||| || |||||||||||||||||||||||    
T  23258667 aaaagaacatcttttattgtttataagaatcatagtaa 23258704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 67 - 231
Target Start/End: Original strand, 40563116 - 40563281
Alignment:
Q  67 ggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattt-tataaaataaatagttatttg 165  Q
    ||||||||||||||  | || |||| |||| ||||||| ||||  |||||||||| |||||||| ||||||||| ||| | | ||||||||| |||||||    
T  40563116 ggaacttctacggtacactcataaaatgaggtgtaccgatactcttgcttcataattttataaattaacgatcattttgtgtgaaataaataattatttg 40563215  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaat 231  Q
    ||  |||||||||| || | || || ||| || ||||||||  ||||| ||||||||||||||||||    
T  40563216 tcaacatttatattttatagaacatcatttcataagaaaaa-acatcatttcattgtttataagaat 40563281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 67 - 231
Target Start/End: Original strand, 39816506 - 39816670
Alignment:
Q  67 ggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgt 166  Q
    ||||||||||||||  | ||  ||| |||| ||||||||||||  |||||||||| |||||||| ||||||||| |||| | |||||||||  ||||| |    
T  39816506 ggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaacgatcatttttgttaaataaataactatttat 39816605  T
Q  167 cggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaat 231  Q
    |  |||||||||| || | ||||| ||| || ||||||||   |||| ||||||||||||||||||    
T  39816606 caacatttatattttatagaatatcatttcataagaaaaa-atatcatttcattgtttataagaat 39816670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 14967614 - 14967466
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaat 188  Q
    ||||| || |||| |||||||  | ||||| ||||||||||| |||| |||| |||||| ||||||| || ||||||| |  || |||||| ||||||||    
T  14967614 aaattaaggtgtatcggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagctatttgttgatatctatattttagaaaat 14967515  T
Q  189 atgattccagaag-aaaaacgcatca-ttcattgtttataagaatcata 235  Q
    || ||| || ||| ||||| |||||| |||||||||||||| |||||||    
T  14967514 atcatttcataagaaaaaaagcatcatttcattgtttataaaaatcata 14967466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 2011079 - 2011175
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| ||||||| |||| |||||||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  2011079 aaattgaggtgtaccgatact-ctgcttcataaatttataaattaatgatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 2011175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 16602384 - 16602480
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||||||| || |||| |||||||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  16602384 aaattgagatgtaacgatact-ctgcttcataaatttataaattaatgatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 16602480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 13588919 - 13589027
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| ||||||||| ||| || ||||||| || ||||||||   ||||||||| |||||||||| ||| || ||||||||  ||||| |||||    
T  13588919 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaatatcatttcataagaaaaa-tcatcatttcat 13589017  T
Q  219 tgtttataag 228  Q
    ||||||||||    
T  13589018 tgtttataag 13589027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 239
Target Start/End: Complemental strand, 34259912 - 34259772
Alignment:
Q  100 taccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccag 198  Q
    |||||||||| ||||||||||| |||||||| |||||||||  ||||||  ||||||||  ||||||||   ||||||||| || | || || ||| ||     
T  34259912 taccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaataactatttgtcaatatttatattttatagaacatcatttcat 34259813  T
Q  199 aagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    ||||||||  ||||| |||||||||||||||||| |||||||    
T  34259812 aagaaaaa-acatcatttcattgtttataagaattatagtaa 34259772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 231
Target Start/End: Original strand, 18002682 - 18002816
Alignment:
Q  96 gatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattc 195  Q
    |||||||||||||| |||||||| ||||||||||  ||| |||  ||||||||||||||| |||||||| ||   ||||||||| ||||||| || | |     
T  18002682 gatgtaccggtactcctgcttcaaaaatttataatttaatgat-tattttataaaataaagagttatttatcaatatttatattttagaaaacatcagtt 18002780  T
Q  196 cagaagaaaaacgcatca-ttcattgtttataagaat 231  Q
     | ||||||||  ||||| ||||||||||||||||||    
T  18002781 tataagaaaaa-acatcatttcattgtttataagaat 18002816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 28770001 - 28770116
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| ||||||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||  ||||| |||||    
T  28770001 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaa-tcatcatttcat 28770099  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  28770100 tgtttataaggatcata 28770116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 39979726 - 39979667
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataa 149  Q
    |||||||| ||||||| ||||||||||||||||||||||||| ||| |||| |||||||||    
T  39979726 aaattgaggtgtaccgatacttctgcttcataaatttataaattaatgatc-attttataa 39979667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 235
Target Start/End: Original strand, 8068351 - 8068489
Alignment:
Q  98 tgtaccggtacttctgcttcataaatt-tataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattcc 196  Q
    ||||||||||||  || |||||||| | |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| |    
T  8068351 tgtaccggtactcttgtttcataaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttc 8068450  T
Q  197 agaagaaaaacgcatcatt-cattgtttataagaatcata 235  Q
    | ||||||||| ||||||| ||||||||||||| ||||||    
T  8068451 ataagaaaaac-catcatttcattgtttataaggatcata 8068489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 9499785 - 9499708
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    ||||||||| ||||||| |||| |||||||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||    
T  9499785 taaattgaggtgtaccgatact-ctgcttcataaatttataaattaaggatc-attttatgaaataagttgttatttgtc 9499708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 187
Target Start/End: Original strand, 10118266 - 10118363
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| ||||| | || |||||||||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  10118266 taaattgaggtgtactgata-ttctgcttcataaatttataaattaatgatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 10118363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 163
Target Start/End: Original strand, 13956605 - 13956679
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatt 163  Q
    ||||||||| |||| || |||  |||||||| ||||||||||| |||||||| |||||||||||||| ||||||||    
T  13956605 taaattgaggtgtatcgatacccctgcttcacaaatttataaattaacgatc-attttataaaataagtagttatt 13956679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 235
Target Start/End: Complemental strand, 27980153 - 27980011
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatga 192  Q
    ||||||||| |||||||  || ||||||| |||||||| ||||||||| ||||||  ||||| ||| ||||||||   ||||||||| || | || || |    
T  27980153 tgagatgtagcggtactcttgtttcataattttataaattaacgatcatttttatgtaataattagctatttgtcaatatttatattttatagaacataa 27980054  T
Q  193 ttccagaagaaaaacgcatcattca-ttgtttataagaatcata 235  Q
    || || ||||||||  ||||||| | ||||||||||||||||||    
T  27980053 tttcataagaaaaaa-catcatttaattgtttataagaatcata 27980011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 32624524 - 32624461
Alignment:
Q  124 ttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||| ||||||||| |||||||||||||| |||||||||||   ||||||||| |||||||    
T  32624524 ttataaattaacgatcatttttataaaataaaaagttatttgtcaatatttatattttagaaaa 32624461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 187
Target Start/End: Original strand, 37963049 - 37963116
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||||| ||||||||| |||||||||||||| | |||||||||   ||||||||| |||||||    
T  37963049 aaatttataaattaacgatcatttttataaaataaaaatttatttgtcaatatttatattttagaaaa 37963116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 178
Target Start/End: Original strand, 38354754 - 38354843
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatat 178  Q
    |||||| || |||| ||||||| ||| ||  |||||||||| ||||  | |||||||||| ||||||||||||||||||||||| ||||||    
T  38354754 taaattaaggtgtatcggtactcctgttttttaaatttatacactacag-tcaattttatgaaataaatagttatttgtcggcacttatat 38354843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 285
Target Start/End: Original strand, 17069164 - 17069197
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||||||||||||||||||||||    
T  17069164 ttatcgctcataataaagaactttgattatttta 17069197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 10688745 - 10688630
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| |||||| || ||| |||||||||| || ||||||||   ||||||||| ||||||| || ||| || |||||||||  |||||| |||    
T  10688745 aaatatataaattaacgaccactttaataaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaact-atcatttcat 10688647  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  10688646 tgtttataaggatcata 10688630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 13544114 - 13544261
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| |  |||| |||||||||| || ||||| ||||  ||| ||||| |||||||||||||| |||||||| ||   ||||||||| || ||||    
T  13544114 taaattgaggtacaccgatacttctgctccaaaaattgataatttaaagatca-ttttataaaataaagagttatttatcaatatttatattttataaaa 13544212  T
Q  188 tatgattccagaagaaaaacgcatcatt-cattgtttataagaatcata 235  Q
     || |||  | ||||||||  ||| ||| ||||||||||||||||||||    
T  13544213 catcattttataagaaaaaaacataatttcattgtttataagaatcata 13544261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 25684415 - 25684300
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  25684415 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 25684317  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  25684316 tgtttataaggatcata 25684300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 31236643 - 31236758
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  31236643 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 31236741  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  31236742 tgtttataaggatcata 31236758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 39540774 - 39540889
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| |||||||||| |  ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  39540774 aaatatataaattaaagatcactttaataaaataaaaatgtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 39540872  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  39540873 tgtttataaggatcata 39540889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 239
Target Start/End: Original strand, 42486632 - 42486778
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt-ataaaataaatagttatttgtcggcatttatattatagaaaatatg 191  Q
    |||| ||||||||||||  | |||||||| |||||||| ||| ||||| |||| ||  ||||||||||||||| ||   ||||||||| || |||| ||     
T  42486632 tgaggtgtaccggtactcatacttcataattttataaattaaagatcattttttatgtaataaatagttattt-tcaatatttatattttataaaacatt 42486730  T
Q  192 attccagaagaaaaacgcatcatt-cattgtttataagaatcatagtaa 239  Q
    ||| || ||||||||  ||||||| |||||||||||||||| |||||||    
T  42486731 atttcataagaaaaaa-catcatttcattgtttataagaattatagtaa 42486778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 29665847 - 29665940
Alignment:
Q  92 ttgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||| ||||||| |||| ||| |||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  29665847 ttgaggtgtaccgatact-ctgtttcataaatttataaattaaggatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 29665940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 38354847 - 38354882
Alignment:
Q  200 agaaaaacgcatcattcattgtttataagaatcata 235  Q
    |||||||| |||||||||||||||||||||||||||    
T  38354847 agaaaaacacatcattcattgtttataagaatcata 38354882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 12336597 - 12336521
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||||| ||||||| |||| |||||||||||||||||||| ||| || | ||||||| |||||| | ||||||||||    
T  12336597 aaattgaggtgtaccgatact-ctgcttcataaatttataaattaaaga-ccattttatgaaataagttgttatttgtc 12336521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 13593305 - 13593381
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||||| ||||||| |||| ||| |||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||    
T  13593305 aaattgaggtgtaccgatact-ctgtttcataaatttataaattaatgatc-attttatgaaataagttgttatttgtc 13593381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 2271011 - 2270978
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  2271011 ttatcgctcataatagagaactttgattatttta 2270978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 22780919 - 22780778
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttattt 164  Q
    |||||||||||||||  | | | ||||| ||||||||||| |||  || || | ||||||||||| |||| ||||  |||| | ||| |||||||| |||    
T  22780919 gggaacttctacggtacacttgcaaattaagatgtaccggcactcttgtttaaaaaatttataaattaactatcattttttgtgaaaaaaatagttgttt 22780820  T
Q  165 gtcggcatttatattatagaaaatatgattccagaagaaaaa 206  Q
    || | |||||||| | |||||||||| ||| || ||||||||    
T  22780819 gttgacatttatagtttagaaaatatcatttcataagaaaaa 22780778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 235
Target Start/End: Complemental strand, 29996867 - 29996732
Alignment:
Q  100 taccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagt-tatttgtcggcatttatattatagaaaatatgattccag 198  Q
    ||||||||||  ||||  ||||||||||||| ||||||||| |||||| ||||||| |   ||||||||   ||||||||| ||||||| || ||| |      
T  29996867 taccggtactcttgctctataaatttataaattaacgatca-ttttatgaaataaaaaaaatatttgtccatatttatattttagaaaacatcatttcgt 29996769  T
Q  199 aagaaaaacgcatcatt-cattgtttataagaatcata 235  Q
    ||||||||  ||||||| ||||||||||||||||||||    
T  29996768 aagaaaaaa-catcatttcattgtttataagaatcata 29996732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Original strand, 32455473 - 32455506
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  32455473 ttatcgctcataatagagaactttgattatttta 32455506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Original strand, 36156020 - 36156053
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  36156020 ttatcgctcataatagagaactttgattatttta 36156053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 145
Target Start/End: Complemental strand, 40803729 - 40803648
Alignment:
Q  64 aggggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt 145  Q
    |||| ||||||||||||| | ||  ||| |||| |||||||||||| ||||||| ||| ||||||||  |||||||| ||||    
T  40803729 agggaaacttctacggtgcactcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacgatcattttt 40803648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 235
Target Start/End: Complemental strand, 41631519 - 41631455
Alignment:
Q  171 atttatattatagaaaatatgattccagaagaaaaacgcatcatt-cattgtttataagaatcata 235  Q
    ||||||||| ||||||| || ||| || ||||||||| ||||||| ||||||||||||||||||||    
T  41631519 atttatattttagaaaacatcatttcataagaaaaac-catcatttcattgtttataagaatcata 41631455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 43059712 - 43059679
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  43059712 ttatcgctcataatagagaactttgattatttta 43059679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 3882183 - 3882068
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| || |||| || ||| || ||||||||| ||||||| |||    
T  3882183 aaatatataaattaatgatcactttaatgaaataaaaaggtatttgtcaatatttatattttaaaaaacatcatttcataagaaaaac-catcatttcat 3882085  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  3882084 tgtttataaggatcata 3882068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 4839522 - 4839570
Alignment:
Q  142 ttttataaaataaatagttatttgtcggcatttatattatagaaaatat 190  Q
    |||||||||||||| ||||||||||||   |||||||| ||||||||||    
T  4839522 ttttataaaataaagagttatttgtcgatttttatattttagaaaatat 4839570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 15264343 - 15264279
Alignment:
Q  172 tttatattatagaaaatatgattccagaagaaaaacgcatcatt-cattgtttataagaatcata 235  Q
    |||||||| |||||||||| ||| || ||||||||  ||||||| |||| |||||||||||||||    
T  15264343 tttatattttagaaaatattatttcataagaaaaaaacatcatttcattctttataagaatcata 15264279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 233
Target Start/End: Complemental strand, 19126287 - 19126152
Alignment:
Q  98 tgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattcca 197  Q
    |||| |||||||  || |||||||| ||  ||| ||||||||| ||| || ||||||| || |||||||    ||||||||| ||||||| || ||| ||    
T  19126287 tgtaacggtactcttgtttcataaaatttaaaattaacgatcactttaatgaaataaaaagatatttgttaatatttatattttagaaaacatcatttca 19126188  T
Q  198 gaagaaaaacgcatcatt-cattgtttataagaatca 233  Q
     ||||||||| ||||||| ||||||||||||| ||||    
T  19126187 taagaaaaac-catcatttcattgtttataaggatca 19126152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 23189122 - 23189237
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || |||||||||  |||||| |||    
T  23189122 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaaca-atcatttcat 23189220  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  23189221 tgtttataaggatcata 23189237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 23258754 - 23258722
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttt 284  Q
    ||||||||||||||| |||||||||||||||||    
T  23258754 ttatcgctcataatagagaactttgattatttt 23258722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 32063580 - 32063695
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| || |||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||  ||||||| |||    
T  32063580 aaatatataaattaccgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaat-catcatttcat 32063678  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  32063679 tgtttataaggatcata 32063695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 34859489 - 34859604
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| |||| |||| ||| || ||||||| || ||||| ||   ||||||||| ||||||| || ||| || ||||||||| ||| | |||||    
T  34859489 aaatttataaattaacaatcactttaatgaaataaaaaggtatttatcaatatttatattttagaaaacatcatttcataagaaaaac-cattatttcat 34859587  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  34859588 tgtttataaggatcata 34859604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 285
Target Start/End: Complemental strand, 39041532 - 39041500
Alignment:
Q  253 tatcgctcataataaagaactttgattatttta 285  Q
    ||||||| |||||||||||||||||||||||||    
T  39041532 tatcgcttataataaagaactttgattatttta 39041500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 43167254 - 43167179
Alignment:
Q  160 tatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattc-attgtttataagaatcata 235  Q
    ||||||||| | |||||||| |||||||||| ||| || ||||||||  ||| |||| |||||||||||||||||||    
T  43167254 tatttgtcgacttttatattttagaaaatattatttcataagaaaaaa-cataattccattgtttataagaatcata 43167179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 43411572 - 43411686
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||||||||| ||| |||||||||| || ||||||||   ||||||||| || |||| || ||| || ||||||||  ||||||| |||    
T  43411572 aaatatataaattaacgatcactttaataaaataaaaaggtatttgtcaatatttatatt-taaaaaacatcatttcataagaaaaat-catcatttcat 43411669  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  43411670 tgtttataaggatcata 43411686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 5e-65; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 66 - 239
Target Start/End: Original strand, 29023619 - 29023792
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||||||||||||||  | |||||||||||| ||||||||||||  |||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  29023619 gggaacttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttg 29023718  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    |||||||||||||| | |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  29023719 tcggcatttatattttggaaaatatgatttcagaagaaaaatgcatcattcattgtttataagaatcatagtaa 29023792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 65 - 239
Target Start/End: Original strand, 31644409 - 31644583
Alignment:
Q  65 ggggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttattt 164  Q
    ||||||||||||||||  | |||||||||||| |||| |||||||  |||||||||||| ||||||||||| ||||||||||| ||||||||||||||||    
T  31644409 ggggaacttctacggtacactcgtaaattgaggtgtatcggtactcttgcttcataaatctataaactaacaatcaattttatgaaataaatagttattt 31644508  T
Q  165 gtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||    
T  31644509 gtcggcatttatattttagaaaatatgatttcagaagaaaaacgtatcattcattatttataagaatcatagtaa 31644583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 67 - 235
Target Start/End: Complemental strand, 6094056 - 6093888
Alignment:
Q  67 ggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgt 166  Q
    |||| |||||||||  | ||||||||  ||||||| |||||||  || ||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  6094056 ggaatttctacggtacactcgtaaatcaagatgtatcggtactcttgtttcataaatctataaactaacgatcaattttatgaaataaatagttatttgt 6093957  T
Q  167 cggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcata 235  Q
    ||||||||||||  |||||||||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  6093956 cggcatttatatcttagaaaatatgatttcagaagaaaaatgcatcattcattgtttataagagtcata 6093888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 66 - 239
Target Start/End: Complemental strand, 21970713 - 21970540
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||||||||||||||  | || ||||||  | ||||||||||||  | |||| ||||| |||||| |||||||||||||||| |||||||||||||||||    
T  21970713 gggaacttctacggtacactcataaattctggtgtaccggtactcttacttcctaaatctataaattaacgatcaattttatgaaataaatagttatttg 21970614  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    |||||||||||||| || ||||||| ||| || ||||||||   |||||||||||||||||| |||||||||||    
T  21970613 tcggcatttatattttacaaaatatcatttcataagaaaaatatatcattcattgtttataaaaatcatagtaa 21970540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 68 - 239
Target Start/End: Original strand, 18667689 - 18667863
Alignment:
Q  68 gaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||||||||||  | |||||||||| | ||||||||||||  |  ||| ||||| |||||| |||||||||||||||| | |||||||||||||| ||    
T  18667689 gaacttctacggtacactcgtaaattgtggtgtaccggtactcttaattcctaaatctataaattaacgatcaattttatgagataaatagttatttatc 18667788  T
Q  168 gg---catttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    ||   |||||||||| |||||||||| |||  | || |||||| ||||||||||||||||||||||| |||||||    
T  18667789 ggcaacatttatattttagaaaatatcattttataaaaaaaacacatcattcattgtttataagaattatagtaa 18667863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 189
Target Start/End: Original strand, 4979097 - 4979222
Alignment:
Q  63 aaggggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttat 162  Q
    ||||||||||||||||||  | | ||||||| || ||||| |||| || |  |||||||||||||||| ||| |||||||||||| ||||||||||||||    
T  4979097 aaggggaacttctacggtacact-gtaaattaaggtgtactggtatttttatttcataaatttataaattaatgatcaattttatgaaataaatagttat 4979195  T
Q  163 ttgtcggcatttatattatagaaaata 189  Q
    || |||| ||||||||| |||||||||    
T  4979196 ttatcggtatttatattttagaaaata 4979222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 10887832 - 10887974
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| |||||||||||| || ||||| ||||||||||  |||||||  ||||||||||||||| |||||||| ||   ||||||||| || ||||    
T  10887832 taaattgaggtgtaccggtactcctacttcaaaaatttataatttaacgat-tattttataaaataaagagttatttatcaatatttatattttaaaaaa 10887930  T
Q  188 tatgattccagaagaaaaacgcatca-ttcattgtttataagaat 231  Q
    ||| |||  | ||||||||  ||||| ||||||||||||||||||    
T  10887931 tattattttataagaaaaa-acatcatttcattgtttataagaat 10887974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 88 - 187
Target Start/End: Complemental strand, 21998997 - 21998900
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| ||||||| |||| |||||||||||||||||||| ||| ||||| ||||||||||||| | ||||||||||   ||||||||| |||||||    
T  21998997 taaattgaggtgtaccgatact-ctgcttcataaatttataaattaatgatca-ttttataaaataagttgttatttgtcattatttatattttagaaaa 21998900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 24081169 - 24081315
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaat 188  Q
    |||||||||||||  ||||||| |||| |||||||||||||| ||||||| |||||||| |||||||  | ||||||||   ||||||||| ||| |||     
T  24081169 aaattgagatgtattggtacttttgctccataaatttataaattaacgat-aattttatgaaataaaatgctatttgtcaatatttatattttagtaaac 24081267  T
Q  189 atgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    || ||| || ||||||||  | ||| || |||||||||||||||||||    
T  24081268 atcatttcataagaaaaaaacttcattttattgtttataagaatcata 24081315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 1339755 - 1339611
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaat 188  Q
    |||||||| |||||| |||||||||||||| ||||||||||  |||||||| ||||||| ||||||| |||||||| ||   ||||||||| || ||||     
T  1339755 aaattgaggtgtaccagtacttctgcttca-aaatttataatttaacgatc-attttatgaaataaagagttatttatcaatatttatattttataaaac 1339658  T
Q  189 atgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    || |||  | ||||||||  | ||| ||||||||||||||||||||||    
T  1339657 atcattttataagaaaaa-acttcatttcattgtttataagaatcata 1339611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 229835 - 229931
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| ||||||| |||| |||||||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  229835 aaattgaggtgtaccgatact-ctgcttcataaatttataaattaatgatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 229931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 239
Target Start/End: Complemental strand, 4509835 - 4509663
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||||||||||||||  | ||  ||| |||| |||||||||||| ||||||||||| |||||||| |||||||   ||||||  ||||||||| |||||     
T  4509835 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatattttttatgtaataaatagctattt- 4509737  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    ||   ||||||||| || | || || ||| || ||||||||  ||||| |||||||||||||||||| |||||||    
T  4509736 tcaatatttatattttatagaacattatttcataagaaaaa-acatcatttcattgtttataagaattatagtaa 4509663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 9226553 - 9226445
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| ||||||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||| |||||    
T  9226553 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 9226455  T
Q  219 tgtttataag 228  Q
    ||||||||||    
T  9226454 tgtttataag 9226445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 12782917 - 12782880
Alignment:
Q  202 aaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    ||||||||||||||||||||||||||||||||||||||    
T  12782917 aaaaacgcatcattcattgtttataagaatcatagtaa 12782880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 34315179 - 34315287
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| ||||||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||| |||||    
T  34315179 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 34315277  T
Q  219 tgtttataag 228  Q
    ||||||||||    
T  34315278 tgtttataag 34315287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 7344344 - 7344486
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| |||||||||||| || || || ||||||||||  ||| |||  ||||||| ||||||| |||||||| |||  ||||||||| |||||||    
T  7344344 taaattgaggtgtaccggtactcctactccaaaaatttataatttaaggat-tattttatgaaataaagagttatttatcgatatttatattttagaaaa 7344442  T
Q  188 tatgattccagaagaaaaacgcatca-ttcattgtttataagaat 231  Q
    ||| |||  | ||||||||  ||| | ||||||||||||||||||    
T  7344443 tatcattttataagaaaaa-acattatttcattgtttataagaat 7344486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 6295760 - 6295665
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| |||| ||||||| |||||||||||||||||||| ||| |||  ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  6295760 aaattgaggtgtatcggtact-ctgcttcataaatttataaattaatgat--attttattaaataagttgttatttgtcattatttatattttagaaaa 6295665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 6302570 - 6302475
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| |||| ||||||| |||||||||||||||||||| ||| |||  ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  6302570 aaattgaggtgtatcggtact-ctgcttcataaatttataaattaatgat--attttattaaataagttgttatttgtcattatttatattttagaaaa 6302475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 1339206 - 1339091
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  1339206 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 1339108  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  1339107 tgtttataaggatcata 1339091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 1705989 - 1705914
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttattt 164  Q
    ||||||||| |||||||||||| |||||||| | ||||||||  |||||||  ||||||| ||||||| ||||||||    
