View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2065_high_9 (Length: 235)

Name: NF2065_high_9
Description: NF2065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2065_high_9
NF2065_high_9
[»] chr6 (48 HSPs)
chr6 (1-116)||(7920177-7920292)
chr6 (2-114)||(15058055-15058168)
chr6 (1-113)||(181493-181606)
chr6 (1-113)||(31894274-31894385)
chr6 (1-114)||(11143650-11143764)
chr6 (1-114)||(11656009-11656125)
chr6 (1-114)||(24983512-24983625)
chr6 (2-114)||(34299931-34300046)
chr6 (2-106)||(15582222-15582326)
chr6 (1-113)||(34657626-34657743)
chr6 (1-114)||(29363240-29363357)
chr6 (1-114)||(6801866-6801982)
chr6 (1-114)||(30716835-30716951)
chr6 (9-114)||(4367316-4367425)
chr6 (1-114)||(5302287-5302402)
chr6 (1-93)||(28106013-28106104)
chr6 (1-114)||(13087471-13087581)
chr6 (1-114)||(1781741-1781853)
chr6 (1-99)||(21425635-21425737)
chr6 (49-115)||(3720303-3720369)
chr6 (1-100)||(21010107-21010210)
chr6 (1-76)||(21478194-21478273)
chr6 (5-109)||(1224936-1225038)
chr6 (3-114)||(13909361-13909475)
chr6 (1-114)||(23142604-23142718)
chr6 (62-113)||(3291832-3291883)
chr6 (1-114)||(32440708-32440825)
chr6 (1-109)||(1063671-1063780)
chr6 (1-85)||(12307687-12307772)
chr6 (50-111)||(15046111-15046171)
chr6 (62-115)||(22398412-22398465)
chr6 (4-78)||(27367524-27367602)
chr6 (4-78)||(27457871-27457949)
chr6 (8-115)||(1956041-1956150)
chr6 (44-116)||(16205219-16205291)
chr6 (62-113)||(17828939-17828990)
chr6 (4-113)||(17835325-17835434)
chr6 (1-56)||(27367220-27367277)
chr6 (1-56)||(27457567-27457624)
chr6 (1-41)||(23397755-23397795)
chr6 (52-115)||(1225037-1225099)
chr6 (55-113)||(13206896-13206954)
chr6 (22-79)||(1517242-1517299)
chr6 (22-79)||(1519329-1519386)
chr6 (4-41)||(13207230-13207267)
chr6 (40-113)||(33510117-33510190)
chr6 (2-113)||(7071951-7072060)
chr6 (26-115)||(8695006-8695097)
[»] chr3 (68 HSPs)
chr3 (115-222)||(10305504-10305615)
chr3 (115-222)||(51005325-51005436)
chr3 (3-113)||(39043822-39043932)
chr3 (133-222)||(4251260-4251350)
chr3 (1-113)||(10366714-10366828)
chr3 (1-114)||(43253927-43254043)
chr3 (2-117)||(29024026-29024138)
chr3 (1-110)||(37497427-37497539)
chr3 (1-114)||(19822947-19823062)
chr3 (10-114)||(37695730-37695837)
chr3 (1-114)||(44301497-44301613)
chr3 (3-114)||(23068137-23068249)
chr3 (1-114)||(36476520-36476635)
chr3 (1-115)||(27471271-27471387)
chr3 (5-113)||(30711014-30711123)
chr3 (1-115)||(36460479-36460595)
chr3 (1-114)||(24569164-24569275)
chr3 (1-114)||(30190724-30190839)
chr3 (2-114)||(37311886-37312001)
chr3 (1-114)||(38795280-38795395)
chr3 (1-113)||(12904800-12904914)
chr3 (1-114)||(37773028-37773145)
chr3 (1-114)||(17652689-17652803)
chr3 (1-114)||(53560152-53560268)
chr3 (1-115)||(3901212-3901328)
chr3 (1-110)||(40462257-40462366)
chr3 (1-113)||(45710785-45710900)
chr3 (1-114)||(3313188-3313305)
chr3 (44-114)||(8679118-8679188)
chr3 (1-114)||(12736636-12736750)
chr3 (44-114)||(23004446-23004516)
chr3 (1-114)||(51838023-51838139)
chr3 (5-114)||(52290834-52290944)
chr3 (2-114)||(11905760-11905873)
chr3 (8-114)||(34750445-34750547)
chr3 (1-115)||(38137509-38137625)
chr3 (1-88)||(31158601-31158689)
chr3 (2-115)||(41038456-41038571)
chr3 (2-113)||(28690847-28690957)
chr3 (1-115)||(37804674-37804787)
chr3 (35-113)||(11632053-11632131)
chr3 (1-114)||(34957440-34957554)
chr3 (3-113)||(41351629-41351734)
chr3 (44-107)||(1778624-1778687)
chr3 (1-113)||(54726421-54726535)
chr3 (5-109)||(25108594-25108699)
chr3 (1-113)||(33458985-33459097)
chr3 (2-113)||(27549350-27549464)
chr3 (1-115)||(33491422-33491540)
chr3 (3-113)||(24245158-24245269)
chr3 (34-116)||(30682128-30682211)
chr3 (52-114)||(5323001-5323063)
chr3 (37-115)||(40194477-40194555)
chr3 (1-115)||(42469744-42469858)
chr3 (74-111)||(37804796-37804833)
chr3 (62-115)||(38705174-38705227)
chr3 (41-101)||(14194534-14194594)
chr3 (62-114)||(19611908-19611960)
chr3 (1-41)||(30710585-30710625)
chr3 (2-41)||(37741532-37741571)
chr3 (31-88)||(45811590-45811648)
chr3 (69-115)||(48541063-48541109)
chr3 (1-114)||(49447855-49447971)
chr3 (55-113)||(26467101-26467161)
chr3 (49-93)||(24703648-24703692)
chr3 (62-114)||(36463010-36463062)
chr3 (1-41)||(43715242-43715282)
chr3 (73-113)||(54477524-54477564)
[»] chr5 (44 HSPs)
chr5 (130-222)||(4246090-4246182)
chr5 (1-114)||(6315839-6315954)
chr5 (1-114)||(1248666-1248781)
chr5 (1-114)||(19929882-19929997)
chr5 (3-115)||(21060569-21060682)
chr5 (1-114)||(6753720-6753835)
chr5 (1-115)||(6753965-6754081)
chr5 (1-114)||(8725071-8725186)
chr5 (1-114)||(40899854-40899969)
chr5 (1-113)||(41496016-41496130)
chr5 (1-114)||(40530286-40530402)
chr5 (1-114)||(31654988-31655104)
chr5 (3-113)||(4440959-4441071)
chr5 (1-114)||(4818486-4818602)
chr5 (6-113)||(29570332-29570442)
chr5 (1-114)||(6615942-6616057)
chr5 (1-114)||(8698244-8698360)
chr5 (1-115)||(27542731-27542847)
chr5 (44-113)||(29374323-29374392)
chr5 (1-114)||(3348192-3348307)
chr5 (1-104)||(9515669-9515777)
chr5 (1-113)||(11796230-11796341)
chr5 (1-114)||(2588123-2588240)
chr5 (44-114)||(7827988-7828058)
chr5 (1-114)||(41062222-41062336)
chr5 (1-114)||(27580542-27580651)
chr5 (15-88)||(41480099-41480176)
chr5 (1-113)||(15818545-15818659)
chr5 (48-114)||(22848446-22848512)
chr5 (16-93)||(32439822-32439902)
chr5 (3-100)||(2232145-2232247)
chr5 (1-88)||(41492194-41492285)
chr5 (1-105)||(30512757-30512864)
chr5 (1-105)||(30553097-30553204)
chr5 (15-88)||(41478733-41478810)
chr5 (1-113)||(42803683-42803797)
chr5 (62-112)||(26285542-26285592)
chr5 (35-103)||(39325834-39325903)
chr5 (3-107)||(37101274-37101378)
chr5 (61-108)||(843286-843333)
chr5 (62-113)||(18841478-18841529)
chr5 (6-113)||(24455024-24455130)
chr5 (72-115)||(29856056-29856099)
chr5 (1-115)||(11761359-11761469)
[»] chr2 (49 HSPs)
chr2 (131-222)||(13761576-13761667)
chr2 (1-115)||(36354504-36354619)
chr2 (1-114)||(5789710-5789824)
chr2 (2-114)||(34225527-34225641)
chr2 (1-114)||(9458328-9458442)
chr2 (2-111)||(5272204-5272314)
chr2 (1-114)||(14523434-14523549)
chr2 (1-115)||(17695264-17695382)
chr2 (4-115)||(19937323-19937437)
chr2 (2-114)||(43410363-43410477)
chr2 (1-114)||(37322365-37322479)
chr2 (1-105)||(7494909-7495016)
chr2 (1-114)||(35313823-35313938)
chr2 (1-114)||(16463623-16463740)
chr2 (14-113)||(35242360-35242461)
chr2 (1-115)||(39785521-39785637)
chr2 (1-114)||(36794220-36794335)
chr2 (1-114)||(45235515-45235632)
chr2 (1-113)||(3323335-3323449)
chr2 (1-114)||(8947114-8947231)
chr2 (1-113)||(34120500-34120614)
chr2 (1-114)||(16377718-16377832)
chr2 (1-113)||(25637416-25637531)
chr2 (1-114)||(15359149-15359266)
chr2 (1-112)||(38187947-38188059)
chr2 (1-111)||(7438917-7439030)
chr2 (1-111)||(34451400-34451509)
chr2 (41-115)||(39691468-39691542)
chr2 (1-88)||(25904723-25904813)
chr2 (52-115)||(43115863-43115926)
chr2 (3-113)||(17346425-17346535)
chr2 (2-115)||(18202041-18202157)
chr2 (1-115)||(26608204-26608315)
chr2 (38-113)||(26863421-26863496)
chr2 (1-114)||(11742590-11742706)
chr2 (44-100)||(12520936-12520992)
chr2 (2-113)||(19444083-19444196)
chr2 (3-113)||(32831238-32831348)
chr2 (57-114)||(31448755-31448812)
chr2 (35-100)||(43699672-43699736)
chr2 (44-99)||(16028296-16028351)
chr2 (44-115)||(18853262-18853333)
chr2 (1-114)||(28186150-28186265)
chr2 (44-115)||(39329725-39329795)
chr2 (3-48)||(8928547-8928592)
chr2 (12-114)||(16805829-16805932)
chr2 (12-114)||(16845110-16845213)
chr2 (44-113)||(28170646-28170715)
chr2 (1-41)||(34120658-34120698)
[»] chr8 (49 HSPs)
chr8 (1-114)||(22771900-22772015)
chr8 (2-114)||(10180012-10180126)
chr8 (1-113)||(39405698-39405812)
chr8 (2-114)||(21216166-21216279)
chr8 (2-114)||(396676-396790)
chr8 (1-115)||(29226592-29226707)
chr8 (1-115)||(45425730-45425847)
chr8 (3-114)||(17719323-17719436)
chr8 (1-113)||(34948753-34948865)
chr8 (1-113)||(4428417-4428529)
chr8 (1-113)||(17823858-17823971)
chr8 (1-114)||(32476224-32476338)
chr8 (5-115)||(41091937-41092046)
chr8 (1-114)||(44761559-44761672)
chr8 (1-113)||(13335153-13335266)
chr8 (1-114)||(40996430-40996541)
chr8 (1-114)||(39301021-39301136)
chr8 (1-114)||(10098056-10098172)
chr8 (44-113)||(7172895-7172964)
chr8 (1-114)||(9300178-9300295)
chr8 (1-114)||(26626177-26626292)
chr8 (2-113)||(14855000-14855115)
chr8 (1-112)||(36006954-36007069)
chr8 (1-101)||(10953813-10953912)
chr8 (1-101)||(10961818-10961917)
chr8 (1-115)||(5053217-5053332)
chr8 (2-114)||(31231667-31231781)
chr8 (1-113)||(39466103-39466217)
chr8 (1-114)||(39482548-39482666)
chr8 (4-115)||(1739483-1739595)
chr8 (2-114)||(11977001-11977115)
chr8 (16-115)||(31270974-31271073)
chr8 (3-93)||(2767383-2767475)
chr8 (1-80)||(36967310-36967390)
chr8 (4-79)||(1875839-1875916)
chr8 (44-113)||(4924133-4924202)
chr8 (2-70)||(15675373-15675442)
chr8 (2-80)||(50753-50833)
chr8 (62-114)||(32678402-32678454)
chr8 (62-113)||(27294125-27294176)
chr8 (50-113)||(43719302-43719365)
chr8 (1-113)||(6796395-6796515)
chr8 (53-113)||(21649427-21649487)
chr8 (53-113)||(42886990-42887050)
chr8 (74-113)||(31331419-31331458)
chr8 (58-115)||(12559558-12559615)
chr8 (65-113)||(5356602-5356650)
chr8 (1-116)||(32631351-32631467)
chr8 (66-106)||(34057691-34057731)
[»] chr4 (73 HSPs)
chr4 (2-114)||(16821401-16821516)
chr4 (2-115)||(34360592-34360707)
chr4 (1-115)||(35311292-35311410)
chr4 (1-113)||(7061735-7061849)
chr4 (1-115)||(26147684-26147803)
chr4 (1-113)||(42616974-42617088)
chr4 (1-114)||(21240774-21240885)
chr4 (1-114)||(22129978-22130094)
chr4 (1-114)||(38405172-38405288)
chr4 (1-114)||(49176004-49176120)
chr4 (130-211)||(1814041-1814122)
chr4 (1-114)||(2066727-2066840)
chr4 (1-114)||(5841497-5841613)
chr4 (1-112)||(25233118-25233230)
chr4 (1-114)||(47773089-47773204)
chr4 (1-114)||(49428412-49428526)
chr4 (1-111)||(49746896-49747009)
chr4 (1-113)||(6643731-6643844)
chr4 (1-113)||(35380404-35380519)
chr4 (38-115)||(50264149-50264226)
chr4 (1-114)||(33790801-33790918)
chr4 (1-114)||(52859869-52859979)
chr4 (1-113)||(51624722-51624836)
chr4 (1-114)||(11907669-11907784)
chr4 (2-113)||(53412044-53412158)
chr4 (2-114)||(52247498-52247611)
chr4 (44-114)||(17237366-17237436)
chr4 (37-115)||(47464434-47464512)
chr4 (44-113)||(43237224-43237293)
chr4 (3-100)||(35251837-35251936)
chr4 (2-115)||(2653357-2653472)
chr4 (1-113)||(10754310-10754423)
chr4 (1-113)||(10968079-10968192)
chr4 (1-86)||(5618484-5618570)
chr4 (3-114)||(19265744-19265859)
chr4 (1-88)||(28500979-28501070)
chr4 (2-115)||(43902188-43902303)
chr4 (39-115)||(32884777-32884853)
chr4 (1-79)||(4972509-4972588)
chr4 (2-114)||(44536266-44536381)
chr4 (1-112)||(36985722-36985835)
chr4 (11-111)||(31370373-31370474)
chr4 (3-113)||(35998750-35998861)
chr4 (2-114)||(40122924-40123039)
chr4 (44-113)||(47359020-47359089)
chr4 (2-114)||(2942714-2942831)
chr4 (1-114)||(25142449-25142566)
chr4 (54-114)||(48914218-48914278)
chr4 (1-113)||(49579249-49579361)
chr4 (1-79)||(19627115-19627194)
chr4 (3-114)||(30682266-30682380)
chr4 (2-113)||(54506725-54506838)
chr4 (2-113)||(6609694-6609811)
chr4 (2-88)||(46396967-46397055)
chr4 (2-113)||(54202133-54202246)
chr4 (1-114)||(53346702-53346810)
chr4 (2-114)||(4739435-4739549)
chr4 (2-114)||(17114377-17114491)
chr4 (62-113)||(18741545-18741596)
chr4 (2-115)||(28911221-28911340)
chr4 (2-74)||(54921803-54921877)
chr4 (52-114)||(461947-462009)
chr4 (62-116)||(11288697-11288751)
chr4 (31-117)||(30260972-30261058)
chr4 (16-78)||(17121195-17121259)
chr4 (41-113)||(18532157-18532229)
chr4 (55-113)||(20612242-20612300)
chr4 (2-48)||(20681406-20681452)
chr4 (53-114)||(10672643-10672704)
chr4 (53-114)||(10886283-10886344)
chr4 (1-80)||(52868909-52868990)
chr4 (1-115)||(3689502-3689614)
chr4 (62-114)||(44526378-44526430)
[»] scaffold0024 (1 HSPs)
scaffold0024 (130-219)||(143110-143199)
[»] scaffold0159 (1 HSPs)
scaffold0159 (1-114)||(34083-34197)
[»] chr1 (74 HSPs)
chr1 (1-115)||(12039018-12039134)
chr1 (1-115)||(39864047-39864163)
chr1 (1-114)||(31042733-31042848)
chr1 (1-114)||(35367738-35367853)
chr1 (1-113)||(37506060-37506174)
chr1 (1-114)||(49224053-49224168)
chr1 (1-103)||(4659713-4659816)
chr1 (1-111)||(6785192-6785304)
chr1 (1-113)||(24991721-24991836)
chr1 (1-114)||(20209907-20210022)
chr1 (2-114)||(52429279-52429395)
chr1 (1-110)||(16395117-16395227)
chr1 (1-115)||(7759151-7759267)
chr1 (2-112)||(13579690-13579801)
chr1 (1-114)||(40144914-40145029)
chr1 (1-114)||(26093330-26093445)
chr1 (1-114)||(23169060-23169173)
chr1 (2-113)||(2572405-2572519)
chr1 (2-113)||(30755009-30755123)
chr1 (1-113)||(33733330-33733444)
chr1 (1-114)||(38787274-38787392)
chr1 (2-113)||(9379169-9379282)
chr1 (1-115)||(14757660-14757775)
chr1 (49-113)||(44707828-44707892)
chr1 (3-111)||(22856307-22856417)
chr1 (34-113)||(25089154-25089233)
chr1 (1-115)||(52837219-52837332)
chr1 (5-114)||(916967-917075)
chr1 (2-114)||(3260529-3260642)
chr1 (49-110)||(9307613-9307674)
chr1 (1-93)||(35682882-35682975)
chr1 (1-113)||(44761599-44761709)
chr1 (1-113)||(37177772-37177886)
chr1 (5-113)||(32826059-32826171)
chr1 (44-114)||(37276442-37276512)
chr1 (1-114)||(7351575-7351687)
chr1 (17-113)||(8896400-8896499)
chr1 (2-115)||(37539066-37539179)
chr1 (1-115)||(6160525-6160632)
chr1 (2-113)||(11449824-11449935)
chr1 (2-88)||(29074817-29074909)
chr1 (31-113)||(2137437-2137520)
chr1 (2-112)||(27721470-27721581)
chr1 (3-111)||(9412873-9412982)
chr1 (56-114)||(15699115-15699173)
chr1 (1-115)||(31978718-31978831)
chr1 (4-114)||(36701862-36701972)
chr1 (4-114)||(36717966-36718076)
chr1 (1-113)||(10495775-10495889)
chr1 (50-115)||(27896942-27897007)
chr1 (2-113)||(34031595-34031708)
chr1 (1-114)||(41121892-41122005)
chr1 (1-114)||(28748927-28749042)
chr1 (1-115)||(40261157-40261275)
chr1 (2-70)||(3312056-3312126)
chr1 (35-113)||(6023717-6023798)
chr1 (63-114)||(15904751-15904802)
chr1 (31-93)||(24500066-24500128)
chr1 (2-114)||(45331276-45331392)
chr1 (2-110)||(34331240-34331347)
chr1 (1-113)||(39887770-39887885)
chr1 (1-110)||(26256159-26256270)
chr1 (2-113)||(26258008-26258122)
chr1 (3-39)||(27687265-27687301)
chr1 (5-113)||(28436621-28436729)
chr1 (49-113)||(29778464-29778528)
chr1 (52-110)||(4441674-4441732)
chr1 (2-115)||(32219727-32219846)
chr1 (2-81)||(2981948-2982026)
chr1 (1-38)||(37275537-37275574)
chr1 (1-67)||(43500854-43500922)
chr1 (1-58)||(12151124-12151183)
chr1 (1-76)||(15778051-15778127)
chr1 (1-41)||(44426848-44426888)
[»] chr7 (57 HSPs)
chr7 (1-114)||(34947443-34947558)
chr7 (1-114)||(21350696-21350812)
chr7 (1-114)||(25571363-25571477)
chr7 (1-114)||(759162-759277)
chr7 (1-114)||(2459414-2459529)
chr7 (1-114)||(28202380-28202495)
chr7 (2-113)||(34100619-34100732)
chr7 (1-115)||(37245633-37245749)
chr7 (1-114)||(9785931-9786046)
chr7 (1-113)||(6495006-6495119)
chr7 (1-113)||(19271805-19271918)
chr7 (1-115)||(41506135-41506251)
chr7 (1-114)||(11373499-11373614)
chr7 (1-115)||(33819155-33819273)
chr7 (1-114)||(21390237-21390353)
chr7 (1-114)||(28103673-28103791)
chr7 (1-115)||(32346122-32346238)
chr7 (1-115)||(83327-83444)
chr7 (1-114)||(21760055-21760170)
chr7 (1-114)||(36790681-36790798)
chr7 (1-111)||(7463155-7463268)
chr7 (3-114)||(24516360-24516473)
chr7 (1-114)||(44424088-44424202)
chr7 (2-114)||(13961905-13962017)
chr7 (9-115)||(32018986-32019094)
chr7 (1-110)||(47045546-47045651)
chr7 (6-112)||(49101619-49101719)
chr7 (1-114)||(7457492-7457606)
chr7 (1-114)||(48608810-48608924)
chr7 (2-113)||(3178276-3178391)
chr7 (2-114)||(24166934-24167049)
chr7 (2-103)||(37490319-37490422)
chr7 (1-114)||(43873866-43873981)
chr7 (3-115)||(17610608-17610722)
chr7 (2-115)||(26973966-26974085)
chr7 (1-115)||(38391695-38391807)
chr7 (37-115)||(17828421-17828498)
chr7 (1-112)||(16904320-16904435)
chr7 (1-115)||(27920929-27921047)
chr7 (1-114)||(42935601-42935719)
chr7 (37-114)||(46478364-46478441)
chr7 (1-114)||(8592511-8592626)
chr7 (21-111)||(22738665-22738756)
chr7 (1-88)||(40076261-40076350)
chr7 (1-115)||(30865908-30866026)
chr7 (2-111)||(4958674-4958787)
chr7 (1-115)||(32018782-32018900)
chr7 (2-78)||(30107072-30107150)
chr7 (1-114)||(31930568-31930688)
chr7 (55-113)||(30546427-30546485)
chr7 (1-113)||(5524323-5524437)
chr7 (13-112)||(17610862-17610958)
chr7 (1-114)||(37850798-37850911)
chr7 (1-114)||(23745402-23745518)
chr7 (41-103)||(37490448-37490510)
chr7 (64-113)||(35333051-35333100)
chr7 (62-106)||(24122563-24122607)
[»] scaffold0095 (2 HSPs)
scaffold0095 (1-113)||(50140-50254)
scaffold0095 (1-113)||(22284-22398)
[»] scaffold0330 (1 HSPs)
scaffold0330 (1-114)||(5328-5441)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-114)||(8045-8161)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-114)||(136101-136217)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-113)||(252870-252982)
[»] scaffold1809 (1 HSPs)
scaffold1809 (1-113)||(749-862)
[»] scaffold0012 (1 HSPs)
scaffold0012 (52-114)||(105673-105735)
[»] scaffold0182 (1 HSPs)
scaffold0182 (52-114)||(20417-20479)
[»] scaffold0110 (2 HSPs)
scaffold0110 (41-112)||(1682-1753)
scaffold0110 (2-41)||(1493-1532)
[»] scaffold0294 (1 HSPs)
scaffold0294 (1-114)||(16975-17086)
[»] scaffold0016 (1 HSPs)
scaffold0016 (2-99)||(76229-76328)
[»] scaffold0011 (1 HSPs)
scaffold0011 (48-113)||(14233-14298)
[»] scaffold0302 (1 HSPs)
scaffold0302 (62-114)||(16097-16149)
[»] scaffold0583 (1 HSPs)
scaffold0583 (2-114)||(1963-2076)


Alignment Details
Target: chr6 (Bit Score: 100; Significance: 1e-49; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 7920177 - 7920292
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7920177 caaaataattatcactttagaatatcaatgcaacatttatttatttttcactattataccattatttattgaatttcattcaaattaaatacttcactaa 7920276  T
Q  101 ctacaattaataagat 116  Q
    ||||||||||||||||    
T  7920277 ctacaattaataagat 7920292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 15058055 - 15058168
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||||||||||||| |||||| || |||||||||||  |||||  ||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  15058055 aaaataattgtcactttataataccgatgcaacatttattattttttgtactattatacccttatttattgaatttcatccaacttaaatacttcactaa 15058154  T
Q  101 ctacaattaataag 114  Q
    ||||||||||||||    
T  15058155 ctacaattaataag 15058168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 181493 - 181606
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||| ||||| ||| |||||||||||  ||||||||||||||||||| |||||||||||||||||| |||||||| |||| ||||    
T  181493 caaaataattgtcactttacaatac-aatgcaacatttattattatttttcactattatacccttatttattgaatttcatccaacttaactactccact 181591  T
Q  99 aactacaattaataa 113  Q
    ||||| |||||||||    
T  181592 aactataattaataa 181606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 31894385 - 31894274
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||| ||||| |||| |||| |||| |||||||||||  ||||||||||||||||| ||||||||| |||||||| |||||||| |||||||||||    
T  31894385 caaaataaatgtca-tttacaatatcaatgcaacatttattattttttcactattatacccttatttattaaatttcatccaacttaactacttcactaa 31894287  T
Q  101 ctacaattaataa 113  Q
    |||||||||||||    
