View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20656_low_5 (Length: 438)
Name: NF20656_low_5
Description: NF20656
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20656_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 393; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 6 - 426
Target Start/End: Original strand, 29047589 - 29048009
Alignment:
| Q |
6 |
tgagatgaaatctggaccgtctgctccgaaagttgttaaagcgtttgcaggcacagcagcgtctgcaatggactatgtaatcaaagagacaagtccttct |
105 |
Q |
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| T |
29047589 |
tgagatgaaatctggaccgtctgctccgaaagttgttaaagcgtttgcaggcacagcagcgtctgcaatggactatgtaatcaaagagacaaatccttct |
29047688 |
T |
|
| Q |
106 |
cttggaggtggaaaagtcattggtggaagaattcttcgggggagtaataaatctcctagcagcacctatgaccttgtagaaccaatggactatcttttcg |
205 |
Q |
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|||||||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29047689 |
cttggaggtggaaaagtcgttggtggaagaattcttcgcgggagtaataattctcctagcagcacctatgaccttgtagaaccaatggactatcttttca |
29047788 |
T |
|
| Q |
206 |
tacgagttgtgaaagctcgcgatcttccaaggatggatttgaccggtagccttgatccctatgtgattgtcaaggttggaaacttcaaaggaactaccaa |
305 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
29047789 |
tacgagttgtgaaagctcgcgatcttccaaggatggatttgaccggtagccttgatccctatgtgattgtcaaggttggaaacttcaaaggaacaaccaa |
29047888 |
T |
|
| Q |
306 |
ccactttgagaaaaacaatagtcctgaatggaacctggtgtttgcatttgccaaggagaatcaacaagcaactactcttgaagttgttatcaaagacaag |
405 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29047889 |
tcactttgagaaaaacaatagtcctgaatggaacctggtgtttgcatttgccaaggagaatcaacaagcaactactcttgaagttgttatcaaagacaag |
29047988 |
T |
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| Q |
406 |
gacacaatacatgatgatttt |
426 |
Q |
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||||||||||||||||||||| |
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| T |
29047989 |
gacacaatacatgatgatttt |
29048009 |
T |
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