T  1705989 taaattgaggtgtaccggtactcctgcttcaaatatttataatttaacgat-tattttatgaaataaagagttattt 1705914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 235
Target Start/End: Complemental strand, 2198166 - 2198019
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||| || ||||||||||| |||  |||||||||  ||||  ||| ||||| ||||||  || ||| || ||||| ||| | |||||||| |||||||    
T  2198166 taaattaaggtgtaccggtacatctatttcataaatcaataagttaaagatcatttttatgtaacaaagagctatttatcgacttttatattttagaaaa 2198067  T
Q  188 tatgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    ||| ||| || ||||||||  ||| | ||||||||||||||||||||||    
T  2198066 tattatttcataagaaaaa-acataatttcattgtttataagaatcata 2198019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 11763200 - 11763252
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt 145  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||||| ||||    
T  11763200 tgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttt 11763252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 18871275 - 18871160
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  18871275 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 18871177  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  18871176 tgtttataaggatcata 18871160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 27109058 - 27109106
Alignment:
Q  118 ataaatttataaactaacgatcaattttataaaataaatagttatttgt 166  Q
    ||||||||||||| ||||||||| |||||| ||||||| ||||||||||    
T  27109058 ataaatttataaattaacgatcatttttatgaaataaagagttatttgt 27109106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 166
Target Start/End: Original strand, 27150855 - 27150903
Alignment:
Q  118 ataaatttataaactaacgatcaattttataaaataaatagttatttgt 166  Q
    ||||||||||||| ||||||||| |||||| ||||||| ||||||||||    
T  27150855 ataaatttataaattaacgatcatttttatgaaataaagagttatttgt 27150903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 33954804 - 33954688
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||  ||||||| |||    
T  33954804 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaaaccatcatttcat 33954705  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  33954704 tgtttataaggatcata 33954688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 187
Target Start/End: Complemental strand, 926926 - 926829
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| ||||||  |||| |||||||||||||||||||| |||  ||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  926926 taaattgaggtgtaccaatact-ctgcttcataaatttataaattaattatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 926829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 239
Target Start/End: Complemental strand, 9687134 - 9687008
Alignment:
Q  114 cttcataaatttataaactaacgatcaatttt-ataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatc 212  Q
    |||| ||| |||||||| ||||||||| |||| || |||||||||  ||||| ||   ||||||||| || ||||||| ||| || ||||||||  ||||    
T  9687134 cttcttaattttataaattaacgatcattttttatgaaataaataactatttatcaatatttatattttataaaatatcatttcataagaaaaaa-catc 9687036  T
Q  213 a-ttcattgtttataagaatcatagtaa 239  Q
    | |||||||||||| |||||||||||||    
T  9687035 aattcattgtttatcagaatcatagtaa 9687008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 228
Target Start/End: Original strand, 27719069 - 27719167
Alignment:
Q  130 actaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataag 228  Q
    ||||||||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||| |||||||||||||||    
T  27719069 actaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcattgtttataag 27719167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 33574759 - 33574680
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt 145  Q
    |||||||||||||||  | ||  ||| |||| ||||||||||||  |||||||||| |||||||| ||||||||| ||||    
T  33574759 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaacgatcattttt 33574680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 33574937 - 33574858
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt 145  Q
    |||||||||||||||  | ||  ||| |||| ||||||||||||  |||||||||| |||||||| ||||||||| ||||    
T  33574937 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgcttcataattttataaattaacgatcattttt 33574858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 11273408 - 11273484
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    ||||||| |||||| | ||||| ||||||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||    
T  11273408 aaattgaaatgtactgatactt-tgcttcataaatttataaattaaagatc-attttatgaaataagttgttatttgtc 11273484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 16893280 - 16893203
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||||| ||||||||||||    ||||||||||||||||| |||||||   |||||| |||||||||| ||||||||    
T  16893280 aaattgaggtgtaccggtactctcacttcataaatttataaattaacgat-tgttttattaaataaataggtatttgtc 16893203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Original strand, 12782825 - 12782858
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  12782825 ttatcgctcataatagagaactttgattatttta 12782858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 239
Target Start/End: Complemental strand, 14779276 - 14779136
Alignment:
Q  99 gtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccag 198  Q
    |||||||||||  |  ||||||| |||||||| |||||||   |||||| |||||||||  ||||| ||   ||||||||| || | || || ||| ||     
T  14779276 gtaccggtactcttttttcataattttataaattaacgatattttttatgaaataaataactatttatcaatatttatattttatagaacatcatttcat 14779177  T
Q  199 aagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    ||||||||  ||||| ||||||||||||||||||||||||||    
T  14779176 aagaaaaa-acatcagttcattgtttataagaatcatagtaa 14779136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 29023844 - 29023811
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  29023844 ttatcgctcataatagagaactttgattatttta 29023811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 31644637 - 31644604
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  31644637 ttatcgctcataatagagaactttgattatttta 31644604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 167
Target Start/End: Original strand, 3953943 - 3954002
Alignment:
Q  107 acttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||| || |||||||||||||| |||| || | ||||||||||||| ||||||||||||    
T  3953943 acttctactacataaatttataaattaacaatta-ttttataaaataagtagttatttgtc 3954002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 21294173 - 21294098
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttattt 164  Q
    ||||||||| |||||||||||| |||||||| | ||||| ||  |||||||  ||||||| ||||||| ||||||||    
T  21294173 taaattgaggtgtaccggtactcctgcttcaaatatttacaatgtaacgat-tattttatgaaataaagagttattt 21294098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 35224884 - 35224999
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||  ||||||| |||    
T  35224884 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaat-catcatttcat 35224982  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  35224983 tgtttataaggatcata 35224999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 3e-63; HSPs: 97)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 68 - 238
Target Start/End: Complemental strand, 30548014 - 30547844
Alignment:
Q  68 gaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||||||||||  | |||||||||||| ||||| ||||||  |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  30548014 gaacttctacggtacactcgtaaattgaggtgtacaggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttgtc 30547915  T
Q  168 ggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagta 238  Q
    | |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  30547914 gacatttatattttagaaaatatgatttcagaagaaaaacgcatcattcattgtttataagaatcatagta 30547844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 34100708 - 34100886
Alignment:
Q  61 aaaaggggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagtt 160  Q
    |||| ||||||||||| |||  | | |||||||||| ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  34100708 aaaaagggaacttctatggtacacttgtaaattgaggtgtaccggtactattgcttcataaatctataaactaacgatcaattttatgaaataaatagtt 34100807  T
Q  161 atttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    |||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34100808 atttgtcgacatttatattttagaaaatatgatttcagaagaaaaacgcatcattcattgtttataagaatcatagtaa 34100886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 66 - 239
Target Start/End: Original strand, 51610536 - 51610711
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||||||||||||||  | |||||||||||| |||| |||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  51610536 gggaacttctacggtacattcgtaaattgaggtgtatcggtactcttgcttcataaatttataaactaacaatcaattttatgaaataaatagttatttg 51610635  T
Q  166 tcggcatt--tatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    ||||||||  |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  51610636 tcggcatttatatattttagaaaatatgatttcagaagaaaaacgcatcattcattgtttataagaatcatagtaa 51610711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 85 - 239
Target Start/End: Original strand, 25081777 - 25081931
Alignment:
Q  85 tcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattataga 184  Q
    |||||||||||| ||||| ||||||  || ||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||    
T  25081777 tcgtaaattgaggtgtactggtactcttgtttcataaatctataaactaacgatcaattttatgaaataaataattatttgtcggcatttatattttaga 25081876  T
Q  185 aaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  25081877 aaatatgatttcagaagaaaaacgcatcattaattgtttataagaatcatagtaa 25081931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 66 - 239
Target Start/End: Complemental strand, 24511985 - 24511821
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    ||||| |||||||||  | |||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24511985 gggaatttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcataaatttataaactaacgatcaattttatgaaataaatagttatttg 24511886  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    | |||||||||||| ||||||||| |||| || |         | |||||||||||||||||||||||||||||    
T  24511885 ttggcatttatattttagaaaatacgatttcata---------cgtcattcattgtttataagaatcatagtaa 24511821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 42958860 - 42958962
Alignment:
Q  85 tcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattataga 184  Q
    |||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  42958860 tcgtaaattgagatgtaccggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttgtcggcatttatattttaga 42958959  T
Q  185 aaa 187  Q
    |||    
T  42958960 aaa 42958962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 85 - 239
Target Start/End: Complemental strand, 48796416 - 48796262
Alignment:
Q  85 tcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattataga 184  Q
    ||||||| |||| ||||||||||||  | | ||  |||| |||||| ||| |||||||||||| |||||||||||||||||||| |||||||||| ||||    
T  48796416 tcgtaaaatgaggtgtaccggtactcttccatcccaaatctataaattaatgatcaattttatgaaataaatagttatttgtcgacatttatattttaga 48796317  T
Q  185 aaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    |||||| ||| || ||||||||| ||||||||||||||||||||||| |||||||    
T  48796316 aaatatcatttcataagaaaaacacatcattcattgtttataagaataatagtaa 48796262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 24245536 - 24245651
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcatt 219  Q
    |||| |||||| ||| |||||||||||| ||||||||||||||||||| ||||||||||| |||||||||| ||| || ||||||||| |||||||||||    
T  24245536 aaatctataaattaatgatcaattttattaaataaatagttatttgtcagcatttatattttagaaaatatcatttcataagaaaaacacatcattcatt 24245635  T
Q  220 gtttataagaatcata 235  Q
    ||||||||||||||||    
T  24245636 gtttataagaatcata 24245651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 239
Target Start/End: Complemental strand, 12179005 - 12178831
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||||||| ||||||  | ||| |||||||| ||||||||||||  |||||| ||||| |||||| ||||||| |||||||| |||||||||||||||||    
T  12179005 gggaacttttacggtacactcgcaaattgaggtgtaccggtactcttgcttcctaaatctataaattaacgattaattttatgaaataaatagttatttg 12178906  T
Q  166 tcggcatttatattatagaaaatatgattcca-gaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
     || |||||||||| |||||||||| ||| ||  || |||||| | |||||||||||||||| ||||||||||||    
T  12178905 ccgacatttatattttagaaaatattatttcataaaaaaaaacacttcattcattgtttatacgaatcatagtaa 12178831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 88 - 231
Target Start/End: Complemental strand, 17525821 - 17525678
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||| || |||| ||||||| ||||||| |||||||||| | |||| ||||||||||| ||||||||||||||||||||||||||||||   | ||||    
T  17525821 taaattaaggtgtatcggtactcctgcttcctaaatttatacattaacaatcaattttatgaaataaatagttatttgtcggcatttatatctcaaaaaa 17525722  T
Q  188 tatgattccagaagaaaaacgcatcattcattgtttataagaat 231  Q
    ||| ||| || ||||||||| ||| |||||||||||||||||||    
T  17525721 tatcatttcataagaaaaacacattattcattgtttataagaat 17525678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 32144669 - 32144836
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    ||||||||||| |||  | || |||||| || |||| ||||| | |||||||  ||||||||| | |||| ||||| ||||| |||||||||||||||||    
T  32144669 gggaacttctatggtacactcataaattaaggtgtatcggtattcctgcttccaaaatttatatattaacaatcaactttatgaaataaatagttatttg 32144768  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatca 233  Q
    |||||||||||||   ||||||||| ||| || ||||||||| |||||||||||||||||||||||||    
T  32144769 tcggcatttatatctcagaaaatatcatttcataagaaaaacacatcattcattgtttataagaatca 32144836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 88 - 235
Target Start/End: Complemental strand, 45809829 - 45809682
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||| ||||||| |||||||  |||||| |||||||||| | |||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||     
T  45809829 taaattaagatgtatcggtactcatgcttcctaaatttatacattaacaatcaattttatgaaataaatagttatttgtcggcatttatatcttagaaag 45809730  T
Q  188 tatgattccagaagaaaaacgcatcattcattgtttataagaatcata 235  Q
    ||| |||  | || |||||| |||||||| ||||||||||||||||||    
T  45809729 tatcattttataataaaaacccatcattctttgtttataagaatcata 45809682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 46707366 - 46707513
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||| || |||||||||||| ||||||| |||||||||  | |||| ||||||||||| ||||||| |||||||||||||||||| |||   ||||||    
T  46707366 taaattaaggtgtaccggtactcctgcttcctaaatttatgcattaacaatcaattttatgaaataaaaagttatttgtcggcatttgtatctcagaaaa 46707465  T
Q  188 tatgattccagaagaaaaacgcatcattcattgtttataagaatcata 235  Q
    ||| ||| || ||||||||| ||||||||||||||||||||| |||||    
T  46707466 tatcatttcataagaaaaacacatcattcattgtttataagagtcata 46707513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 44382039 - 44382185
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||| || ||||||||||||  || ||| |||||||||  | |||| ||||||||||| ||||||| ||||||||||| |||||| |||   ||||||    
T  44382039 taaattaaggtgtaccggtactcatgtttcctaaatttatgcattaacaatcaattttatgaaataaaaagttatttgtc-gcatttgtatctcagaaaa 44382137  T
Q  188 tatgattccagaagaaaaacgcatcattcattgtttataagaatcata 235  Q
    ||| ||| || || |||||| ||||||||||||||||||||| |||||    
T  44382138 tatcatttcataaaaaaaacacatcattcattgtttataagagtcata 44382185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 52365643 - 52365696
Alignment:
Q  126 ataaactaacgatcaattttataaaataaatagttatttgtcggcatttatatt 179  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  52365643 ataaactaacgatcaattttatgaaataaatagttatttgtcggcatttatatt 52365696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 239
Target Start/End: Complemental strand, 38261209 - 38261036
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttattt 164  Q
    |||||||||||||||  | || |||| |||| |||||||||||| ||||||||||| ||||| || |||||||||  ||||||  ||||||||| |||||    
T  38261209 gggaacttctacggtacactcataaagtgaggtgtaccggtactcctgcttcataattttat-aattaacgatcattttttatgtaataaatagctattt 38261111  T
Q  165 gtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    |||  |||||||||| || | ||||| ||  || ||||||||  ||||| |||||||||||||||||| |||||||    
T  38261110 gtcaacatttatattttatagaatatcatctcataagaaaaa-acatcatttcattgtttataagaattatagtaa 38261036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 50239277 - 50239447
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||||||||||||||  |  || ||||| || ||||||||||||  | ||||| ||||||||||| |||| |||| |||||| ||||||| |  |||||     
T  50239277 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaaaatattta 50239376  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    | |  ||||||||| || ||||||| ||| || |||||||| |||||| |||||||||||||| |||||||    
T  50239377 ttgatatttatattttaaaaaatatcatttcataagaaaaaagcatcatttcattgtttataaaaatcata 50239447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 25702435 - 25702601
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttattt 164  Q
    |||||||||||||||  | || ||||||||| ||||||||||||  |||||||||| ||||||||  ||||||||  |||| |||||||||||  |||||    
T  25702435 gggaacttctacggtacactcataaattgaggtgtaccggtactcttgcttcataattttataaatcaacgatcattttttgtaaaataaataactattt 25702534  T
Q  165 gtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaat 231  Q
    |||  |||||||||| || | || || ||| || ||||||||  ||||| |||||| |||||||||||    
T  25702535 gtcaacatttatattttatagaacatcatttcataagaaaaa-acatcatttcattatttataagaat 25702601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 34038163 - 34038262
Alignment:
Q  68 gaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttatttgt 166  Q
    |||||||||||||  | ||  ||| |||| |||||||||||| ||||||||||| |||||||| |||||||||  |||||| ||||||||||||||||||    
T  34038163 gaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgaaataaatagttatttgt 34038262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 35873936 - 35874015
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt 145  Q
    |||||||||||||||  | ||  ||| ||||||||||||||||||||||||||||| |||||||| ||||||||| ||||    
T  35873936 gggaacttctacggtacactcacaaagtgagatgtaccggtacttctgcttcataattttataaattaacgatcattttt 35874015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 41541501 - 41541579
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||||| ||||||||||||  |||||||||||||||| || ||||||||| |||||| ||||||| || ||||||||    
T  41541501 aaattgaggtgtaccggtactcttgcttcataaatttatgaattaacgatcatttttatgaaataaagagctatttgtc 41541579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 88 - 189
Target Start/End: Original strand, 24677576 - 24677675
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| ||||||| || |||||||||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  24677576 taaattgaggtgtaccgata-ttctgcttcataaatttataaattaatgatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 24677673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 21883196 - 21883041
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttata--aaataaatagtt-atttgtcggcatttatattataga 184  Q
    ||||||||| ||||||||||||  | |||||||| |||||||| ||||||| | |||| ||  ||||||||| || ||||||    ||||||||| || |    
T  21883196 taaattgaggtgtaccggtactcttacttcataattttataaattaacgattatttttttatgaaataaataatttatttgttaatatttatattttata 21883097  T
Q  185 aaatatgattccagaagaaaaacgcatcatt-cattgtttataagaatcatagtaa 239  Q
     || |||||| || ||||||||  ||||||| ||||||||||||||||||||||||    
T  21883096 gaacatgatttcataagaaaaaaacatcatttcattgtttataagaatcatagtaa 21883041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 31401642 - 31401588
Alignment:
Q  185 aaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    ||||||||||  | ||||||||| |||||||||||||||||||||||||||||||    
T  31401642 aaatatgattttataagaaaaacacatcattcattgtttataagaatcatagtaa 31401588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 42275362 - 42275436
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttatttgt 166  Q
    |||| ||||||||||||  |||||||||| |||||||| |||||||||  |||||| ||||||||||||||||||    
T  42275362 tgaggtgtaccggtactcatgcttcataattttataaattaacgatcattttttatgaaataaatagttatttgt 42275436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 17644414 - 17644559
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaat 188  Q
    ||||||||||||| |||||||  |  ||||||||| |||||| |||||||||  || ||||||||||||||||||||||   | ||||||| |||||||     
T  17644414 aaattgagatgtatcggtactcttatttcataaatatataaattaacgatca--ttcataaaataaatagttatttgtcaata-ttatattttagaaaac 17644510  T
Q  189 atgattccagaag-aaaaacgcatc-attcattgtttataagaatcata 235  Q
    || ||| || ||| |||||  | || |||||||||||||||||||||||    
T  17644511 atcatttcataagaaaaaaaacgtcaattcattgtttataagaatcata 17644559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 187
Target Start/End: Complemental strand, 46918760 - 46918669
Alignment:
Q  94 gagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||| ||||||| |||| || || ||||||||   ||||||||| |||||||    
T  46918760 gagatgtaccggtactcttgcttcataaatttataaattaacgatc-attttatgaaat-aagagctatttgtcaatatttatattttagaaaa 46918669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 48481201 - 48481093
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| ||||||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||| |||||    
T  48481201 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 48481103  T
Q  219 tgtttataag 228  Q
    ||||||||||    
T  48481102 tgtttataag 48481093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 239
Target Start/End: Complemental strand, 52180637 - 52180465
Alignment:
Q  68 gaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttatttgt 166  Q
    ||||||||| ||| || ||  ||| |||| |||||||||||| ||||||||||| |||||||| ||||||| |  ||||||  ||||||||| |||||||    
T  52180637 gaacttctatggtatactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgataattttttatgtaataaatagctatttgt 52180538  T
Q  167 cggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    |   ||||||||| || | || || ||  || ||||||||  ||||| |||||||||||||||||| |||||||    
T  52180537 caaaatttatattttatagaacatcatctcataagaaaaa-acatcatttcattgtttataagaattatagtaa 52180465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 187
Target Start/End: Complemental strand, 17203130 - 17203034
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| ||||||| |||||  |||||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  17203130 taaattgaggtgtaccgatactt--gcttcataaatttataaattaatgatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 17203034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 86 - 190
Target Start/End: Complemental strand, 23304793 - 23304690
Alignment:
Q  86 cgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaa 185  Q
    |||||||| |||||||||||||||  | ||||| ||||||||||| |||| || | |||||| ||||||| || ||||||| |  ||||||||| |||||    
T  23304793 cgtaaattaagatgtaccggtactcttacttcaaaaatttataaattaactattatttttatgaaataaa-agctatttgttgatatttatattttagaa 23304695  T
Q  186 aatat 190  Q
    |||||    
T  23304694 aatat 23304690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 187
Target Start/End: Original strand, 49982450 - 49982577
Alignment:
Q  60 taaaaggggaacttctacggtgtaa-tcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatag 158  Q
    ||||| |||||||||||||||  |  || ||||||||| ||||||| |||| |||||  ||||||||||||| |||| ||| ||||||| |||||| |||    
T  49982450 taaaaagggaacttctacggtacacctcataaattgaggtgtaccgatactcctgctatataaatttataaattaacaatc-attttatgaaataagtag 49982548  T
Q  159 ttatttgtcggcatttatattatagaaaa 187  Q
     ||||||||   ||||||||| |||||||    
T  49982549 ctatttgtcaatatttatattttagaaaa 49982577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 105 - 239
Target Start/End: Original strand, 52441116 - 52441251
Alignment:
Q  105 gtacttctgcttcataaatttataaactaacgatcaatttt-ataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaa 203  Q
    |||||| |||||||||| |||||||| ||||||||| |||| ||  ||||||||||||||||||   ||||||||| || | || || ||| || |||||    
T  52441116 gtacttttgcttcataattttataaattaacgatcattttttatgtaataaatagttatttgtcaatatttatattttatagaacatcatttcataagaa 52441215  T
Q  204 aaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    |||   |||| |||||||||||||||||| |||||||    
T  52441216 aaa-atatcatttcattgtttataagaattatagtaa 52441251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 235
Target Start/End: Original strand, 9222886 - 9223024
Alignment:
Q  98 tgtaccggtacttctgcttcataaa-tttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattcc 196  Q
    ||||||||||||  || |||||||| |||||||| ||||||| | ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| |    
T  9222886 tgtaccggtactcttgtttcataaaatttataaattaacgattactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttc 9222985  T
Q  197 agaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    | ||||||||| ||||| |||||| |||||||| ||||||    
T  9222986 ataagaaaaac-catcatttcattctttataaggatcata 9223024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 9588050 - 9587880
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttattt 164  Q
    |||||||||||||||  | || |||| |||| | |||||||||| ||||||||||| |||||||| ||| ||| |  |||||| |||||||||| |||||    
T  9588050 gggaacttctacggtacactcataaagtgaggtataccggtactcctgcttcataattttataaattaatgattatcttttatgaaataaatagctattt 9587951  T
Q  165 gtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    ||    ||||||||| || | || || ||| || |||| |||  ||||| ||||||||||||||||||||||    
T  9587950 gttaatatttatattttacagaacatcatttcataagagaaa-acatcatttcattgtttataagaatcata 9587880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 239
Target Start/End: Original strand, 12105160 - 12105334
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttattt 164  Q
    |||||||||||||||  | ||  ||| |||| ||||||||||||  |||||||||| |||||||| ||||||| |  ||||||  |||||||||||||||    
T  12105160 gggaacttctacggtacactcacaaaatgaggtgtaccggtactcttgcttcataattttataaattaacgataattttttatgtaataaatagttattt 12105259  T
Q  165 gtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    |||   ||||||||| || | || || |||  |  |||||||  ||||| |||||||||||||||||| |||||||    
T  12105260 gtcaatatttatattttatagaacatcattttatcagaaaaa-acatcatttcattgtttataagaattatagtaa 12105334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 32912235 - 32912380
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaat 188  Q
    |||||||| |||| |||||||    ||||||||||||||||| |||||||| ||||||  |||||||||| ||||||||  || ||||||| |||||||     
T  32912235 aaattgaggtgtatcggtactctcacttcataaatttataaattaacgatc-attttaagaaataaatagctatttgtcaaca-ttatattttagaaaac 32912332  T
Q  189 atgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    || ||| || ||| ||||  | ||| |||||| |||||||||||||||    
T  32912333 atcatttcataaggaaaaaacgtcatttcattatttataagaatcata 32912380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 52345599 - 52345765
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttattt 164  Q
    |||||||||||||||  | ||  ||| |||| ||||||||||||  || ||||||| |||||||| |||||||||  |||| | |||||||||  |||||    
T  52345599 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcttgtttcataattttataaattaacgatcattttttgtgaaataaataactattt 52345698  T
Q  165 gtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaat 231  Q
     ||  |||||||||| || | ||||| ||| || ||||||||  ||||| ||||||||||||||||||    
T  52345699 atcaacatttatattttatagaatatcatttcataagaaaaa-acatcatttcattgtttataagaat 52345765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 18992702 - 18992632
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatat 190  Q
    ||||||||||| |||| |||| |||||||||||||  |||||||||  || ||||||||| ||||||||||    
T  18992702 aaatttataaattaactatcatttttataaaataaggagttatttgctggtatttatattttagaaaatat 18992632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 233
Target Start/End: Complemental strand, 29171517 - 29171404
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| ||||||||| ||| || ||||||| || |||||||    ||||||||| ||||||| || ||| || ||||||||| ||||| |||||    
T  29171517 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgttaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 29171419  T
Q  219 tgtttataagaatca 233  Q
    |||||||||| ||||    
T  29171418 tgtttataaggatca 29171404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 34410974 - 34411070
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| ||||||| |||| || ||||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  34410974 aaattgaggtgtaccgatact-ctacttcataaatttataaattaatgatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 34411070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 35910569 - 35910399
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||||||||||||||  |  |||||||| |  |||| ||||||| || ||||| |||| | |||| |||| || | ||||||| |||||| |||||||||    
T  35910569 gggaacttctacggtacacccgtaaattaaagtgtatcggtactcctacttcaaaaatctttaaattaactattatttttatagaataaagagttatttg 35910470  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    | |  ||||||||| |||||||| | |||  | ||||||||  | ||| |||||||||||||| |||||||    