T  31894286 ctacaattaataa 31894274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 11143764 - 11143650
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||| ||||||||||||||| ||||||| || |||||||| | ||||||| ||| ||||| |||||||||||| ||||| |||||||| ||||||||||    
T  11143764 caaaaaaattgtcactttagactaccaatgcagcatttattatttttttcattataatacccttatttattgaacttcatccaacttaactacttcacta 11143665  T
Q  100 actacaattaataag 114  Q
    |||| ||||||||||    
T  11143664 actataattaataag 11143650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 11656125 - 11656009
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    |||||||||||||||||||||||| |||| || ||||||||  |||||   || ||||||||| |||||||||||||||||| |||||| | |||| |||    
T  11656125 caaaataattgtcactttagaatatcaatgcagcatttattatttttttcccattattatacccttatttattgaatttcatccaactttactactccac 11656026  T
Q  98 taactacaattaataag 114  Q
    |||||||||||||||||    
T  11656025 taactacaattaataag 11656009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 24983625 - 24983512
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||||||||||||||||| ||||||  | |||||  ||| || | ||||| |||||| |||||||||||||||||  |||||||| |||| ||||||    
T  24983625 caaaataattgtcactttagattaccaacgccacattatttttttatccactaatatacccttatttattgaatttcacccaacttaactactccactaa 24983526  T
Q  101 ctacaattaataag 114  Q
    ||||||||||||||    
T  24983525 ctacaattaataag 24983512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 34299931 - 34300046
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||||||| ||||||||||||||||  ||| |   ||||| |||| | |||||||||||||  ||| |||||||| |||||||||    
T  34299931 aaaataattgtcactttagaatatcaatacaacatttattattttctttccactaatatatccttatttattgaataccatccaacttaactacttcact 34300030  T
Q  99 aactacaattaataag 114  Q
    ||| ||||||||||||    
T  34300031 aaccacaattaataag 34300046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 15582222 - 15582326
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaac 101  Q
    ||||||||||||| ||||||||| |||| ||| | |||||  ||||||||||| ||| | ||||||||||||||||||| |||||||  |||||||||||    
T  15582222 aaaataattgtcattttagaatatcaatgcaataattattattttttcactatcatatccttatttattgaatttcattaaacttaaccacttcactaac 15582321  T
Q  102 tacaa 106  Q
    |||||    
T  15582322 tacaa 15582326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 34657743 - 34657626
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tattttt----cactattataccattatttattgaatttcattcaacttaaatacttc 95  Q
    ||||||||||||||||||| |||||| || ||  ||||||| |||||||    |||||||||||  |||||||||||||||||| |||||||| |||| |    
T  34657743 caaaataattgtcactttacaatacctatgcagaatttattatattttttttccactattatacatttatttattgaatttcatccaacttaactactcc 34657644  T
Q  96 actaactacaattaataa 113  Q
    ||||||||||||||||||    
T  34657643 actaactacaattaataa 34657626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 29363240 - 29363357
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tattttt--cactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    ||||||||||||||||| ||||||||||| || ||||||||  |||||||  || ||||||||  |||||||||||||||||| |||||||| || | |     
T  29363240 caaaataattgtcacttcagaataccaatgcagcatttattattattttttccattattatactcttatttattgaatttcatccaacttaactaatccg 29363339  T
Q  97 ctaactacaattaataag 114  Q
    ||||||||||||||||||    
T  29363340 ctaactacaattaataag 29363357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 6801866 - 6801982
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||| |||| |||| |||||||||||  |||||   || ||| ||||| |||||||| ||| ||||| |||||||| |||| |||    
T  6801866 caaaataattgtcactttataatatcaatgcaacatttattattttttttccattataatacccttatttatcgaacttcatccaacttaactactccac 6801965  T
Q  98 taactacaattaataag 114  Q
    |||||||||||||||||    
T  6801966 taactacaattaataag 6801982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 30716835 - 30716951
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||||||||||| | |||||||||||  |||||   || ||| ||||  ||||||||||||||| || |||||| | |||| |||    
T  30716835 caaaataattgtcactttagaataccagtgcaacatttattattttttttccattataatactcttatttattgaattttatccaactttactactccac 30716934  T
Q  98 taactacaattaataag 114  Q
    |||||||||||||||||    
T  30716935 taactacaattaataag 30716951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 4367425 - 4367316
Alignment:
Q  9 ttgtcactttagaataccaatacaacatttatt----tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactac 104  Q
    |||||||||||||||| ||||||| ||||||||    | ||||||  |||||| || ||||||||| |||||||| |||||||| |||||||||||||||    
T  4367425 ttgtcactttagaataacaatacatcatttattattatttttttctttattattcccttatttattaaatttcatgcaacttaactacttcactaactac 4367326  T
Q  105 aattaataag 114  Q
    | ||||||||    
T  4367325 agttaataag 4367316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 5302287 - 5302402
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||||||||| ||| || ||||||||  |||||  || ||| |||||  ||||||||||| ||||| |||||||| |||| || |    
T  5302287 caaaataattgtcactttagaatactaatgcagcatttattatttttttccattataatacccgtatttattgaacttcatccaacttaactactccatt 5302386  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  5302387 aactacaattaataag 5302402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 28106104 - 28106013
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatact 93  Q
    ||||||||||||||||||| |||| |||| |||  |||| || |||| |||||||||| ||||||||||||||||||||||||||||| ||||    
T  28106104 caaaataattgtcactttacaataacaatgcaagttttaatt-ttttccactattatatcattatttattgaatttcattcaacttaactact 28106013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 13087471 - 13087581
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||||| ||| |||| |||||||||  ||||||| |||   ||||| |||||||   |||||||||||||||||| |||||||| |||||||||||    
T  13087471 caaaataattatcattttaaaataccaatgaaacattttttt---tttcattattatattcttatttattgaatttcatccaacttaattacttcactaa 13087567  T
Q  101 ctacaattaataag 114  Q
    ||| ||||||||||    
T  13087568 ctataattaataag 13087581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 1781741 - 1781853
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||||||||| |||| || | |||||||| ||| | || | ||||||||||| || |||||||||||||||||||||| || ||| |||||    
T  1781741 caaaataattgtcactttacaatatcattgcaacatttttttttcttcccactattataccttt-tttattgaatttcattcaactt-aacactccacta 1781838  T
Q  100 actacaattaataag 114  Q
    |||||||||||||||    
T  1781839 actacaattaataag 1781853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 21425737 - 21425635
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tattttt--cactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    |||||||||||| |||||| |||| |||| |||||||||||  |||||||  ||| |||||| | |||||||||||||||||| |||||||| |||||||    
T  21425737 caaaataattgttactttacaatatcaatgcaacatttattattattttttccaccattatatccttatttattgaatttcatccaacttaactacttca 21425638  T
Q  97 cta 99  Q
    |||    
T  21425637 cta 21425635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 3720369 - 3720303
Alignment:
Q  49 cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 115  Q
    |||||||||||  ||||||| ||||||||||||||||||| || | |||||||||||||||||||||    
T  3720369 cactattatactcttatttactgaatttcattcaacttaactattccactaactacaattaataaga 3720303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 21010107 - 21010210
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttat----ttatttttcactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    ||||||||||||||||||| ||||||||| || |||||||    || |||| || ||||||||  |||||||||||||||||| |||||||| |||| ||    
T  21010107 caaaataattgtcactttataataccaatgcagcatttataatttttttttccattattatactgttatttattgaatttcatccaacttaactactcca 21010206  T
Q  97 ctaa 100  Q
    ||||    
T  21010207 ctaa 21010210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 21478273 - 21478194
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttat--ttattttt--cactattataccattatttattgaattt 76  Q
    ||||||||||||||||||| ||||||||||||||||||||  ||||||||  |||||||||| | |||||||||| ||||    
T  21478273 caaaataattgtcactttacaataccaatacaacatttattattattttttccactattataaccttatttattgcattt 21478194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 1224936 - 1225038
Alignment:
Q  5 ataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactac 104  Q
    ||||| ||||||||| ||||  ||| |||||||||||| ||||||||||||||||| ||||||||| ||||| || |||||||| | ||| ||||||||     
T  1224936 ataatagtcactttaaaataagaatgcaacatttattt-tttttcactattatacccttatttattcaattt-atccaacttaacttcttaactaactaa 1225033  T
Q  105 aatta 109  Q
    |||||    
T  1225034 aatta 1225038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 13909361 - 13909475
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||| | ||||  ||| ||||||||||||||||  |||||   || ||||||||  ||||||||| ||||||||  ||||||| |||| |||||    
T  13909361 aaataattgtaattttacgatatcaatacaacatttattatttttttctcattattatactcttatttattcaatttcatctaacttaattactccacta 13909460  T
Q  100 actacaattaataag 114  Q
    |||||||||||||||    
T  13909461 actacaattaataag 13909475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 23142604 - 23142718
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttat--ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||| |||| |||| ||||||||||  || |||  || ||||||||| || |||||||||||||||  | ||||| |||| ||||    
T  23142604 caaaataattgtcactttacaatatcaatgcaacatttatcgttttttcccattattatacc-ttctttattgaatttcatctagcttaactactccact 23142702  T
Q  99 aactacaattaataag 114  Q
    | ||||||||||||||    
T  23142703 acctacaattaataag 23142718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 3291883 - 3291832
Alignment:
Q  62 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    ||||||||||||||| || |||||||| ||||||||||||||||||||||||    
T  3291883 ttatttattgaattttatccaacttaactacttcactaactacaattaataa 3291832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 32440825 - 32440708
Alignment:
Q  1 caaaataattgtcactttagaa--taccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    ||||||||||||||||||||||  || |||| || ||||||||  |||||| || |||| |||| |||||||||  ||||||| |||||||| ||||  |    
T  32440825 caaaataattgtcactttagaaaatatcaatgcagcatttattattattttccattattgtacctttatttattacatttcatccaacttaactactcta 32440726  T
Q  97 ctaactacaattaataag 114  Q
    |||| |||||||||||||    
T  32440725 ctaattacaattaataag 32440708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 1063780 - 1063671
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcact-attataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||||||| |||| |||||| ||  | ||||||||  ||||||  | |||||||| ||| ||||| ||||||||| ||||||| |||| |||||    
T  1063780 caaaataattgtcattttaaaataccgatgtagcatttattattttttccatcattatacccttacttattaaatttcatttaacttaactactccacta 1063681  T
Q  100 actacaatta 109  Q
    ||||||||||    
T  1063680 actacaatta 1063671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 12307772 - 12307687
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaact 85  Q
    ||||||||||||||||||| ||||  |||||||||||||||  |||||| |||| ||||   ||||||||||||||||| ||||||    
T  12307772 caaaataattgtcactttaaaatattaatacaacatttattattttttcaactaatatattcttatttattgaatttcactcaact 12307687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 15046111 - 15046171
Alignment:
Q  50 actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaat 111  Q
    ||||||||||| |||||||||||||||||| |||| ||| |||| |||||||||||||||||    
T  15046111 actattatacccttatttattgaatttcatccaac-taactactccactaactacaattaat 15046171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 22398412 - 22398465
Alignment:
Q  62 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 115  Q
    ||||||||||||||||||  ||||||| ||||||| ||||||||||||||||||    
T  22398412 ttatttattgaatttcatctaacttaactacttcaataactacaattaataaga 22398465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 27367602 - 27367524
Alignment:
Q  4 aataattgtcactttagaataccaatacaacatttatttattttt----cactattataccattatttattgaatttca 78  Q
    |||||||||||||||| |||||||||  ||||||||||  |||||    |||||||||||| |||||||||||||||||    
T  27367602 aataattgtcactttacaataccaatgtaacatttattagttttttttccactattatacccttatttattgaatttca 27367524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 27457949 - 27457871
Alignment:
Q  4 aataattgtcactttagaataccaatacaacatttatttattttt----cactattataccattatttattgaatttca 78  Q
    |||||||||||||||| |||||||||  ||||||||||  |||||    |||||||||||| |||||||||||||||||    
T  27457949 aataattgtcactttacaataccaatgtaacatttattagttttttttccactattatacccttatttattgaatttca 27457871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 1956150 - 1956041
Alignment:
Q  8 attgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactac 104  Q
    |||||||||||| |||| |||| |||||||||||  |||||   || ||||||||| ||||||||||||||| ||  |||  |  |||||||||||||||    
T  1956150 attgtcactttataataacaatgcaacatttattatttttttctcattattatacc-ttatttattgaattttatcgaacacagctacttcactaactac 1956052  T
Q  105 aattaataaga 115  Q
    |||||||||||    
T  1956051 aattaataaga 1956041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 16205291 - 16205219
Alignment:
Q  44 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataagat 116  Q
    ||||||||| || |||  ||||||||||| ||||||  |||||||||| | ||||||||||||||||||||||    
T  16205291 tttttcactgttgtacacttatttattgagtttcatctaacttaaatattccactaactacaattaataagat 16205219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 17828939 - 17828990
Alignment:
Q  62 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    ||||| ||| |||||||| |||||||| ||||||||||||||||||||||||    
T  17828939 ttattaattaaatttcatccaacttaattacttcactaactacaattaataa 17828990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 17835325 - 17835434
Alignment:
Q  4 aataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaact 102  Q
    |||||| ||||| ||||||||||||| |||||||| || | |||| |  ||||||||||||| ||| ||||| |||| |||||||| ||||  || ||||    
T  17835325 aataatagtcacgttagaataccaatgcaacatttgttattttttcctatattataccatta-ttaatgaatatcatccaacttaactactaaacaaact 17835423  T
Q  103 acaattaataa 113  Q
    |||||||||||    
T  17835424 acaattaataa 17835434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27367277 - 27367220
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttat--ttatttttcactatta 56  Q
    ||||||||||||||||||||||||||||| || |||||||  |||||||||| |||||    
T  27367277 caaaataattgtcactttagaataccaatgcatcatttattattatttttcattatta 27367220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27457624 - 27457567
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttat--ttatttttcactatta 56  Q
    ||||||||||||||||||||||||||||| || |||||||  |||||||||| |||||    
T  27457624 caaaataattgtcactttagaataccaatgcatcatttattattatttttcattatta 27457567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23397795 - 23397755
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt 41  Q
    |||||||||||||||||||||||| |||| |||||||||||    
T  23397795 caaaataattgtcactttagaatatcaatgcaacatttatt 23397755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 1225037 - 1225099
Alignment:
Q  52 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 115  Q
    ||||||||| ||||||||| ||||| || |||||||| | |||||||||||| |||||||||||    
T  1225037 tattatacccttatttattcaattt-atccaacttaacttcttcactaactaaaattaataaga 1225099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 13206954 - 13206896
Alignment:
Q  55 tataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    |||||| |||||||||||||| || |||| ||||  ||| |||||||||||||||||||    
T  13206954 tatacccttatttattgaattacactcaatttaacaactccactaactacaattaataa 13206896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 1517242 - 1517299
Alignment:
Q  22 ataccaatacaacatttatttatttttcactattataccattatttattgaatttcat 79  Q
    |||||||| |||||||||||  |||||||||| ||||   ||||||||||||||||||    
T  1517242 ataccaatgcaacatttattattttttcactaatatatttttatttattgaatttcat 1517299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 1519329 - 1519386
Alignment:
Q  22 ataccaatacaacatttatttatttttcactattataccattatttattgaatttcat 79  Q
    |||||||| |||||||||||  |||||||||| ||||   ||||||||||||||||||    
T  1519329 ataccaatgcaacatttattattttttcactaatatatttttatttattgaatttcat 1519386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 13207267 - 13207230
Alignment:
Q  4 aataattgtcactttagaataccaatacaacatttatt 41  Q
    |||||||||||||||||| ||||||| |||||||||||    
T  13207267 aataattgtcactttagactaccaatgcaacatttatt 13207230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 33510117 - 33510190
Alignment:
Q  40 tttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    ||||||||| | ||||||||| ||||||| | |||||||| |||||||| ||||  | ||| ||||||||||||    
T  33510117 tttattttttattattatacccttatttaataaatttcatccaacttaactactcaattaattacaattaataa 33510190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 7071951 - 7072060
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaac 101  Q
    ||||||| ||| |||||| |||| ||||  ||||||||||| || |  ||||||||||  ||||||||||||||||||  ||| |   ||||||||||||    
T  7071951 aaaataactgttactttaaaatatcaatgtaacatttattttttct--actattatacacttatttattgaatttcatcaaacgttgctacttcactaac 7072048  T
Q  102 tacaattaataa 113  Q
    || ||| |||||    
T  7072049 tataatcaataa 7072060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 8695006 - 8695097
Alignment:
Q  26 caatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 115  Q
    |||| |||||||||||  |||||| ||||| ||||   |||||||| |||||||| |  | ||||  |||||||||||||||||||||||||    
T  8695006 caatgcaacatttattattattttccactagtatattcttatttatagaatttcacttcatttaaccacttcactaactacaattaataaga 8695097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 115 - 222
Target Start/End: Complemental strand, 10305615 - 10305504
Alignment:
Q  115 atggaaaatgcttaa----gcgacaaaagtttcacgaatatcacacgagaaaagctcaaaagcggtgatttccttgttttatctctttttggttatacca 210  Q
    |||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10305615 atggaaaatgcttaacatcgcgacaaaagtttcacgaatatcacacgagaaaagctcaaaagcggtgatttccttgttttatctctttttggtgatacca 10305516  T
Q  211 tttatctctccc 222  Q
    ||||||||||||    
T  10305515 tttatctctccc 10305504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 115 - 222
Target Start/End: Complemental strand, 51005436 - 51005325
Alignment:
Q  115 atggaaaatgcttaa----gcgacaaaagtttcacgaatatcacacgagaaaagctcaaaagcggtgatttccttgttttatctctttttggttatacca 210  Q
    |||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  51005436 atggaaaatgcttaacatcgcgacaaaagtttcacgaatatcacacgagaaaagctcaaaagcggtgatttccttgttttatctctttttggtcatacca 51005337  T
Q  211 tttatctctccc 222  Q
    ||||||||||||    
T  51005336 tttatctctccc 51005325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 39043932 - 39043822
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaact 102  Q
    ||||||||||||||||||||||||||| |||||||||||  ||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  39043932 aaataattgtcactttagaataccaatgcaacatttattattttttcattattatacccttatttattgaatttcattcaacttaactactccactaact 39043833  T
Q  103 acaattaataa 113  Q
    |||||||||||    
