View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20659_low_3 (Length: 317)
Name: NF20659_low_3
Description: NF20659
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20659_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 20 - 307
Target Start/End: Complemental strand, 12020423 - 12020131
Alignment:
| Q |
20 |
ggtgggtcccactcaaacatatatgatagacacgtggcgcatttgcattctgctgacatgttagccacttcaattccttaccattggttctgattagtct |
119 |
Q |
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| T |
12020423 |
ggtgggtcccactcaaacatatatgatagacacgtggcgcatttgcattctactgacatgttagccacttcaattccttaccattggttctgattagtct |
12020324 |
T |
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| Q |
120 |
ttaaatttggtaccagttttagttaattaatttgtattactcagaaaaagcaaggaaccttgtatt----gtatctcaccggttttgttgtgtttgttca |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
12020323 |
ttaaatttggtaccagttttagttaattaatttgtattactcagaaaaagcaaggaaccttgtattgtatgtatctcaccggttttgttgtgtttgttca |
12020224 |
T |
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| Q |
216 |
cttagtgattatgtatccacacaagaacctcgtacgtacctgactgcttttgtgtctatgttcattc-ttcttttttgaaaaagcatgttcat |
307 |
Q |
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||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |
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| T |
12020223 |
cttggtgattatatatccacacaagaacctcgtacgtacctgactgcttttgtgtccatgttcattctttcttttttgaaaaagcatgttcat |
12020131 |
T |
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