T  35910469 ttgatatttatattttagaaaatgtcattttataagaaaaaaacgtcatttcattgtttataaaaatcata 35910399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 39084734 - 39084830
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| |||| || |||| |||||||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  39084734 aaattgaggtgtatcgatact-ctgcttcataaatttataaattaatgatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 39084830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 47458910 - 47458814
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| ||||||| |||| |||||||||||||||||||| |||  ||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  47458910 aaattgaggtgtaccgatact-ctgcttcataaatttataaattaataatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 47458814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 233
Target Start/End: Original strand, 50502399 - 50502512
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| ||||||||| ||| |||||||||| || | |||||    ||||||||| ||||||| || ||| || ||||||||| ||||| |||||    
T  50502399 aaatttataaattaacgatcactttaataaaataaaaaggtgtttgttaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 50502497  T
Q  219 tgtttataagaatca 233  Q
    |||||||||| ||||    
T  50502498 tgtttataaggatca 50502512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 20487564 - 20487737
Alignment:
Q  60 taaaaggggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagt 159  Q
    ||||| ||||||||||||||| || | |||||||||  || ||| |||||| | |||| |||||  ||||| ||| ||  | |||||| ||||||| |||    
T  20487564 taaaatgggaacttctacggtatagttgtaaattgaagtgcacc-gtactttttcttcctaaatcaataaattaatgaatatttttatgaaataaagagt 20487662  T
Q  160 tatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    ||||||| |  ||||||||| ||||||  || ||| || ||||||||  ||||| ||||||||||| ||||||||||    
T  20487663 tatttgttgatatttatattttagaaaccattatttcataagaaaaa--catcatttcattgtttaaaagaatcata 20487737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 38862515 - 38862447
Alignment:
Q  118 ataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||||||| ||||||||| |||||| ||||||| |||||||||||   ||||||||| |||||||    
T  38862515 ataaatttataaattaacgatca-ttttatgaaataaaaagttatttgtcaatatttatattttagaaaa 38862447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 145
Target Start/End: Complemental strand, 46641929 - 46641844
Alignment:
Q  60 taaaaggggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt 145  Q
    ||||| |||||||||||||||  | ||| ||| |||| |||||||||||| ||||||| ||| ||||||||  |||||||| ||||    
T  46641929 taaaatgggaacttctacggtacactcgcaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacgatcattttt 46641844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 3150240 - 3150355
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  3150240 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 3150338  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  3150339 tgtttataaggatcata 3150355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 7122329 - 7122261
Alignment:
Q  98 tgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgt 166  Q
    ||||||||||||  | ||||| ||||||||||| |||| |||| |||||| ||||||| ||||||||||    
T  7122329 tgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagttatttgt 7122261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 9259871 - 9259986
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||||||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||  ||||||| |||    
T  9259871 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaat-catcatttcat 9259969  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  9259970 tgtttataaggatcata 9259986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 17376707 - 17376592
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||||||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || |||||||||  |||||| |||    
T  17376707 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaaca-atcatttcat 17376609  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  17376608 tgtttataaggatcata 17376592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 235
Target Start/End: Original strand, 33771705 - 33771816
Alignment:
Q  124 ttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtt 222  Q
    ||||||| ||||||||| |||||| ||||||| |||||||||||   ||||||||| |||||||  | ||  || ||||||||  ||||| |||||||||    
T  33771705 ttataaattaacgatcatttttatgaaataaaaagttatttgtcaatatttatattttagaaaacgtcatatcataagaaaaa-acatcatttcattgtt 33771803  T
Q  223 tataagaatcata 235  Q
    |||||| ||||||    
T  33771804 tataaggatcata 33771816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 37765308 - 37765423
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  37765308 aaatatataaattaaagatcattttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 37765406  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  37765407 tgtttataaggatcata 37765423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 41321357 - 41321242
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||||||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||  ||||||| |||    
T  41321357 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaat-catcatttcat 41321259  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  41321258 tgtttataaggatcata 41321242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 43224700 - 43224815
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  43224700 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 43224798  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  43224799 tgtttataaggatcata 43224815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 51004814 - 51004960
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaact-aacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| |||||||||||| || ||||| ||||||||||  | ||||||  ||||||||||||||| |||||||| |    ||||||||| || ||||    
T  51004814 aaattgaggtgtaccggtactcctacttcaaaaatttataatttaaacgat-tattttataaaataaagagttatttataaatatttatattttataaaa 51004912  T
Q  188 tatgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
     || |||  | ||||||||  ||||| ||||||||||||||||||||||    
T  51004913 catcattttataagaaaaa-acatcatttcattgtttataagaatcata 51004960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 145
Target Start/End: Complemental strand, 51056599 - 51056523
Alignment:
Q  69 aacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt 145  Q
    ||||||||||||  ||||  ||| ||||||||||||||||| ||||||||||| |  ||||| ||||||||| ||||    
T  51056599 aacttctacggtacaatcacaaagtgagatgtaccggtactcctgcttcataattaaataaattaacgatcattttt 51056523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 235
Target Start/End: Original strand, 632683 - 632818
Alignment:
Q  101 accggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaa 200  Q
    |||| ||||||| ||||| ||| || |||| |||| || | ||||||  |||||| |||||||||| |  ||||||||| |||||||| | ||| || ||    
T  632683 accgatacttctacttcaaaaaattttaaattaactattatttttatggaataaagagttatttgttgatatttatattttagaaaatgtcatttcataa 632782  T
Q  201 gaaaaacgcatcatt-cattgtttataagaatcata 235  Q
    ||||||  | ||||| |||||||||||| |||||||    
T  632783 gaaaaaaacgtcatttcattgtttataaaaatcata 632818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 239
Target Start/End: Original strand, 24230569 - 24230743
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttattt 164  Q
    |||||||||||||||  | ||  ||| |||| ||||  |||||| ||||||||||| |||||||| ||||||| |  ||||||  ||||||||| |||||    
T  24230569 gggaacttctacggtacactcacaaagtgaggtgtaatggtactcctgcttcataattttataaattaacgataattttttatgtaataaatagctattt 24230668  T
Q  165 gtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    |||   ||||||||| || | || || ||  || ||||||||  ||||| |||||||||||||||||| |||||||    
T  24230669 gtcaaaatttatattttatagaacatcatctcataagaaaaa-acatcatttcattgtttataagaattatagtaa 24230743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 29953725 - 29953796
Alignment:
Q  119 taaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatat 190  Q
    |||||||||||| ||||||||  |||||||||||||| |  | ||| ||| |||||||||| ||||||||||    
T  29953725 taaatttataaattaacgatcgtttttataaaataaagaactctttatcgacatttatattttagaaaatat 29953796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 33234113 - 33234176
Alignment:
Q  124 ttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||| ||||||||| |||||| ||||||| |||||||||||   ||||||||| |||||||    
T  33234113 ttataaattaacgatcatttttatgaaataaaaagttatttgtcaatatttatattttagaaaa 33234176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 164
Target Start/End: Complemental strand, 40054970 - 40054896
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttattt 164  Q
    |||||||| |||||||||||| |||||||| | ||||| ||  |||||||  ||||||||||||||| ||||||||    
T  40054970 aaattgaggtgtaccggtactcctgcttcaaatatttacaatttaacgat-tattttataaaataaagagttattt 40054896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 187
Target Start/End: Original strand, 40868157 - 40868254
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| ||||||| |||| |||||||||||||||||||| ||| |||| ||||| | |||||| | ||||||| ||   ||||||||| |||||||    
T  40868157 taaattgaggtgtaccgatact-ctgcttcataaatttataaattaatgatc-attttttgaaataagttgttatttatcattatttatattttagaaaa 40868254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 231
Target Start/End: Complemental strand, 41568826 - 41568685
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaat 188  Q
    ||||| || ||||||| |||| |||||| ||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||     
T  41568826 aaatttaggtgtaccgatact-ctgctttataaatttataaattaatgatc-attttatgaaataagttgttatttgtcattatttatattttagaaaac 41568729  T
Q  189 atgattccagaagaaaaacgcatca-ttcattgtttataagaat 231  Q
    |  ||  || ||||||||  ||||| ||||||||||||| ||||    
T  41568728 accatctcataagaaaaaaacatcatttcattgtttatatgaat 41568685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 208 - 239
Target Start/End: Original strand, 42958966 - 42958997
Alignment:
Q  208 gcatcattcattgtttataagaatcatagtaa 239  Q
    ||||||||||||||||||||||||||||||||    
T  42958966 gcatcattcattgtttataagaatcatagtaa 42958997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 49739478 - 49739415
Alignment:
Q  124 ttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||| ||||||||| |||||||||||||| | |||||||||   ||||||||| |||||||    
T  49739478 ttataaattaacgatcatttttataaaataaaaatttatttgtcaatatttatattttagaaaa 49739415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 225
Target Start/End: Original strand, 1658604 - 1658709
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| |||||| || ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||| |||||    
T  1658604 aaatttataaattaacgaacactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacattatttcataagaaaaac-catcatttcat 1658702  T
Q  219 tgtttat 225  Q
    |||||||    
T  1658703 tgtttat 1658709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 5957280 - 5957356
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||||| ||||||| |||| |||||||||||||||||||| ||| || | ||||||| |||||| | ||||||||||    
T  5957280 aaattgaggtgtaccgatact-ctgcttcataaatttataaattaaaga-ccattttatgaaataagttgttatttgtc 5957356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 35533897 - 35533993
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||| || ||||||| |||| |||||| ||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  35533897 aaatttaggtgtaccgatact-ctgctttataaatttataaattaatgatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 35533993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 51873298 - 51873394
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| ||||| | |||| |||||||||||||||||||| ||| |||| ||||||| | |||| | ||||||||||   ||||||||| |||||||    
T  51873298 aaattgaggtgtacagatact-ctgcttcataaatttataaattaatgatc-attttatgagataagttgttatttgtcattatttatattttagaaaa 51873394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 6329270 - 6329422
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt-ataaaataaatagttatttgtcggcatttatattatagaaa 186  Q
    |||| |||| ||||||||| ||  | || ||||| |||||||| ||||||||| |||| ||  ||||||||| ||||||||   ||||||||| || | |    
T  6329270 taaagtgagttgtaccggtgctcttactccataattttataaattaacgatcattttttatgtaataaatagctatttgtcaatatttatattttataga 6329369  T
Q  187 atatgattccagaagaaaaacgcatcattc-attgtttataagaatcatagtaa 239  Q
    | || ||| || ||||||||  |||||||  |||||||||||||||||||||||    
T  6329370 acatcatttcataagaaaaaa-catcattttattgtttataagaatcatagtaa 6329422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 22821600 - 22821492
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| ||||||| | |||||| ||||||| | |||||||||   ||||||||| || |||| || ||| || |||||||| | |||| |||||    
T  22821600 aaatttataaattaacgattatttttatgaaataaaaaattatttgtcaatatttatattttaaaaaacatcatttcataagaaaaaag-atcatttcat 22821502  T
Q  219 tgtttataag 228  Q
    ||||||||||    
T  22821501 tgtttataag 22821492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 29852249 - 29852302
Alignment:
Q  126 ataaactaacgatcaattttataaaataaatagttatttgtcggcatttatatt 179  Q
    ||||| |||| |||| |||||| |||||||||||||||||||| | ||||||||    
T  29852249 ataaattaacaatcatttttatgaaataaatagttatttgtcgacttttatatt 29852302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 32144895 - 32144862
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  32144895 ttatcgctcataatagagaactttgattatttta 32144862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 33986226 - 33986178
Alignment:
Q  118 ataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    ||||||||||||| |||||||| ||||||| |||||||||| ||||||||    
T  33986226 ataaatttataaattaacgatc-attttatgaaataaatagctatttgtc 33986178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 34100940 - 34100907
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  34100940 ttatcgctcataatagagaactttgattatttta 34100907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Original strand, 45809621 - 45809654
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  45809621 ttatcgctcataatagagaactttgattatttta 45809654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 187
Target Start/End: Complemental strand, 46283135 - 46283059
Alignment:
Q  110 tctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||| ||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  46283135 tctgctttataaatttataaattaatgatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 46283059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Original strand, 48796208 - 48796241
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  48796208 ttatcgctcataatagagaactttgattatttta 48796241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 51610765 - 51610732
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  51610765 ttatcgctcataatagagaactttgattatttta 51610732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 235
Target Start/End: Original strand, 51977859 - 51978027
Alignment:
Q  67 ggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgt 166  Q
    ||||||||||||||  |  || ||||| || |||||||||||| || ||||| |||| | |||| |||| || | ||||||  |||||| ||||||||||    
T  51977859 ggaacttctacggtacacccgcaaattaaggtgtaccggtactcctacttcaaaaatctttaaattaactattatttttatggaataaagagttatttgt 51977958  T
Q  167 cggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
     |   |||||||| ||| |||| | ||| || ||||||||  ||||| |||||||||||||| |||||||    
T  51977959 tgatgtttatattttaggaaatgtcatttcataagaaaaa-acatcatttcattgtttataacaatcata 51978027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 10061509 - 10061394
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   || |||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  10061509 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatgtatattttagaaaacatcatttcataagaaaaac-catcatttcat 10061411  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  10061410 tgtttataaggatcata 10061394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 11444293 - 11444440
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||| ||||||||||||||  ||  |||||||||  ||||  ||| ||| | ||||||  ||||||||| ||||||| | | |||||||| |||||||    
T  11444293 taaattaagatgtaccggtacacctatttcataaatcaataagttaatgattatttttatgtaataaatagatatttgttgacttttatattttagaaaa 11444392  T
Q  188 tatgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    ||| |||  | ||||||||  ||||| |||||| ||| |||||||||||    
T  11444393 tattattttataagaaaaa-acatcatttcattctttttaagaatcata 11444440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 24247857 - 24247972
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||||||||| ||| || ||||||| || ||||||||   ||||||||| || |||| || ||| || ||||||||  ||||||| |||    
T  24247857 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttataaaacatcatttcataagaaaaat-catcatttcat 24247955  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  24247956 tgtttataaggatcata 24247972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 285
Target Start/End: Complemental strand, 25081984 - 25081952
Alignment:
Q  253 tatcgctcataataaagaactttgattatttta 285  Q
    |||||||||||||||| ||||||||||||||||    
T  25081984 tatcgctcataataaataactttgattatttta 25081952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 27038895 - 27038780
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| |  ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  27038895 aaatatataaattaaagatcactttaatgaaataaaaaagtatttgtcactatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 27038797  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  27038796 tgtttataaggatcata 27038780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 31571026 - 31571141
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| |||||||| | ||| || ||||||||  ||||||| |||    
T  31571026 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaatgtcatttcataagaaaaat-catcatttcat 31571124  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  31571125 tgtttataaggatcata 31571141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 33828919 - 33829034
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || || |||||| ||||||| |||    
T  33828919 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataaaaaaaac-catcatttcat 33829017  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  33829018 tgtttataaggatcata 33829034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 33839047 - 33838932
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || || |||||| ||||||| |||    
T  33839047 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataaaaaaaac-catcatttcat 33838949  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  33838948 tgtttataaggatcata 33838932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 235
Target Start/End: Complemental strand, 42647780 - 42647633
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||| || |||||||||||  ||| |||||||||  ||||  |||  |||| ||||||  || ||| || || |||||| | |||||||| |||||||    
T  42647780 taaattaaggtgtaccggtacacctgtttcataaatcaataagttaaatatcatttttatgtaacaaagagctacttgtcgacttttatattttagaaaa 42647681  T
Q  188 tatgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    ||| ||| || ||||||||  ||| | ||||||||||||||||||||||    
T  42647680 tattatttcataagaaaaa-acataatttcattgtttataagaatcata 42647633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 44264036 - 44263984
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt 145  Q
    |||| |||||||||||| ||| ||||||| |||||||| ||||||||| ||||    
T  44264036 tgaggtgtaccggtactcctgtttcataattttataaattaacgatcattttt 44263984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 48976902 - 48976954
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt 145  Q
    |||| |||| ||||||| ||||||||||| |||||||| ||||||||| ||||    
T  48976902 tgaggtgtatcggtactcctgcttcataattttataaattaacgatcattttt 48976954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 49289284 - 49289399
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| |  ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  49289284 aaatatataaattaaagatcactttaatgaaataaaaaagtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 49289382  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  49289383 tgtttataaggatcata 49289399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 51184397 - 51184345
Alignment:
Q  114 cttcataaatttataaactaacgatcaattttataaaataaatagttatttgt 166  Q
    ||||| ||||||||||| |||| |||| |||||| ||||||| ||||||||||    
T  51184397 cttcaaaaatttataaattaactatcatttttatgaaataaaaagttatttgt 51184345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 152 - 235
Target Start/End: Complemental strand, 52261133 - 52261049
Alignment:
Q  152 taaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cattgtttataagaatcata 235  Q
    |||| |||||||||| |  ||||||||| |||||||| | ||| || ||||||||  ||||||| |||||||||||| |||||||    
T  52261133 taaagagttatttgttgatatttatattttagaaaatgtcatttcataagaaaaaaacatcatttcattgtttataaaaatcata 52261049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 52861324 - 52861376
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt 145  Q
    |||| |||||||||||||||||||| ||| ||||||||  |||||||| ||||    
T  52861324 tgaggtgtaccggtacttctgcttcttaattttataaatgaacgatcattttt 52861376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 1e-62; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 66 - 239
Target Start/End: Original strand, 43631055 - 43631228
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    ||||||||||| |||  | ||||| |||||| ||||||||||||  |||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  43631055 gggaacttctatggtacactcgtagattgaggtgtaccggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttg 43631154  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    ||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43631155 tcgacatttatattttagaaaatatgatttcagaagaaaaacgcatcattcattgtttataagaatcatagtaa 43631228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 85 - 239
Target Start/End: Original strand, 16086965 - 16087119
Alignment:
Q  85 tcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattataga 184  Q
    ||||| |||||| ||||||||||||  |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||    
T  16086965 tcgtagattgaggtgtaccggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttgtcgacatttatattttaga 16087064  T
Q  185 aaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16087065 aaatatgatttcagaagaaaaacgcatcattcattgtttataagaatcatagtaa 16087119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 41742963 - 41742813
Alignment:
Q  85 tcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattataga 184  Q
    ||||| |||||||||||||| ||||  || ||||||||| |||||| |||||||||||||||| ||||||||||||||||||| ||||||||||| ||||    
T  41742963 tcgtacattgagatgtaccgatactcttgtttcataaatctataaattaacgatcaattttatgaaataaatagttatttgtctgcatttatattttaga 41742864  T
Q  185 aaatatgattccagaagaaaaacgcatcattcattgtttataagaatcata 235  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  41742863 aaatgtgatttcagaagaaaaacgcatcattcattgtttataagaatcata 41742813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 85 - 235
Target Start/End: Complemental strand, 29682426 - 29682276
Alignment:
Q  85 tcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattataga 184  Q
    |||||||||||| || ||| |||||  ||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||  | |    
T  29682426 tcgtaaattgaggtgcaccagtactcttgcatcataaatctataaactaacgatcaattttatgaaataaatagttatttgtcggcatttatatttaaaa 29682327  T
Q  185 aaatatgattccagaagaaaaacgcatcattcattgtttataagaatcata 235  Q
    |||||||||| | |||||||||| ||| |||||||||||||||||||||||    
T  29682326 aaatatgatttctgaagaaaaacacataattcattgtttataagaatcata 29682276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 60 - 237
Target Start/End: Complemental strand, 23561523 - 23561340
Alignment:
Q  60 taaaaggggaacttctacggtgtaatcgtaaattgagatgtaccggtac------ttctgcttcataaatttataaactaacgatcaattttataaaata 153  Q
    ||||||||||||||||| |||  | |||||||||||| |||||||||||      |  |||||||||||| |||||| |||||||||||||||| |||||    
T  23561523 taaaaggggaacttctatggtacactcgtaaattgaggtgtaccggtaccggtactcgtgcttcataaatctataaattaacgatcaattttatgaaata 23561424  T
Q  154 aatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagt 237  Q
    ||||||||||||| |||||| ||||| |||||||||| ||| || |||||||||  ||||||||||||||||||||||||||||    
T  23561423 aatagttatttgtaggcattgatattttagaaaatatcatttcataagaaaaacatatcattcattgtttataagaatcatagt 23561340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 126 - 239
Target Start/End: Complemental strand, 17020375 - 17020262
Alignment:
Q  126 ataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttat 225  Q
    ||||| |||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||| | |||||||||| |||||||||||||||||    
T  17020375 ataaattaacgatcaattttattaagtaaatagttatttgtcggcatttatattttagaaaatatgatttctgaagaaaaacacatcattcattgtttat 17020276  T
Q  226 aagaatcatagtaa 239  Q
    |||||| |||||||    
T  17020275 aagaatgatagtaa 17020262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 239
Target Start/End: Complemental strand, 2291186 - 2291013
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||| ||||||||||  | ||||||| |||| ||||||||||||  | | ||  ||||||||||| ||| |||||||||||| |||||||||||||||||    
T  2291186 gggagcttctacggtacactcgtaaaatgaggtgtaccggtactctttcatcccaaatttataaattaatgatcaattttatgaaataaatagttatttg 2291087  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    |||| ||||||||| |||||||||| ||| || ||||||||  ||| | |||||||||||||||||||||||||    
T  2291086 tcggtatttatattttagaaaatattatttcataagaaaaatacattaatcattgtttataagaatcatagtaa 2291013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 63 - 239
Target Start/End: Original strand, 15584538 - 15584714
Alignment:
Q  63 aaggggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttat 162  Q
    |||||||||||||||||   | |||||||||    ||||||||||||  || ||| ||||| |||||| |||||||||||||||||||| ||||||||||    
T  15584538 aaggggaacttctacggcacactcgtaaattacagtgtaccggtactcttgtttcctaaatctataaattaacgatcaattttataaaacaaatagttat 15584637  T
Q  163 ttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    || |||||||||||||| |||||||||| ||| || |||||||||   ||||  |||||||||||||||||||||||    
T  15584638 ttatcggcatttatattttagaaaatataatttcataagaaaaacaagtcatctattgtttataagaatcatagtaa 15584714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 15591791 - 15591622
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||||||| ||||||  | || |||||| || |||||||||||||||||||| |||||||||  | |||| ||||||||||| ||||||| |||||||||    
T  15591791 gggaacttttacggtacattcataaattaaggtgtaccggtacttctgcttcctaaatttatgcattaacaatcaattttatgaaataaaaagttatttg 15591692  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcata 235  Q
    ||| ||||| |||   ||||||||| ||| || ||||||||| ||||||||||||||||||||| |||||    
T  15591691 tcgacatttttatctcagaaaatatcatttcataagaaaaacacatcattcattgtttataagagtcata 15591622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 47258702 - 47258845
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| | ||||| ||||| || ||  ||| | |||||| |||||||||||||||||||||||||| |||||| | |||||||||||| || ||||    
T  47258702 taaattgaggtttaccgttacttttgttttctaagtctataaattaacgatcaattttataaaataaatatttatttattggcatttatattttaaaaaa 47258801  T
Q  188 tatgattccagaagaaaaacgcatcattcattgtttataagaat 231  Q
    ||| ||| || ||||||||| | |||||||||||||||||||||    
T  47258802 tatcatttcataagaaaaacacgtcattcattgtttataagaat 47258845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 227
Target Start/End: Original strand, 30936094 - 30936256
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||||||||||||||  |  || ||||| || ||||||||||||  | ||||| ||||||||||| |||| ||||||||||| ||||||| || ||||||    
T  30936094 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcaattttatgaaataaaaagctatttg 30936193  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataa 227  Q
    | |  ||||||||| |||||||||| ||| || ||||||||  ||||| ||||||||||||||    
T  30936194 ttgatatttatattttagaaaatatcatttcataagaaaaaatcatcatttcattgtttataa 30936256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 30878646 - 30878549
Alignment:
Q  132 taacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaat 231  Q
    |||||||||||||||| ||||||||||||          ||||||||| || ||||||||||| || ||||||||| |||||||||||||||||||||||    
T  30878646 taacgatcaattttatgaaataaatagtt----------atttatattttaaaaaatatgatttcataagaaaaacacatcattcattgtttataagaat 30878557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 22904516 - 22904612
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| ||||||| |||| |||||||||||||||||||| ||| |||| ||||||| |||||||| ||||||||||   ||||||||| |||||||    
T  22904516 aaattgaggtgtaccgatact-ctgcttcataaatttataaattaatgatc-attttatgaaataaattgttatttgtcattatttatattttagaaaa 22904612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 86 - 235
Target Start/End: Complemental strand, 42975281 - 42975131
Alignment:
Q  86 cgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaa 185  Q
    |||||||| || ||||||| || || | ||||| ||||||||||| |||| || | |||||| ||||||| |  ||||||| |  ||||||||| |||||    
T  42975281 cgtaaattaaggtgtaccgatatttttacttcaaaaatttataaattaactattatttttatgaaataaaaaactatttgttgatatttatattttagaa 42975182  T
Q  186 aatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    ||||| ||| || ||||||||  ||||| |||||||||||||| |||||||    
T  42975181 aatatcatttcataagaaaaaaacatcatttcattgtttataaaaatcata 42975131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 22967431 - 22967586
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttata--aaataaatagtt-atttgtcggcatttatattataga 184  Q
    ||||||||| ||||||||||||  | |||||||| |||||||| ||||||| | |||| ||  ||||||||| || ||||||    ||||||||| || |    
T  22967431 taaattgaggtgtaccggtactcttacttcataattttataaattaacgattatttttttatgaaataaataatttatttgttaatatttatattttata 22967530  T
Q  185 aaatatgattccagaagaaaaacgcatcatt-cattgtttataagaatcatagtaa 239  Q
     || |||||| || ||||||||  ||||||| ||||||||||||||||||||||||    
T  22967531 gaacatgatttcataagaaaaaaacatcatttcattgtttataagaatcatagtaa 22967586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 167
Target Start/End: Original strand, 8577947 - 8578025
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    ||||||||| ||||||  ||||  | ||||||||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  8577947 taaattgaggtgtaccaatactcttacttcataaatttataaattaacgatc-attttataaaataaataggtatttgtc 8578025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 8770393 - 8770539
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaat 188  Q
    ||||| || ||||||| ||||  ||||||| |||| |||||| |||| |||| |||||| ||||||| |||| ||||| |  |||| |||| ||||||||    
T  8770393 aaattaaggtgtaccgatactcttgcttcaaaaatctataaattaactatcatttttatgaaataaagagttgtttgttgatatttgtattttagaaaat 8770492  T
Q  189 atgattccagaagaaaaacgcatcatt-cattgtttataagaatcata 235  Q
    || ||| || ||||||||  ||||||| |||||||||||| |||||||    
T  8770493 atcattacataagaaaaaa-catcatttcattgtttataaaaatcata 8770539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 45857498 - 45857644
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaat 188  Q
    ||||| || ||||||||||||  | ||||| ||||||||||| |||| || | |||||| ||||||| || ||||||| |  ||||||||| ||||||||    
T  45857498 aaattaaggtgtaccggtactcttacttcaaaaatttataaattaactattacttttatgaaataaaaagctatttgttgatatttatattttagaaaat 45857597  T
Q  189 atgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    || |||  | ||||||||  ||||| |||||||||||||| |||||||    
T  45857598 atcatttaataagaaaaa-acatcatttcattgtttataaaaatcata 45857644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 2932600 - 2932696
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| ||||||| |||| |||||||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  2932600 aaattgaggtgtaccgatact-ctgcttcataaatttataaattaatgatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 2932696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 3228626 - 3228530
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| ||||||| |||| |||||||||||||||||||| ||| |||  ||||||| |||||||| ||||||||||   ||||||||| |||||||    
T  3228626 aaattgaggtgtaccgatact-ctgcttcataaatttataaattaatgat-tattttatgaaataaatggttatttgtcattatttatattttagaaaa 3228530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 239
Target Start/End: Original strand, 44963855 - 44963996
Alignment:
Q  98 tgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattcca 197  Q
    ||||||||||||  | ||||| ||||||||||| |||| |||| |||||| ||||||| |||||||||| |  |||| |||| |||||||||| |||  |    
T  44963855 tgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagttatttgttgatatttgtattttagaaaatatcatttta 44963954  T
Q  198 gaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
     || |||||   |||| |||||||||||||| |||||||||||    
T  44963955 taa-aaaaatatatcatttcattgtttataaaaatcatagtaa 44963996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 231
Target Start/End: Complemental strand, 1343404 - 1343262
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||||||||||||||||| || || || ||||||||||  ||| |||  ||||||| ||||||| |||||||| |||  ||||||||| |||||||    
T  1343404 taaattgagatgtaccggtactcctactccaaaaatttataatttaaggat-tattttatgaaataaagagttatttatcgatatttatattttagaaaa 1343306  T
Q  188 tatgattccagaagaaaaacgcatca-ttcattgtttataagaat 231  Q
     || |||  | ||||||||  ||| | ||||||||||||||||||    
T  1343305 catcattttataagaaaaa-acattatttcattgtttataagaat 1343262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 15091020 - 15090905
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| ||||||||| ||| || ||||||| || |||||||    ||||||||| ||||||| || ||| || ||||||||| ||||| |||||    
T  15091020 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgttaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 15090922  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  15090921 tgtttataagtatcata 15090905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 239
Target Start/End: Original strand, 23406679 - 23406826
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttatttgtcggcatttatattatagaaaatatg 191  Q
    |||| |||||||||||| ||||||||||| |||||| | |||||||||  ||||||  ||||||||  ||||| ||   ||||||||| || |||| ||     
T  23406679 tgaggtgtaccggtactcctgcttcataattttatatattaacgatcattttttatgcaataaataactatttttcaatatttatattttataaaacatt 23406778  T
Q  192 attccagaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    ||| || ||||||||  ||||| |||||||||||||||||| |||||||    
T  23406779 atttcataagaaaaa-acatcatttcattgtttataagaattatagtaa 23406826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 42039654 - 42039539
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || |||||| ||||||||| ||||||| |||    
T  42039654 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcattccataagaaaaac-catcatttcat 42039556  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  42039555 tgtttataaggatcata 42039539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 235
Target Start/End: Complemental strand, 24505498 - 24505360
Alignment:
Q  98 tgtaccggtacttctgcttcataaatt-tataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattcc 196  Q
    ||||||||||||  || |||||||| | |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| |    
T  24505498 tgtaccggtactcttgtttcataaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttc 24505399  T
Q  197 agaagaaaaacgcatcatt-cattgtttataagaatcata 235  Q
    | ||||||||| ||||||| ||||||||||||| ||||||    
T  24505398 ataagaaaaac-catcatttcattgtttataaggatcata 24505360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 164
Target Start/End: Original strand, 26605056 - 26605155
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttattt 164  Q
    |||||||||||||||  | ||  ||| |||| ||||||||||||  |||||||||| |||||||| ||||||| |  ||||||| |||||||||||||||    
T  26605056 gggaacttctacggtacactcacaaaatgaggtgtaccggtactcttgcttcataattttataaattaacgataattttttatataataaatagttattt 26605155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 31743684 - 31743539
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaat 188  Q
    |||||| | |||||||||||| |||||||| ||||||||||  |||||||  ||||||| ||||||| |||||||| |    ||||||||| || ||||     
T  31743684 aaattgtggtgtaccggtactcctgcttcaaaaatttataatttaacgat-tattttatgaaataaagagttatttataaatatttatattttataaaac 31743586  T
Q  189 atgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    || |||  | ||||||||  ||||| ||||||||||||||||||||||    
T  31743585 atcattttataagaaaaa-acatcatttcattgtttataagaatcata 31743539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 239
Target Start/End: Original strand, 35291327 - 35291500
Alignment:
Q  67 ggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt-ataaaataaatagttatttg 165  Q
    ||||||||||||||  | ||  ||| |||| ||||||||||||  | |||||||| |||||||| ||||||| | |||| || |||||||||  |||||     
T  35291327 ggaacttctacggtacactcacaaaatgaggtgtaccggtactctttcttcataattttataaattaacgattattttttatgaaataaataactattta 35291426  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    ||   ||||||||| || | || || ||| || ||||||||  ||||| ||||||||||||||||||||||||||    
T  35291427 tcaatatttatattttatagaacataatttcataagaaaaaa-catcagttcattgtttataagaatcatagtaa 35291500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 42584144 - 42584047
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||  ||||||| |||| |||||||||||||||||||| ||| |||| ||||||| || ||| | ||||||||||   ||||||||| |||||||    
T  42584144 aaattgatgtgtaccgatactcctgcttcataaatttataaattaatgatc-attttatgaattaagttgttatttgtcaatatttatattttagaaaa 42584047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 2038150 - 2038258
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| ||||||||| ||| || ||||||| || ||||| ||   ||||||||| ||||||| || ||| || ||||||||| ||||| |||||    
T  2038150 aaatttataaattaacgatcactttaatgaaataaaaaggtatttatcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 2038248  T
Q  219 tgtttataag 228  Q
    ||||||||||    
T  2038249 tgtttataag 2038258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 239
Target Start/End: Complemental strand, 3214881 - 3214752
Alignment:
Q  112 tgcttcataaatttataaactaacgatcaatttt-ataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgca 210  Q
    |||||||||| |||||||| ||||||||| |||| ||  ||||||||| ||||||||   ||||||||| || | || || ||| || ||||||||   |    
T  3214881 tgcttcataattttataaattaacgatcattttttatgtaataaatagctatttgtcaatatttatattttatagaacattatttcataagaaaaaaata 3214782  T
Q  211 tcatt-cattgtttataagaatcatagtaa 239  Q
    ||||| |||||||||||||||| |||||||    
T  3214781 tcatttcattgtttataagaattatagtaa 3214752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 37118383 - 37118503
Alignment:
Q  115 ttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcat 214  Q
    |||||||||  ||||| ||||||||| ||||||  |||||| |  ||||| ||| | |||||||| |||||||||| ||| || ||||||||  ||||||    
T  37118383 ttcataaatcaataaattaacgatcatttttatgtaataaagaaatatttatcgacttttatattttagaaaatattatttcataagaaaaaa-catcat 37118481  T
Q  215 t-cattgtttataagaatcata 235  Q
    | |||| |||||||||||||||    
T  37118482 ttcattctttataagaatcata 37118503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 427860 - 428007
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||| ||||||| |||||| |||| |||||||||  ||||  ||| ||||  ||||||  || ||| |||||||||||| | ||||||||  ||| ||    
T  427860 taaattaagatgtatcggtacatctgtttcataaatcaataagttaaagatcctttttatgtaacaaagagttatttgtcgacttttatatttaagagaa 427959  T
Q  188 tatgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    ||| ||| || ||||||||  ||| | ||||||||||||||||||||||    
T  427960 tattatttcataagaaaaa-acataatttcattgtttataagaatcata 428007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 39444317 - 39444202
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||||||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||  ||||||| |||    
T  39444317 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaat-catcatttcat 39444219  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  39444218 tgtttataaggatcata 39444202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 187
Target Start/End: Original strand, 40331084 - 40331178
Alignment:
Q  91 attgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||| ||||||| |||| |||||||||||||||||||| ||| |||| ||||| |||||||| | ||||||| ||   ||||||||| |||||||    
T  40331084 attgaggtgtaccgatact-ctgcttcataaatttataaattaatgatc-attttttaaaataagttgttatttatcattatttatattttagaaaa 40331178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 190
Target Start/End: Complemental strand, 41809557 - 41809481
Alignment:
Q  114 cttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatat 190  Q
    ||||| |||| |||||| |||| ||||||||||| ||||||| | |||||||| |  ||||||||| ||||||||||    
T  41809557 cttcaaaaatctataaattaactatcaattttatgaaataaagaattatttgttgatatttatattttagaaaatat 41809481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 47220307 - 47220192
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  47220307 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 47220209  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  47220208 tgtttataaggatcata 47220192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 22639391 - 22639486
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| ||||||| |||||  |||||||||||||||||| |||  ||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  22639391 aaattgaggtgtaccgatactt--gcttcataaatttataaattaattatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 22639486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 187
Target Start/End: Complemental strand, 24149150 - 24149053
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| ||||||| |||| |||||| ||||||||||||| ||| |||  ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  24149150 taaattgaggtgtaccgatact-ctgctttataaatttataaattaatgat-tattttatgaaataagttgttatttgtcattatttatattttagaaaa 24149053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 235
Target Start/End: Original strand, 32529228 - 32529350
Alignment:
Q  114 cttcataaatttataaactaacgatcaatttt-ataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatc 212  Q
    |||||||| |||||||| ||||||||| |||| || |||||||||  ||||| ||   ||||||||| || | || || ||| || |||||||| |||||    
T  32529228 cttcataattttataaattaacgatcattttttatgaaataaataactatttatcaatatttatattttatagaacattatttcataagaaaaa-gcatc 32529326  T
Q  213 a-ttcattgtttataagaatcata 235  Q
    | ||||||||||||||||||||||    
T  32529327 agttcattgtttataagaatcata 32529350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 187
Target Start/End: Original strand, 45701054 - 45701151
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| ||||||| |||| |||||||||||||||||||| ||| |||| ||||| | |||||| | ||||||| ||   ||||||||| |||||||    
T  45701054 taaattgaggtgtaccgatact-ctgcttcataaatttataaattaatgatc-attttttgaaataagttgttatttatcattatttatattttagaaaa 45701151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 46911590 - 46911644
Alignment:
Q  112 tgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    ||||||||| ||||||||| ||| ||||| ||||||||||||||||| ||||||||    
T  46911590 tgcttcatatatttataaattaatgatca-ttttataaaataaatagctatttgtc 46911644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 15877458 - 15877340
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||| || |||||||||||  ||| |||||||||| ||||  ||||||||| ||||||  || ||| || ||||||| | | |||||||| || ||||    
T  15877458 taaattaaggtgtaccggtacacctgtttcataaattaataagttaacgatcatttttatgtaaaaaagagctatttgttgacttttatattttataaaa 15877359  T
Q  188 tatgattccagaagaaaaa 206  Q
    ||| ||| || ||||||||    
T  15877358 tattatttcataagaaaaa 15877340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 24204637 - 24204687
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgat 138  Q
    |||| |||||||||||||||||  ||||||||||||| ||||| |||||||    
T  24204637 taaaatgagatgtaccggtactcttgcttcataaattgataaattaacgat 24204687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 27897248 - 27897336
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatatt 179  Q
    |||||||| ||||||| |||| | |||| ||||||||||||| ||| |||| ||||||| |||||||| ||||||||| |  |||||||||    
T  27897248 aaattgaggtgtaccgatactcc-gctttataaatttataaattaatgatc-attttatgaaataaattgttatttgttgttatttatatt 27897336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 31311725 - 31311648
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||||| || |||||||||  |||| |||||||||||||| |||||||  ||||||| ||||||| || ||||||||    
T  31311725 aaattgaggtgcaccggtactcttgctccataaatttataaattaacgat-tattttatgaaataaaaagctatttgtc 31311648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 16087173 - 16087140
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  16087173 ttatcgctcataatagagaactttgattatttta 16087140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 19345995 - 19345939
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt 145  Q
    ||||||||| ||||||| |||| |||||||||||||||||||| ||| ||||| ||||    
T  19345995 taaattgaggtgtaccgatact-ctgcttcataaatttataaattaatgatcattttt 19345939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 35395179 - 35395111
Alignment:
Q  98 tgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    ||||||| ||||| |||| |||||| ||||||| ||||||| | |||||||||||||| | |||||||||    
T  35395179 tgtaccgatacttttgctccataaacttataaattaacgatta-ttttataaaataaaaaattatttgtc 35395111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 3062229 - 3062130
Alignment:
Q  136 gatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cattgtttataagaatcat 234  Q
    ||||| ||| || ||||||| || ||||||||   |||||||| |||||||| ||  || || ||||||||| ||||||| |||||||||||||||||||    
T  3062229 gatcactttaatgaaataaaaagatatttgtcaatatttatatcatagaaaacatcgtttcataagaaaaac-catcatttcattgtttataagaatcat 3062131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 9923422 - 9923307
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||  ||||||| |||    
T  9923422 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaat-catcatttcat 9923324  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  9923323 tgtttataaggatcata 9923307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 16200429 - 16200480
Alignment:
Q  112 tgcttcataaatttataaactaacgatcaattttataaaataaatagttattt 164  Q
    ||||| ||||||| ||||| ||||||||| |||||||||||||| ||||||||    
T  16200429 tgcttaataaattgataaattaacgatca-ttttataaaataaagagttattt 16200480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 235
Target Start/End: Original strand, 40379038 - 40379140
Alignment:
Q  132 taacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaa 230  Q
    ||||||||| |||||||||||||| |||||||| ||   ||||||||| |||||||||| |||  | |||||||||  |||| || ||| ||||||||||    
T  40379038 taacgatca-ttttataaaataaaaagttatttatcaatatttatattttagaaaatatcattttataagaaaaac-tatcattttattatttataagaa 40379135  T
Q  231 tcata 235  Q
    |||||    
T  40379136 tcata 40379140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 167
Target Start/End: Original strand, 46575101 - 46575204
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca--attttataaaataaatagttatt 163  Q
    |||||||||||||||  | ||  ||| |||| |||||||||||| ||||||| ||| ||||||||  ||||||||   |||| || | ||||||||||||    
T  46575101 gggaacttctacggtacattcacaaaatgaggtgtaccggtactcctgcttcttaattttataaatgaacgatcatttttttttatagtaaatagttatt 46575200  T
Q  164 tgtc 167  Q
    ||||    
T  46575201 tgtc 46575204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 5e-62; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 66 - 238
Target Start/End: Original strand, 30060530 - 30060702
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||||||||||||||  | |||||||||||| ||||||| ||||  |||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  30060530 gggaacttctacggtacactcgtaaattgaggtgtaccgatactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttg 30060629  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagta 238  Q
    |||||||||||||| |||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||    
T  30060630 tcggcatttatattttagaaaatatgatttcagaagaaaaactcatcgttcattgtttataagaatcatagta 30060702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 71 - 238
Target Start/End: Original strand, 33491606 - 33491773
Alignment:
Q  71 cttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggc 170  Q
    ||||||||||  | |||||||||||  ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  33491606 cttctacggtacactcgtaaattgaagtgtaccggtactcttgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttgtcggc 33491705  T
Q  171 atttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagta 238  Q
    ||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  33491706 atttatattttagaaaatatgatttcagaagaaaaatgcatcattcattgtttataagaatcatagta 33491773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 69 - 239
Target Start/End: Complemental strand, 408466 - 408296
Alignment:
Q  69 aacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcg 168  Q
    ||||||||||||  | |||||||||||| ||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  408466 aacttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcataaatctataaactaacgatcaattttattaaataaatagttatttgtcg 408367  T
Q  169 gcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    | ||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||    
T  408366 gaatttatattttagaaaatatgatttcagaagaaaaatgcatcgttcattgtttataagaatcatagtaa 408296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 66 - 239
Target Start/End: Complemental strand, 46663732 - 46663559
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||||||||||||||  | |||||||||||| ||||||||||||  |||||||||||| |||||| ||| |||||||||||| |||||||||||||||||    
T  46663732 gggaacttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcataaatctataaattaatgatcaattttatgaaataaatagttatttg 46663633  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    |||||||||||||| || ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  46663632 tcggcatttatattttaaaaaatatgatttccgaagaaaaacgcatcattcattgtttataagaatcatagtaa 46663559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 85 - 239
Target Start/End: Complemental strand, 51944815 - 51944661
Alignment:
Q  85 tcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattataga 184  Q
    |||||||||||| ||||  ||||||| ||||||||||||||||||| ||| |||||||||||| |||||||||||||||| |||||||||||||| || |    
T  51944815 tcgtaaattgaggtgtattggtacttttgcttcataaatttataaattaatgatcaattttatgaaataaatagttatttatcggcatttatattttaaa 51944716  T
Q  185 aaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  51944715 aaatatgatttccgaagaaaaacgcatcattcattgtttataagaatcatagtaa 51944661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 66 - 239
Target Start/End: Complemental strand, 37748833 - 37748660
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||||||||||||||  | | ||| |||||| | ||| ||||||  || ||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  37748833 gggaacttctacggtacactggtacattgaggtatactggtactcttgtttcataaatctataaactaacgatcaattttatgaaataaatagttatttg 37748734  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    |||||||||||||| || ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37748733 tcggcatttatattttaaaaaatgtgatttcagaagaaaaacgcatcattcattgtttataagaatcatagtaa 37748660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 115 - 238
Target Start/End: Original strand, 27736637 - 27736760
Alignment:
Q  115 ttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcat 214  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||| |    
T  27736637 ttcataaatctataaactaacgatcaattttatgaaataaatagttatttgtcggcatttatattttagaaaatatgatttcagaagaaaaacacatcgt 27736736  T
Q  215 tcattgtttataagaatcatagta 238  Q
    ||||||||||||||||||||||||    
T  27736737 tcattgtttataagaatcatagta 27736760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 66 - 239
Target Start/End: Original strand, 42881040 - 42881213
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    ||||||||||| |||  | | |||||||| | ||||||||||||| | |||| ||||| |||||| |||| ||||||||||| ||||||||||||||||     
T  42881040 gggaacttctatggtacacttgtaaattgtggtgtaccggtacttttacttcttaaatctataaattaacaatcaattttatgaaataaatagttattta 42881139  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    |||||||||||||| ||||||||||  |  || ||||||||| |||||||||||||||||||||||||||||||    
T  42881140 tcggcatttatattttagaaaatatcttctcataagaaaaacacatcattcattgtttataagaatcatagtaa 42881213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 68 - 235
Target Start/End: Original strand, 43958996 - 43959163
Alignment:
Q  68 gaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||||||||||  | | |||||||  | ||||||||||||  | |||| ||||| |||||| |||||||||||||||| ||||||||||| |||||||    
T  43958996 gaacttctacggtacacttgtaaattatggtgtaccggtactcttacttcctaaatctataaattaacgatcaattttatgaaataaatagtcatttgtc 43959095  T
Q  168 ggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcata 235  Q
    |||||||||||| ||||||| || ||| || ||||||||| ||| ||||||||||||||||| |||||    
T  43959096 ggcatttatattttagaaaacatcatttcataagaaaaacacattattcattgtttataagagtcata 43959163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 66 - 191
Target Start/End: Complemental strand, 50189419 - 50189294
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||||||||||| ||  | |||||||||||| |||||| |||||  |||||||||||| ||||||||||||||||||||||| |||||||||  ||||||    
T  50189419 gggaacttctacagtacactcgtaaattgaggtgtaccagtactcttgcttcataaatctataaactaacgatcaattttatgaaataaataaatatttg 50189320  T
Q  166 tcggcatttatattatagaaaatatg 191  Q
    |||||||||||||| |||||||||||    
T  50189319 tcggcatttatattttagaaaatatg 50189294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 34594993 - 34595139
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||| || |||| || |||||||| ||| |||||||||| | |||| ||||||||||| ||||||||||||||||||| ||||||||||   ||||||    
T  34594993 taaattaaggtgtatcgatacttctgtttc-taaatttatacattaacaatcaattttatgaaataaatagttatttgtcagcatttatatatcagaaaa 34595091  T
Q  188 tatgattccagaagaaaaacgcatcattcattgtttataagaatcata 235  Q
    ||| ||| ||  | |||||| |||||||||||||||||||||||||||    
T  34595092 tatcatttcatgataaaaacacatcattcattgtttataagaatcata 34595139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 11038046 - 11038215
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    ||||||||||||||   | || |||||| || ||||||| |||| ||||||| |||||||||  | |||| ||||||||||| ||||||| ||||||||     
T  11038046 gggaacttctacggcaaactcataaattaaggtgtaccgatactcctgcttcttaaatttatgcattaacaatcaattttatgaaataaaaagttattta 11038145  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcata 235  Q
    ||||||||| |||   ||||||||| ||| || || |||||| ||||||||||||||||||||| |||||    
T  11038146 tcggcatttgtatctcagaaaatatcatttcataaaaaaaacacatcattcattgtttataagagtcata 11038215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 88 - 235
Target Start/End: Complemental strand, 28967916 - 28967769
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||| || |||||||||||| ||||||  |||||||||| | |||  |||| |||||| |||||||| |||||||||||||||||||||   ||||||    
T  28967916 taaattaaggtgtaccggtactcctgctttttaaatttatatattaaaaatca-ttttatgaaataaatggttatttgtcggcatttatatctcagaaaa 28967818  T
Q  188 -tatgattccagaagaaaaacgcatcattcattgtttataagaatcata 235  Q
     ||| ||| || ||||||||| |||||||||||||||||||||||||||    
T  28967817 atatcatttcataagaaaaacacatcattcattgtttataagaatcata 28967769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 46549159 - 46548991
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    ||||||||||||| |  | |||||||||  ||||||| | ||||  |||||  ||||| |||||| ||||||| |||||||| ||||||||||||| |||    
T  46549159 gggaacttctacgatacactcgtaaattatgatgtactgatactcttgctttctaaatctataaattaacgataaattttatgaaataaatagtta-ttg 46549061  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcata 235  Q
    | |||||||||||| || ||||||| ||| || ||||||||| |||||||  ||||||||| ||||||||    
T  46549060 ttggcatttatattttaaaaaatattatttcataagaaaaacacatcatttgttgtttatatgaatcata 46548991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 68 - 227
Target Start/End: Complemental strand, 31908846 - 31908686
Alignment:
Q  68 gaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||||||||||  |  || ||||| || ||||||||||||  | ||||| ||||||||||| |||| ||||||||||| ||||||| || |||||||     
T  31908846 gaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcaattttatgaaataaaaagctatttgtt 31908747  T
Q  168 ggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataa 227  Q
    |  ||||||||| || ||||||| ||| || ||||||||  ||||| ||||||||||||||    
T  31908746 gatatttatattttaaaaaatatcatttcataagaaaaaatcatcatttcattgtttataa 31908686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 9356381 - 9356552
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttattt 164  Q
    ||||||||||||||| || ||  ||| |||||||||   ||||||||||||||||| |||||||| |||  ||||  ||||||||||||||||| |||||    
T  9356381 gggaacttctacggtatactcacaaaatgagatgtattagtacttctgcttcataattttataaattaaaaatcattttttataaaataaatagctattt 9356480  T
Q  165 gtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    ||    ||||||||| || | ||||| ||| || ||||||||   |||| ||||||||||||||||||||||    
T  9356481 gttaatatttatattttatagaatattatttcataagaaaaaaaaatcatttcattgtttataagaatcata 9356552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 1433829 - 1433976
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||| || |||||||||| | ||||||| |||||||||  | |||| ||||||||||| ||||||| ||||||||||| |||||| |||   ||||||    
T  1433829 taaattaaggtgtaccggtattcctgcttcctaaatttatgcattaacaatcaattttatgaaataaaaagttatttgtc-gcatttgtatctcagaaaa 1433927  T
Q  188 tatgattcca-gaagaaaaacgcatcattcattgtttataagaatcata 235  Q
    ||| ||| ||  || |||||  ||||||||||||||||||||| |||||    
T  1433928 tatcatttcataaaaaaaaaaacatcattcattgtttataagagtcata 1433976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 50187783 - 50187732
Alignment:
Q  186 aatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagt 237  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  50187783 aatatgatttcagaagaaaaatgcatcattcattgtttataagaatcatagt 50187732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 167
Target Start/End: Complemental strand, 32570750 - 32570673
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||||| ||||||||||||  | ||||||||||||||||| |||||||| ||||||| |||||||||| ||||||||    
T  32570750 aaattgaggtgtaccggtactcttacttcataaatttataaattaacgatc-attttatgaaataaataggtatttgtc 32570673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 235
Target Start/End: Complemental strand, 36091443 - 36091293
Alignment:
Q  87 gtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaa 186  Q
    ||||||| || ||||||||||||  | ||||| ||||||||||| |||| |||| |||||| ||||||| || ||||||| |  |||| |||| ||||||    
T  36091443 gtaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagctatttgttgatatttgtattttagaaa 36091344  T
Q  187 atatgattccagaag-aaaaacgcatca-ttcattgtttataagaatcata 235  Q
    |||| ||| || ||| |||||  ||||| |||||||||||||| |||||||    
T  36091343 atatcatttcataagaaaaaaaacatcatttcattgtttataaaaatcata 36091293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 239
Target Start/End: Complemental strand, 38008563 - 38008386
Alignment:
Q  63 aaggggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt-ataaaataaatagtta 161  Q
    ||||||||||||||||||| | ||  ||| |||| |||| || ||||  | |||||||| |||||||| ||||||||| |||| || |||||||||  ||    
T  38008563 aaggggaacttctacggtgcactcacaaaatgaggtgtatcgatactctttcttcataattttataaattaacgatcattttttatgaaataaataacta 38008464  T
Q  162 tttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cattgtttataagaatcatagtaa 239  Q
    ||||||   ||||||||| || | || || ||| || ||||||||  ||||||| ||||||||||||||||||||||||    
T  38008463 tttgtcaatatttatattgtatagaacatcatttcataagaaaaaa-catcatttcattgtttataagaatcatagtaa 38008386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 239
Target Start/End: Original strand, 5970726 - 5970873
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttatttgtcggcatttatattatagaaaatatg 191  Q
    |||||||||||||||||  |||||||||| |||||||| |||  ||||  ||||||  ||||||||| ||||||||   ||||||||| || | |||||     
T  5970726 tgagatgtaccggtactcttgcttcataattttataaattaataatcattttttatgtaataaatagctatttgtcaatatttatattttatagaatatc 5970825  T
Q  192 attccagaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    ||| || ||||||||  ||||| |||||||||||||||||| |||||||    
T  5970826 atttcataagaaaaa-acatcatttcattgtttataagaattatagtaa 5970873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 189
Target Start/End: Original strand, 39412193 - 39412292
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaat 188  Q
    ||||| || ||||||| |||| ||||| |||||||||||||| |||| ||| |||||||||||||||||||||||| ||    |||||||| ||||||||    
T  39412193 aaattaaggtgtaccgatactcctgctacataaatttataaattaacaatc-attttataaaataaatagttatttatcaatgtttatattttagaaaat 39412291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 91 - 167
Target Start/End: Complemental strand, 48262942 - 48262867
Alignment:
Q  91 attgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||| |||||| |||||||  ||||||||||||||||| |||||||| ||||||| |||||||||| ||||||||    
T  48262942 attgaggtgtaccagtacttccacttcataaatttataaattaacgatc-attttatgaaataaatagatatttgtc 48262867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 235
Target Start/End: Complemental strand, 56272962 - 56272815
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||| || |||||||||||  ||| |||||||||  |||| |||||||||| ||||||  || ||| |||||||| ||| | |||||||| |||||||    
T  56272962 taaattaaggtgtaccggtacacctgtttcataaatcaataagctaacgatcatttttatgtaaaaaagagttatttatcgacttttatattttagaaaa 56272863  T
Q  188 tatgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    ||| ||| || ||||||||   |||| |||||| |||||||||||||||    
T  56272862 tattatttcataagaaaaa-atatcatttcattatttataagaatcata 56272815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 187
Target Start/End: Complemental strand, 19627971 - 19627873
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| ||||||||||||| | ||||||||||||||||   |||| || ||||||| |||||| ||||||||||||   ||||||||| |||||||    
T  19627971 taaattgaggtgtaccggtacttttacttcataaatttataattgaacg-tccattttattaaataattagttatttgtcaatatttatattttagaaaa 19627873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 66 - 239
Target Start/End: Complemental strand, 50776178 - 50776004
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt-ataaaataaatagttattt 164  Q
    |||||||||||||||  | |  |||| |||| |||| |||||||  |  ||||||| |||||||| |||| |||| |||| || ||||||||| ||||||    
T  50776178 gggaacttctacggtacacttataaaatgaggtgtatcggtactattttttcataattttataaattaacaatcattttttatgaaataaataattattt 50776079  T
Q  165 gtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cattgtttataagaatcatagtaa 239  Q
    |||   ||||||||| || |||| || ||| || ||||||||  ||||||| ||||||||||||||||||||||||    
T  50776078 gtcaatatttatattttataaaacatcatttcataagaaaaaa-catcatttcattgtttataagaatcatagtaa 50776004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 206
Target Start/End: Original strand, 34936577 - 34936695
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||| || |||||||||||| ||| |||||||||  ||||  ||||||||| ||||||  || |||||| |||| |||| | |||||||| |||||||    
T  34936577 taaattaaggtgtaccggtactcctgtttcataaatcaataagttaacgatcatttttatgtaaaaaatagctattcgtcgacttttatattttagaaaa 34936676  T
Q  188 tatgattccagaagaaaaa 206  Q
    ||| ||| || ||||||||    
T  34936677 tattatttcataagaaaaa 34936695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 54178802 - 54178706
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| ||||||| |||| |||||||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  54178802 aaattgaggtgtaccgatact-ctgcttcataaatttataaattaatgatc-attttattaaataagttgttatttgtcattatttatattttagaaaa 54178706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 166
Target Start/End: Original strand, 32288903 - 32289004
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttattt 164  Q
    ||||| ||||||||| || || |||| |||| | || ||||||||||||||||||| |||||| | |||||||||  |||||| |||||||||| |||||    
T  32288903 gggaatttctacggtatattcataaagtgaggtatatcggtacttctgcttcataattttatatattaacgatcattttttatgaaataaatagctattt 32289002  T
Q  165 gt 166  Q
    ||    
T  32289003 gt 32289004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 42680653 - 42680761
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| ||||||||| |||||| ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||  ||||| |||||    
T  42680653 aaatttataaattaacgatcacttttatgaaataaaaagctatttgtcaatatttatattttagaaaacatcatttcacaagaaaaa-acatcatttcat 42680751  T
Q  219 tgtttataag 228  Q
    ||||||||||    
T  42680752 tgtttataag 42680761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 16004588 - 16004703
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||| ||||| || ||||||| || ||||||||   ||||||||| |||||||||| ||| || ||||||||| ||||||| |||    
T  16004588 aaatatataaattaaagataaatttaatgaaataaaaaggtatttgtcaatatttatattttagaaaatatcatttcataagaaaaac-catcatttcat 16004686  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  16004687 tgtttataaggatcata 16004703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 46222047 - 46222162
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| |||||||||| ||| || ||||||||| ||||||| |||    
T  46222047 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaatatcatttcataagaaaaac-catcatttcat 46222145  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  46222146 tgtttataaggatcata 46222162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 22077744 - 22077674
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttattt 164  Q
    |||| |||||||||||| |||||||| ||||||||||  |||||||| ||||||| ||||||| ||||||||    
T  22077744 tgaggtgtaccggtactcctgcttcaaaaatttataatttaacgatc-attttatgaaataaagagttattt 22077674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 187
Target Start/End: Original strand, 25684116 - 25684213
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||||||||| || |||| |||||||||||||||||||| ||| |||| ||||||| |||||| |  |||||||||   ||||||||| |||||||    
T  25684116 taaattgagatgtatcgatact-ctgcttcataaatttataaattaatgatc-attttatgaaataagttattatttgtcattatttatattttagaaaa 25684213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 239
Target Start/End: Original strand, 33491162 - 33491335
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttattt 164  Q
    |||||||||||||||  | ||  ||| ||||||||||||||||| ||||||||||| |  ||||| ||||||||| |||||||  ||||||||  |||||    
T  33491162 gggaacttctacggtacattcacaaagtgagatgtaccggtactcctgcttcataattaaataaattaacgatcatattttatgtaataaata-ctattt 33491260  T
Q  165 gtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
     ||   ||||||||| || | || || ||| || ||||||||  ||||| |||||||||||||||||| |||||||    
T  33491261 ttcaatatttatattttatagaacattatttcataagaaaaa-acatcatttcattgtttataagaattatagtaa 33491335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 239
Target Start/End: Original strand, 36631032 - 36631209
Alignment:
Q  62 aaaggggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt-ataaaataaatagtt 160  Q
    |||||||||||||||||||  | ||  ||| |||| |||| |||||||  |  ||||||| |||||||| ||||||||| |||| || |||||||||  |    
T  36631032 aaaggggaacttctacggtacactcacaaaatgaggtgtaacggtactattt-ttcataattttataaattaacgatcattttttatgaaataaataact 36631130  T
Q  161 atttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cattgtttataagaatcatagtaa 239  Q
    ||||||    ||||||||| || |||| || ||| || ||||||||  ||||||| ||||||||||||||||||||||||    
T  36631131 atttgttaatatttatattttataaaacatcatttcataagaaaaaa-catcatttcattgtttataagaatcatagtaa 36631209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 235
Target Start/End: Original strand, 38955074 - 38955212
Alignment:
Q  98 tgtaccggtacttctgcttcataaatt-tataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattcc 196  Q
    ||||||||||||  || |||||||| | |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| |||||||||| ||| |    
T  38955074 tgtaccggtactcttgtttcataaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaatatcatttc 38955173  T
Q  197 agaagaaaaacgcatcatt-cattgtttataagaatcata 235  Q
    | ||||||||  ||||||| ||||||||||||| ||||||    
T  38955174 ataagaaaaat-catcatttcattgtttataaggatcata 38955212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 43363695 - 43363636
Alignment:
Q  105 gtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttattt 164  Q
    ||||| || |||||||| |||||||| ||||||||| |||||| ||||||||||||||||    
T  43363695 gtactcctacttcataattttataaattaacgatcatttttatgaaataaatagttattt 43363636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 235
Target Start/End: Complemental strand, 47302803 - 47302632
Alignment:
Q  65 ggggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttattt 164  Q
    ||||||||||||||||  |  |||||||| || | |||||||||| || ||| | |||| | |||| |||| || | |||||| ||||||| ||||||||    
T  47302803 ggggaacttctacggtacatccgtaaattaagttttaccggtactcctactttaaaaatctttaaattaactattatttttatgaaataaagagttattt 47302704  T
Q  165 gtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    || |  ||||||||| |||||||| | ||| || ||||||||  | ||| || ||||||||||| |||||||    
T  47302703 gttgatatttatattttagaaaatgtcatttcataagaaaaaaacgtcattttattgtttataaaaatcata 47302632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 5474029 - 5474125
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||  ||||||| |||| |||||||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  5474029 aaattgatgtgtaccgatact-ctgcttcataaatttataaattaatgatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 5474125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 25607714 - 25607791
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||||| ||||||||||||    ||||||||||||||||| |||||||  ||||||| |||||||||| ||||||||    
T  25607714 aaattgaggtgtaccggtactctcacttcataaatttataaattaacgat-tattttatgaaataaataggtatttgtc 25607791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 48207460 - 48207364
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| ||||||| |||| |||||||||||||||||||| ||| |||| ||||||| | |||| | ||||||||||   ||||||||| |||||||    
T  48207460 aaattgaggtgtaccgatact-ctgcttcataaatttataaattaatgatc-attttatgagataagttgttatttgtcattatttatattttagaaaa 48207364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 52323990 - 52324067
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||||| ||||||| |||| ||||| |||||||||||||| | || ||| ||||||| |||||| ||||||||||||    
T  52323990 aaattgaggtgtaccgatactcctgctacataaatttataaatttacaatc-attttatgaaataagtagttatttgtc 52324067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 187
Target Start/End: Original strand, 6882575 - 6882651
Alignment:
Q  110 tctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  6882575 tctgcttcataaatttataaattaatgatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 6882651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 190
Target Start/End: Complemental strand, 9858632 - 9858531
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaat 188  Q
    ||||| || ||||||||||||  | ||||| ||||||||||| |||| || | |||||| ||||||| || ||||||| |  ||||||||| ||||||||    
T  9858632 aaattaaggtgtaccggtactcttacttcaaaaatttataaattaactattatttttatgaaataaaaagctatttgttgatatttatattttagaaaat 9858533  T
Q  189 at 190  Q
    ||    
T  9858532 at 9858531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 110 - 187
Target Start/End: Complemental strand, 32882621 - 32882545
Alignment:
Q  110 tctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  32882621 tctgcttcataaatttataaattaatgatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 32882545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 239
Target Start/End: Complemental strand, 56303222 - 56303070
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttatttgtcggcatttatattatagaaa 186  Q
    |||| |||| |||||||||||| |||||| |||| |||||||| ||||||| |  ||||||  |||||||| |||||||||   ||||||||| || | |    
T  56303222 taaagtgaggtgtaccggtactcctgctttataattttataaattaacgataattttttatgtaataaatatttatttgtcaaaatttatattttataga 56303123  T
Q  187 atatgattccagaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    | || ||  || ||||||||  ||||| |||||||||||||||||| |||||||    
T  56303122 acatcatctcataagaaaaa-acatcatttcattgtttataagaattatagtaa 56303070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 10779046 - 10779161
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| |||||||||| ||| |  ||||||||| ||||||| |||    
T  10779046 aaatatataaattaaagatcactttaatgaaataaaaagatatttgtcaatatttatattttagaaaatatcatttcgtaagaaaaac-catcatttcat 10779144  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  10779145 tgtttataaggatcata 10779161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 46630700 - 46630815
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||||||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||  ||||||| |||    
T  46630700 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaat-catcatttcat 46630798  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  46630799 tgtttataaggatcata 46630815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 51282309 - 51282241
Alignment:
Q  98 tgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgt 166  Q
    ||||||||||||  | ||||| ||||||||||| |||| |||| |||||| ||||||| ||||||||||    
T  51282309 tgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagttatttgt 51282241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 164
Target Start/End: Complemental strand, 21424520 - 21424450
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttattt 164  Q
    |||||||||||||||||  | ||||||||||| ||||| |||||||  ||||||| ||||||| ||||||||    
T  21424520 tgagatgtaccggtactcttacttcataaattgataaattaacgat-tattttatgaaataaaaagttattt 21424450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 164
Target Start/End: Original strand, 39953609 - 39953683
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttattt 164  Q
    |||||||| ||||||||||||||||||||| | ||||| ||  |||||||  ||||||| ||||||| ||||||||    
T  39953609 aaattgaggtgtaccggtacttctgcttcaaatatttacaatttaacgat-tattttatgaaataaagagttattt 39953683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 239
Target Start/End: Original strand, 42177342 - 42177516
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt-ataaaataaatagttattt 164  Q
    |||||||||||||||  | ||  ||| |||| |||| |||||||  | |||||||| |||||||| ||||||||| |||| || |||||||||  |||||    
T  42177342 gggaacttctacggtacactcacaaaatgaggtgtatcggtactctttcttcataattttataaattaacgatcattttttatgaaataaataactattt 42177441  T
Q  165 gtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
     ||   ||||||||| || | || || ||| || ||||||||  ||||| ||| ||||||||||||||||||||||    
T  42177442 atcaatatttatattttatagaacatcatttcataagaaaaaa-catcagttcgttgtttataagaatcatagtaa 42177516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 164
Target Start/End: Original strand, 43349090 - 43349164
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttattt 164  Q
    |||||||| |||||||||||| |||||||| | ||||||||  |||||||  ||||||| ||||||| ||||||||    
T  43349090 aaattgaggtgtaccggtactcctgcttcaaatatttataatttaacgat-tattttatgaaataaagagttattt 43349164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 167
Target Start/End: Complemental strand, 126984 - 126882
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttattt 164  Q
    |||||||||||||||  | || |||| |||| |||| ||||||| ||||||| ||| ||||||||  ||||||||  ||||||  | |||||||||||||    
T  126984 gggaacttctacggtacactcataaaatgaggtgtatcggtactcctgcttcttaattttataaatgaacgatcattttttatgtagtaaatagttattt 126885  T
Q  165 gtc 167  Q
    |||    
T  126884 gtc 126882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 595320 - 595393
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatt 163  Q
    |||||||| |||||||||||| || ||||| ||||||||||  |||||  | ||||||||||||||| |||||||    
T  595320 aaattgaggtgtaccggtactcctacttcaaaaatttataatttaacg-gccattttataaaataaaaagttatt 595393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 140
Target Start/End: Complemental strand, 5340343 - 5340301
Alignment:
Q  98 tgtaccggtacttctgcttcataaatttataaactaacgatca 140  Q
    |||||||||||| ||||||||||| |||||||| |||||||||    
T  5340343 tgtaccggtactcctgcttcataattttataaattaacgatca 5340301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 6807010 - 6807087
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||||| ||||| | |||| ||| | |||||||||||||| |||| ||| ||||||| |||||| ||||||||||||    
T  6807010 aaattgaggtgtacggatactcctgatacataaatttataaattaacaatc-attttatgaaataagtagttatttgtc 6807087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 17281798 - 17281894
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| ||||||| | || |||||||||||||||||||| ||| |||| ||||||| | |||| | ||||||||||   ||||||||| |||||||    
T  17281798 aaattgaggtgtaccgattct-ctgcttcataaatttataaattaatgatc-attttatgagataagttgttatttgtcattatttatattttagaaaa 17281894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 17370300 - 17370396
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| ||||||| | || |||||||||||||||||||| ||| |||| ||||||| | |||| | ||||||||||   ||||||||| |||||||    
T  17370300 aaattgaggtgtaccgattct-ctgcttcataaatttataaattaatgatc-attttatgagataagttgttatttgtcattatttatattttagaaaa 17370396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 231
Target Start/End: Original strand, 17616459 - 17616572
Alignment:
Q  118 ataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttc 216  Q
    ||||||||||||| ||||||| | ||||||   ||||| || ||||| ||| | |||||||| |||||||||| || ||| ||||||||  ||||| |||    
T  17616459 ataaatttataaattaacgataatttttatgtgataaagagatatttatcgacttttatattttagaaaatattatcccataagaaaaa-acatcatttc 17616557  T
Q  217 attgtttataagaat 231  Q
    ||| |||||||||||    
T  17616558 attttttataagaat 17616572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 30168122 - 30168199
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||||  ||||||| |||| ||||| |||| ||||||||| |||| |||| |||||| |||||| ||||||||||||    
T  30168122 aaattgaagtgtaccgatactcctgctacatatatttataaattaacaatca-ttttatgaaataagtagttatttgtc 30168199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 189
Target Start/End: Original strand, 1791854 - 1791949
Alignment:
Q  92 ttgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaata 189  Q
    ||||| ||||||| |||| |||||||||||||||||||| |||  ||| ||||| | |||||||| ||||||| ||   ||||||||| |||||||||    
T  1791854 ttgaggtgtaccgatact-ctgcttcataaatttataaattaataatc-attttttgaaataaattgttatttatcattatttatattttagaaaata 1791949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 11038276 - 11038243
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  11038276 ttatcgctcataatagagaactttgattatttta 11038243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 33491828 - 33491795
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  33491828 ttatcgctcataatagagaactttgattatttta 33491795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 33612875 - 33612767
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| ||||||||| ||| || ||||||| |  ||||||||   ||||||||| ||||||| || ||| || ||||||||| || || |||||    
T  33612875 aaatttataaattaacgatcactttaatgaaataaaaaagtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-cagcatttcat 33612777  T
Q  219 tgtttataag 228  Q
    ||||||||||    
T  33612776 tgtttataag 33612767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 231
Target Start/End: Complemental strand, 36188251 - 36188135
Alignment:
Q  115 ttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca- 213  Q
    |||||||||||||||  ||||||| | ||||||   ||||| || ||||| ||| | |||||||| |||||||||| || ||| ||||||||  |||||     
T  36188251 ttcataaatttataagttaacgataatttttatgtgataaagagatatttatcgacttttatattttagaaaatattatcccataagaaaaa-acatcat 36188153  T
Q  214 ttcattgtttataagaat 231  Q
    |||||| |||||||||||    
T  36188152 ttcattttttataagaat 36188135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 54505633 - 54505738
Alignment:
Q  124 ttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtt 222  Q
    ||||||| ||| ||||| |||||||||||||| | |||||||||   ||||||||| |||||||  | ||  || ||||||||  ||||| |||||||||    
T  54505633 ttataaattaatgatcatttttataaaataaaaatttatttgtcaatatttatattttagaaaacgtcatatcataagaaaaaaacatcatttcattgtt 54505732  T
Q  223 tataag 228  Q
    ||||||    
T  54505733 tataag 54505738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 231
Target Start/End: Complemental strand, 3690895 - 3690753
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaact-aacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| |||| || || | || ||||||||||||||||| | |||||| | |||||| |||||| | |||||||||||  || |||||| |||||||    
T  3690895 aaattgaggtgtatcgatattcctacttcataaatttataaatttaacgatta-ttttatgaaataagttgttatttgtcgatatctatattttagaaaa 3690797  T
Q  188 tatgattccagaagaaaaacgcatca-ttcattgtttataagaat 231  Q
     || || |||  |||||||  ||||| ||||||||||||||||||    
T  3690796 catcatcccatgagaaaaa-acatcagttcattgtttataagaat 3690753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 9579687 - 9579829
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| ||||| |||||| || ||||| ||||||||||  |||| || | |||||| ||||||| |||||||  ||   ||||||||| |||||||    
T  9579687 taaattgagttgtactggtactcctacttcaaaaatttataatttaacaatta-ttttatgaaataaagagttattcatcaatatttatattttagaaaa 9579785  T
Q  188 tatgattccagaagaaaaacgcatcatt-cattgtttataagaat 231  Q
     || |||  | ||||||||  ||||||| ||||||||||||||||    
T  9579786 catcattttataagaaaaaa-catcatttcattgtttataagaat 9579829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 9585382 - 9585524
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| ||||| |||||| || ||||| ||||||||||  |||| || | |||||| ||||||| |||||||  ||   ||||||||| |||||||    
T  9585382 taaattgagttgtactggtactcctacttcaaaaatttataatttaacaatta-ttttatgaaataaagagttattcatcaatatttatattttagaaaa 9585480  T
Q  188 tatgattccagaagaaaaacgcatcatt-cattgtttataagaat 231  Q
     || |||  | ||||||||  ||||||| ||||||||||||||||    
T  9585481 catcattttataagaaaaaa-catcatttcattgtttataagaat 9585524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 23639291 - 23639405
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||||||||| ||| || ||||||| || |||| |||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  23639291 aaatatataaattaacgatcactttaatgaaataaaaaggtatt-gtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 23639388  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  23639389 tgtttataaggatcata 23639405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 29582372 - 29582308
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaa 130  Q
    |||||||||||||||  | ||  |||||||| ||||||||||||| | |||||||| ||||||||    
T  29582372 gggaacttctacggtacactcacaaattgaggtgtaccggtacttttccttcataattttataaa 29582308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 157
Target Start/End: Original strand, 30348163 - 30348255
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaata 157  Q
    ||||||| |||||||  ||||  ||| |||| ||||||||||||  | |||||||| |||||||| |||||||||  |||||| |||||||||    
T  30348163 gggaactactacggtacaatcacaaaatgaggtgtaccggtactctttcttcataattttataaattaacgatcattttttatgaaataaata 30348255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 36570000 - 36569885
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||  ||||||| |||    
T  36570000 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaat-catcatttcat 36569902  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  36569901 tgtttataaggatcata 36569885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 42244592 - 42244707
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||||||||| ||| || ||||||| || ||||||||   ||||||||| || |||| || ||| || ||||||||  ||||||| |||    
T  42244592 aaatatataaattaacgatcactttaatgaaataaaaagatatttgtcaatatttatattttataaaacatcatttcataagaaaaat-catcatttcat 42244690  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  42244691 tgtttataaggatcata 42244707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 285
Target Start/End: Original strand, 50187677 - 50187709
Alignment:
Q  253 tatcgctcataataaagaactttgattatttta 285  Q
    |||||||||||||| ||||||||||||||||||    
T  50187677 tatcgctcataatagagaactttgattatttta 50187709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 231
Target Start/End: Complemental strand, 52940864 - 52940722
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| |||||||||| |  | ||||| ||||||| ||  ||| ||| | |||||| ||||||| |||||||| |||  ||||||||| |||||||    
T  52940864 taaattgaggtgtaccggtattcttacttcaaaaatttagaatttaaggatta-ttttatgaaataaagagttatttatcgatatttatattttagaaaa 52940766  T
Q  188 tatgattccagaagaaaaacgcatcatt-cattgtttataagaat 231  Q
     || |||  | ||||||||  ||||||| ||||||||||||||||    
T  52940765 catcattttataagaaaaaa-catcatttcattgtttataagaat 52940722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 54499926 - 54499819
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| ||||||||| ||| || | ||||| || |||||||    ||||||||| ||||||| || ||| || ||||||||| ||||| |||||    
T  54499926 aaatttataaattaacgatcactttaatgagataaaaaggtatttgttaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 54499828  T
Q  219 tgtttataa 227  Q
    |||||||||    
T  54499827 tgtttataa 54499819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 118; Significance: 3e-60; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 66 - 239
Target Start/End: Original strand, 36672010 - 36672183
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    ||||||||||| |||  | |||||||||||| ||||||||||||  |||||||||||| ||||||||||| ||||||||||| ||||||||||||| | |    
T  36672010 gggaacttctatggtacactcgtaaattgaggtgtaccggtactcttgcttcataaatctataaactaactatcaattttatgaaataaatagttactag 36672109  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  36672110 tcggcatttatattttagaaaatatgatttcagaagaaaaacgcatcattcattgtttataagaatcatagtaa 36672183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 85 - 237
Target Start/End: Complemental strand, 6631500 - 6631348
Alignment:
Q  85 tcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattataga 184  Q
    |||||||||||| |||| |||||||  |||||||||||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||    
T  6631500 tcgtaaattgaggtgtatcggtactcttgcttcataaatctataaactaacgatcaattttatgaaataattagttatttgtcggcatttatattttaga 6631401  T
Q  185 aaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagt 237  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6631400 aaatatgatttcagaagaaaaacgcatcattcattgtttataagaatcatagt 6631348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 17792610 - 17792441
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    ||||||||||| |||  | || |||||| || |||| ||||||| ||||||| |||||||||| | |||| ||||||||||| |||||||||||||||||    