T  39043832 acaattaataa 39043822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 4251260 - 4251350
Alignment:
Q  133 acaaaagtttcacgaatatcacacgagaaaagctcaaaagcggtgatttccttg-ttttatctctttttggttataccatttatctctccc 222  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  4251260 acaaaagtttcacgaatatcacacgagaaaagctcaaaagcggtgatttccttgtttttatctctttttggtcataccatttatctctccc 4251350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 10366828 - 10366714
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcac--tattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||||||||||||| |||||||||||  |||||| |  ||||||||| |||||||||||||||||| |||||||| |||||||||    
T  10366828 caaaataattgtcactttagaataccaatgcaacatttattattttttcccattattatacccttatttattgaatttcatccaacttaactacttcact 10366729  T
Q  99 aactacaattaataa 113  Q
    |||||||||||||||    
T  10366728 aactacaattaataa 10366714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 43254043 - 43253927
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||| ||||||||| |||||||||||  |||||   |||||||||||| ||||||| |||||||||| | |||||| |||| |||    
T  43254043 caaaataattgtcactttacaataccaatgcaacatttattagtttttttccactattatacccttatttaatgaatttcatcccacttaactactccac 43253944  T
Q  98 taactacaattaataag 114  Q
    |||||||||||||||||    
T  43253943 taactacaattaataag 43253927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 29024138 - 29024026
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaac 101  Q
    ||||||||||||||||||||||| ||||  | ||||| |||   || || |||||||||||||||||||||||||||| |||||||| |||| |||||||    
T  29024138 aaaataattgtcactttagaatatcaatgtagcattttttt---ttccattattataccattatttattgaatttcatccaacttaattactccactaac 29024042  T
Q  102 tacaattaataagatg 117  Q
    ||||||||||||||||    
T  29024041 tacaattaataagatg 29024026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 37497427 - 37497539
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tattttt-cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||| |||||||||||||||||||||  ||||||| || ||||||||  |||||||||||||||||| |||||||| |||| |||    
T  37497427 caaaataattgtcactttataataccaatacaacatttattattattttttcattattatacgtttatttattgaatttcatccaacttaactactccac 37497526  T
Q  98 taactacaattaa 110  Q
    |||||||| ||||    
T  37497527 taactacagttaa 37497539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 19822947 - 19823062
Alignment:
Q  1 caaaataattgtcacttt-agaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||||||| ||||||||||| || |||||||| | ||||||| || |||||| |||||||||||||||||| |||||||| || | ||||    
T  19822947 caaaataattgtcacttttagaataccaatgcagcatttattatttttttcattaatatacccttatttattgaatttcatccaacttaactattccact 19823046  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  19823047 aactacaattaataag 19823062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 37695837 - 37695730
Alignment:
Q  10 tgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaa 106  Q
    |||||||||||||||||||| |||||||||||  |||||   || ||||||||| ||||||||||||||||||  ||||||| |||| ||||||||||||    
T  37695837 tgtcactttagaataccaatgcaacatttattattttttttccattattatacccttatttattgaatttcatctaacttaactactccactaactacaa 37695738  T
Q  107 ttaataag 114  Q
    ||||||||    
T  37695737 ttaataag 37695730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 44301497 - 44301613
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttc-actattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||| |||| |||| |||||||||||  |||||||| ||||||||||  |||||||||||||||||| |||||||| |||| |||    
T  44301497 caaaataattgtcactttataatatcaatgcaacatttattaatatttttccactattatactcttatttattgaatttcatccaacttaactactccac 44301596  T
Q  98 taactacaattaataag 114  Q
    ||| ||||||| |||||    
T  44301597 taattacaattgataag 44301613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 23068137 - 23068249
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttatttatttt-tcactattataccattatttattgaatttcattcaacttaaatacttcactaac 101  Q
    |||||||||| |||||| |||| ||||||||||||||||  |||| ||| ||||||||  ||||||||||||||||||  |||||||||| ||||| |||    
T  23068137 aaataattgttactttacaatatcaatacaacatttattatttttgtcattattatacttttatttattgaatttcatctaacttaaatatttcacaaac 23068236  T
Q  102 tacaattaataag 114  Q
    |||||||||||||    
T  23068237 tacaattaataag 23068249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 36476520 - 36476635
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc--actattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||||||||||||| || ||||||||  |||||   | ||||||||| ||||||||||||||||||  ||||||| ||||  |||    
T  36476520 caaaataattgtcactttagaataccaatgcagcatttattacttttttctattattatacccttatttattgaatttcatcaaacttaactactctact 36476619  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  36476620 aactacaattaataag 36476635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 27471271 - 27471387
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||| |||||||||||| |||||||| ||||||   |||||  ||||| ||||||||||||||||||||||||||| |||| |||    
T  27471271 caaaataattgtcactttataataccaatacagcatttatt-atttttgtccactaccatacctttatttattgaatttcattcaacttaactactccac 27471369  T
Q  98 taactacaattaataaga 115  Q
    ||  || |||||||||||    
T  27471370 tacttataattaataaga 27471387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 30711014 - 30711123
Alignment:
Q  5 ataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaacta 103  Q
    |||||||||| ||||||||| |||||||||||||||| | |||||||||||||||   ||||||||||||||||||  ||||||| | || || ||||||    
T  30711014 ataattgtcattttagaatatcaatacaacatttattatttttttcactattataatcttatttattgaatttcatctaacttaattgctccattaacta 30711113  T
Q  104 caattaataa 113  Q
    ||||||||||    
T  30711114 caattaataa 30711123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 36460595 - 36460479
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||||||||  ||| |||| ||| |||||||  || ||  |||||||||||| |||||||||||||||||| |||||||| |||| || |    
T  36460595 caaaataattgtcactttacgatatcaatgcaatatttattatttgtttccactattatacccttatttattgaatttcatccaacttaattactccatt 36460496  T
Q  99 aactacaattaataaga 115  Q
    |||||||||||||||||    
T  36460495 aactacaattaataaga 36460479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 24569275 - 24569164
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccatt-atttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||||||||| |||||||||   |||||||||||||| |   | ||||||| || ||||| ||||||||||||||||||| |||| |||||    
T  24569275 caaaataattgtcactttacaataccaatgtgacatttatttatttat---ttttatacccttcatttaatgaatttcattcaacttaactactccacta 24569179  T
Q  100 actacaattaataag 114  Q
    |||||||||||||||    
T  24569178 actacaattaataag 24569164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 30190839 - 30190724
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||||||||  |||  ||||||||||  || ||| || |||| |||| ||||| |||||||||||| |||||||| |||| ||||    
T  30190839 caaaataattgtcactttagaataaaaatgtaacatttattattaatttccattattttacccttattaattgaatttcatccaacttaactactccact 30190740  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  30190739 aactacaattaataag 30190724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 37311886 - 37312001
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatt--tatttttc-actattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||||||| |||| |||| || ||||||||  |||||||| | ||||||||  ||||||||||||||||||| || |||| |||| ||||    
T  37311886 aaaataattgtcactttacaatatcaatgcagcatttattattatttttctattattatactcttatttattgaatttcattaaatttaactactccact 37311985  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  37311986 aactacaattaataag 37312001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 38795280 - 38795395
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacattta--tttatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||||||||||||| ||| ||||   |||||||| ||||||||| || || |||||| |||||||| ||||||||  ||| |||     
T  38795280 caaaataattgtcactttagaataccaatgcaatattttattttattttccactattatgcccttttttattaaatttcatccaacttaacaactccacc 38795379  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  38795380 aactacaattaataag 38795395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 12904800 - 12904914
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||| | |||| ||||| |||  | | ||||||| |||||  |||||||||||| |||||||||||||||||| |||||||| |||| ||||    
T  12904800 caaaataattgttaatttataatactaatggagcttttattttttttttccactattatacccttatttattgaatttcatccaacttaattactccact 12904899  T
Q  99 aactacaattaataa 113  Q
    |||||||||||||||    
T  12904900 aactacaattaataa 12904914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 37773145 - 37773028
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttattt-attttt---cactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    ||||||||||||||||||| ||||||||| || ||||||||| ||||||   || ||||||||| ||||||| ||||||||||||||||||| || | ||    
T  37773145 caaaataattgtcactttacaataccaatgcagcatttattttatttttttccattattatacccttatttaatgaatttcattcaacttaactattcca 37773046  T
Q  97 ctaactacaattaataag 114  Q
    || |||| ||||||||||    
T  37773045 ctgactataattaataag 37773028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 17652689 - 17652803
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||||||||||||||  ||| ||  ||||||   |||||| | ||||||||| ||||||||| |||||||| |||||||| ||| ||||||    
T  17652689 caaaataattgtcactttagaatattaatgcagtatttataattttttcaattattatacccttatttattaaatttcatccaacttaactacctcacta 17652788  T
Q  100 actacaattaataag 114  Q
    |||||||||||||||    
T  17652789 actacaattaataag 17652803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 53560152 - 53560268
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||||||||| ||| || |||||||||||||||   || ||| | ||| |||||||||||| |||||||||||||| ||||  ||    
T  53560152 caaaataattgtcactttagaatactaatgcagcatttatttatttttttccattataacacccttatttattgaacttcattcaacttaactactctac 53560251  T
Q  98 taactacaattaataag 114  Q
    |||||| | ||||||||    
T  53560252 taactatatttaataag 53560268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 3901328 - 3901212
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||| ||| | ||||||||||  ||||||||||  |||||  || ||||||||| |||||||||||||||||| |||||||| |||  ||||    
T  3901328 caaaataattgttactcttgaataccaatgtaacatttattatttttttccattattatacccttatttattgaatttcatccaacttaagtaccccact 3901229  T
Q  99 aactacaattaataaga 115  Q
    |||||||| ||||||||    
T  3901228 aactacaactaataaga 3901212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 40462257 - 40462366
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||| |||||||||||||||  |||| |||||||||||| |||  ||||||||||| | |||||||||||||| || |||||||| ||||   ||||    
T  40462257 caaaatagttgtcactttagaatgtcaatgcaacatttatttttttcccactattatacaactatttattgaattttatccaacttaactactcttctaa 40462356  T
Q  101 ctacaattaa 110  Q
    ||||||||||    
T  40462357 ctacaattaa 40462366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 45710785 - 45710900
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttat---ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||| ||||||||||||| |||| |   || |||||||  || | ||| |||||||||||| ||||| |||||||| |||| |||    
T  45710785 caaaataattgtcactttataataccaatacaatatttttattttttttttcataataacacccttatttattgaacttcatccaacttaactactccac 45710884  T
Q  98 taactacaattaataa 113  Q
    ||||||||||||||||    
T  45710885 taactacaattaataa 45710900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 3313188 - 3313305
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatt--tttcactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    ||||||||||||||||||| ||||  ||| || ||||||||  ||||  ||||| |||||||   |||||||||||||||||| ||||||||||||| ||    
T  3313188 caaaataattgtcactttacaatataaatgcagcatttattattattattttcattattataatcttatttattgaatttcatccaacttaaatactcca 3313287  T
Q  97 ctaactacaattaataag 114  Q
     |||||||||||||||||    
T  3313288 ttaactacaattaataag 3313305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 8679188 - 8679118
Alignment:
Q  44 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    |||| |||||||||||| |||||||||||||||||| |||||||| || ||||||||||| ||||||||||    
T  8679188 ttttccactattatacccttatttattgaatttcatccaacttaattaattcactaactataattaataag 8679118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 12736750 - 12736636
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttat-ttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||||||||||||||||  ||||  |  |||||||  | |||||||||||||||| ||||||||||||||| || ||| |||| |||| |||||    
T  12736750 caaaataattgtcactttagaatgtcaatctagtatttattattgttttcactattatacccttatttattgaattttatccaaattaactactacacta 12736651  T
Q  100 actacaattaataag 114  Q
    | |||||||||||||    
T  12736650 agtacaattaataag 12736636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 23004516 - 23004446
Alignment:
Q  44 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    ||||||||| ||| ||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  23004516 tttttcacttttacacccttatttattgaatttcatacaacttaactactccactaactacaattaataag 23004446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 51838139 - 51838023
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||| |||   ||| |||||||||||  |||||   |||||||||||| ||||||| ||||||||||||||| ||| |||| |||    
T  51838139 caaaataattgtcactttacaattataatgcaacatttattattttttttccactattatacccttatttaatgaatttcattcaacgtaactactccac 51838040  T
Q  98 taactacaattaataag 114  Q
    || |||||| |||||||    
T  51838039 tagctacaactaataag 51838023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 52290834 - 52290944
Alignment:
Q  5 ataattgtcactttagaataccaatacaacatttatttattttt-cactattataccattatttattgaatttcattcaacttaaatacttcactaacta 103  Q
    |||||||| |||||||||||||||| || ||||||||  ||||| || ||| ||| | |||||||||||| || ||||||||||| |||| |||||||||    
T  52290834 ataattgtgactttagaataccaatgcagcatttattattttttacattataatatccttatttattgaactttattcaacttaactactccactaacta 52290933  T
Q  104 caattaataag 114  Q
     ||||||||||    
T  52290934 taattaataag 52290944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 11905760 - 11905873
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||||| | | ||||||||| |||| |||||||||||  |||||| | ||||||| | |||||||||||||||||| ||||||||  ||| || |||    
T  11905760 aaaataatttttattttagaatatcaatgcaacatttattattttttccattattatatctttatttattgaatttcatccaacttaacaactccattaa 11905859  T
Q  101 ctacaattaataag 114  Q
    ||||||||||||||    
T  11905860 ctacaattaataag 11905873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 34750445 - 34750547
Alignment:
Q  8 attgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaat 107  Q
    |||||||||||||||||| ||| |||||||| ||| ||    ||||||||||||||||||||| | |||||| ||| |||| |||| ||| |||||||||    
T  34750445 attgtcactttagaatactaattcaacatttttttttt----actattataccattatttattaattttcatccaagttaactactccaccaactacaat 34750540  T
Q  108 taataag 114  Q
    |||||||    
T  34750541 taataag 34750547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 38137625 - 38137509
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||  ||||| ||| ||| |||||||  |||||| |||||||||| | ||||||||||||||||||  || |||| |||  ||||    
T  38137625 caaaataattgtcactttgcaatactaatgcaatatttattattattttccactattatatctttatttattgaatttcatcgaatttaactaccccact 38137526  T
Q  99 aactacaattaataaga 115  Q
    ||||||| |||||||||    
T  38137525 aactacagttaataaga 38137509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 31158689 - 31158601
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaa 88  Q
    |||||||||| |||||||| ||||| ||| ||  ||||||| | ||||||||||||||||||||||||||||||||||||  |||||||    
T  31158689 caaaataattctcactttacaatacaaatgcagtatttattatttttttcactattataccattatttattgaatttcatctaacttaa 31158601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 41038571 - 41038456
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||||||||||| ||||| ||| || ||||||||  |||||  || ||| ||| | |||||||||||| ||||  |||||||| ||||||| ||    
T  41038571 aaaataattgtcactttaaaatacaaatgcagcatttattatttttttccattataatatccttatttattgaacttcaaccaacttaactacttcatta 41038472  T
Q  100 actacaattaataaga 115  Q
    ||||||||||||||||    
T  41038471 actacaattaataaga 41038456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 28690957 - 28690847
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaac 101  Q
    ||||||| ||||| |||| |||| |||| |||||||| ||| |||||  | |||||||  |||||||||||||||||| |||||||| ||  ||||||||    
T  28690957 aaaataactgtcattttacaatatcaatgcaacatttttttttttttatc-attatacatttatttattgaatttcatccaacttaactatctcactaac 28690859  T
Q  102 tacaattaataa 113  Q
    ||||||||||||    
T  28690858 tacaattaataa 28690847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 37804674 - 37804787
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||| |||||||||| |||| ||||||||||||||||||| |||||||||   ||| ||||| ||||| ||  ||||||  || |||||||    
T  37804674 caaaataattgtccctttagaatatcaatgcaacatttatttatttttctactattatattctta-ttatttaattt-atctaacttatttatttcacta 37804771  T
Q  100 actacaattaataaga 115  Q
    ||||||||||||||||    
T  37804772 actacaattaataaga 37804787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 11632053 - 11632131
Alignment:
Q  35 atttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    |||||||  ||||||||||||||||  |||||||||||||||||| |||||||| |  | |||||||||||||||||||    
T  11632053 atttattattttttcactattatacttttatttattgaatttcatccaacttaacttttccactaactacaattaataa 11632131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 34957440 - 34957554
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcact-attataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||| |||||||| |||||||||  ||||||||||  ||||||  | | |||| | ||||||||||||||||||| |||| || |||| |||||    
T  34957440 caaaataattatcactttaaaataccaatgtaacatttattattttttccgttactatatccttatttattgaatttcatttaactgaactactccacta 34957539  T
Q  100 actacaattaataag 114  Q
    |||| ||||||||||    
T  34957540 actataattaataag 34957554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 41351734 - 41351629
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaact 102  Q
    ||||||||||||||||||||||  ||| ||||| ||     ||||| ||  ||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  41351734 aaataattgtcactttagaatattaatgcaacaatt-----tttttgacatttatacctttatttattgaatttcattcaacttaactactccactaact 41351640  T
Q  103 acaattaataa 113  Q
    |  ||||||||    
T  41351639 atcattaataa 41351629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 107
Target Start/End: Original strand, 1778624 - 1778687
Alignment:
Q  44 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaat 107  Q
    ||||||| ||||||||| |||||||||||||||||| |||||||  |||| |||||||||||||    
T  1778624 tttttcattattatacccttatttattgaatttcatccaacttatctactccactaactacaat 1778687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 54726421 - 54726535
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcac--tattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||  |||||||||||| ||| |||||||||||  |||||| |  ||| ||||| ||||||||| || |||||  ||||||| |||| || |    