T  17792610 gggaacttctatggtacactcataaattaaggtgtatcggtactcctgcttcctaaatttatacattaacaatcaattttatgaaataaatagttatttg 17792511  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcata 235  Q
    |||||||||||||   ||||||||| ||| || ||||||||| |||||||||||||||||||||||||||    
T  17792510 tcggcatttatatctcagaaaatatcatttcataagaaaaacacatcattcattgtttataagaatcata 17792441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 88 - 235
Target Start/End: Complemental strand, 27172298 - 27172151
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||| || |||| ||||||| ||||||| |||||||||| | |||| ||||||||||| ||||||||||||||||||||||||||||||   ||||||    
T  27172298 taaattaaggtgtatcggtactcctgcttcctaaatttatacattaacaatcaattttatgaaataaatagttatttgtcggcatttatatctcagaaaa 27172199  T
Q  188 tatgattccagaagaaaaacgcatcattcattgtttataagaatcata 235  Q
    ||| ||| || ||||||||| |||||||||||||||||||||||||||    
T  27172198 tatcatttcataagaaaaacacatcattcattgtttataagaatcata 27172151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 88 - 238
Target Start/End: Original strand, 36274586 - 36274736
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| ||||| ||||||  |||||| ||||| |||||| |||||||||||||||| ||||||||||||||| |||| |||||||||| |||||||    
T  36274586 taaattgaggtgtactggtactcttgcttcctaaatatataaattaacgatcaattttatgaaataaatagttattcgtcgacatttatattttagaaaa 36274685  T
Q  188 tatgattccagaagaaaaacgcatcattcattgtttataagaatcatagta 238  Q
    || |||| || ||||||||| ||||||||||||||||| ||| ||||||||    
T  36274686 taagatttcataagaaaaacacatcattcattgtttatgagattcatagta 36274736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 66 - 239
Target Start/End: Complemental strand, 31158960 - 31158787
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||||||||||||||  | ||| |||||||| |||| | |||||  |||||| ||||| |||||| ||||||| |||||||| |||||||||||||||||    
T  31158960 gggaacttctacggtacactcgcaaattgaggtgtatcagtactcttgcttcctaaatctataaattaacgattaattttatgaaataaatagttatttg 31158861  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
     ||||||||||||| || ||||||| ||| || ||||||||| ||||||||||||||||||  |||||||||||    
T  31158860 ccggcatttatattttaaaaaatatcatttcataagaaaaacacatcattcattgtttatactaatcatagtaa 31158787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 85 - 239
Target Start/End: Complemental strand, 24377689 - 24377544
Alignment:
Q  85 tcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattataga 184  Q
    |||||||||||| ||||||||||||  |||||||||||||||||||||| | ||||||||||| |||||||||||||||| |||||||||||||| ||||    
T  24377689 tcgtaaattgaggtgtaccggtactcttgcttcataaatttataaactagcaatcaattttatgaaataaatagttatttatcggcatttatattttaga 24377590  T
Q  185 aaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    ||||| |||| || |         | |||||||||||||||||||||||||||||    
T  24377589 aaatacgatttcata---------cgtcattcattgtttataagaatcatagtaa 24377544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 104 - 235
Target Start/End: Original strand, 24937623 - 24937754
Alignment:
Q  104 ggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaa 203  Q
    |||||| ||||||| |||||||||| | |||| ||||||||||| ||||||||||||||||||||||||||||||   ||||||||| ||| || |||||    
T  24937623 ggtactcctgcttcttaaatttatacattaacaatcaattttatgaaataaatagttatttgtcggcatttatatctcagaaaatatcatttcataagaa 24937722  T
Q  204 aaacgcatcattcattgtttataagaatcata 235  Q
    |||  ||||||| |||||||||||||||||||    
T  24937723 aaatacatcatttattgtttataagaatcata 24937754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 235
Target Start/End: Complemental strand, 17642479 - 17642308
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||||||||||||||  |  || ||||| || ||||||||||||  | ||||| ||||||||||| |||| |||| |||||| ||||||| || ||||||    
T  17642479 gggaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaattaactatcatttttatgaaataaaaagctatttg 17642380  T
Q  166 tcggcatttatattatagaaaatatgattccagaag-aaaaacgcatca-ttcattgtttataagaatcata 235  Q
    | |  ||||||||| |||||||||| ||| || ||| |||||  ||||| |||||||||||||| |||||||    
T  17642379 ttgatatttatattttagaaaatatcatttcataagaaaaaaaacatcatttcattgtttataaaaatcata 17642308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 235
Target Start/End: Complemental strand, 43460734 - 43460587
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||| || |||||||||||  ||| |||||||||  |||| |||||||||| ||||||  || ||| || ||||||||| | |||||||| |||||||    
T  43460734 taaattaaggtgtaccggtacacctgtttcataaatcaataagctaacgatcatttttatgtaaaaaagagctatttgtcgacttttatattttagaaaa 43460635  T
Q  188 tatgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    ||| ||| || ||||||||   |||| ||||||||||||||||||||||    
T  43460634 tattatttcataagaaaaa-atatcatttcattgtttataagaatcata 43460587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 30777295 - 30777437
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| ||||||| |||| |||||| |||||||||| || ||||||||| |||||| |||||| |||||||| ||    ||||||||| |||||||    
T  30777295 taaattgaggtgtaccgatactcctgctttataaatttatgaattaacgatca-ttttatgaaataagtagttatt-gttaatatttatattttagaaaa 30777392  T
Q  188 tatgattccagaagaaaaacgcatcatt-cattgtttataagaat 231  Q
     || ||  || ||||||||  ||||||| ||||||||||||||||    
T  30777393 catcatctcataagaaaaaaacatcatttcattgtttataagaat 30777437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 2273392 - 2273245
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaat 188  Q
    ||||| || ||||||||||||  | ||||| ||||||||||| ||||  ||| |||||| ||||||| || ||||||| |  |||| |||| ||||||||    
T  2273392 aaattaaggtgtaccggtactcttacttcaaaaatttataaattaactgtcatttttatgaaataaaaagctatttgttgatatttgtattttagaaaat 2273293  T
Q  189 atgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    || |||  | ||||||||  ||||| |||||||||||||| |||||||    
T  2273292 atcattttataagaaaaaaacatcatttcattgtttataaaaatcata 2273245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 231
Target Start/End: Original strand, 5215346 - 5215487
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaat 188  Q
    |||||||||||||||| || | ||  |||||||||||||||| |||||||  |||||||||||||| | |||||||||||  || |||||| |||||||     
T  5215346 aaattgagatgtaccgatattcctatttcataaatttataaattaacgat-tattttataaaataagttgttatttgtcgatatctatattttagaaaac 5215444  T
Q  189 atgattccagaagaaaaacgcatca-ttcattgtttataagaat 231  Q
    || || |||  |||||||  ||||| |||||| |||||||||||    
T  5215445 atcatcccatgagaaaaa-acatcatttcattatttataagaat 5215487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 239
Target Start/End: Original strand, 29454175 - 29454317
Alignment:
Q  98 tgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttatttgtcggcatttatattatagaaaatatgattcc 196  Q
    |||||||||||| ||||||||||| |||||||| |||||||||  ||||||  ||||||||  ||||||||   ||||||||| || | || || ||| |    
T  29454175 tgtaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaataactatttgtcaatatttatattttatagaacatcattgc 29454274  T
Q  197 agaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    | ||||||||  ||||| |||||||||||||||||| |||||||    
T  29454275 ataagaaaaa-acatcatttcattgtttataagaattatagtaa 29454317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 32718977 - 32719124
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||| || |||||||||||| ||  |||||||||| ||||  ||||||||| ||||||  || ||| |  ||||||||| | |||||||| |||||||    
T  32718977 taaattaaggtgtaccggtactcctatttcataaattaataagttaacgatcatttttatgtaaaaaagaactatttgtcgacttttatattttagaaaa 32719076  T
Q  188 tatgattccagaagaaaaacgcatcattcattgtttataagaatcata 235  Q
    ||| ||| || ||||||||    |  ||||||||||||||||||||||    
T  32719077 tattatttcataagaaaaaatattatttcattgtttataagaatcata 32719124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 187
Target Start/End: Original strand, 11360212 - 11360289
Alignment:
Q  109 ttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||| | ||||||||||   ||||||||| |||||||    
T  11360212 ttctgcttcataaatttataaattaatgatc-attttataaaataagttgttatttgtcattatttatattttagaaaa 11360289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 36569685 - 36569781
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| ||||||| || |||||||| ||||||||||||| ||| ||||| ||||||||||||| | ||||||||||   ||||||||| |||||||    
T  36569685 aaattgaggtgtaccgata-ttctgctttataaatttataaattaatgatca-ttttataaaataagttgttatttgtcattatttatattttagaaaa 36569781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 44636945 - 44637041
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| ||||||| || |||||||||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  44636945 aaattgaggtgtaccgata-ttctgcttcataaatttataaattaatgatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 44637041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 189
Target Start/End: Original strand, 5982211 - 5982306
Alignment:
Q  92 ttgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaata 189  Q
    ||||| ||||||| |||| |||||||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||||    
T  5982211 ttgaggtgtaccgatact-ctgcttcataaatttataaattaatgatc-attttatgaaataagttgttatttgtcattatttatattttagaaaata 5982306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 167
Target Start/End: Complemental strand, 2261426 - 2261318
Alignment:
Q  60 taaaaggggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatag 158  Q
    ||||||||||||||||| |||  | ||  ||| |||| |||||||||||| ||||||||||| ||| |||| |||||||||  ||||||  |||||||||    
T  2261426 taaaaggggaacttctatggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttgtaaattaacgatcattttttatgtaataaatag 2261327  T
Q  159 ttatttgtc 167  Q
     ||||||||    
T  2261326 ctatttgtc 2261318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 231
Target Start/End: Original strand, 29265616 - 29265755
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttatttgtcggcatttatattatagaaaatatg 191  Q
    |||| ||||||||||||  || ||||||| |||||||| |||||||||  |||||| |||||||||  ||||| ||  |||||||||| || | |||||     
T  29265616 tgaggtgtaccggtactcttgtttcataattttataaattaacgatcattttttatgaaataaataactatttatcaacatttatattttatagaatatc 29265715  T
Q  192 attccagaagaaaaacgcatca-ttcattgtttataagaat 231  Q
    |||||| ||||||||   |||| ||||||||||||||||||    
T  29265716 attccacaagaaaaa-aaatcatttcattgtttataagaat 29265755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 32238288 - 32238205
Alignment:
Q  119 taaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaa 203  Q
    |||||||||||| ||||||||| |||||| ||||||| |||||||||||| | |||||||| || ||||||| ||| || |||||    
T  32238288 taaatttataaattaacgatcatttttatgaaataaa-agttatttgtcgacttttatattttaaaaaatatcatttcataagaa 32238205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 167
Target Start/End: Original strand, 40776664 - 40776739
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttatttgtc 167  Q
    |||||||||||| |||| ||||||||||| |||||||| |||||||||  ||||||  ||||||||| ||||||||    
T  40776664 tgagatgtaccgatactcctgcttcataattttataaattaacgatcattttttatggaataaatagctatttgtc 40776739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 206
Target Start/End: Complemental strand, 12980353 - 12980279
Alignment:
Q  132 taacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaa 206  Q
    ||||||||| ||||||  |||||| || ||||||||||| |||||||| |||||||||| ||| || ||||||||    
T  12980353 taacgatcatttttatgtaataaagagatatttgtcggcttttatattttagaaaatattatttcataagaaaaa 12980279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 34047449 - 34047514
Alignment:
Q  98 tgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttattt 164  Q
    ||||||||||||||| ||||| ||||||||||  |||||||  ||||||||||||||| ||||||||    
T  34047449 tgtaccggtacttctacttcaaaaatttataatttaacgat-tattttataaaataaaaagttattt 34047514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 12266126 - 12266234
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| ||||||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||| |||||    
T  12266126 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 12266224  T
Q  219 tgtttataag 228  Q
    | ||||||||    
T  12266225 tatttataag 12266234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 7223835 - 7223720
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  7223835 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 7223737  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  7223736 tgtttataaggatcata 7223720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 14913899 - 14914014
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  14913899 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 14913997  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  14913998 tgtttataaggatcata 14914014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 27100866 - 27100981
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| || |||||| |||||| ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||| ||||  ||||| |||||    
T  27100866 aaatttataaaatatcgatcatttttatgaaataaaaagctatttgtcaatatttatattttagaaaacatcatttcataaggaaaa-acatcatttcat 27100964  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  27100965 tgtttataaggatcata 27100981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 227
Target Start/End: Complemental strand, 27970394 - 27970257
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| ||||||||||| ||| ||||| ||||||||||  ||| |||  ||||||| ||||||| |||||||| |||  ||||||||| |||||||    
T  27970394 taaattgaggtgtaccggtac-tctacttcaaaaatttataatttaaggat-tattttatgaaataaagagttatttatcgatatttatattttagaaaa 27970297  T
Q  188 tatgattccagaagaaaaacgcatca-ttcattgtttataa 227  Q
     || |||  | ||||||||  ||||| ||||||||||||||    
T  27970296 catcattttataagaaaaa-acatcatttcattgtttataa 27970257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 36835694 - 36835579
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||||||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||  ||||||| |||    
T  36835694 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaat-catcatttcat 36835596  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  36835595 tgtttataaggatcata 36835579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 38971816 - 38971701
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  38971816 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacattatttcataagaaaaac-catcatttcat 38971718  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  38971717 tgtttataaggatcata 38971701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 39002914 - 39002799
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  39002914 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacattatttcataagaaaaac-catcatttcat 39002816  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  39002815 tgtttataaggatcata 39002799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 231
Target Start/End: Original strand, 39300110 - 39300249
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttatttgtcggcatttatattatagaaaatatg 191  Q
    |||| ||||||||||||  |||||||||| |||||||| ||| |||||  |||| | |||||||||  ||||| ||  |||||||||| || | |||||     
T  39300110 tgaggtgtaccggtactcttgcttcataattttataaattaatgatcattttttgtgaaataaataactatttatcaacatttatattttaaagaatatc 39300209  T
Q  192 attccagaagaaaaacgcatca-ttcattgtttataagaat 231  Q
    ||| || ||||||||  ||||| ||||||||||||||||||    
T  39300210 atttcataagaaaaa-acatcatttcattgtttataagaat 39300249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 239
Target Start/End: Complemental strand, 1043466 - 1043292
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt-ataaaataaatagttattt 164  Q
    |||||||||||||||  | ||  ||| |||| || || |||| | ||||||||||| |||||| | ||||||||| |||| ||  |||||||||||||||    
T  1043466 gggaacttctacggtacactcacaaagtgaggtgcactggtattcctgcttcataattttatatattaacgatcattttttatgtaataaatagttattt 1043367  T
Q  165 gtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cattgtttataagaatcatagtaa 239  Q
     ||   ||||||||| || | || || ||| || ||||||||  ||||||| |||||||||||||||| |||||||    
T  1043366 ttcaatatttatattttatagaacattatttcataagaaaaaa-catcatttcattgtttataagaattatagtaa 1043292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 3053147 - 3053084
Alignment:
Q  124 ttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||| ||||||||| |||||| ||||||| |||||||||||   ||||||||| |||||||    
T  3053147 ttataaattaacgatcatttttatgaaataaaaagttatttgtcaatatttatattttagaaaa 3053084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 187
Target Start/End: Original strand, 18844214 - 18844281
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||||| ||||||||| |||||| ||||||| || ||||||||   ||||||||| |||||||    
T  18844214 aaatttataaaataacgatcatttttatgaaataaaaagctatttgtcaatatttatattttagaaaa 18844281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 187
Target Start/End: Complemental strand, 37218985 - 37218887
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| ||||| | |||| |||||||||||||||||||| ||| |||  ||||||| || ||| | ||||||||||   ||||||||| |||||||    
T  37218985 taaattgaggtgtactgatactcctgcttcataaatttataaattaatgat-tattttatgaattaagttgttatttgtcaatatttatattttagaaaa 37218887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 239
Target Start/End: Original strand, 43841891 - 43842016
Alignment:
Q  114 cttcataaatttataaactaacgatcaatttt-ataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatc 212  Q
    |||||||| |||||||| ||||||||| |||| |||||||||||| |||||| ||   ||||||||| || | ||||| ||| || ||||||||  ||||    
T  43841891 cttcataattttataaattaacgatcattttttataaaataaataattatttatcaatatttatattttatagaatatcatttcataagaaaaa-acatc 43841989  T
Q  213 a-ttcattgtttataagaatcatagtaa 239  Q
    | || ||||||| |||||||||||||||    
T  43841990 agtttattgttt-taagaatcatagtaa 43842016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 12107507 - 12107604
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaa 186  Q
    ||||||||| |||||||||||| || ||||| ||||||||||  ||||| |  ||||||| | ||||| |||||||| |||  ||||||||| ||||||    
T  12107507 taaattgaggtgtaccggtactcctacttcaaaaatttataacttaacggt-tattttatgagataaagagttatttatcgatatttatattttagaaa 12107604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 40154813 - 40154717
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||  |||||| |||| |||||||||||||||||||| ||| |||| ||||||| ||| || | ||||||||||   ||||||||| |||||||    
T  40154813 aaattgaggcgtaccgatact-ctgcttcataaatttataaattaatgatc-attttatgaaagaagttgttatttgtcattatttatattttagaaaa 40154717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 231
Target Start/End: Complemental strand, 2165110 - 2164994
Alignment:
Q  115 ttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca- 213  Q
    |||||||||||||||  ||||||| | ||||||   ||||| || ||||| ||| | |||||||| |||||||||| || ||| ||||||||  |||||     
T  2165110 ttcataaatttataagttaacgataatttttatgtgataaagagatatttatcgacttttatattttagaaaatattatcccataagaaaaa-acatcat 2165012  T
Q  214 ttcattgtttataagaat 231  Q
    |||||| |||||||||||    
T  2165011 ttcattttttataagaat 2164994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 24937814 - 24937781
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  24937814 ttatcgctcataatagagaactttgattatttta 24937781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Original strand, 27172092 - 27172125
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  27172092 ttatcgctcataatagagaactttgattatttta 27172125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 253 - 285
Target Start/End: Original strand, 6630875 - 6630907
Alignment:
Q  253 tatcgctcataataaagaactttgattatttta 285  Q
    |||||||||||||| ||||||||||||||||||    
T  6630875 tatcgctcataatagagaactttgattatttta 6630907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 6804031 - 6804106
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttattt 164  Q
    ||||||||| ||||||||||||  || |||| ||||||||||  |||| ||| ||||||| ||||||| ||||||||    
T  6804031 taaattgaggtgtaccggtactcttgattcaaaaatttataatttaacaatc-attttatgaaataaaaagttattt 6804106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 129
Target Start/End: Original strand, 9712479 - 9712519
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataa 129  Q
    ||||| || ||||||||||||||||||||| ||||||||||    
T  9712479 aaattaaggtgtaccggtacttctgcttcaaaaatttataa 9712519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 28896974 - 28897073
Alignment:
Q  136 gatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cattgtttataagaatcat 234  Q
    ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| ||||||||||||| |||||    
T  28896974 gatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcattgtttataaggatcat 28897072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 235
Target Start/End: Original strand, 29039680 - 29039783
Alignment:
Q  132 taacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaa 230  Q
    ||||||||| |||||| ||||||| |||||||||||   ||||||||| |||||||  | ||  || ||||||||  ||||| ||||||||||||||| |    
T  29039680 taacgatcatttttatgaaataaaaagttatttgtcaatatttatattttagaaaacgtcatatcataagaaaaa-acatcatttcattgtttataagga 29039778  T
Q  231 tcata 235  Q
    |||||    
T  29039779 tcata 29039783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 239
Target Start/End: Original strand, 44000588 - 44000735
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt-ataaaataaatagttatttgtcggcatttatattatagaaaatatg 191  Q
    |||| |||| |||||||  | |||||||| |||||||| ||||||| | |||| || |||||||||  ||||| ||   ||||||||| || | || ||     
T  44000588 tgaggtgtatcggtactctttcttcataattttataaattaacgattattttttatgaaataaataactatttatcaatatttatattttatagaacatc 44000687  T
Q  192 attccagaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    ||| || ||||||||  ||||| ||||||||||||||||||||||||||    
T  44000688 atttcataagaaaaaa-catcagttcattgtttataagaatcatagtaa 44000735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 5e-59; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 64 - 239
Target Start/End: Original strand, 52024436 - 52024611
Alignment:
Q  64 aggggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatt 163  Q
    |||||||||||||| ||  | |||||||||||| ||||| ||||||  || ||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  52024436 aggggaacttctactgtacactcgtaaattgaggtgtacaggtactcttgtttcataaatctataaactaacgatcaattttatgaaataaatagttatt 52024535  T
Q  164 tgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    |||||||||||||||| |||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  52024536 tgtcggcatttatattttagaaaatatgatttcagaagaaaaatacatcattcattgtttataagaatcatagtaa 52024611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 85 - 239
Target Start/End: Complemental strand, 19914421 - 19914267
Alignment:
Q  85 tcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattataga 184  Q
    ||||||||| || ||||||||||||  |||||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  19914421 tcgtaaattaaggtgtaccggtactcttgcttcataaatctataaattaacgatcaattttatgaaataaatagttatttgtcggcatttatattttaga 19914322  T
Q  185 aaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  19914321 aaatatgatttcagaagaaaaatgcatcattcattgtttataagaatcatagtaa 19914267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 66 - 239
Target Start/End: Complemental strand, 9252259 - 9252089
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||||||||||||||  | |||||||||||| ||||||||||||  ||||||||| || |||||| |||||||||||||||| |||||||||||||||||    
T  9252259 gggaacttctacggtacactcgtaaattgaggtgtaccggtactcttgcttcatatatctataaattaacgatcaattttatgaaataaatagttatttg 9252160  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    ||||||   ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  9252159 tcggca---atattttagaaaatatgatttcagaagaaaaatgcatcattcattgtttataagaatcatagtaa 9252089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 66 - 239
Target Start/End: Original strand, 35748922 - 35749095
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    ||||||||||||| |  | |||||||| ||| |||| |||||||  |||||||||||| |||||| ||| |||||||||||| |||||||||||||||||    
T  35748922 gggaacttctacgatacactcgtaaatagaggtgtatcggtactcttgcttcataaatctataaattaatgatcaattttatcaaataaatagttatttg 35749021  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    |||||||||||||| || ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||    
T  35749022 tcggcatttatattttaaaaaatatgatttccgaagaaaaacgcatcattcattgtttataagaatcatagtaa 35749095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 66 - 239
Target Start/End: Complemental strand, 29806415 - 29806242
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||||||||||||||  | ||| |||||||| ||||||||||||  |||||| ||||| |||||| |||| || |||||||| ||||||||| |||||||    
T  29806415 gggaacttctacggtacactcgcaaattgaggtgtaccggtactcttgcttcctaaatctataaattaacaattaattttatgaaataaataattatttg 29806316  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
     | ||||||||||| |||||||||| ||| || ||||||||| |||||||||||||||||| ||||||||||||    
T  29806315 ccagcatttatattttagaaaatatcatttcataagaaaaacacatcattcattgtttatacgaatcatagtaa 29806242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 87 - 239
Target Start/End: Complemental strand, 8433811 - 8433660
Alignment:
Q  87 gtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaa 186  Q
    |||||||| | ||||||||||||  |||||| |||||||||||| |||| || |||||||| ||||||||||||||||||||||||||||||| ||||||    
T  8433811 gtaaattgtggtgtaccggtactcttgcttcttaaatttataaattaacaattaattttatgaaataaatagttatttgtcggcatttatattttagaaa 8433712  T
Q  187 atatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    || | ||  || || |||||| |||||||||||||||||||||||||||||||    
T  8433711 at-tcatgtcataataaaaacacatcattcattgtttataagaatcatagtaa 8433660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 239
Target Start/End: Original strand, 45635681 - 45635854
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||||||||||||||  | || |||||| |  ||||||||||| |||||||  |||||||||| | |||| ||||||| ||| |||||||||||||||||    
T  45635681 gggaacttctacggtacactcataaattaaagtgtaccggtacctctgctttctaaatttatacattaacaatcaattctatgaaataaatagttatttg 45635780  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    || ||||||||||   ||||||||| ||| || |||| |||| |||||||||||||||||||||||||||||||    
T  45635781 tcagcatttatatctcagaaaatatcatttcataagataaacacatcattcattgtttataagaatcatagtaa 45635854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 85 - 239
Target Start/End: Complemental strand, 52162770 - 52162615
Alignment:
Q  85 tcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattataga 184  Q
    ||||||||||   ||||||||||||  || ||| ||||| |||||| |||||||||||||||||||| |||||||||||| |||||||||||||| ||||    
T  52162770 tcgtaaattgcagtgtaccggtactcttgtttcctaaatctataaattaacgatcaattttataaaacaaatagttatttatcggcatttatattttaga 52162671  T
Q  185 aaatatgattccagaagaaaaacgcatcattcattg-tttataagaatcatagtaa 239  Q
    |||||| ||| || |||||||||   |||||||||| |||||||||||||||||||    
T  52162670 aaatataatttcataagaaaaacaagtcattcattgttttataagaatcatagtaa 52162615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 98 - 239
Target Start/End: Complemental strand, 23796151 - 23796010
Alignment:
Q  98 tgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattcca 197  Q
    ||||||||||||  | |||| ||||| |||||| |||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||| ||  ||    
T  23796151 tgtaccggtactcttacttcctaaatctataaattaacgatcaattttatgaaataaataattatttgtcggcatttatattttagaaaatatcatgtca 23796052  T
Q  198 gaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
     ||||||||  || |||||||||||||||| |||||||||||    
T  23796051 taagaaaaatacaacattcattgtttataaaaatcatagtaa 23796010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 8966337 - 8966177
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||||||||||||||  | || |||||| || |||||||||||| ||||||| |||||||||  | |||| ||||||||||| ||||||| |||||||||    
T  8966337 gggaacttctacggtacactcataaattaaggtgtaccggtactcctgcttcctaaatttatgcattaacaatcaattttatgaaataaaaagttatttg 8966238  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttata 226  Q
    ||||||||| |||   ||||||||| ||| || ||||||||| ||||||||||||||||||    
T  8966237 tcggcatttgtatctcagaaaatatcatttcataagaaaaacacatcattcattgtttata 8966177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 98 - 239
Target Start/End: Original strand, 54262576 - 54262717
Alignment:
Q  98 tgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattcca 197  Q
    ||||||| ||||  |||||| ||||| |||||| |||| ||||||||||| |||||||||||||||||| |||||||| ||| |||||||||| ||   |    
T  54262576 tgtaccgatactcttgcttcttaaatctataaattaacaatcaattttatgaaataaatagttatttgttggcatttagattttagaaaatatcatgtta 54262675  T
Q  198 gaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
     || |||||| |||||||||||||||||||||||||||||||    
T  54262676 taataaaaacacatcattcattgtttataagaatcatagtaa 54262717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 239
Target Start/End: Complemental strand, 5529100 - 5528927
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||| ||||||||||  | || |||| |||| ||||||||||||  | | ||  |||| |||||| ||| |||||||||||| ||||| |||||||||||    
T  5529100 gggagcttctacggtacactcttaaaatgaggtgtaccggtactcttccatcccaaatctataaattaatgatcaattttatgaaatagatagttatttg 5529001  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    |||  ||||||||| || ||||||| ||| || || |||||| |||||||||||||||||||||||||||||||    
T  5529000 tcgctatttatattttataaaatatcatttcataataaaaacacatcattcattgtttataagaatcatagtaa 5528927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 98 - 235
Target Start/End: Original strand, 50029783 - 50029921
Alignment:
Q  98 tgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatag-aaaatatgattcc 196  Q
    |||| ||||||| ||||||| |||||||||| | |||| ||||||||||| |||||||||||||||| || ||||||||||   || ||||||| ||| |    
T  50029783 tgtatcggtactcctgcttcctaaatttatacattaacaatcaattttatgaaataaatagttatttttccgcatttatatctcagaaaaatatcatttc 50029882  T
Q  197 agaagaaaaacgcatcattcattgtttataagaatcata 235  Q
    | ||||||||| ||||| ||||| |||||||||||||||    
T  50029883 ataagaaaaacacatcactcattatttataagaatcata 50029921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 66 - 239
Target Start/End: Original strand, 1129129 - 1129303
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttattt 164  Q
    |||||||||||||||  | ||  ||| |||| |||||||||||| ||||||||||| |||||||| |||||||||  ||||||  ||||||||| |||||    
T  1129129 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaatagctattt 1129228  T
Q  165 gtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    |||   ||||||||| || |||| || ||| || ||||||||  ||||| |||||||||||||||||| |||||||    
T  1129229 gtcaatatttatattttataaaacatcatttcataagaaaaa-acatcatttcattgtttataagaattatagtaa 1129303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 88 - 239
Target Start/End: Original strand, 26456975 - 26457128
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttatttgtcggcatttatattatagaaa 186  Q
    |||| |||| || ||||||||| ||||||||||| |||||||| |||||||||  ||||||  ||||||||| ||||||||   ||||||||| || | |    
T  26456975 taaagtgaggtgaaccggtactcctgcttcataattttataaattaacgatcattttttatgtaataaatagctatttgtcaatatttatattttataga 26457074  T
Q  187 atatgattccagaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    | || ||| || ||||||||  ||||| |||||||||||||||||| |||||||    
T  26457075 acatcatttcataagaaaaaaacatcatttcattgtttataagaattatagtaa 26457128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 186
Target Start/End: Original strand, 45602047 - 45602144
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaa 186  Q
    |||||||| |||| ||||| |  |||||| ||||| |||||| ||||||| |||||||| ||||||||||||||||| | ||||||||||| ||||||    
T  45602047 aaattgaggtgtatcggtattcttgcttcttaaatctataaattaacgattaattttatgaaataaatagttatttgccagcatttatattttagaaa 45602144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 29385065 - 29384966
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaat 188  Q
    |||||||| ||||||| |||| || || |||||||||||||| |||| ||| |||||||||||||| ||||||||||||    |||||||| ||||||||    
T  29385065 aaattgaggtgtaccgatactccttctacataaatttataaattaacaatc-attttataaaataagtagttatttgtcaatgtttatattttagaaaat 29384967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 50465824 - 50465709
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| ||||||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||| |||||    
T  50465824 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 50465726  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  50465725 tgtttataaggatcata 50465709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 187
Target Start/End: Complemental strand, 882076 - 882009
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||||| ||||||||| |||||||||||||| |||||||||||   ||||||||| |||||||    
T  882076 aaatttataaattaacgatcatttttataaaataaaaagttatttgtcaatatttatattttagaaaa 882009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 239
Target Start/End: Original strand, 4817103 - 4817250
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatga 192  Q
    |||| ||||||||||||  | ||| |||| |||||||| ||||||||| ||||||  ||||||||||||||| ||   ||||||||| || | || || |    
T  4817103 tgaggtgtaccggtactcttactttataattttataaattaacgatcatttttatgtaataaatagttatttatcaatatttatattttatagaacatca 4817202  T
Q  193 ttccagaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
     | || ||||||||  ||||| ||||||||||||| ||||||||||||    
T  4817203 attcataagaaaaaaacatcatttcattgtttatacgaatcatagtaa 4817250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 20199730 - 20199634
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| ||||||| |||| |||||||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  20199730 aaattgaggtgtaccgatact-ctgcttcataaatttataaattaaggatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 20199634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 24397766 - 24397670
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| ||||||| |||| |||||||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  24397766 aaattgaggtgtaccgatact-ctgcttcataaatttataaattaatgatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 24397670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 7157093 - 7157201
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| |||||| || ||| || ||||||| || ||||||||   ||||||||| |||||||||| ||| || ||||||||| ||||| |||||    
T  7157093 aaatttataaattaacgaccactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaatatcatttcataagaaaaac-catcatttcat 7157191  T
Q  219 tgtttataag 228  Q
    ||||||||||    
T  7157192 tgtttataag 7157201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 235
Target Start/End: Complemental strand, 19608675 - 19608527
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||| || ||||||| |||  ||| |||||||||  ||||  ||||||||| ||||||  || ||| || ||||||||| | |||||||| |||||||    
T  19608675 taaattaaggtgtaccgatacacctgtttcataaatcaataagttaacgatcatttttatgtaaaaaagagctatttgtcgacttttatattttagaaaa 19608576  T
Q  188 tatgattccagaagaaaaacgcatcatt-cattgtttataagaatcata 235  Q
    ||| ||| || ||||||||   |||||| |||||||||||| |||||||    
T  19608575 tattatttcataagaaaaaaatatcatttcattgtttataaaaatcata 19608527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 25834641 - 25834557
Alignment:
Q  61 aaaaggggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt 145  Q
    |||| |||||||||||||||  | || |||| ||||||||||||||||| ||||||||||| |  ||||| ||||||||| ||||    
T  25834641 aaaaagggaacttctacggtacactcataaagtgagatgtaccggtactcctgcttcataattaaataaattaacgatcattttt 25834557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 33830882 - 33830767
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  33830882 aaatatataaattaatgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 33830784  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||||||||||    
T  33830783 tgtttataagaatcata 33830767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 42622992 - 42622848
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaat 188  Q
    |||||||| ||||||||||||  |  |||||||||||||||| ||||||||  |||||| ||||||  || |||||||| | |||| |||| |||||||     
T  42622992 aaattgaggtgtaccggtactcttttttcataaatttataaattaacgatc--ttttatgaaataagaagctatttgtcagtatttgtattttagaaaac 42622895  T
Q  189 atgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    || ||| || ||||||||  ||| | ||||||||||| ||||||||||    
T  42622894 atcattgcataagaaaaa-acataatttcattgtttacaagaatcata 42622848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 45927572 - 45927457
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| ||||||||| ||| || ||||||| || ||||||||   ||||||||| || ||||||| ||| || ||||||||| ||||| |||||    
T  45927572 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttaaaaaatatcatttcataagaaaaac-catcatttcat 45927474  T
Q  219 tgtttataagaatcata 235  Q
    | |||||||| ||||||    
T  45927473 tctttataaggatcata 45927457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 40478164 - 40478085
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt 145  Q
    |||||||||||||||  | ||  ||| |||| |||||||||||| ||||||||||| |||||||| ||||||||| ||||    
T  40478164 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgatcattttt 40478085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 239
Target Start/End: Original strand, 42621848 - 42622022
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt-ataaaataaatagttattt 164  Q
    |||||||||||||||  | ||  ||| |||| |||||| |||||  |||||||||| |||||||| |||||| || |||| ||  |||||||||||||||    
T  42621848 gggaacttctacggtacactcacaaaatgaggtgtaccagtactcttgcttcataattttataaattaacgaccattttttatgtaataaatagttattt 42621947  T
Q  165 gtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    |||   ||||||||| || | || || ||| || ||||||||  ||||| ||||||||||| |||||| |||||||    
T  42621948 gtcaatatttatattttatagaacatcatttcataagaaaaa-acatcatttcattgtttacaagaattatagtaa 42622022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 25480322 - 25480399
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||||| |||||| |||||  | ||||||||||||||||  |||| |||| |||||||||||||| |||||||||||    
T  25480322 aaattgaggtgtaccagtactcttacttcataaatttataagttaacaatca-ttttataaaataaaaagttatttgtc 25480399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 39678486 - 39678412
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttatttgt 166  Q
    |||| |||| |||||||||||||| |||| |||||||| |||||||||  |||||| |||||||||| |||||||    
T  39678486 tgaggtgtatcggtacttctgctttataattttataaattaacgatcattttttatgaaataaatagctatttgt 39678412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 190
Target Start/End: Original strand, 52082045 - 52082167
Alignment:
Q  68 gaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||||||||||  |  || ||||| || ||||||||||||  | ||||| |||||||||||  ||| || | |||||| ||||||| ||||||||||     
T  52082045 gaacttctacggtacacccgcaaattaaggtgtaccggtactcttacttcaaaaatttataaatgaactattatttttatgaaataaaaagttatttgtt 52082144  T
Q  168 ggcatttatattatagaaaatat 190  Q
    |  ||||||||| ||||||||||    
T  52082145 gatatttatattttagaaaatat 52082167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 15804644 - 15804567
Alignment:
Q  90 aattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    ||||||| ||||||| |||| ||||| |||||||||||||| |||  |   ||||||| |||||||||||||||||||    
T  15804644 aattgaggtgtaccgatactcctgctacataaatttataaattaaaaaatcattttatgaaataaatagttatttgtc 15804567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 29491997 - 29491932
Alignment:
Q  99 gtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttatt 163  Q
    ||||||||||||||| ||||||| |||||||| |||||||||  ||||||| ||||||||| ||||    
T  29491997 gtaccggtacttctgtttcataattttataaattaacgatcattttttatataataaatagctatt 29491932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 32720338 - 32720222
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||||||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || || |||||  ||||||| |||    
T  32720338 aaatatataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataaaaaaaaaccatcatttcat 32720239  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  32720238 tgtttataaggatcata 32720222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 35320415 - 35320530
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| |||| |||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||| | |||||    
T  35320415 aaatttataaattaacaatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-cattatttcat 35320513  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  35320514 tgtttataaggatcata 35320530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 239
Target Start/End: Original strand, 35389318 - 35389465
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt-ataaaataaatagttatttgtcggcatttatattatagaaaatatg 191  Q
    |||| ||||||| ||||  | |||||||| |||||||| ||||||||  |||| || ||||||||| |||||| ||   ||||||||| || | || ||     
T  35389318 tgaggtgtaccgatactctttcttcataattttataaattaacgatcgttttttatgaaataaataattatttatcaatatttatattttatagaacatc 35389417  T
Q  192 attccagaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    |||| | ||||||||  ||||| ||||||||||||||||||||||||||    
T  35389418 attc-ataagaaaaaaacatcagttcattgtttataagaatcatagtaa 35389465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 223
Target Start/End: Original strand, 42657835 - 42657971
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||||||| |  |||||  |||||| ||| | |||||| ||| |||||||||||  | ||||| |||||||| | |||||||||||| |||||||    
T  42657835 taaattgagatgttcttgtactcttgcttcctaattctataaattaatgatcaattttaagatataaagagttatttattggcatttatattttagaaaa 42657934  T
Q  188 tatgattccagaagaa-aaacgcatcattcattgttt 223  Q
     || ||| || |||||  ||  |||||||||||||||    
T  42657935 catcatttcataagaaccaaaacatcattcattgttt 42657971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 51235873 - 51235758
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  51235873 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 51235775  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  51235774 tgtttataaggatcata 51235758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 204
Target Start/End: Complemental strand, 52038464 - 52038348
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||||||||  |||||||  | |||| ||| | |||||| ||| |||||||||||| | ||||| |||||||| | | |||||||||| |||||||    
T  52038464 taaattgagatgtttcggtactcttacttcctaattctataaagtaatgatcaattttatgatataaagagttatttattgacatttatattttagaaaa 52038365  T
Q  188 tatgattccagaagaaa 204  Q
     || ||| || ||||||    
T  52038364 cattatttcataagaaa 52038348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 235
Target Start/End: Original strand, 52178975 - 52179123
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||| || ||||||||||| | || |||||||||  ||||  ||||||||| ||||||  || ||| || ||||| ||| | |||||||| |||||||    
T  52178975 taaattaaggtgtaccggtacatttgtttcataaatcaataagttaacgatcatttttatgtaaaaaagagctatttatcgacttttatattttagaaaa 52179074  T
Q  188 tatgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    ||| ||| || || |||||   |||| |||||| |||||||||||||||    
T  52179075 tattatttcataaaaaaaatatatcatttcattttttataagaatcata 52179123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 167
Target Start/End: Complemental strand, 7862824 - 7862749
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttatttgtc 167  Q
    |||| |||||||||||| ||||||||||| |||||||| ||||||| |  ||||||  ||||||||| ||||||||    
T  7862824 tgaggtgtaccggtactcctgcttcataattttataaattaacgataattttttatgtaataaatagctatttgtc 7862749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 26409685 - 26409732
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    ||||||||||| ||||||||| |||||| ||||||| |||||||||||    
T  26409685 aaatttataaattaacgatcatttttatgaaataaaaagttatttgtc 26409732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 239
Target Start/End: Original strand, 39252922 - 39253064
Alignment:
Q  98 tgtaccggtacttctgcttcataaatttataaactaacgatcaatttt-ataaaataaatagttatttgtcggcatttatattatagaaaatatgattcc 196  Q
    ||||||||||||| |  ||||||| |||||||| |||| || | |||| ||  ||||||||| ||||||||   ||||||||| || |||| || ||| |    
T  39252922 tgtaccggtacttttatttcataattttataaattaacaattattttttatgtaataaatagctatttgtcaatatttatattttataaaacatcatttc 39253021  T
Q  197 agaagaaaaacgcatcatt-cattgtttataagaatcatagtaa 239  Q
    | ||||||||  ||||||| |||||||||||||||| |||||||    
T  39253022 ataagaaaaaa-catcatttcattgtttataagaattatagtaa 39253064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 44379414 - 44379485
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacga 137  Q
    |||||||||||||||  | ||  ||| |||| |||||||||||| ||||||||||| |||||||| ||||||    
T  44379414 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacga 44379485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 239
Target Start/End: Original strand, 50412098 - 50412244
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatga 192  Q
    |||| |||| |||||||  | |||||||| |||||||| ||| |||   |||||| || |||||| |||||| ||   ||||||||| || | ||||| |    
T  50412098 tgaggtgtatcggtactctttcttcataattttataaattaatgatattttttatgaattaaataattatttatcaatatttatattttatagaatatca 50412197  T
Q  193 ttccagaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    || || ||||||||  ||||| ||||||||||||||||||||||||||    
T  50412198 tttcataagaaaaaa-catcagttcattgtttataagaatcatagtaa 50412244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 239
Target Start/End: Complemental strand, 51344746 - 51344605
Alignment:
Q  98 tgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttatttgtcggcatttatattatagaaaatatgattcc 196  Q
    |||||||||||| ||||||||||| ||||| || |||||||||  ||||||  ||||||||| ||||||||   ||||||||| || | || || ||  |    
T  51344746 tgtaccggtactcctgcttcataattttat-aattaacgatcattttttatgtaataaatagctatttgtcaaaatttatattttatagaacatcatctc 51344648  T
Q  197 agaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    | ||||||||  ||||| |||||||||||||||||| |||||||    
T  51344647 ataagaaaaa-acatcatttcattgtttataagaattatagtaa 51344605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 4521293 - 4521389
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| ||||||| |||| ||| |||||||||||||||| ||| |||| ||||||| | |||| | ||||||||||   ||||||||| |||||||    
T  4521293 aaattgaggtgtaccgatact-ctgtttcataaatttataaattaatgatc-attttatgagataagttgttatttgtcattatttatattttagaaaa 4521389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 29815511 - 29815414
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| ||||||| | || |||||||||||||||||||| |||  ||| ||||||| || ||| | ||||||||||   ||||||||| |||||||    
T  29815511 aaattgaggtgtaccgatgctcctgcttcataaatttataaattaattatc-attttattaattaagttgttatttgtcaatatttatattttagaaaa 29815414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 35375535 - 35375613
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||||| |||| |||||||  || |||||||||||||||| |||| |||| || ||| ||||||| || ||||||||    
T  35375535 aaattgaggtgtatcggtactcttgattcataaatttataaattaacaatcatttatattaaataaagagctatttgtc 35375613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 51996443 - 51996520
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||||| ||||||| |||| || || |||||||||||||| |||| ||| ||||||| |||||| ||||||| ||||    
T  51996443 aaattgaggtgtaccgatactcctactacataaatttataaattaacaatc-attttatgaaataagtagttatgtgtc 51996520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 231
Target Start/End: Complemental strand, 54911102 - 54910989
Alignment:
Q  118 ataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttc 216  Q
    ||||||||||||| ||||||| | ||||||   ||||| || ||||| ||| | |||||||| |||||||||| || ||| ||||||||  ||||| |||    
T  54911102 ataaatttataaattaacgataatttttatgtgataaagagatatttatcgacttttatattttagaaaatattatcccataagaaaaa-acatcatttc 54911004  T
Q  217 attgtttataagaat 231  Q
    ||| |||||||||||    
T  54911003 attttttataagaat 54910989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Original strand, 8966094 - 8966127
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  8966094 ttatcgctcataatagagaactttgattatttta 8966127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Original strand, 23795956 - 23795989
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  23795956 ttatcgctcataatagagaactttgattatttta 23795989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 189
Target Start/End: Original strand, 36789910 - 36790009
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||  ||||||| |||| |||||||||||||||||||| ||| |||| ||||| | |||||| | ||||||| ||   ||||||||| |||||||    
T  36789910 taaattgatgtgtaccgatact-ctgcttcataaatttataaattaatgatc-attttttgaaataagttgttatttatcattatttatattttagaaaa 36790007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 239
Target Start/End: Original strand, 40784575 - 40784699
Alignment:
Q  116 tcataaatttataaactaacgatcaatttt-ataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca- 213  Q
    |||||| |||||||  ||||||||| |||| ||  ||||||||||||||||||   ||||||||| || | || || ||| || |||||| |  |||||     
T  40784575 tcataattttataagttaacgatcattttttatgtaataaatagttatttgtcaatatttatattttatagaacattatttcataagaaaga-acatcat 40784673  T
Q  214 ttcattgtttataagaatcatagtaa 239  Q
    ||||||||||||||||||||||||||    
T  40784674 ttcattgtttataagaatcatagtaa 40784699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 130
Target Start/End: Original strand, 43745373 - 43745410
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaa 130  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  43745373 tgaggtgtaccggtacttctgcttcataattttataaa 43745410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 45635910 - 45635877
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  45635910 ttatcgctcataatagagaactttgattatttta 45635877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 50029980 - 50029947
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  50029980 ttatcgctcataatagagaactttgattatttta 50029947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 15298235 - 15298376
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| ||||| ||||||  | ||||| ||||||||||  ||||||| | |||||||||||||| |||||||  ||   ||||||||| |||||||    
T  15298235 taaattgaggtgtactggtactcttacttca-aaatttataatttaacgatta-ttttataaaataaagagttattcatcaatatttatattttagaaaa 15298332  T
Q  188 tatgattccagaagaaaaacgcatca-ttcattgtttataagaat 231  Q
     || |||  | ||||||||  ||||| ||||||||||||||||||    
T  15298333 catcattttataagaaaaa-acatcatttcattgtttataagaat 15298376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 145
Target Start/End: Original strand, 37127807 - 37127882
Alignment:
Q  69 aacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt 145  Q
    ||||||||||||  | || |||| |||| |||||| ||||| ||||||||||| |||||||| ||||||||| ||||    
T  37127807 aacttctacggtacactcataaaatgaggtgtaccagtact-ctgcttcataattttataaattaacgatcattttt 37127882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 157
Target Start/End: Original strand, 37520702 - 37520794
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaata 157  Q
    |||||||||||||||  | ||  ||| |||| ||||||||||||  | |||||||| |||||||| |||||||||  |||||| |||||||||    
T  37520702 gggaacttctacggtacactcacaaaatgaggtgtaccggtactctttcttcataattttataaattaacgatcattttttatgaaataaata 37520794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 44962956 - 44962840
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || || |||||  ||||||| |||    
T  44962956 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataaaaaaaaaccatcatttcat 44962857  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  44962856 tgtttataaggatcata 44962840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 48925466 - 48925581
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| || || ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  48925466 aaatatataaattaaagaccactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 48925564  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  48925565 tgtttataaggatcata 48925581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 52782214 - 52782329
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||| | ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  52782214 aaatatataaattaaagattactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 52782312  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  52782313 tgtttataaggatcata 52782329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 53376943 - 53376828
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||  ||||||| |||    
T  53376943 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaat-catcatttcat 53376845  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  53376844 tgtttataaggatcata 53376828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 3e-51; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 85 - 235
Target Start/End: Original strand, 4114682 - 4114831
Alignment:
Q  85 tcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattataga 184  Q
    |||||||||  | |||| ||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||    
T  4114682 tcgtaaattcgggtgtaacggtact-ctgcttcataaatctataaactaacgatcaattttatgaaataaatagttatttatcggcatttatattttaga 4114780  T
Q  185 aaatatgattccagaagaaaaacgcatcattcattgtttataagaatcata 235  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  4114781 aaatataatttcagaagaaaaacgcatcattcattgtttataagaatcata 4114831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 85 - 239
Target Start/End: Original strand, 16114483 - 16114637
Alignment:
Q  85 tcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattataga 184  Q
    |||||||||||| ||||||||||||  || | ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||||| || |    
T  16114483 tcgtaaattgaggtgtaccggtactcttgttccataaatctataaactaacgatcaattttatgaaataaatagttatttgtcggcctttatattttaaa 16114582  T
Q  185 aaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    |||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||    
T  16114583 aaatatgatttcagaagaaaaatgcatcattccttgtttataagaatcatagtaa 16114637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 87 - 239
Target Start/End: Complemental strand, 14947549 - 14947397
Alignment:
Q  87 gtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaa 186  Q
    |||||||||| ||||| ||||||  ||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||| ||||||    
T  14947549 gtaaattgaggtgtactggtactcttgctttataaatttataaactaacgatcaattttatgaaataaataattatttgtcagcatttatattttagaaa 14947450  T
Q  187 atatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    |||| ||| || ||||||||||||||||| ||||||||||||||| |||||||    
T  14947449 atataatttcaaaagaaaaacgcatcattaattgtttataagaattatagtaa 14947397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 98 - 239
Target Start/End: Original strand, 10456079 - 10456220
Alignment:
Q  98 tgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattc-c 196  Q
    |||||||||| || | |||| ||||| |||||| |||| ||||||||||| |||||||||||||||| |||||||||||||| |||||||||| |||| |    
T  10456079 tgtaccggtatttttacttcctaaatctataaattaactatcaattttatgaaataaatagttatttatcggcatttatattttagaaaatat-attctc 10456177  T
Q  197 agaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    | ||||||||| |||||||||||||||||||||||||||||||    
T  10456178 ataagaaaaacacatcattcattgtttataagaatcatagtaa 10456220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 38617728 - 38617896
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    ||||||||| |||||  | |||||||||||| ||||||||||||  |||||| ||||| |||||| |||| || |||||||| |||||| ||||||||||    
T  38617728 gggaacttcaacggtacactcgtaaattgaggtgtaccggtactcttgcttcgtaaatctataaattaacaattaattttatgaaataa-tagttatttg 38617826  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcata 235  Q
    ||| ||||||| || |||||||||| ||| || ||||||||| |||||||||||||||||| ||||||||    
T  38617827 tcgtcatttatgttttagaaaatatcatttcataagaaaaacacatcattcattgtttatacgaatcata 38617896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 66 - 227
Target Start/End: Complemental strand, 33494342 - 33494178
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgag--atgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatt 163  Q
    |||||||||||||||  | ||||||||||||  ||||| |||||||  |||||| | |||||||||| |||||||||||||||| | ||||| |||||||    
T  33494342 gggaacttctacggtacactcgtaaattgaggtatgtatcggtactcttgcttctttaatttataaattaacgatcaattttatgatataaagagttatt 33494243  T
Q  164 tgtcggcatttatattatagaaaatatgattccagaag-aaaaacgcatcattcattgtttataa 227  Q
    |||||||||||||||| |||||||||| ||| || ||| |||||  |||||||||||||||||||    
T  33494242 tgtcggcatttatattttagaaaatatcatttcataagaaaaaaaacatcattcattgtttataa 33494178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 67 - 235
Target Start/End: Complemental strand, 17821927 - 17821759
Alignment:
Q  67 ggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgt 166  Q
    ||||||||||| ||  | || |||||| || ||||  ||||||  |||||| |||||||||  | |||| ||||||||||| ||||||| |||||||| |    
T  17821927 ggaacttctactgtacactcataaattaaggtgtattggtactcttgcttcctaaatttatgcattaacaatcaattttatgaaataaaaagttatttct 17821828  T
Q  167 cggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcata 235  Q
    |||||||| |||   ||||||||| ||| || ||||||||| || |||||||||||||||||| |||||    
T  17821827 cggcatttgtatctaagaaaatatcatttcataagaaaaacacaacattcattgtttataagagtcata 17821759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 239
Target Start/End: Original strand, 16637073 - 16637200
Alignment:
Q  110 tctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgc 209  Q
    |||| ||| ||||| || ||| ||||||| |||||||| ||||||| |||||||||| |||||||||||| | |||||||| |||  | ||||||||  |    
T  16637073 tctgtttcctaaatctacaaattaacgattaattttatgaaataaagagttatttgttggcatttatatttttgaaaatatcatt-tataagaaaaa-ac 16637170  T
Q  210 atcattcattgtttataagaatcatagtaa 239  Q
    |||||||||||||||||| |||||||||||    
T  16637171 atcattcattgtttataaaaatcatagtaa 16637200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 6438172 - 6438342
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    |||||||||||||||  |  |||||||| || ||| ||||||||  |  |||| ||||||||||| |||| || | |||||| ||||||| || ||||||    