T  54726421 caaaataattgcaactttagaatactaatgcaacatttattagtttttcccattataatacccttatttattaaacttcatctaacttaactactccatt 54726520  T
Q  99 aactacaattaataa 113  Q
    |||||||||||||||    
T  54726521 aactacaattaataa 54726535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 109
Target Start/End: Complemental strand, 25108699 - 25108594
Alignment:
Q  5 ataattgtcactttagaataccaatacaacatttatttattttt-cactattataccattatttattgaatttcattcaacttaaatacttcactaacta 103  Q
    |||| ||| |||||| |||| ||||| || |||||||||||||| ||||| ||||   |||||||||||||||||||| | |||| ||||||| ||||||    
T  25108699 ataaatgttactttaaaatatcaatataatatttatttattttttcactaatatatttttatttattgaatttcattctatttaactacttcattaacta 25108600  T
Q  104 caatta 109  Q
    | ||||    
T  25108599 cgatta 25108594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 33458985 - 33459097
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||||||| |||||| || |||||||||||||||| | || | |||||||||  | ||||||| | |||||||||||| |||| || |  ||||    
T  33458985 caaaataattgtcattttagattatcaatacaacatttattattttgtccactattatgtc-ttatttaataaatttcattcaatttaagtattctacta 33459083  T
Q  100 actacaattaataa 113  Q
    ||||||||||||||    
T  33459084 actacaattaataa 33459097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 27549464 - 27549350
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||| |||||||||| |||| |||| |||||||||||  |||||   |||||||||| | ||||||||||||||| ||| || |||| |||  ||||    
T  27549464 aaaataactgtcactttacaatatcaatgcaacatttattatttttttcccactattataactttatttattgaatttaatttaatttaactacgccact 27549365  T
Q  99 aactacaattaataa 113  Q
    ||||| || ||||||    
T  27549364 aactataactaataa 27549350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 33491540 - 33491422
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaa-tttcattcaacttaaatacttca 96  Q
    ||||||||||||||||||| ||||| |||  |  ||||||   |||||   |||||||||||| ||||||||| || |||||| |||||||| |||| ||    
T  33491540 caaaataattgtcactttacaatactaatgtagtatttatgatttttttcgcactattatacccttatttattaaaatttcatacaacttaactactcca 33491441  T
Q  97 ctaactacaattaataaga 115  Q
    ||||||| |||||||||||    
T  33491440 ctaactataattaataaga 33491422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 24245269 - 24245158
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttatttatttttca-ctattataccattatttattgaatttcattcaacttaaatacttcactaac 101  Q
    |||||||| |||||||| |||| ||||| |  |||||||  ||||||| ||||||||  ||||||||||||||| ||| | | |||| ||||| |||||     
T  24245269 aaataattatcactttaaaatatcaatatattatttattattttttcaactattatattattatttattgaattgcatccgatttaactactttactaag 24245170  T
Q  102 tacaattaataa 113  Q
    ||||||||||||    
T  24245169 tacaattaataa 24245158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 30682211 - 30682128
Alignment:
Q  34 catttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataagat 116  Q
    ||||||| |||||||| | ||| |||| ||||||||||||||||| | |||||||| || | || |||||||||||||||||||    
T  30682211 catttatatatttttctattatcatactattatttattgaatttcgtccaacttaattattccattaactacaattaataagat 30682128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 5323063 - 5323001
Alignment:
Q  52 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    ||||||||| ||||||||||||||||||  ||||||| ||||| ||||| || ||||||||||    
T  5323063 tattatacccttatttattgaatttcatcaaacttaactactttactaattataattaataag 5323001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 40194477 - 40194555
Alignment:
Q  37 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 115  Q
    |||||| |||| |||||||||| | ||||||||| |||||| | ||||| || |||  |||||||||||||||||||||    
T  40194477 ttattttttttccactattatatctttatttattaaatttcttccaactcaactacgccactaactacaattaataaga 40194555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 42469858 - 42469744
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||||||||||||||| ||||  |||  |||||||| |||||||| | || |||||  ||||||||||||||  | || || ||||||||  |||||    
T  42469858 caaaataattgtcactttaaaatattaatgtaacatttacttatttttaattaatatactcttatttattgaattataatccacctaaatactcaactaa 42469759  T
Q  101 ctacaattaataaga 115  Q
    ||| | |||||||||    
T  42469758 ctagagttaataaga 42469744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 111
Target Start/End: Original strand, 37804796 - 37804833
Alignment:
Q  74 tttcattcaacttaaatacttcactaactacaattaat 111  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  37804796 tttcattcaacttaactacttcactaactacaattaat 37804833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 38705174 - 38705227
Alignment:
Q  62 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 115  Q
    ||||||||||||||||||  ||||||| ||||  ||||||||||||||||||||    
T  38705174 ttatttattgaatttcatctaacttaattactcaactaactacaattaataaga 38705227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 14194534 - 14194594
Alignment:
Q  41 ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaac 101  Q
    |||||| ||| ||||||||| ||||| |||||||||||| |||||||| |||| |||||||    
T  14194534 ttatttgtcattattatacctttattaattgaatttcatccaacttaattactccactaac 14194594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 19611908 - 19611960
Alignment:
Q  62 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    ||||||||||||||||||  ||||||| |||| ||||||| ||||||||||||    
T  19611908 ttatttattgaatttcatcaaacttaactactccactaacaacaattaataag 19611960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30710585 - 30710625
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt 41  Q
    |||||||||||||||||||||||| |||| |||||||||||    
T  30710585 caaaataattgtcactttagaatatcaatgcaacatttatt 30710625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 37741532 - 37741571
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatt 41  Q
    |||||||||||||||||| |||| ||||||||||||||||    
T  37741532 aaaataattgtcactttaaaatatcaatacaacatttatt 37741571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 88
Target Start/End: Original strand, 45811590 - 45811648
Alignment:
Q  31 caacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaa 88  Q
    ||||||||||| | |||||||||| ||||  ||||||||||||||||||||||| ||||    
T  45811590 caacatttattatttttttcactaatatattattatttattgaatttcattcaatttaa 45811648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 115
Target Start/End: Complemental strand, 48541109 - 48541063
Alignment:
Q  69 ttgaatttcattcaacttaaatacttcactaactacaattaataaga 115  Q
    |||||||||||||||||||| ||||  ||||| ||||||||||||||    
T  48541109 ttgaatttcattcaacttaactactcaactaattacaattaataaga 48541063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 49447971 - 49447855
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc---actattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    |||||||  ||||||||||||| | |||| ||  |||||| |||||||    ||||||||||| ||||||||| ||||||||  || |||| || |  ||    
T  49447971 caaaatagctgtcactttagaaaatcaatgcactatttatatatttttttctactattatacccttatttattaaatttcatcaaatttaactattctac 49447872  T
Q  98 taactacaattaataag 114  Q
    |||||||||||||||||    
T  49447871 taactacaattaataag 49447855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 26467101 - 26467161
Alignment:
Q  55 tataccattatttattgaatttcattcaacttaaatacttca--ctaactacaattaataa 113  Q
    |||| ||||||||||||||||||||  ||||||| |||||||   ||||||||||||||||    
T  26467101 tatatcattatttattgaatttcatctaacttaactacttcattataactacaattaataa 26467161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 93
Target Start/End: Original strand, 24703648 - 24703692
Alignment:
Q  49 cactattataccattatttattgaatttcattcaacttaaatact 93  Q
    |||||||||| | |||||||||||||||||| |||||||| ||||    
T  24703648 cactattatatctttatttattgaatttcatccaacttaactact 24703692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 36463062 - 36463010
Alignment:
Q  62 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    ||||||||| |||||||| |||||||| |||| ||| ||| ||||||||||||    
T  36463062 ttatttatttaatttcatccaacttaattactccacaaacaacaattaataag 36463010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 43715242 - 43715282
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt 41  Q
    |||||||||||||||||||||||| ||||  ||||||||||    
T  43715242 caaaataattgtcactttagaatatcaatgtaacatttatt 43715282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 113
Target Start/End: Complemental strand, 54477564 - 54477524
Alignment:
Q  73 atttcattcaacttaaatacttcactaactacaattaataa 113  Q
    |||||||||||||||| |||| || ||||||||||||||||    
T  54477564 atttcattcaacttaactactccattaactacaattaataa 54477524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 4246090 - 4246182
Alignment:
Q  130 gcgacaaaagtttcacgaatatcacacgagaaaagctcaaaagcggtgatttccttgttttatctctttttggttataccatttatctctccc 222  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  4246090 gcgacaaaagtttcacgaatatcacatgagaaaagctcaaaagcggtgatttctttgttttatctctttttggtcataccatttatctctccc 4246182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 6315954 - 6315839
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||||||||||||| |||||||||||  |||||| || ||||||||| |||||||||||||||||| |||||||| |||||||||    
T  6315954 caaaataattgtcactttagaataccaatgcaacatttattattattttccattattatacccttatttattgaatttcatccaacttaactacttcact 6315855  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  6315854 aactacaattaataag 6315839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 1248781 - 1248666
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||||||||||||| |||| |||||||||||  ||||||||| ||||||||| ||||| ||||||||| ||||||||||| |||||||||    
T  1248781 caaaataattgtcactttagaatatcaatgcaacatttattattatttttcattattatacccttattaattgaattttattcaacttaactacttcact 1248682  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  1248681 aactacaattaataag 1248666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 19929882 - 19929997
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||||||||||||| |||||||||||  |||||| || ||||||||| |||||||||||||||||| |||||||| || ||||||    
T  19929882 caaaataattgtcactttagaataccaatgcaacatttattattattttccattattatacccttatttattgaatttcatccaacttaactatttcact 19929981  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  19929982 aactacaattaataag 19929997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 21060569 - 21060682
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttattt-atttttcactattataccattatttattgaatttcattcaacttaaatacttcactaac 101  Q
    |||||||||||||||||||||| |||| || ||||||||| ||||| || ||||||||||||||||||||||||| || |||||||| |||| |||||||    
T  21060569 aaataattgtcactttagaatatcaatgcatcatttattttattttccattattataccattatttattgaattttatccaacttaactactccactaac 21060668  T
Q  102 tacaattaataaga 115  Q
    ||||||||||||||    
T  21060669 tacaattaataaga 21060682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 6753835 - 6753720
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttc-actattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||| |||||||||||||||||| ||||||||||| | |||||| | ||||||||| ||||||||| |||||||| |||||||| |||| ||||    
T  6753835 caaaataattatcactttagaataccaatgcaacatttattatctttttccattattatacccttatttattaaatttcatccaacttaactactccact 6753736  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  6753735 aactacaattaataag 6753720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 6753965 - 6754081
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||| ||||||||| |||||||| ||| |||||  ||  | |||||| |||||||||||||||||| |||||||| |||| ||||    
T  6753965 caaaataattgtcactttataataccaatgcaacattttttttttttttccatcaatatacccttatttattgaatttcatccaacttaactactccact 6754064  T
Q  99 aactacaattaataaga 115  Q
    |||||||||||||||||    
T  6754065 aactacaattaataaga 6754081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 8725186 - 8725071
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||| ||||||||| |||| || || || ||  ||||||||| |||||||| ||||||||||||||||||||||| |||| |||| ||||    
T  8725186 caaaataattgtcattttagaataacaatgcagcagtttttattatttttcattattatactattatttattgaatttcattcaagttaactactccact 8725087  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  8725086 aactacaattaataag 8725071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 40899854 - 40899969
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||||||||||||| || | || ||||||||  |||||| || ||||||||| ||||||||||||||||||  ||||||| |||| ||||    
T  40899854 caaaataattgtcactttagaataacattgcagcatttattattattttccattattatacccttatttattgaatttcatctaacttaactactccact 40899953  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  40899954 aactacaattaataag 40899969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 41496016 - 41496130
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||| ||||| ||| |||||||||||  | |||| |||||||||||| |||||||||| ||||||| ||| |||| |||| ||||    
T  41496016 caaaataattgtcactttacaatactaatgcaacatttattattcttttccactattatacctttatttattgcatttcatccaatttaactactccact 41496115  T
Q  99 aactacaattaataa 113  Q
    |||||||||||||||    
T  41496116 aactacaattaataa 41496130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 40530402 - 40530286
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt---tatttttcactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||| ||||||||| || ||||||||   |||||  |||||||||||| ||||||||| |||||||| ||||||||  ||| |||    
T  40530402 caaaataattgtcactttacaataccaatgcagcatttattatttatttcccactattatacccttatttatttaatttcatccaacttaaccactccac 40530303  T
Q  98 taactacaattaataag 114  Q
    |||||||||||||||||    
T  40530302 taactacaattaataag 40530286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 31654988 - 31655104
Alignment:
Q  1 caaaataattgtcactttagaa-taccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||| || ||||||||||| | |||||  || ||  |||||||||||| ||||||||||||||||||||||| ||| |||| |||    
T  31654988 caaaataattgtcactttaaaaataccaatacaataattattatttatttccactattatacccttatttattgaatttcattcaacataattactccac 31655087  T
Q  98 taactacaattaataag 114  Q
    |||||||||||||||||    
T  31655088 taactacaattaataag 31655104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 4440959 - 4441071
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttatt-tatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||||||||||||| ||||| |  |||||||||||| | |||||| ||||||||||| |||||||||||||||||| ||| |||| |||| ||||||    
T  4440959 aaataattgtcactttataatacgaggacaacatttattatttttttctactattataccgttatttattgaatttcatccaatttaactactccactaa 4441058  T
Q  101 ctacaattaataa 113  Q
    |||||||||||||    
T  4441059 ctacaattaataa 4441071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 4818486 - 4818602
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||| |||||||||  | ||||||||  |||||   |||||||||||| ||||||||||||||||||  |||||||  ||| |||    
T  4818486 caaaataattgtcactttataataccaatgtagcatttattatttttttcccactattatacccttatttattgaatttcatctaacttaatcactccac 4818585  T
Q  98 taactacaattaataag 114  Q
    |||||||||||||||||    
T  4818586 taactacaattaataag 4818602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 6 - 113
Target Start/End: Original strand, 29570332 - 29570442
Alignment:
Q  6 taattgtcactttagaataccaatacaacatttatttattt---ttcactattataccattatttattgaatttcattcaacttaaatacttcactaact 102  Q
    ||||| |||||||| |||||||||||||| ||||||| |||   |||||||||||||  |||||||||||||||||| |||||||| || | || |||||    
T  29570332 taattatcactttacaataccaatacaacgtttatttttttcttttcactattatactcttatttattgaatttcatccaacttaactattccattaact 29570431  T
Q  103 acaattaataa 113  Q
    |||||||||||    
T  29570432 acaattaataa 29570442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 6616057 - 6615942
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatt---tatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||| |||||| || |||||||   ||||| |||| |||||||||||| |||||||||||| ||||| ||||||||  ||| |||    
T  6616057 caaaataattgtcactttacaatacctatgcaacatttattattttttttccactattatacccttatttattgaa-ttcatccaacttaaccactccac 6615959  T
Q  98 taactacaattaataag 114  Q
    |||||| ||||||||||    
T  6615958 taactaaaattaataag 6615942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 8698244 - 8698360
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||| |||| ||||  |  |||||||  |||||   |||||||||||| |||||||||||||||||| ||||||||  ||| |||    
T  8698244 caaaataattgtcactttacaatatcaatgtagtatttattattttttttccactattatacccttatttattgaatttcatccaacttaaccactccac 8698343  T
Q  98 taactacaattaataag 114  Q
    |||||||||||||||||    
T  8698344 taactacaattaataag 8698360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 27542731 - 27542847
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||| |||||||||||| ||| || ||| ||||  |||||  || ||||||||  ||||||||||||||| || |||||||| |||| ||||    
T  27542731 caaaataattgtgactttagaatactaatgcagcatgtattacttttttccattattatactcttatttattgaattttatccaacttaactactccact 27542830  T
Q  99 aactacaattaataaga 115  Q
    |||||||||||||||||    
T  27542831 aactacaattaataaga 27542847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 29374323 - 29374392
Alignment:
Q  44 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    ||||||||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||||||||    
T  29374323 tttttcactattatacccttatttattgaattttattcaatttaactactccactaactacaattaataa 29374392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 3348307 - 3348192
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||| |||||||||||||| || ||||||||  |||||  || ||| ||| | |||||||||||| ||||| |||||||| ||||||||     
T  3348307 caaaataattgtcattttagaataccaatgcagcatttattatttttttccattataatatccttatttattgaacttcatccaacttaattacttcacc 3348208  T
Q  99 aactacaattaataag 114  Q
    ||||||| ||||||||    
T  3348207 aactacatttaataag 3348192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 9515669 - 9515777
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-----tatttttcactattataccattatttattgaatttcattcaacttaaatacttc 95  Q
    ||||||||||||||||||| ||||| ||| || ||||||||     |||||| |||||||||||  ||||||| ||||||||||||||||||| |||| |    
T  9515669 caaaataattgtcactttacaatactaatgcatcatttattattattattttccactattatactcttatttaatgaatttcattcaacttaactactcc 9515768  T
Q  96 actaactac 104  Q
    |||||||||    
T  9515769 actaactac 9515777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 11796341 - 11796230
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||||||||||||||| ||||  |||  | ||||||||| |||| ||||| |||||  ||||||||| ||||||||  ||||||| |||| ||||||    
T  11796341 caaaataattgtcactttaaaataataatgtagcatttattt-ttttccactagtatactcttatttattaaatttcatctaacttaactactacactaa 11796243  T
Q  101 ctacaattaataa 113  Q
    |||||||||||||    
T  11796242 ctacaattaataa 11796230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 2588240 - 2588123
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttattt--atttttcactattataccattatttattgaatttcattcaacttaaatact--tca 96  Q
    |||||||||||||||||||||||| |||| || |||||||||   ||||||| ||| ||||| |||||||||||| || || ||| |||| ||||   ||    
T  2588240 caaaataattgtcactttagaatatcaatgcagcatttattttattttttcattataatacccttatttattgaactttatccaatttaactactgcaca 2588141  T
Q  97 ctaactacaattaataag 114  Q
    ||||||||||||||||||    
T  2588140 ctaactacaattaataag 2588123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 7828058 - 7827988
Alignment:
Q  44 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    ||||||| ||||||| | ||||||||| |||||||| |||||||| |||| ||||||||||||||||||||    
T  7828058 tttttcattattatatccttatttattaaatttcatccaacttaactactccactaactacaattaataag 7827988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 41062336 - 41062222
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||| | |||||||||||||||| ||||||||||| | |||| || ||| ||||| |||||||||||| | ||| || ||||| || |  ||||    
T  41062336 caaaataattataactttagaataccaatgcaacatttattattttttccattataatacccttatttattgaactccatccagcttaattattctacta 41062237  T
Q  100 actacaattaataag 114  Q
    |||||||||||||||    
T  41062236 actacaattaataag 41062222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 27580542 - 27580651
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||||||||||||||| |  |||||| |||||||| |||      || ||||||||  ||||||| | ||||||||||||||||| |||| ||||||    
T  27580542 caaaataattgtcactttacataaccaatgcaacatttttttcc----cattattatacatttatttaattaatttcattcaacttaactactccactaa 27580637  T
Q  101 ctacaattaataag 114  Q
    ||||||||||||||    
T  27580638 ctacaattaataag 27580651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 41480099 - 41480176
Alignment:
Q  15 ctttagaataccaatacaacatttatt----tatttttcactattataccattatttattgaatttcattcaacttaa 88  Q
    |||||||||| |||| |||||||||||    | ||||||||||||||||| |||||||||||||||||| ||||||||    
T  41480099 ctttagaatatcaatgcaacatttattattatttttttcactattatacctttatttattgaatttcatccaacttaa 41480176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 15818659 - 15818545
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||| |||||||||| ||||||||| ||||||| |||  || ||  ||||||||| || ||||||||| |||||||| ||| |||| |||| ||||    
T  15818659 caaaataactgtcactttacaataccaatgcaacattaattacttgtttccactattatgcctttatttattaaatttcatccaatttaactactccact 15818560  T
Q  99 aactacaattaataa 113  Q
     | ||||||||||||    
T  15818559 gattacaattaataa 15818545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 114
Target Start/End: Complemental strand, 22848512 - 22848446
Alignment:
Q  48 tcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    ||||||||||||| |||||||||||||||||| |||  ||| |||| || |||||||||||||||||    
T  22848512 tcactattatacccttatttattgaatttcatccaatctaactactccattaactacaattaataag 22848446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 32439822 - 32439902
Alignment:
Q  16 tttagaataccaatacaacattta---tttatttttcactattataccattatttattgaatttcattcaacttaaatact 93  Q
    ||||||||||||||||||||||||   ||| |||| |||||||||| |  ||||||||||||||||| |||||||| ||||    
T  32439822 tttagaataccaatacaacatttattgttttttttccactattatatccctatttattgaatttcatccaacttaactact 32439902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 2232247 - 2232145
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttatt----tatttttc-actattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    |||||||||||| |||| |||||||||  | ||||||||    | |||||| ||||||||||| |||||||||||||||||| |||||||| |||| |||    
T  2232247 aaataattgtcattttacaataccaatgtagcatttattattatttttttctactattatacccttatttattgaatttcatccaacttaactactccac 2232148  T
Q  98 taa 100  Q
    |||    
T  2232147 taa 2232145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 41492194 - 41492285
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttat--ttattttt--cactattataccattatttattgaatttcattcaacttaa 88  Q
    |||||||||||||||||||||||| ||||| | || ||||  ||||||||  | |||||||| | |||||||||||||||||| ||||||||    
T  41492194 caaaataattgtcactttagaatatcaataaagcacttattattattttttcctctattatatctttatttattgaatttcatccaacttaa 41492285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 30512864 - 30512757
Alignment:
Q  1 caaaataattgtcactttagaa-taccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||| ||||| || ||| ||| ||||||| ||||||||||  ||  |||||| | ||||||||| |||||||| |||||||| || |||||    
T  30512864 caaaataattgtcgctttacaaatactaatgcaacattcatttattttttccatcattatatccttatttattaaatttcatccaacttaactatttcac 30512765  T
Q  98 taactaca 105  Q
    ||||||||    
T  30512764 taactaca 30512757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 30553204 - 30553097
Alignment:
Q  1 caaaataattgtcactttagaa-taccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||| ||||| || ||| ||| ||||||| ||||||||||  ||  |||||| | ||||||||| |||||||| |||||||| || |||||    
T  30553204 caaaataattgtcgctttacaaatactaatgcaacattcatttattttttccatcattatatccttatttattaaatttcatccaacttaactatttcac 30553105  T
Q  98 taactaca 105  Q
    ||||||||    
T  30553104 taactaca 30553097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 41478733 - 41478810
Alignment:
Q  15 ctttagaataccaatacaacatttatt--tatttttc--actattataccattatttattgaatttcattcaacttaa 88  Q
    |||||||||| |||| |||||||||||  |||||||   ||||||||||| |||||||||||||||||| ||||||||    
T  41478733 ctttagaatatcaatgcaacatttattattattttttctactattatacctttatttattgaatttcatccaacttaa 41478810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 42803797 - 42803683
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattt--ttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||| |||| | ||| ||| || ||||||||  |||  || | ||||||||  |||||||||||||||||| ||||||||  ||| || |    
T  42803797 caaaataattgtcattttacagtactaatgcatcatttattattttcttttaatattatactcttatttattgaatttcatccaacttaaccactccatt 42803698  T
Q  99 aactacaattaataa 113  Q
    |||||||||||||||    
T  42803697 aactacaattaataa 42803683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 112
Target Start/End: Complemental strand, 26285592 - 26285542
Alignment:
Q  62 ttatttattgaatttcattcaacttaaatacttcactaactacaattaata 112  Q
    ||||||||||||||| || |||||||| ||||||| |||||||||||||||    
T  26285592 ttatttattgaattttatacaacttaactacttcattaactacaattaata 26285542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 103
Target Start/End: Original strand, 39325834 - 39325903
Alignment:
Q  35 atttatttatttttcactattataccatt-atttattgaatttcattcaacttaaatacttcactaacta 103  Q
    |||||||| |||| |||||||||| |||| ||||||||||||| || |||||||| |||| |||||||||    
T  39325834 atttattttttttccactattatatcatttatttattgaatttaatccaacttaactactccactaacta 39325903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 107
Target Start/End: Complemental strand, 37101378 - 37101274
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaact 102  Q
    |||||||||| | ||||||||||||||| |  |||||||  ||||| | |||||||   ||||||||||||||||||  || |||| ||||  |||||||    
T  37101378 aaataattgttattttagaataccaatatattatttattatttttttattattatatttttatttattgaatttcatcaaatttaattactctactaact 37101279  T
Q  103 acaat 107  Q
    |||||    
T  37101278 acaat 37101274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 108
Target Start/End: Original strand, 843286 - 843333
Alignment:
Q  61 attatttattgaatttcattcaacttaaatacttcactaactacaatt 108  Q
    |||||| ||||||||||||||||||||| ||||| | |||||||||||    
T  843286 attattcattgaatttcattcaacttaattactttattaactacaatt 843333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 18841478 - 18841529
Alignment:
Q  62 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    |||||||||||||||||  ||| |||| || |||||||||||||||||||||    
T  18841478 ttatttattgaatttcacccaatttaattatttcactaactacaattaataa 18841529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 24455130 - 24455024
Alignment:
Q  6 taattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactaca 105  Q
    |||||||||| |||||||| |||||||||||||| |||||||  |||| ||||   ||||||||| ||||||| ||   |||  |||| ||| |||||||    
T  24455130 taattgtcacattagaatatcaatacaacattta-ttattttcgactaatatagtcttatttattaaatttcactccgtttagttactccacaaactaca 24455032  T
Q  106 attaataa 113  Q
    ||||||||    
T  24455031 attaataa 24455024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 115
Target Start/End: Original strand, 29856056 - 29856099
Alignment:
Q  72 aatttcattcaacttaaatacttcactaactacaattaataaga 115  Q
    |||| |||||||||||| |||| |||||||||||||||||||||    
T  29856056 aattgcattcaacttaactactccactaactacaattaataaga 29856099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 11761469 - 11761359
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||||||||| ||||||||| |||  |||||||| |||    | |||||||||||  |||||||||||||| ||  |||||||| || |||||| |    
T  11761469 caaaataattgtcattttagaatagcaaatcaacattttttt----tccactattatacgcttatttattgaattccaaccaacttaactatttcactta 11761374  T
Q  101 ctacaattaataaga 115  Q
     || |||| ||||||    
T  11761373 gtataatttataaga 11761359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 13761667 - 13761576
Alignment:
Q  131 cgacaaaagtttcacgaatatcacacgagaaaagctcaaaagcggtgatttccttgttttatctctttttggttataccatttatctctccc 222  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13761667 cgacaaaagtttcacaaatatcacacgagaaaagctcaaaagtggtgatttccttgttttatctctttttggtcataccatttatctctccc 13761576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 36354619 - 36354504
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||||||||||||||||||| ||  |||||||  |||||| | |||||||||||||||||||||||||||| |||||||| |||| |||||    
T  36354619 caaaataattgtcactttagaataccaatgcagaatttattattttttccattattataccattatttattgaatttcatccaacttaactactccacta 36354520  T
Q  100 actacaattaataaga 115  Q
    ||||||||||||||||    
T  36354519 actacaattaataaga 36354504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 5789824 - 5789710
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||||||||| |||| |||| || ||||||||  |||||| |||||||||||||||||||||||||||||| |||||||| || |||||||    
T  5789824 caaaataattgtcactttacaatatcaatgcatcatttattattttttccactattataccattatttattgaatttcatccaacttaactatttcacta 5789725  T
Q  100 actacaattaataag 114  Q
    |||||||||||||||    
T  5789724 actacaattaataag 5789710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 34225527 - 34225641
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||||||| |||||||||| ||  |||||||  | ||||||| ||||||||| ||||||||| |||||||||||||||||||||| || ||    
T  34225527 aaaataattgtcactttggaataccaatgcagtatttattattttttttcattattatacccttatttattaaatttcattcaacttaaatactccatta 34225626  T
Q  100 actacaattaataag 114  Q
    |||||||||||||||    
T  34225627 actacaattaataag 34225641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 9458442 - 9458328
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||||||||||||||||||| || ||||||||  |||||| | ||||||||| ||||||||| |||||||| |||||| | |||| |||||    
T  9458442 caaaataattgtcactttagaataccaatgcagcatttattattttttccattattatacccttatttattaaatttcatccaactttactactccacta 9458343  T
Q  100 actacaattaataag 114  Q
    |||||||||||||||    
T  9458342 actacaattaataag 9458328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 5272314 - 5272204
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttatttttcac--tattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||||| |  ||||||||| |||||||||||||||||| ||| |||| |||| |||||    
T  5272314 aaaataattgtcactttagaatacaaatgcaacatttatt-atttttcccattattatacccttatttattgaatttcatccaatttaattactccacta 5272216  T
Q  100 actacaattaat 111  Q
    ||||||||||||    
T  5272215 actacaattaat 5272204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 14523549 - 14523434
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||||||||||||| |||| |||||||||||  |||||| || ||||||| | ||||| ||||||||||||  ||||||| |||| ||||    
T  14523549 caaaataattgtcactttagaatatcaatgcaacatttattattattttccattattatatccttattaattgaatttcatctaacttaactactccact 14523450  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  14523449 aactacaattaataag 14523434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 17695264 - 17695382
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tattttt--cactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    |||||||||||||||||||||||| |||| || ||||||||  |||||||  |||||||||||| |||||||||||||||||| |||||||| ||||  |    
T  17695264 caaaataattgtcactttagaatatcaatgcagcatttattattattttttccactattatacccttatttattgaatttcatccaacttaactactcta 17695363  T
Q  97 ctaactacaattaataaga 115  Q
    ||||||| |||||||||||    
T  17695364 ctaactataattaataaga 17695382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 19937323 - 19937437
Alignment:
Q  4 aataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||||||||||||| ||| |||| ||||||||| || |||||   || ||||||||| ||||||||||||||| ||||||||||| |||| ||||||    
T  19937323 aataattgtcactttagtataacaatgcaacatttaatttttttttcccattattatacctttatttattgaattttattcaacttaactactccactaa 19937422  T
Q  101 ctacaattaataaga 115  Q
    |||||||||||||||    
T  19937423 ctacaattaataaga 19937437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 43410363 - 43410477
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||||||||||||||||| ||| |||||||||||  |||||  || ||||||||  | ||||||||||||||||||||||||| |||| || ||    
T  43410363 aaaataattgtcactttagaatactaatgcaacatttattatttttttccattattatactctcatttattgaatttcattcaacttaactactccatta 43410462  T
Q  100 actacaattaataag 114  Q
    |||||||||||||||    
T  43410463 actacaattaataag 43410477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 37322365 - 37322479
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||||||||||||||||||| ||  | ||||||||  |||||| | ||||||||| ||||||||||||||||||  ||||||| |||| |||||    
T  37322365 caaaataattgtcactttagaatacctatgtagcatttattattttttccattattatacccttatttattgaatttcatctaacttaactactccacta 37322464  T
Q  100 actacaattaataag 114  Q
    |||||||||||||||    
T  37322465 actacaattaataag 37322479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 7495016 - 7494909
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt---tatttttcactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||||||||||||| || ||||||||   | ||||||| ||||||||| |||||||||||||||||| |||||||| |||| | |    
T  7495016 caaaataattgtcactttagaataccaatgcagcatttattatttttttttcattattatacccttatttattgaatttcatccaacttaactactccgc 7494917  T
Q  98 taactaca 105  Q
    ||||||||    
T  7494916 taactaca 7494909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 35313823 - 35313938
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||| ||||  ||| |||||||||||  |||||  |||||||||||  ||||||||||||||||||  ||||||| |||| ||||    
T  35313823 caaaataattgtcactttacaataataatgcaacatttattacttttttccactattatactcttatttattgaatttcatcaaacttaactactccact 35313922  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  35313923 aactacaattaataag 35313938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 16463623 - 16463740
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tattttt--cactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    ||||||||||||||||||||||||||||| || ||||||||  |||||||  || |||| |||||||||||||| ||||||||  ||||| | |||| ||    
T  16463623 caaaataattgtcactttagaataccaatgcagcatttattattattttttccattattttaccattatttattaaatttcatcaaactttactactcca 16463722  T
Q  97 ctaactacaattaataag 114  Q
    ||||||||||||||||||    
T  16463723 ctaactacaattaataag 16463740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 113
Target Start/End: Complemental strand, 35242461 - 35242360
Alignment:
Q  14 actttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaat 111  Q
    |||||||||||||||| ||| |||||||  || |||||||||||||||  |||||||||||||||||| |||||||| ||||  ||||||||||||||||    
T  35242461 actttagaataccaatgcaatatttattattagttttcactattatacttttatttattgaatttcatccaacttaactactcaactaactacaattaat 35242362  T
Q  112 aa 113  Q
    ||    
T  35242361 aa 35242360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 39785521 - 39785637
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcac--tattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||||||||||||| || |||||| |  |||||| |  ||| ||||| |||||||||||| ||||| |||||||| |||| || |    
T  39785521 caaaataattgtcactttagaataccaatgcagcatttactattttttcccattataatacccttatttattgaacttcatccaacttaactactccatt 39785620  T
Q  99 aactacaattaataaga 115  Q
    |||||||||||||||||    
T  39785621 aactacaattaataaga 39785637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 36794220 - 36794335
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||| |||||||| ||||||||| || ||||||||  | ||||||| ||| ||||| |||||||||||| ||||| |||||||| |||| ||||    
T  36794220 caaaataattatcactttaaaataccaatgcagcatttattattttttttcattataatacccttatttattgaacttcatccaacttaactactccact 36794319  T
Q  99 aactacaattaataag 114  Q
    ||||||| ||||||||    
T  36794320 aactacagttaataag 36794335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 45235515 - 45235632
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt----tatttttcactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    ||||||||||||||||||| ||||||||| |||||||||||    | ||||||| || |||| | ||||||||||||||||||  ||||||| || ||||    
T  45235515 caaaataattgtcactttataataccaatgcaacatttattattatttttttcattactatatccttatttattgaatttcatcaaacttaactatttca 45235614  T
Q  97 ctaactacaattaataag 114  Q
     |||||||||||||||||    
T  45235615 ttaactacaattaataag 45235632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 3323449 - 3323335
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc--actattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||| |||||||| ||||||||| || ||||||||  ||||||  ||||||| ||  ||| |||||||||||||| |||||||| |||| ||||    
T  3323449 caaaataattctcactttacaataccaatgcagcatttattattttttcccactattacactcttacttattgaatttcatccaacttaactactccact 3323350  T
Q  99 aactacaattaataa 113  Q
    |||||||||||||||    
T  3323349 aactacaattaataa 3323335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 8947231 - 8947114
Alignment:
Q  1 caaaataattgtcactttagaa---taccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    |||||||||||||| |||| ||   ||||||| ||| ||||||| | ||||||| ||||||||| |||||||||||||||||| |||||||| |||| ||    
T  8947231 caaaataattgtcattttacaacaataccaatgcaatatttattatttttttcattattatacccttatttattgaatttcatccaacttaactactcca 8947132  T
Q  97 ctaactacaattaataag 114  Q
    ||||||| ||||||||||    
T  8947131 ctaactataattaataag 8947114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 34120614 - 34120500
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||| ||||||||| || ||||||||  |||||  || ||||||||  ||| |||||||||||||| |||||||| || | ||||    
T  34120614 caaaataattgtcactttaaaataccaatgcagcatttattatttttttccattattatactcttacttattgaatttcatccaacttaactattccact 34120515  T
Q  99 aactacaattaataa 113  Q
    |||||||||||||||    
T  34120514 aactacaattaataa 34120500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 16377832 - 16377718
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaac----ttaaatacttca 96  Q
    |||||||||||||| ||||||||| |||| |||||||| |||   ||||||||||||||  |||||||||||||||||| ||||    |||| |||| ||    
T  16377832 caaaataattgtcattttagaatatcaatgcaacattttttt---tttcactattatacttttatttattgaatttcatccaacttaattaactactcca 16377736  T
Q  97 ctaactacaattaataag 114  Q
    ||||||||||||||||||    
T  16377735 ctaactacaattaataag 16377718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 25637416 - 25637531