T  6438172 gggaacttctacggtaaatccgtaaattaaggtgtgccggtactcttaattcaaaaatttataaattaactataatttttatgaaataaaaagctatttg 6438271  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    | |  ||||||||| |||||||||| ||| || ||||||||  ||||| |||||||||||||| |||||||    
T  6438272 ttgatatttatattttagaaaatatcatttcataagaaaaaaacatcatttcattgtttataaaaatcata 6438342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 2283212 - 2283334
Alignment:
Q  112 tgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcat 211  Q
    ||||||||||||||||||| |||||||  ||||||| |||||||||| ||||||||   ||||||||| ||||||| || ||| || ||||||||  | |    
T  2283212 tgcttcataaatttataaattaacgat-tattttatgaaataaatagctatttgtcaatatttatattttagaaaacatcatttcacaagaaaaa-acgt 2283309  T
Q  212 ca-ttcattgtttataagaatcata 235  Q
    || ||||||||||||||||||||||    
T  2283310 catttcattgtttataagaatcata 2283334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 235
Target Start/End: Complemental strand, 22595120 - 22594973
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||| || ||||||||||| |||| |||||||||  ||||  ||||||||| ||||||  || ||| || ||||||||| | |||||||| |||||||    
T  22595120 taaattaaggtgtaccggtacatctgtttcataaatcaataagttaacgatcatttttatgtaaaaaaaagctatttgtcgacttttatattttagaaaa 22595021  T
Q  188 tatgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    ||| ||| || ||||||||   |||| ||||||||||||||||||||||    
T  22595020 tattatttcataagaaaaa-atatcatttcattgtttataagaatcata 22594973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 66 - 235
Target Start/End: Original strand, 19268566 - 19268734
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttg 165  Q
    ||||||||||| ||| || ||  |||||||| |||| | ||| |  || |||||||||||| ||| ||||||||| |||||| ||||||| || ||||||    
T  19268566 gggaacttctatggtatactcacaaattgaggtgtatcagtattattgtttcataaatttacaaattaacgatcatttttatgaaataaagagctatttg 19268665  T
Q  166 tcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    |||  ||||||||| |||||||||| ||| ||  | |||||  ||||| |||||||||| |||||||||||    
T  19268666 tcgatatttatattttagaaaatattatttcattaaaaaaa--catcatttcattgtttgtaagaatcata 19268734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 167
Target Start/End: Original strand, 38073130 - 38073207
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||||||| ||||||||||||  | ||||||||||||||||| |||||||| ||||||| |||||||||| ||||||||    
T  38073130 aaattgaggtgtaccggtactcttacttcataaatttataaattaacgatc-attttatgaaataaatagatatttgtc 38073207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 25740399 - 25740224
Alignment:
Q  60 taaaaggggaacttctacggtgta-atcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatag 158  Q
    ||||| ||||||||||||||| ||  || ||||||||| ||||||| ||||  || |||||||| ||||||| || ||||| ||||||| ||||||| ||    
T  25740399 taaaacgggaacttctacggtatacctcataaattgaggtgtaccgatactcttgtttcataaaattataaattaccgatc-attttatgaaataaaaag 25740301  T
Q  159 ttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
     ||||||||   ||||||||| ||||||| || ||| || | ||||||  | ||| ||||||||||||||||||||||    
T  25740300 ctatttgtcaatatttatattttagaaaacattatttcataggaaaaa-acgtcatttcattgtttataagaatcata 25740224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 42640874 - 42641019
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaat 188  Q
    |||||||| | ||||||||||  | ||||||||||||||||| |||||||| ||||||| |||||||||| ||||||||   | ||||||| |||||||     
T  42640874 aaattgaggtataccggtactcttacttcataaatttataaattaacgatc-attttatgaaataaataggtatttgtcaata-ttatattttagaaaac 42640971  T
Q  189 atgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    || ||| || ||||||||  | ||| |||| | |||||||||||||||    
T  42640972 atcatttcataagaaaaaaacttcatttcaatatttataagaatcata 42641019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 2307323 - 2307416
Alignment:
Q  112 tgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaa 206  Q
    ||||||||||||||||||| ||||||| | ||||| ||||||||||||| ||||||   ||||||||| ||||||| || ||| || ||||||||    
T  2307323 tgcttcataaatttataaattaacgatta-ttttaaaaaataaatagttgtttgtcaatatttatattttagaaaacatcatttcacaagaaaaa 2307416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 6657797 - 6657689
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| ||||||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||| |||||    
T  6657797 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 6657699  T
Q  219 tgtttataag 228  Q
    ||||||||||    
T  6657698 tgtttataag 6657689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 7504077 - 7504185
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| ||||||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||| |||||    
T  7504077 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 7504175  T
Q  219 tgtttataag 228  Q
    ||||||||||    
T  7504176 tgtttataag 7504185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 26738384 - 26738276
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| ||||||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||| |||||    
T  26738384 aaatttataaattaacgatcattttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 26738286  T
Q  219 tgtttataag 228  Q
    ||||||||||    
T  26738285 tgtttataag 26738276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 5084894 - 5085009
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| |||||||||| ||| || ||||||||| ||||||| |||    
T  5084894 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaatatcatttcataagaaaaac-catcatttcat 5084992  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  5084993 tgtttataaggatcata 5085009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 16814906 - 16815021
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| |||||||||| ||| || ||||||||| ||||||| |||    
T  16814906 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaatatcatttcataagaaaaac-catcatttcat 16815004  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  16815005 tgtttataaggatcata 16815021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 16854186 - 16854301
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| |||||||||| ||| || ||||||||| ||||||| |||    
T  16854186 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaatatcatttcataagaaaaac-catcatttcat 16854284  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  16854285 tgtttataaggatcata 16854301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 18576355 - 18576470
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  18576355 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 18576453  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||||||||||    
T  18576454 tgtttataagaatcata 18576470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 37725903 - 37725788
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||||||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  37725903 aaatatataaactaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 37725805  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  37725804 tgtttataaggatcata 37725788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 235
Target Start/End: Original strand, 2316870 - 2317008
Alignment:
Q  98 tgtaccggtacttctgcttcataaatt-tataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattcc 196  Q
    ||||||||||||  || |||||||| | |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| |    
T  2316870 tgtaccggtactcttgtttcataaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttc 2316969  T
Q  197 agaagaaaaacgcatcatt-cattgtttataagaatcata 235  Q
    | ||||||||| ||||||| ||||||||||||| ||||||    
T  2316970 ataagaaaaac-catcatttcattgtttataaggatcata 2317008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 124 - 235
Target Start/End: Complemental strand, 21425557 - 21425446
Alignment:
Q  124 ttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgttt 223  Q
    ||||||| ||||||||| |||| | ||||||| |||||||||||   ||||||||| |||||||  | ||  || ||||||||  |||||||||||||||    
T  21425557 ttataaattaacgatcatttttgtgaaataaaaagttatttgtcaatatttatattttagaaaacgtcatatcataagaaaaaaacatcattcattgttt 21425458  T
Q  224 ataagaatcata 235  Q
    | ||| ||||||    
T  21425457 acaaggatcata 21425446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 66 - 239
Target Start/End: Original strand, 35895311 - 35895485
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttattt 164  Q
    |||||||| ||||||  | || |||| |||| |||||||||||| ||||||||||| |||||||| |||||| ||  ||||||  ||||||||  |||||    
T  35895311 gggaacttttacggtacactcataaagtgaggtgtaccggtactcctgcttcataattttataaattaacgaccattttttatgtaataaataactattt 35895410  T
Q  165 gtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    |||   ||||||||| || | || || ||| || ||||||||   |||| |||||||||||||||||| |||||||    
T  35895411 gtcaatatttatattttatagaacatcatttcataagaaaaa-atatcatttcattgtttataagaattatagtaa 35895485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 98 - 235
Target Start/End: Complemental strand, 40533626 - 40533488
Alignment:
Q  98 tgtaccggtacttctgcttcataaatt-tataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattcc 196  Q
    ||||||||||||  || |||||||| | |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| |    
T  40533626 tgtaccggtactcttgtttcataaaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttc 40533527  T
Q  197 agaagaaaaacgcatcatt-cattgtttataagaatcata 235  Q
    | ||||||||| ||||||| ||||||||||||| ||||||    
T  40533526 ataagaaaaac-catcatttcattgtttataaggatcata 40533488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 187
Target Start/End: Original strand, 8504056 - 8504148
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||| ||||||| |||| |||||||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  8504056 tgaggtgtaccgatact-ctgcttcataaatttataaattaatgatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 8504148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 28318065 - 28318161
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| ||||||| |||| ||| |||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  28318065 aaattgaggtgtaccgatact-ctgtttcataaatttataaattaatgatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 28318161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 187
Target Start/End: Original strand, 25712751 - 25712839
Alignment:
Q  98 tgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||| ||||||| ||||| ||||||||||  ||||||| | |||||||||||||| |||||||| ||   ||||||||| |||||||    
T  25712751 tgtaccgatacttctacttcaaaaatttataatttaacgatta-ttttataaaataaagagttatttatcaatatttatattttagaaaa 25712839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 39878974 - 39879082
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| ||||||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||| |||||    
T  39878974 aaatttataaattaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 39879072  T
Q  219 tgtttataag 228  Q
    | ||||||||    
T  39879073 tatttataag 39879082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 239
Target Start/End: Original strand, 40946764 - 40946936
Alignment:
Q  68 gaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttatttgt 166  Q
    |||||||||||||  | || |||| || | ||||||||||||  | |||||||| |||||||| |||||||||  ||||||  ||||||||| ||||| |    
T  40946764 gaacttctacggtacactcataaagtgggttgtaccggtactattacttcataattttataaattaacgatcattttttatgtaataaatagctattttt 40946863  T
Q  167 cggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcatagtaa 239  Q
    |   ||||||||| || | || || ||| || ||||||||  ||||| |||||||||||||||||| |||||||    
T  40946864 caatatttatattttatagaacattatttcataagaaaaa-acatcatttcattgtttataagaattatagtaa 40946936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 231
Target Start/End: Complemental strand, 12071537 - 12071396
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| |||||||||||| || ||||| |||||||| || |||||||  ||||||| || |||| |||||||| ||   ||||||||| |||||||    
T  12071537 taaattgaggtgtaccggtactcctacttcaaaaatttat-aattaacgat-tattttatgaagtaaagagttatttatcaatatttatattttagaaaa 12071440  T
Q  188 tatgattccagaagaaaaacgcatca-ttcattgtttataagaat 231  Q
     || |||  | ||||||||  ||||| ||||||||||||||||||    
T  12071439 catcattttataagaaaaa-acatcatttcattgtttataagaat 12071396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 15362492 - 15362567
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttattt 164  Q
    ||||||||| |||||||||||| |||||||| | ||||||||  |||||||  ||||||| ||||||| ||||||||    
T  15362492 taaattgaggtgtaccggtactcctgcttcaaatatttataatttaacgat-tattttatgaaataaagagttattt 15362567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 36049519 - 36049634
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| |||  |||| ||| || ||||||| || ||||||||   ||||||||| |||||||||| ||| || ||||||||| ||| | |||||    
T  36049519 aaatttataaattaataatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaatatcatttcataagaaaaac-cattatttcat 36049617  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  36049618 tgtttataaggatcata 36049634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 36192025 - 36192140
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  36192025 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 36192123  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  36192124 tgtttataaggatcata 36192140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 15205766 - 15205911
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaat 188  Q
    |||||||| ||||  |||| | || |||| |||||||||||| |||||||| ||||||| || |||| || ||||||||    |||||||| |||||||     
T  15205766 aaattgaggtgtagaggtaatcctacttcgtaaatttataaattaacgatc-attttatgaagtaaagaggtatttgtcaatgtttatattttagaaaac 15205864  T
Q  189 atgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    || ||| || ||||||||   |||| ||||||||||||||||||||||    
T  15205865 atcatttcataagaaaaa-atatcatttcattgtttataagaatcata 15205911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 187
Target Start/End: Complemental strand, 44068364 - 44068298
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||||| ||||||||| |||||||||||||| ||||| |||||   ||||||||| |||||||    
T  44068364 aaatttataaattaacgatcatttttataaaataaa-agttagttgtcaatatttatattttagaaaa 44068298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 167
Target Start/End: Complemental strand, 4108665 - 4108612
Alignment:
Q  113 gcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtc 167  Q
    |||| ||||||||||||| ||| ||||| ||||||||||||||| ||||||||||    
T  4108665 gctttataaatttataaattaatgatca-ttttataaaataaattgttatttgtc 4108612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 7069576 - 7069480
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| ||||||  ||||| | ||||||||||||||||| ||| |||| ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  7069576 aaattgaggtgtacccatactt-tacttcataaatttataaattaatgatc-attttatgaaataagttgttatttgtcattatttatattttagaaaa 7069480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 7366884 - 7366788
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    |||||||| |||||||  ||| |||||||||||||||||||| ||| |||| ||||||| |||||| | ||||||| ||   ||||||||| |||||||    
T  7366884 aaattgaggtgtaccgaaact-ctgcttcataaatttataaattaatgatc-attttatgaaataagttgttatttatcattatttatattttagaaaa 7366788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 130
Target Start/End: Complemental strand, 16719019 - 16718978
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaa 130  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  16719019 taaattgagatgtaccgatact-ctgcttcataaatttataaa 16718978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 235
Target Start/End: Original strand, 22622459 - 22622588
Alignment:
Q  106 tacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaa 205  Q
    |||| |||||||| ||||| ||||  ||| ||||| |||||| ||||||| |||||||| ||   ||||||||| || |||| || |||  | |||||||    
T  22622459 tactcctgcttcaaaaattgataatttaaagatca-ttttatgaaataaagagttatttatcaatatttatattttataaaacatcattttataagaaaa 22622557  T
Q  206 acgcatcatt-cattgtttataagaatcata 235  Q
    |  ||||||| ||||||||||||||||||||    
T  22622558 aaacatcatttcattgtttataagaatcata 22622588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Complemental strand, 4114890 - 4114857
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  4114890 ttatcgctcataatagagaactttgattatttta 4114857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 285
Target Start/End: Original strand, 17821700 - 17821733
Alignment:
Q  252 ttatcgctcataataaagaactttgattatttta 285  Q
    ||||||||||||||| ||||||||||||||||||    
T  17821700 ttatcgctcataatagagaactttgattatttta 17821733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 41840006 - 41839898
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcat 218  Q
    ||||||||||| ||||||||| ||| || ||||||| || ||||| ||   ||||||||| ||||||| || ||| || ||||||||| ||||| |||||    
T  41840006 aaatttataaattaacgatcactttaatgaaataaaaaggtatttatcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 41839908  T
Q  219 tgtttataag 228  Q
    | ||||||||    
T  41839907 tatttataag 41839898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 190
Target Start/End: Original strand, 45690523 - 45690623
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaat 188  Q
    |||||||| ||||||||||||   |||  ||||||||||||| ||| |||| ||||||| ||||||| || |||| |||   ||||||||| ||||||||    
T  45690523 aaattgaggtgtaccggtactctcgctctataaatttataaattaaggatc-attttatgaaataaaaagctattagtcaatatttatattttagaaaat 45690621  T
Q  189 at 190  Q
    ||    
T  45690622 at 45690623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 235
Target Start/End: Original strand, 1580274 - 1580417
Alignment:
Q  93 tgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttatttgtcggcatttatattatagaaaatatg 191  Q
    |||| ||||||||||||  |||||||||| ||||| || ||||||| |  ||||||  ||||||||| ||||||||   ||||||||| || | || ||     
T  1580274 tgaggtgtaccggtactcttgcttcataattttatgaattaacgataattttttatgtaataaatagctatttgtcaatatttatattttatagaacatc 1580373  T
Q  192 attccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    ||| || ||||||||  ||| | ||||||||||||||||||||||    
T  1580374 atttcataagaaaaa-acattatttcattgtttataagaatcata 1580417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 3261317 - 3261233
Alignment:
Q  61 aaaaggggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt 145  Q
    |||| |||||||||||||||  | || |||| |||||||||||||||||   ||||||| | |||| ||| ||||||||| ||||    
T  3261317 aaaaagggaacttctacggtacattcataaagtgagatgtaccggtactctcgcttcatgattttacaaattaacgatcattttt 3261233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 231
Target Start/End: Complemental strand, 5615767 - 5615624
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| |||| |||||||  | |||| |||||||||||| |||| | | |||| |||||||||| || ||||||     ||||||||| |||||||    
T  5615767 taaattgaggtgtatcggtactcttacttcttaaatttataaattaacta-ccatttcataaaataaaaagctatttgataatatttatattttagaaaa 5615669  T
Q  188 tatgattccagaagaaaaacgcatca-ttcattgtttataagaat 231  Q
     || ||| || | ||||||  ||||| ||||||||||||||||||    
T  5615668 cataatttcataggaaaaaaacatcatttcattgtttataagaat 5615624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 8362424 - 8362567
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| ||||| |||||| ||  |||| ||||||||||  ||||||| | |||||| ||||||| | |||||  ||   ||||||||| |||||||    
T  8362424 taaattgaggtgtactggtactcctatttcaaaaatttataatttaacgatta-ttttatgaaataaagacttattcatcaatatttatattttagaaaa 8362522  T
Q  188 tatgattccagaagaaaaacgcatcatt-cattgtttataagaat 231  Q
     || |||  | ||||||||  ||||||| ||||||||||||||||    
T  8362523 catcattttataagaaaaaaacatcatttcattgtttataagaat 8362567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 206
Target Start/End: Complemental strand, 12547725 - 12547633
Alignment:
Q  114 cttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaa 206  Q
    ||||| ||||||||||| |||| || | |||||| ||||||| || ||||| | |  ||||||||| |||||||||| ||| || ||||||||    
T  12547725 cttcaaaaatttataaattaactattatttttatgaaataaaaagctatttattgatatttatattttagaaaatatcatttcataagaaaaa 12547633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 13568267 - 13568382
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || |||| |||| ||||||| |||    
T  13568267 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagataaac-catcatttcat 13568365  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  13568366 tgtttataaggatcata 13568382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 19635987 - 19635872
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| || ||||||| ||| || ||||||||  ||||||| |||    
T  19635987 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttaaaaaatatcatttcataagaaaaat-catcatttcat 19635889  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  19635888 tgtttataaggatcata 19635872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 19834580 - 19834465
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| || ||||||| ||| || ||||||||  ||||||| |||    
T  19834580 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttaaaaaatatcatttcataagaaaaat-catcatttcat 19834482  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  19834481 tgtttataaggatcata 19834465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 36947537 - 36947652
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| |  ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  36947537 aaatatataaattaaagatcactttaatgaaataaaaaagtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 36947635  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  36947636 tgtttataaggatcata 36947652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 64 - 239
Target Start/End: Complemental strand, 45481 - 45306
Alignment:
Q  64 aggggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatt 163  Q
    ||||||||||||||  |  | |||||||||  | ||||||||||||  | |||  ||||| |||||| |||||||||||||||| |||||||||||||||    
T  45481 aggggaacttctacactacactcgtaaattatggtgtaccggtactcttacttactaaatctataaattaacgatcaattttatgaaataaatagttatt 45382  T
Q  164 tgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcattcattgtttataagaatcatagtaa 239  Q
    ||||||||||||||||  |||||| || ||| || ||||||||| ||||||||||||||||||||| |||||||||    
T  45381 tgtcggcatttatatttcagaaaacatcatttcataagaaaaacacatcattcattgtttataagagtcatagtaa 45306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 32930 - 32809
Alignment:
Q  69 aacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcg 168  Q
    ||||||||||||  | ||||||| || | ||||||||||||  | |||  ||||| |||||| |||||||| ||||||| | ||||||||||||||| ||    
T  32930 aacttctacggtacactcgtaaactgtggtgtaccggtactcttactttctaaatctataaattaacgatctattttatgagataaatagttatttggcg 32831  T
Q  169 gcatttatattatagaaaatat 190  Q
    ||||||||||| ||||||||||    
T  32830 gcatttatattttagaaaatat 32809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0667 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 239 - 73
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatca-attttataaaataaatagttattt 164  Q
    |||||||||||||||  | ||  ||| |||| |||||||||||||||||||||||| |||||||| |||||||||  ||||||  ||||||||| |||||    
T  239 gggaacttctacggtacactcacaaagtgaggtgtaccggtacttctgcttcataattttataaattaacgatcattttttatgtaataaatagctattt 140  T
Q  165 gtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaat 231  Q
    |||   ||||||||| || | || || ||| || || |||||  ||||| ||||||||||||||||||    
T  139 gtcaatatttatattttatataacatcatttcataa-aaaaaaacatcatttcattgtttataagaat 73  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 112 - 181
Target Start/End: Original strand, 271016 - 271085
Alignment:
Q  112 tgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattat 181  Q
    ||||| ||||||||||||| ||||||||| |||||| ||||||| |||||||||||   |||||||||||    
T  271016 tgctttataaatttataaattaacgatcatttttatgaaataaagagttatttgtcaatatttatattat 271085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 291975 - 291860
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  291975 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacataatttcataagaaaaac-catcatttcat 291877  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  291876 tgtttataaggatcata 291860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 187
Target Start/End: Original strand, 1237 - 1334
Alignment:
Q  88 taaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaa 187  Q
    ||||||||| ||||||| |||| |||||||||||||||||||| ||| |||  ||||||| |||||| | ||||||||||   ||||||||| |||||||    
T  1237 taaattgaggtgtaccgatact-ctgcttcataaatttataaattaatgat-tattttatgaaataagttgttatttgtcattatttatattttagaaaa 1334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 8553 - 8726
Alignment:
Q  60 taaaaggggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaattttataaaataaatagt 159  Q
    ||||| ||||||||||||||| || | |||||||||  || ||| |||||| | |||| |||||  ||||| ||| ||  | |||||| ||||||| |||    
T  8553 taaaatgggaacttctacggtatagttgtaaattgaagtgcacc-gtactttttcttcctaaatcaataaattaatgaatatttttatgaaataaagagt 8651  T
Q  160 tatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataagaatcata 235  Q
    ||||||| |  ||||||||| ||||||  || ||| || ||||||||  ||||| ||||||||||| ||||||||||    
T  8652 tatttgttgatatttatattttagaaaccattatttcataagaaaaa--catcatttcattgtttaaaagaatcata 8726  T

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Target: scaffold0923 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 138
Target Start/End: Complemental strand, 91 - 19
Alignment:
Q  66 gggaacttctacggtgtaatcgtaaattgagatgtaccggtacttctgcttcataaatttataaactaacgat 138  Q
    |||||||||||||||  | ||  ||| |||| |||||||||||| ||||||||||| |||||||| |||||||    
T  91 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgcttcataattttataaattaacgat 19  T

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Target: scaffold0022 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 166474 - 166589
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||||| |||    
T  166474 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcat 166572  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  166573 tgtttataaggatcata 166589  T

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Target: scaffold0349 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 228
Target Start/End: Original strand, 8491 - 8589
Alignment:
Q  130 actaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatca-ttcattgtttataag 228  Q
    ||||||||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || ||||||||| ||||| |||||||||||||||    
T  8491 actaacgatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataagaaaaac-catcatttcattgtttataag 8589  T

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Target: scaffold0239 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 98 - 235
Target Start/End: Complemental strand, 15756 - 15618
Alignment:
Q  98 tgtaccggtacttctgcttcataaatt-tataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattcc 196  Q
    ||||||||||||  || |||||||| | || ||| ||| ||||| ||| || ||||||| || ||||||||   |||||||| |||||||| ||  || |    
T  15756 tgtaccggtactcttgtttcataaaatatagaaattaaagatcactttaatgaaataaaaagatatttgtcaatatttatatcatagaaaacatcgtttc 15657  T
Q  197 agaagaaaaacgcatcatt-cattgtttataagaatcata 235  Q
    | ||||||||| ||||||| ||||||||||||||||||||    
T  15656 ataagaaaaac-catcatttcattgtttataagaatcata 15618  T

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Target: scaffold0493 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Complemental strand, 1739 - 1623
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||||| ||| || ||||||| || ||||||||   ||||||||| ||||||| || ||| || || |||||  ||||||| |||    
T  1739 aaatatataaattaaagatcactttaatgaaataaaaaggtatttgtcaatatttatattttagaaaacatcatttcataaaaaaaaatcatcatttcat 1640  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  1639 tgtttataaggatcata 1623  T

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Target: scaffold0271 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0271
Description:

Target: scaffold0271; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 17043 - 16987
Alignment:
Q  89 aaattgagatgtaccggtacttctgcttcataaatttataaactaacgatcaatttt 145  Q
    |||||||| ||||||| |||| || |||||||||||||| || ||||||||| ||||    
T  17043 aaattgaggtgtaccgatactcctacttcataaatttatcaattaacgatcattttt 16987  T

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Target: scaffold0194 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 17552 - 17667
Alignment:
Q  120 aaatttataaactaacgatcaattttataaaataaatagttatttgtcggcatttatattatagaaaatatgattccagaagaaaaacgcatcatt-cat 218  Q
    |||| |||||| ||| ||| | ||| || ||||||| || |||||||||  ||||||||| ||||||| || ||| || || |||||| ||||||| |||    
T  17552 aaatatataaattaaagattactttaatgaaataaaaaggtatttgtcgatatttatattttagaaaacatcatttcataaaaaaaac-catcatttcat 17650  T
Q  219 tgtttataagaatcata 235  Q
    |||||||||| ||||||    
T  17651 tgtttataaggatcata 17667  T

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