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacat---ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||||||||||||| || |||   |||||| |||| || ||||| ||| ||||||||| |||||||| |||||||| |||| |      
T  25637416 caaaataattgtcactttagaataccaatgcagcatttattattttttttccattattacacccttatttattaaatttcatccaacttaactactccta 25637515  T
Q  98 taactacaattaataa 113  Q
    ||||||||||||||||    
T  25637516 taactacaattaataa 25637531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 15359266 - 15359149
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt----tatttttcactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    |||||||||||| ||||||||||| |||| ||  |||||||    | ||||||| ||| ||||| |||||||||||| ||||| |||||||| |||| ||    
T  15359266 caaaataattgttactttagaatatcaatgcagtatttattagtatttttttcattataatacccttatttattgaacttcatccaacttaactactcca 15359167  T
Q  97 ctaactacaattaataag 114  Q
    ||||||||||||||||||    
T  15359166 ctaactacaattaataag 15359149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 38188059 - 38187947
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||| ||| ||||| |||||||||||||  ||||||||||| ||||||| |||  |||||||||||||||||||||||| |  ||||| |||||  ||||    
T  38188059 caaactaaatgtcattttagaataccaaatcaacatttattaatttttccactcatataccattatttattgaatttcacttcacttacatactcgacta 38187960  T
Q  100 actacaattaata 112  Q
    |||||||||||||    
T  38187959 actacaattaata 38187947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 7439030 - 7438917
Alignment:
Q  1 caaaataattgtcactttagaataccaa-tacaacatttatttatttttc--actattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    |||||||||||||||||| ||||| ||| |||| ||||||||  ||| ||  ||||||||||| ||||||||||||||||||||||||||| |||| ||     
T  7439030 caaaataattgtcacttttgaatatcaaatacatcatttattattttgtcccactattatacccttatttattgaatttcattcaacttaactactccaa 7438931  T
Q  98 taactacaattaat 111  Q
    ||| || |||||||    
T  7438930 taattataattaat 7438917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 34451509 - 34451400
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||||||||||||||||||| |||| ||||||||| || |||  || |||||| || |||||||||||||||||| ||||| || || |||| |||    
T  34451509 caaaataattgtcactttagaatatcaatgcaacatttaatt-tttcccagtattatgcctttatttattgaatttcatccaactaaactatttcaataa 34451411  T
Q  101 ctacaattaat 111  Q
    ||| |||||||    
T  34451410 ctagaattaat 34451400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 115
Target Start/End: Original strand, 39691468 - 39691542
Alignment:
Q  41 ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 115  Q
    ||||||| || ||||||||| ||||||||||||||||||||||||| | |||| |||||||| ||||||||||||    
T  39691468 ttattttccattattatacccttatttattgaatttcattcaactttactactccactaactgcaattaataaga 39691542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 25904723 - 25904813
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttc-actattataccattatttattgaatttcattcaacttaa 88  Q
    ||||||||||||||||||| ||||  ||| || ||||||||  |||||||| ||||||||||| | |||||||||||||||||||||||||    
T  25904723 caaaataattgtcactttaaaatattaatgcatcatttattattatttttccactattataccctaatttattgaatttcattcaacttaa 25904813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 115
Target Start/End: Complemental strand, 43115926 - 43115863
Alignment:
Q  52 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 115  Q
    |||||||||||||||  |||||||||||||||||||| |||| ||||||||||||| |||||||    
T  43115926 tattataccattattcgttgaatttcattcaacttaactactccactaactacaataaataaga 43115863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 17346535 - 17346425
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaact 102  Q
    ||||||||||||||||| |||||||||  || || |||   |||| || ||||| | | |||||||||||||||| | |||||||| |||| ||||||||    
T  17346535 aaataattgtcactttaaaataccaatgtaatatatatcacttttccattattacatctttatttattgaatttcttccaacttaactactccactaact 17346436  T
Q  103 acaattaataa 113  Q
    |||||||||||    
T  17346435 acaattaataa 17346425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 18202041 - 18202157
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||| |||||||||| || ||||| ||  |||||   || ||| ||||  ||||||||| |||||||| |||||||| |||||||||    
T  18202041 aaaataattgtcactttcgaataccaatgcagcatttgttatttttttcccattataatacatttatttattaaatttcatccaacttaactacttcact 18202140  T
Q  99 aactacaattaataaga 115  Q
    ||||||| |||| ||||    
T  18202141 aactacatttaacaaga 18202157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 26608315 - 26608204
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||||||||||||||| |||||  ||  |||||  |||| ||||||| ||||||||| ||||||| | | ||||||||||||||| || | ||||||    
T  26608315 caaaataattgtcactttacaatactcatgtaacat--attt-tttttcattattatacccttatttaattattttcattcaacttaactaatccactaa 26608219  T
Q  101 ctacaattaataaga 115  Q
    ||| |||||||||||    
T  26608218 ctataattaataaga 26608204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 113
Target Start/End: Complemental strand, 26863496 - 26863421
Alignment:
Q  38 tatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    ||||| |||| |||||||||||  ||||||| |||||||||| | |||||| |||| |||||||||||||||||||    
T  26863496 tatttcttttccactattatacatttatttaatgaatttcatccgacttaactactccactaactacaattaataa 26863421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 11742706 - 11742590
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactatta---taccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||||||||| |||  ||||||||||  |||||  | || |   |||| |||||||||||| |||||  ||||||| |||| ||     
T  11742706 caaaataattgtcactttagaatacgaatgaaacatttattattttttttccatgacaatacccttatttattgaacttcatcaaacttaactactccat 11742607  T
Q  98 taactacaattaataag 114  Q
    |||||||||||||||||    
T  11742606 taactacaattaataag 11742590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 12520992 - 12520936
Alignment:
Q  44 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||| |||||||||||| |||||||||||| ||||||||||| || ||||||||    
T  12520992 tttttcattattataccattttttattgaattttattcaacttaactatttcactaa 12520936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 19444083 - 19444196
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttat--ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||||||||| | |||| |||| ||||||||||  || |||| || ||||||||| || ||||||||| || || || ||||| ||||  ||||    
T  19444083 aaaataattgtcacttcaaaatatcaatgcaacatttattatttttttacattattatacccttgtttattgaaatttatccatcttaactactcgacta 19444182  T
Q  100 actacaattaataa 113  Q
    | ||||||||||||    
T  19444183 attacaattaataa 19444196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 32831348 - 32831238
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaact 102  Q
    |||||||||| | |||||||||  ||||||| |||| ||  || ||  ||| |||||||||||||||||||||||||   | |||| |||| || |||||    
T  32831348 aaataattgttattttagaatataaatacaatattttttgtttgtttgctaatataccattatttattgaatttcatctcatttaactactccaataact 32831249  T
Q  103 acaattaataa 113  Q
    |||||||||||    
T  32831248 acaattaataa 32831238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 31448812 - 31448755
Alignment:
Q  57 taccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    |||| |||||||||||||||||| |||||||| || |||||||||| |||||| ||||    
T  31448812 tacccttatttattgaatttcatccaacttaactatttcactaactgcaattagtaag 31448755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 43699736 - 43699672
Alignment:
Q  35 atttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||||||||| |||||||||||| || |||||||||||| || |||||||| |||| ||||||    
T  43699736 atttatttatttt-cactattatacccttgtttattgaattttatccaacttaattactccactaa 43699672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 16028296 - 16028351
Alignment:
Q  44 tttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||||||  ||||||||||||||||| || |||||| ||||| ||||    
T  16028296 tttttcactattatacatttatttattgaatttcactccacttaactactttacta 16028351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 18853333 - 18853262
Alignment:
Q  44 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 115  Q
    |||||||||| | || | |||||||||||||||||| ||| |||| ||||  ||||||||||| ||||||||    
T  18853333 tttttcactaatgtatccttatttattgaatttcatccaaattaattactctactaactacaactaataaga 18853262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 28186150 - 28186265
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttc-actattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||| ||||  ||| ||  ||| ||| |||||||| ||||||||    ||||||||||||||||||||||||||| ||||   ||    
T  28186150 caaaataattgtcactttataatataaatgcagtattaattatatttttccactattatttttttatttattgaatttcattcaacttaactactctgct 28186249  T
Q  99 aactacaattaataag 114  Q
    ||||| ||| ||||||    
T  28186250 aactaaaatgaataag 28186265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 39329795 - 39329725
Alignment:
Q  44 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 115  Q
    |||| ||||||| || | |||||||||||||||||| ||| |||| |||| || ||||||||||||||||||    
T  39329795 ttttccactattgtatcgttatttattgaatttcatccaatttaactactcca-taactacaattaataaga 39329725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 8928547 - 8928592
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttatttattttt 48  Q
    ||||||||||||||||| ||||||||| ||  ||||||||||||||    
T  8928547 aaataattgtcactttataataccaatgcagtatttatttattttt 8928592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 16805829 - 16805932
Alignment:
Q  12 tcactttagaataccaatacaacatttattta--tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaatta 109  Q
    ||||||||||||| |||| || ||||||||    ||||||| |||||| || |||| |||| ||||| || ||||||||  ||| |||||||||||||||    
T  16805829 tcactttagaatatcaatgcatcatttattatcttttttcattattatccc-ttatctattaaatttaatccaacttaacaactccactaactacaatta 16805927  T
Q  110 ataag 114  Q
    |||||    
T  16805928 ataag 16805932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 16845110 - 16845213
Alignment:
Q  12 tcactttagaataccaatacaacatttattta--tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaatta 109  Q
    ||||||||||||| |||| || ||||||||    ||||||| |||||| || |||| |||| ||||| || ||||||||  ||| |||||||||||||||    
T  16845110 tcactttagaatatcaatgcatcatttattatcttttttcattattatccc-ttatctattaaatttaatccaacttaacaactccactaactacaatta 16845208  T
Q  110 ataag 114  Q
    |||||    
T  16845209 ataag 16845213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 28170715 - 28170646
Alignment:
Q  44 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    ||||||||||||||||  |||||||| ||||||||| ||| |||| || |  | ||||||||||||||||    
T  28170715 tttttcactattatactcttatttatagaatttcatccaatttaattattctattaactacaattaataa 28170646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34120698 - 34120658
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt 41  Q
    ||||||||||||||||||| ||||||||| || ||||||||    
T  34120698 caaaataattgtcactttaaaataccaatgcagcatttatt 34120658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 7e-36; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 22772015 - 22771900
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||||||||||||| |||||||||||  || |||||| ||||||||| |||||||||||||||||| |||| ||| |||||||||    
T  22772015 caaaataattgtcactttagaataccaatgcaacatttattattacttttcattattatacccttatttattgaatttcatccaacataattacttcact 22771916  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  22771915 aactacaattaataag 22771900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 10180126 - 10180012
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||  | ||||||||  ||||| ||||||||||||||||||||| |||| |||||    
T  10180126 aaaataattgtcactttagaataccaatgcaacatttattattattttctattattatacacttattaattgaatttcattcaacttaactactccacta 10180027  T
Q  100 actacaattaataag 114  Q
    |||||||||||||||    
T  10180026 actacaattaataag 10180012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 39405698 - 39405812
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||||||||||||| |||| || ||||||||  ||||||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||    
T  39405698 caaaataattgtcactttagaatatcaatgcagcatttattattatttttcactattatacccttatttatttaatttcattcaacttaattactccact 39405797  T
Q  99 aactacaattaataa 113  Q
    ||||  |||||||||    
T  39405798 aactgtaattaataa 39405812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 21216279 - 21216166
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||    |||||||||||||  ||||||||||||||| |||||||| |||| ||||    
T  21216279 aaaataattgtcactttacaataccaatgcaacatttatttatttttttctactattataccat--tttattgaatttcatccaacttaactactccact 21216182  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  21216181 aactacaattaataag 21216166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 396790 - 396676
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||| ||||||||| ||||| ||||||||| || |||  ||| ||||||| ||    
T  396790 aaaataattgtcactttagaataccaatgcaacatttattattatttttcattattatacccttattaattgaattttatccaatataactacttcatta 396691  T
Q  100 actacaattaataag 114  Q
    |||||||||||||||    
T  396690 actacaattaataag 396676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 29226707 - 29226592
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||||||||| |||| |||| || |||||||| ||||||||| |||| |||| ||||||||||||||||||  ||||||| |||| |||||    
T  29226707 caaaataattgtcactttaaaatatcaatgcagcatttattatatttttcattattgtacccttatttattgaatttcatctaacttaactactccacta 29226608  T
Q  100 actacaattaataaga 115  Q
    ||||||||||||||||    
T  29226607 actacaattaataaga 29226592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 45425847 - 45425730
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||| |||| ||||  ||||||||||  |||||   |||||||||||| |||||||||||||||||| |||||||| |||| |||    
T  45425847 caaaataattgtcactttacaatatcaatgtaacatttattattttttttccactattatacccttatttattgaatttcatacaacttaattactccac 45425748  T
Q  98 taactacaattaataaga 115  Q
    ||||||||||||||||||    
T  45425747 taactacaattaataaga 45425730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 17719436 - 17719323
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttatt-tattttt-cactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||||||||||||||||||||||| ||||||||||| | ||||| || ||||||||| ||||||||| |||||||| |||||||| |||| ||||||    
T  17719436 aaataattgtcactttagaataccaatgcaacatttattatctttttccattattatacctttatttattaaatttcatccaacttaactactccactaa 17719337  T
Q  101 ctacaattaataag 114  Q
    ||| ||||||||||    
T  17719336 ctataattaataag 17719323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 34948865 - 34948753
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||||| |||||||||||||||| ||| ||||||| | ||||||| | ||||||| |||||||||||||||||| |||||||| |||| |||||    
T  34948865 caaaataattgttactttagaataccaatgcaatatttattatttttttcattgttatacc-ttatttattgaatttcatccaacttaactactccacta 34948767  T
Q  100 actacaattaataa 113  Q
    ||||||||||||||    
T  34948766 actacaattaataa 34948753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 4428529 - 4428417
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||||||||||||||||||| ||||  |||| |||||  |||| |||||||||||  ||||||||||||||||||  ||||||| || ||||||||    
T  4428529 caaaataattgtcactttagaatatcaatgtaacaattattatttttccactattatacttttatttattgaatttcatctaacttaactaattcactaa 4428430  T
Q  101 ctacaattaataa 113  Q
    |||||||||||||    
T  4428429 ctacaattaataa 4428417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 17823858 - 17823971
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattt--ttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||| |||| |||| |||||||| ||||||| ||||  | ||||||||||| |||||||||| |||||||| |||||||| |||||||||    
T  17823858 caaaataattgtcaatttataataacaatacaatatttatt-atttcctccactattatactattatttatttaatttcatccaacttaactacttcact 17823956  T
Q  99 aactacaattaataa 113  Q
    |||||||||||||||    
T  17823957 aactacaattaataa 17823971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 32476224 - 32476338
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||||||||||||||||||| || | | |||| | ||||||| | ||||||| ||||||||||||||||||  ||||||| ||||||| ||    
T  32476224 caaaataattgtcactttagaataccaatgcagcgtatattatttttttcattgttatacccttatttattgaatttcatcaaacttaactacttcatta 32476323  T
Q  100 actacaattaataag 114  Q
    |||||||||||||||    
T  32476324 actacaattaataag 32476338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 41091937 - 41092046
Alignment:
Q  5 ataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactac 104  Q
    ||||||| || ||||||||| |||| || ||||||||||||||||||||||||||| |||||||||||||| || | |||||||||| ||  ||||||||    
T  41091937 ataattgccaatttagaatatcaatgcagcatttatttatttttcactattatacccttatttattgaattaca-taaacttaaatatttttctaactac 41092035  T
Q  105 aattaataaga 115  Q
    |||||||||||    
T  41092036 aattaataaga 41092046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 44761672 - 44761559
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacat-ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||||||||| ||||||||| || ||| ||| || |||| |||||||||||| | |||||||||||||||| |||||||| |||| |||||    
T  44761672 caaaataattgtcactttacaataccaatgcagcatattagtt-ttttccactattataccctcatttattgaatttcatccaacttaactactccacta 44761574  T
Q  100 actacaattaataag 114  Q
    |||||||||||||||    
T  44761573 actacaattaataag 44761559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 13335153 - 13335266
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||||||||||||||||||| ||||||||||| | |||| || ||||||||| | ||||||||||||||||  ||||||| ||||  ||||    
T  13335153 caaaataattgtcactttagaataccaatgcaacatttattattttttccattattataccctgatttattgaatttcatcaaacttaactactctacta 13335252  T
Q  100 actacaattaataa 113  Q
    ||| ||||||||||    
T  13335253 actgcaattaataa 13335266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 40996541 - 40996430
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||||| || ||  || |||||||||||||||||| ||||||||  | ||||||||    
T  40996541 caaaataattgtcactttagaataccaatgcaacattcattt-tttttcattagtacccc-ttatttattgaatttcatccaacttaaccatttcactaa 40996444  T
Q  101 ctacaattaataag 114  Q
    ||||||||||||||    
T  40996443 ctacaattaataag 40996430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 39301136 - 39301021
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||| ||||||||| ||||  | | ||||||  |||||| || ||||||||  |||||||||||||||||||||||| || |||||||||    
T  39301136 caaaataattgtcattttagaatatcaatgaatcgtttattattattttccattattatacttttatttattgaatttcattcaactgaactacttcact 39301037  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  39301036 aactacaattaataag 39301021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 10098172 - 10098056
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    |||||||||||| ||||||||||||||||||| ||||||||  |||||   || ||| ||| | |||||||||||| ||||| |||||||| |||| |||    
T  10098172 caaaataattgttactttagaataccaatacatcatttattattttttttccattataatatctttatttattgaacttcatccaacttaactactccac 10098073  T
Q  98 taactacaattaataag 114  Q
    |||||||||||||||||    
T  10098072 taactacaattaataag 10098056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 7172895 - 7172964
Alignment:
Q  44 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    |||| |||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  7172895 ttttccactattatacccttatttattgaatttcattcaacttaactacttcattaactacaattaataa 7172964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 9300295 - 9300178
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt----cactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    ||||||||||||||||||| ||||||||| ||  |||||||  || ||    |||||||||| | ||||||||||||||||||||||||||| |||| ||    
T  9300295 caaaataattgtcactttacaataccaatgcagtatttattatttctttccccactattatatccttatttattgaatttcattcaacttaactactcca 9300196  T
Q  97 ctaactacaattaataag 114  Q
    ||||||| ||||||||||    
T  9300195 ctaactaaaattaataag 9300178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 26626292 - 26626177
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcac--tattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||| |||| |||| || ||||||||  |||||| |  ||||||||| |||||||||||||||||||||||   | |||| ||||    
T  26626292 caaaataattgtcactttaaaatatcaatgcagcatttattattttttcccattattatacccttatttattgaatttcattcaaccggactactccact 26626193  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  26626192 aactacaattaataag 26626177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 14855115 - 14855000
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttattttt----cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    |||||||||||||||||| ||||  ||| ||| |||||||  |||||    ||||||||||||||| |||||||||||||||||| | ||| |||| |||    
T  14855115 aaaataattgtcactttacaatattaatgcaatatttattatttttttttccactattataccattctttattgaatttcattcagcctaactactccac 14855016  T
Q  98 taactacaattaataa 113  Q
    ||||||||||||||||    
T  14855015 taactacaattaataa 14855000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 36007069 - 36006954
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttat----ttttcactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    ||||||||||||||||||||||||| ||| ||||| |||||| |    ||||||||||||| |  ||||||||||||||||||  ||||||| |||  ||    
T  36007069 caaaataattgtcactttagaatactaatgcaacaattatttttatttttttcactattatgctcttatttattgaatttcatcaaacttaattacccca 36006970  T
Q  97 ctaactacaattaata 112  Q
    ||||||||||||||||    
T  36006969 ctaactacaattaata 36006954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 10953912 - 10953813
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||||||||||||||  |||||||| ||||||||| |||||||||| ||||||||| |||| |||||||||| ||  ||||||| |||| ||||||    
T  10953912 caaaataattgtcactttacgataccaatgcaacattta-ttatttttcattattatacccttatatattgaatttgatctaacttaactactccactaa 10953814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 10961917 - 10961818
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||||||||||||||  |||||||| ||||||||| |||||||||| ||||||||| |||| |||||||||| ||  ||||||| |||| ||||||    
T  10961917 caaaataattgtcactttacgataccaatgcaacattta-ttatttttcattattatacccttatatattgaatttgatctaacttaactactccactaa 10961819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 5053332 - 5053217
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||||||||| |||| |||| |||||||||||| |||  | | ||||||||  ||||||||||||| |||| ||| |||| |||| | |||    
T  5053332 caaaataattgtcactttaaaatatcaatgcaacatttatttttttccccattattatactcttatttattgaatctcatccaatttaactactccgcta 5053233  T
Q  100 actacaattaataaga 115  Q
    ||||||||||||||||    
T  5053232 actacaattaataaga 5053217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 31231667 - 31231781
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||| |||| ||||||||| || ||||||||  |||||  || ||| ||||| |||||||||||| || || |||||||| |||| |||||    
T  31231667 aaaataattgtcattttataataccaatgcatcatttattatttttttccattataatacccttatttattgaactttatccaacttaactactccacta 31231766  T
Q  100 actacaattaataag 114  Q
    |||||||||||||||    
T  31231767 actacaattaataag 31231781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 39466217 - 39466103
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaa-cttaaatacttcact 98  Q
    |||||||||| |||||||| |||||| |||||||||||||| | ||||||||||||||| | ||||||||||||||| || |||  |||| |||| ||||    
T  39466217 caaaataattatcactttacaataccgatacaacatttattatttttttcactattatatccttatttattgaattttatccaattttaactactgcact 39466118  T
Q  99 aactacaattaataa 113  Q
    ||| || ||||||||    
T  39466117 aaccacgattaataa 39466103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 39482548 - 39482666
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc-----actattataccattatttattgaatttcattcaacttaaatacttc 95  Q
    ||||||||||||||||||| ||||||||| ||  |||||||  ||||||     | ||||||||| |||||||||||||||||||| |||||| || | |    
T  39482548 caaaataattgtcactttacaataccaatgcagtatttattattttttcccactattattatacccttatttattgaatttcattccacttaactagtcc 39482647  T
Q  96 actaactacaattaataag 114  Q
    |||||||| ||||||||||    
T  39482648 actaactataattaataag 39482666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 115
Target Start/End: Original strand, 1739483 - 1739595
Alignment:
Q  4 aataattgtcactttagaataccaatacaacatttatttatttt-tcactattataccattatttattgaatttcattcaacttaaatacttcactaact 102  Q
    ||||||| ||| ||| ||||| ||||  ||||||||||| |||| ||||| ||||||| ||||||||| ||||||||  || |||| ||||| |||||||    
T  1739483 aataattatcattttcgaatatcaatgtaacatttattttttttctcacttttatacccttatttattaaatttcatcaaaattaactacttaactaact 1739582  T
Q  103 acaattaataaga 115  Q
    |||||||||||||    
T  1739583 acaattaataaga 1739595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 11977115 - 11977001
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||| |||| ||||| |||  | ||||||||  |||||  | |||||||||| ||||||||||||||||||  ||||||| ||||  ||||    
T  11977115 aaaataattgtcattttacaatactaatgtagcatttattatttttttccgctattatacctttatttattgaatttcatctaacttaactactctacta 11977016  T
Q  100 actacaattaataag 114  Q
    |||||||||||||||    
T  11977015 actacaattaataag 11977001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 115
Target Start/End: Original strand, 31270974 - 31271073
Alignment:
Q  16 tttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 115  Q
    |||||||||| ||| ||| |||||||  ||||| | || |||||| ||||||||||||||| || |||||||| |||| ||||||||| |||||||||||    
T  31270974 tttagaatactaatgcaatatttattatttttttattactatacccttatttattgaattttatccaacttaactactccactaactataattaataaga 31271073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 2767475 - 2767383
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatact 93  Q
    ||||||||||||||||||||||| |||||||||||||||  | |||| || ||| ||||| |||||||||||| || || |||||||| ||||    
T  2767475 aaataattgtcactttagaatactaatacaacatttattacttttttccaatataatacccttatttattgaacttaatccaacttaactact 2767383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 36967310 - 36967390
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcatt 80  Q
    |||||||||||| ||||||||||| |||| ||  ||||||| | ||||||| ||||||||| |||||||||||||||||||    
T  36967310 caaaataattgttactttagaatatcaatgcataatttattatttttttcattattatacccttatttattgaatttcatt 36967390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 1875916 - 1875839
Alignment:
Q  4 aataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcat 79  Q
    |||||||||||||||| ||||||||| |||||||||||  | |||| ||||| |||||| ||||||||| ||||||||    
T  1875916 aataattgtcactttacaataccaatgcaacatttattacttttttccactagtatacccttatttattaaatttcat 1875839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 4924202 - 4924133
Alignment:
Q  44 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    |||||||||| |||||| ||||||||| | ||||||||||||||| ||||  | ||||||||||||||||    
T  4924202 tttttcactaatatacccttatttattaagtttcattcaacttaactactctattaactacaattaataa 4924133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 15675373 - 15675442
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttatt 70  Q
    ||||||| |||||||||||||||||||||||| ||||||| ||||||| || | |||||| |||||||||    
T  15675373 aaaataactgtcactttagaataccaatacaatatttattaatttttctacgaatatacccttatttatt 15675442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 50753 - 50833
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatt-tattttt-cactattataccattatttattgaatttcatt 80  Q
    ||||||||||||||||||||||| |||| || |||||||| | ||||| || ||||||||| ||||||||| |||||||||    
T  50753 aaaataattgtcactttagaatatcaatgcagcatttattatctttttccattattatacctttatttattaaatttcatt 50833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 32678402 - 32678454
Alignment:
Q  62 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    ||||||||| |||||||| |||||||| |||| ||||||||||||||||||||    
T  32678402 ttatttatttaatttcatccaacttaactactccactaactacaattaataag 32678454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 27294176 - 27294125
Alignment:
Q  62 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    |||||||||||||||||| |||||||| |||| |||||||| ||||||||||    
T  27294176 ttatttattgaatttcatccaacttaattactccactaactgcaattaataa 27294125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 43719365 - 43719302
Alignment:
Q  50 actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    ||||||||||| |||||||||||||||||| |||||||| || |  |||||||| |||||||||    
T  43719365 actattatacctttatttattgaatttcatccaacttaattattcaactaactataattaataa 43719302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 6796515 - 6796395
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcact--attataccattatttattgaatttcattcaac----ttaaatac 92  Q
    |||||||||||||||||||  ||| |||| || ||||||||  |||||||  ||  |||||||| ||||||| ||||||| |||||||    |||| |||    
T  6796515 caaaataattgtcactttacgatagcaatgcagcatttattattattttttcctttattatacccttatttaatgaattttattcaacttaattaactac 6796416  T
Q  93 ttcactaactacaattaataa 113  Q
    | |||||||||||||||||||    
T  6796415 tccactaactacaattaataa 6796395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 113
Target Start/End: Complemental strand, 21649487 - 21649427
Alignment:
Q  53 attataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    |||||| |||||||||||||||||||||||| |||| ||||  ||||||||  ||||||||    
T  21649487 attatatcattatttattgaatttcattcaatttaactactcaactaactatgattaataa 21649427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 113
Target Start/End: Original strand, 42886990 - 42887050
Alignment:
Q  53 attataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    |||||||  ||||||||||||||| || |||||||| |||  |||||||||||||||||||    
T  42886990 attatactcttatttattgaattttatccaacttaactacgccactaactacaattaataa 42887050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 113
Target Start/End: Original strand, 31331419 - 31331458
Alignment:
Q  74 tttcattcaacttaaatacttcactaactacaattaataa 113  Q
    |||||| |||||||| ||||||||||||||||||||||||    
T  31331419 tttcatccaacttaattacttcactaactacaattaataa 31331458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 12559558 - 12559615
Alignment:
Q  58 accattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 115  Q
    ||||||||||||| || |||||  ||||| | || |||||||||||||||||||||||    
T  12559558 accattatttatttaaattcatcaaacttgactagttcactaactacaattaataaga 12559615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 113
Target Start/End: Original strand, 5356602 - 5356650
Alignment:
Q  65 tttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    ||||||||||||||| |||||||| || | || ||||||||||||||||    
T  5356602 tttattgaatttcatccaacttaattattccattaactacaattaataa 5356650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 32631351 - 32631467
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||| || ||||| | |||| |||| ||| || ||||  |||||| ||||||| ||  ||||| ||| |||||||  |||||||| |||| |||||    
T  32631351 caaaataaatgccacttaaaaatatcaatgcaatatctattattttttctactattacacacttattcattaaatttcacacaacttaattactccacta 32631450  T
Q  100 actacaattaataagat 116  Q
    || ||||||||||||||    
T  32631451 acaacaattaataagat 32631467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 34057731 - 34057691
Alignment:
Q  66 ttattgaatttcattcaacttaaatacttcactaactacaa 106  Q
    |||||||||||||| |||||||| || ||||||||||||||    
T  34057731 ttattgaatttcatccaacttaactatttcactaactacaa 34057691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 7e-36; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 16821516 - 16821401
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatt--tattttt-cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||||||||||||||||| || ||||||||  ||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  16821516 aaaataattgtcactttagaataccaatgcagcatttattattatttttgcactattatacccttatttattgaatttcattcaacttaaatactccact 16821417  T
Q  99 aactacaattaataag 114  Q
    ||||| ||||||||||    
T  16821416 aactataattaataag 16821401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 34360592 - 34360707
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||||||||||| |||||||||  ||||||| ||| |||||  |||||||||||| ||||||||||||||| ||||||||||| |||| |||||    
T  34360592 aaaataattgtcactttacaataccaatttaacattttttttttttttccactattatacccttatttattgaattttattcaacttaactactccacta 34360691  T
Q  100 actacaattaataaga 115  Q
    ||||||||||||||||    
T  34360692 actacaattaataaga 34360707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 35311410 - 35311292
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tattttt--cactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    ||||||||||||||||||| ||||||||| |||||||||||  |||||||  || ||||||||| |||||||||||||||||| |||||||| |||| ||    
T  35311410 caaaataattgtcactttacaataccaatgcaacatttattattattttttccaatattatacctttatttattgaatttcatccaacttaattactcca 35311311  T
Q  97 ctaactacaattaataaga 115  Q
    |||||||||||||||||||    
T  35311310 ctaactacaattaataaga 35311292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 7061849 - 7061735
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatt--tttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||| |||||| |||| ||||||||||||||||  ||  ||||||||||||||| ||||||||||||||||||||||||||| || | ||||    
T  7061849 caaaataattgttactttaaaatatcaatacaacatttattatttattttcactattatacccttatttattgaatttcattcaacttaattaatccact 7061750  T
Q  99 aactacaattaataa 113  Q
    |||||||||||||||    
T  7061749 aactacaattaataa 7061735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 26147803 - 26147684
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacattta-tttattttt---cactattataccattatttattg-aatttcattcaacttaaatacttc 95  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||   || ||||||||| |||||||||| || ||||| |||||||| |||| |    
T  26147803 caaaataattgtcactttagaataccaatacaacatttattttatttttttccattattatacccttatttattgaaaattcatccaacttaattactcc 26147704  T
Q  96 actaactacaattaataaga 115  Q
    ||||||||||||||||||||    
T  26147703 actaactacaattaataaga 26147684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 42617088 - 42616974
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||||||||| ||| |||||||||||  |||||| || ||||||||  |||||||||||||||||||| |||||| |||| ||||    
T  42617088 caaaataattgtcactttagaatacaaatgcaacatttattattattttccattattatacacttatttattgaatttcattcgacttaactactccact 42616989  T
Q  99 aactacaattaataa 113  Q
     ||||||||||||||    
T  42616988 tactacaattaataa 42616974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 21240885 - 21240774
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||| ||||||||||||||| |||| ||||||||||  ||||| || ||||||||| |||||||||||||||||| |||||||| ||||  |||||    
T  21240885 caaaataaatgtcactttagaatatcaatgcaacatttat--attttccattattatacccttatttattgaatttcatccaacttaactactcaactaa 21240788  T
Q  101 ctacaattaataag 114  Q
    ||||||||||||||    
T  21240787 ctacaattaataag 21240774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 22129978 - 22130094
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    |||||||||||||| |||| ||||||||| |||||||||||  |||||   || ||||||||| |||||||||||||||||| |||||||| |||| |||    
T  22129978 caaaataattgtcattttacaataccaatgcaacatttattattttttttccattattatacctttatttattgaatttcatccaacttaattactccac 22130077  T
Q  98 taactacaattaataag 114  Q
    |||||||||||||||||    
T  22130078 taactacaattaataag 22130094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 38405288 - 38405172
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    |||||||||||||||||||||||| |||| |||||||||||  |||||   || ||||||||| |||||||||||||||||| |||||||| |||  |||    
T  38405288 caaaataattgtcactttagaatagcaatgcaacatttattactttttttccattattatacctttatttattgaatttcatccaacttaactacaccac 38405189  T
Q  98 taactacaattaataag 114  Q
    |||||||||||||||||    
T  38405188 taactacaattaataag 38405172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 49176120 - 49176004
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||||||||||||| ||||| |||||  |||||   |||||||||||| ||||||||||||||| || |||||||| |||| | |    
T  49176120 caaaataattgtcactttagaataccaatgcaacaattattatttttttcccactattatacccttatttattgaattttatccaacttaactactccgc 49176021  T
Q  98 taactacaattaataag 114  Q
    |||||||||||||||||    
T  49176020 taactacaattaataag 49176004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 1814041 - 1814122
Alignment:
Q  130 gcgacaaaagtttcacgaatatcacacgagaaaagctcaaaagcggtgatttccttgttttatctctttttggttataccat 211  Q
    ||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||| |||||||||| |||||||    
T  1814041 gcgacaaaagtttcacgaatatcacacgagaaaagtttaaaaacggtgatttccttgttttatttctttttggtcataccat 1814122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 2066727 - 2066840
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||||||||||||||||||||||||  | ||||||||  ||||||| ||||||||| ||||||||||||||||||  ||||||| |||  ||||||    
T  2066727 caaaataattgtcactttagaataccaatgaagcatttattattttttcattattatacctttatttattgaatttcatctaacttaactaccccactaa 2066826  T
Q  101 ctacaattaataag 114  Q
    ||| ||||||||||    
T  2066827 ctaaaattaataag 2066840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 5841613 - 5841497
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaa-tacttcac 97  Q
    |||||||||||||||||||||||| |||| || ||||||||  || ||| || ||||||||| |||||||||||||||||| ||||||||| |||| |||    
T  5841613 caaaataattgtcactttagaatatcaatgcatcatttattattaatttccattattatacctttatttattgaatttcatccaacttaaactactccac 5841514  T
Q  98 taactacaattaataag 114  Q
    |||||||||||||||||    
T  5841513 taactacaattaataag 5841497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 25233118 - 25233230
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||||||||||||||||| |||| ||||||||||| | ||||||| ||| ||| | |||||||||||| ||||| |||||||| ||||||||||    
T  25233118 caaaataattgtcactttagaatatcaatgcaacatttattatttttttcattataatatctttatttattgaacttcatccaacttaactacttcacta 25233217  T
Q  100 actacaattaata 112  Q
    |||| ||||||||    
T  25233218 actataattaata 25233230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 47773204 - 47773089
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||||||||||||| || ||||||||  |||||  || ||| ||||| |||||||||||| ||||| |||||||| |||| ||||    
T  47773204 caaaataattgtcactttagaataccaatgcagcatttattatttttttccattataatacccttatttattgaacttcatccaacttaactactccact 47773105  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  47773104 aactacaattaataag 47773089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 49428526 - 49428412
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||||||||||| | |||| |||||||||||  |||||  || ||||||||| |||||||||||||||||| |||||||| |||| ||||    
T  49428526 caaaataattgtcactttagaa-atcaatgcaacatttattacttttttccattattatacccttatttattgaatttcatccaacttaattactccact 49428428  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  49428427 aactacaattaataag 49428412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 49746896 - 49747009
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttc-actattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||| ||||||||| |||||||||||  |||||||| | ||||||||| |||||||||||||||||| |||||||| ||||  ||    
T  49746896 caaaataattgtcactttacaataccaatgcaacatttattattatttttccattattatacccttatttattgaatttcatccaacttaactactcaac 49746995  T
Q  98 taactacaattaat 111  Q
    |||||| |||||||    
T  49746996 taactataattaat 49747009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 6643844 - 6643731
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||||||||| |||  |||  || |||||||||||||||| ||||||||||| |||||||||||||||||| |||||||| ||   |||||    
T  6643844 caaaataattgtcactttacaatttcaacgcagcatttatttatttttccactattatacccttatttattgaatttcatccaacttaactataccacta 6643745  T
Q  100 actacaattaataa 113  Q
    ||||||||||||||    
T  6643744 actacaattaataa 6643731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 35380519 - 35380404
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||| ||||||||| |||||||||||  |||||   || ||||||||  |||||||||||||||||| ||||||||  ||| |||    
T  35380519 caaaataattgtcactttataataccaatgcaacatttattattttttttccattattatactcttatttattgaatttcatccaacttaaccactccac 35380420  T
Q  98 taactacaattaataa 113  Q
    ||||||||||||||||    
T  35380419 taactacaattaataa 35380404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 50264226 - 50264149
Alignment:
Q  38 tatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 115  Q
    ||||| |||| || ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  50264226 tattttttttccattattatacccttatttattgaatttcattcaacttaaatatttcactaactacaattaataaga 50264149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 33790918 - 33790801
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt----cactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    ||||||||||||||||||||||| ||||  || ||||||||| ||||     || ||||||||| |||||||||||||||||| |||||||| |||| ||    
T  33790918 caaaataattgtcactttagaattccaacgcagcatttattttttttctttccattattatacccttatttattgaatttcatccaacttaactactcca 33790819  T
Q  97 ctaactacaattaataag 114  Q
    ||||||||||||||||||    
T  33790818 ctaactacaattaataag 33790801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 52859979 - 52859869
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcac--tattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||||||||||||| |||||||||||  |||||| |  ||||||||| |     ||||||||||||||||||||| |||| ||||    
T  52859979 caaaataattgtcactttagaataccaatgcaacatttattattttttcccattattataccct-----attgaatttcattcaacttaactactccact 52859885  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  52859884 aactacaattaataag 52859869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 51624722 - 51624836
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||| |||| ||||  ||||||||||  |||||  |||||| ||||| |||||||||||||||||| |||||||| |||| ||||    
T  51624722 caaaataattgtcactttacaatatcaatgtaacatttattatttttttccactatcatacccttatttattgaatttcatccaacttaactactccact 51624821  T
Q  99 aactacaattaataa 113  Q
    |||||||| ||||||    
T  51624822 aactacaaataataa 51624836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 11907784 - 11907669
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||||||||||||| || ||||||||  |||||  || ||| ||||  |||||||||||| ||||| |||||||| |||| || |    
T  11907784 caaaataattgtcactttagaataccaatgcagcatttattatttttttccattataatacatttatttattgaacttcatccaacttaactactccaat 11907685  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  11907684 aactacaattaataag 11907669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 53412044 - 53412158
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacat---ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||| ||||||||||||||  |||||   |||||| ||||||||||||||||  |||||||||||||||||| |||||||| || | |||     
T  53412044 aaaataattgtcattttagaataccaatgtaacatctattatttttttttcactattatacttttatttattgaatttcatccaacttaactattccaca 53412143  T
Q  99 aactacaattaataa 113  Q
    ||||| |||||||||    
T  53412144 aactataattaataa 53412158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 52247611 - 52247498
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||||||||||| || ||||||| ||||||||||  | |||| ||  |||||||  ||||||| ||||||||||||||||||| |||| |||||    
T  52247611 aaaataattgtcactttacaa-accaatagaacatttattattcttttccatcattatacacttatttaatgaatttcattcaacttaactactccacta 52247513  T
Q  100 actacaattaataag 114  Q
    |||||||||||||||    
T  52247512 actacaattaataag 52247498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 17237436 - 17237366
Alignment:
Q  44 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    |||| |||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||||||    
T  17237436 ttttccactattatacccttatttattgaatttcatccaacttaactactccactaactacaattaataag 17237366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 47464512 - 47464434
Alignment:
Q  37 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 115  Q
    |||||| |||| |||||||||||| |||||||||||||||||| |||||||| |||| ||| |||||||||||||||||    
T  47464512 ttattttttttccactattatacccttatttattgaatttcatccaacttaactactccaccaactacaattaataaga 47464434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 43237224 - 43237293
Alignment:
Q  44 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    ||||||||||||||||  |||||||||||||||||| |||||||| |||||||||||||| |||||||||    
T  43237224 tttttcactattatacacttatttattgaatttcatccaacttaactacttcactaactataattaataa 43237293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 35251837 - 35251936
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||| ||| ||||||||||||| ||||||||||||  ||||||||| ||||||| | ||||||||||||||||||  ||||||| |||| ||||||    
T  35251837 aaataattatcaatttagaataccaaaacaacatttattattatttttcattattatatccttatttattgaatttcatctaacttaattactccactaa 35251936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 2653357 - 2653472
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatt-tatttttc-actattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||| |||||||||||||||| |||| ||||||||||| | |||||| | ||||||||| ||||||||| |||||||| ||| |||| |||| |  ||    
T  2653357 aaaatagttgtcactttagaatatcaatgcaacatttattatctttttccattattatacctttatttattaaatttcatccaatttaactactccttta 2653456  T
Q  100 actacaattaataaga 115  Q
    ||||||||||||||||    
T  2653457 actacaattaataaga 2653472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 10754310 - 10754423
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc--actattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||| | || ||||||||| ||||| ||||| |||||||  || |||||||  ||||||||| ||||||||||||||||| || | ||||    
T  10754310 caaaataattgtcaatctaaaataccaatgcaacaattatt-atttttccaaccattatactcttatttattaaatttcattcaacttaattattccact 10754408  T
Q  99 aactacaattaataa 113  Q
    |||||||||||||||    
T  10754409 aactacaattaataa 10754423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 10968079 - 10968192
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc--actattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||| | || ||||||||| ||||| ||||| |||||||  || |||||||  ||||||||| ||||||||||||||||| || | ||||    
T  10968079 caaaataattgtcaatctaaaataccaatgcaacaattatt-atttttccaaccattatactcttatttattaaatttcattcaacttaattattccact 10968177  T
Q  99 aactacaattaataa 113  Q
    |||||||||||||||    
T  10968178 aactacaattaataa 10968192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 5618484 - 5618570
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttattta-tttttcactattataccattatttattgaatttcattcaactt 86  Q
    ||||||||||||||||||| |||| |||| || |||||||||| ||||||| ||||||| | || ||||||||||||||||||||||    
T  5618484 caaaataattgtcactttaaaatatcaatgcagcatttatttattttttcattattataactttttttattgaatttcattcaactt 5618570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 19265744 - 19265859
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttatttatttttcac----tattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||||||| ||| ||||||||| |  |||||  |    ||||| ||| ||| ||||||||||||||||||||||| |||| ||||    
T  19265744 aaataattgtcactttagaatactaatgcaacatttagtatttttttccattatattacacccttaattattgaatttcattcaacttaactactccact 19265843  T
Q  99 aactacaattaataag 114  Q
    ||||| ||||||||||    
T  19265844 aactataattaataag 19265859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 28501070 - 28500979
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt----cactattataccattatttattgaatttcattcaacttaa 88  Q
    ||||||||||||| |||||||||||||||||||||||||||  |||||    || ||||||||| ||||||||||||||||||  |||||||    
T  28501070 caaaataattgtctctttagaataccaatacaacatttattattttttttcccattattatacccttatttattgaatttcatcaaacttaa 28500979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 43902188 - 43902303
Alignment:
Q  2 aaaataattgtcactttagaatacca---atacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||||||| |||| ||   ||  ||||||| |||||||| ||||||||| || |||||||||||||||||| |||||||| |||| ||||    
T  43902188 aaaataattgtcactttacaatatcatcaatgtaacatttttttatttt-cactattatgcccttatttattgaatttcatgcaacttaattactccact 43902286  T
Q  99 aactacaattaataaga 115  Q
    |||||  ||||||||||    
T  43902287 aactatgattaataaga 43902303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 115
Target Start/End: Original strand, 32884777 - 32884853
Alignment:
Q  39 atttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 115  Q
    |||| |||| |||||||||| | |||||||||||||| ||| |||||||| |||| |||||||||||||||||||||    
T  32884777 attttttttccactattatatccttatttattgaattccatccaacttaactactccactaactacaattaataaga 32884853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 4972509 - 4972588
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcat 79  Q
    |||||||| |||||||||| |||||||||  |||||||||| | ||||||||||||||||  ||||||||||||||||||    
T  4972509 caaaataactgtcactttacaataccaatgtaacatttattatttttttcactattatacacttatttattgaatttcat 4972588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 44536381 - 44536266
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttattta----tttttcactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    |||||||||||||||||| ||||| ||| || |||||||||     |||| |||||||||||| |||||| |||||||||||  ||||||  |||| |||    
T  44536381 aaaataattgtcactttacaatactaatgcagcatttattttattcttttccactattatacccttattt-ttgaatttcatctaacttagctactccac 44536283  T
Q  98 taactacaattaataag 114  Q
    |||||||||||||||||    
T  44536282 taactacaattaataag 44536266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 36985722 - 36985835
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||| ||||||||| ||||  | |||||| |  |||||  ||| |||||||| |||||||||||||||||| |||||||| || |  |||    
T  36985722 caaaataattgtcagtttagaatatcaatgaagcatttactgtttttttccaccattatacccttatttattgaatttcatccaacttaattattctact 36985821  T
Q  99 aactacaattaata 112  Q
    ||||||||||||||    
T  36985822 aactacaattaata 36985835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 31370474 - 31370373
Alignment:
Q  11 gtcactttagaataccaatacaacatttatttattttt-cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaatta 109  Q
    |||| |||| |||| ||||||||||||||||  ||||| || ||||||||  ||||||||||| |||||| |||||||| |||| ||||||||| |||||    
T  31370474 gtcattttaaaataacaatacaacatttattattttttgcattattatacatttatttattgattttcatccaacttaactactccactaactataatta 31370375  T
Q  110 at 111  Q
    ||    
T  31370374 at 31370373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 113
Target Start/End: Original strand, 35998750 - 35998861
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||||||| |||| |||| ||||| | ||||||||  | ||||||||||||||| | |||||||||||| ||||| |||||||| |||| ||  ||    
T  35998750 aaataattgtcaatttacaatatcaatatagcatttattattctttttcactattatatctttatttattgaa-ttcatccaacttaactactccatcaa 35998848  T
Q  101 ctacaattaataa 113  Q
    |||||||||||||    
T  35998849 ctacaattaataa 35998861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 40123039 - 40122924
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||| |||||||| ||||||||| |||||||||||  |||||   ||| ||| |||| |||||||||||||||| |  ||||||| | || ||||    
T  40123039 aaaataattatcactttacaataccaatgcaacatttattatttttttcccaccattgtacccttatttattgaatttcgtcgaacttaactgctccact 40122940  T
Q  99 aactacaattaataag 114  Q
    ||||||||| ||||||    
T  40122939 aactacaatcaataag 40122924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 47359089 - 47359020
Alignment:
Q  44 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    |||| |||||||  ||| ||||||||||||||||||||||||||| |||| |||| ||||||||||||||    
T  47359089 ttttccactattgcacccttatttattgaatttcattcaacttaattactccactgactacaattaataa 47359020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 2942831 - 2942714
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatt--tattttt---cactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    ||||||||||||| |||| |||| ||||  || |||||||  |||||||   |||||||||| | || ||||||||| ||||||||||||||  ||| ||    
T  2942831 aaaataattgtcattttacaatatcaatgaaatatttattattatttttttccactattatatctttgtttattgaaattcattcaacttaaccactcca 2942732  T
Q  97 ctaactacaattaataag 114  Q
    ||||||||||||||||||    
T  2942731 ctaactacaattaataag 2942714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 25142566 - 25142449
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc----actattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    |||| ||||||||||||||||||| |||| || ||||| |||||||||     | | ||||| | |||||||||||||||||| |||||||| ||| |||    
T  25142566 caaactaattgtcactttagaatatcaattcagcatttttttattttttttttattgttatatccttatttattgaatttcatccaacttaactacatca 25142467  T
Q  97 ctaactacaattaataag 114  Q
    |||||| |||| ||||||    
T  25142466 ctaactgcaatcaataag 25142449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 48914278 - 48914218
Alignment:
Q  54 ttataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    ||||||| | ||||||||||||||||| ||||||| ||||||||||||||||| |||||||    
T  48914278 ttataccctaatttattgaatttcattaaacttaattacttcactaactacaaataataag 48914218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 49579361 - 49579249
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||||||||||||||| |||| |||| ||| |||| | | ||||| |||| || |   |||||||||||||||||| ||||||||  | |||| |||    
T  49579361 caaaataattgtcactttaaaatatcaatgcaatatttttattttttttactagtacattcttatttattgaatttcatccaacttaacaatttcaataa 49579262  T
Q  101 ctacaattaataa 113  Q
    |||||||||||||    
T  49579261 ctacaattaataa 49579249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 19627194 - 19627115
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcat 79  Q
    ||||||||||||||| ||| || | |||||||||||| ||| | ||||||||||||||| | ||||||||||||||||||    
T  19627194 caaaataattgtcacattacaaaatcaatacaacattaattatttttttcactattatatctttatttattgaatttcat 19627115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 30682380 - 30682266
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttatt--tattttt-cactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||||||||||||| | ||||  | ||||||||  ||||||| || |||||| |  |||||||||||||||||||||| |||| ||||  ||||    
T  30682380 aaataattgtcactttagaaaatcaatgtagcatttattattattttttcattattatgcttttatttattgaatttcattcaaattaactactctacta 30682281  T
Q  100 actacaattaataag 114  Q
    ||||||| |||||||    
T  30682280 actacaactaataag 30682266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 54506725 - 54506838
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||| || ||||| |||| | || |||||||||||  ||||||||| |||||||   ||||| ||||||||||||  ||||||| |||| |||||    
T  54506725 aaaataattatcgctttataatatcgatgcaacatttattattatttttcattattatattcttattaattgaatttcatcaaacttaactactccacta 54506824  T
Q  100 actacaattaataa 113  Q
    ||||||||| ||||    
T  54506825 actacaattgataa 54506838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 6609694 - 6609811
Alignment:
Q  2 aaaataattgtcactttagaataccaata---caacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttc 95  Q
    |||||||||||||||||||||||| | ||   |||||||||||  |||||   || ||||||||  ||||||||||| |||||| |||||||| |||| |    
T  6609694 aaaataattgtcactttagaatactactaatgcaacatttattattttttttccattattatactcttatttattgagtttcatccaacttaactactcc 6609793  T
Q  96 actaactacaattaataa 113  Q
    | ||| ||||||||||||    
T  6609794 aataattacaattaataa 6609811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 46397055 - 46396967
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaa 88  Q
    ||||||||||||||||||  |||| |||||||||||||||  | |||| || ||||||||| ||||||| ||||||| || ||||||||    
T  46397055 aaaataattgtcactttacgatacgaatacaacatttattagttttttccattattatacccttatttaatgaattttatccaacttaa 46396967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 54202133 - 54202246
Alignment:
Q  2 aaaataattgtcactttagaatacc-aatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||  ||||||||||  || ||||||||||||  |||||| ||| |||||   |||||||||||||||||| | ||| || ||||||||||    
T  54202133 aaaataattgtccatttagaatacataacacaacatttattattttttctactgttatattcttatttattgaatttcatcccactcaattacttcacta 54202232  T
Q  100 actacaattaataa 113  Q
    | ||||||||||||    
T  54202233 attacaattaataa 54202246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 53346702 - 53346810
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||||||||||||||| ||||    |||||||||| |||  || | ||||||||||   |||||||||||||||||  ||||||| |||| ||||||    
T  53346702 caaaataattgtcactttacaata----tacaacattttttttcttct-actattatactcatatttattgaatttcatcaaacttaactactccactaa 53346796  T
Q  101 ctacaattaataag 114  Q
    ||| ||||||||||    
T  53346797 ctaaaattaataag 53346810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 4739549 - 4739435
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||  || |||||| | || |||||||||||  |||||||||||| |||||| ||||| ||| ||||  | || |||||| |||| |||||    
T  4739549 aaaataattgtcttttcagaatatcgatgcaacatttattattatttttcactaatatacccttattaatttaattataatccacttaattactccacta 4739450  T
Q  100 actacaattaataag 114  Q
    |||||||||| ||||    
T  4739449 actacaattattaag 4739435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 17114377 - 17114491
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||| ||||||||||  || || | ||||||  |||||  || ||| ||||| |||||||||||| ||| | ||| |||| |||| |||||    
T  17114377 aaaataattgtcattttagaatacttatgcagcgtttattatttttttccattataatacctttatttattgaacttcctccaaattaactactccacta 17114476  T
Q  100 actacaattaataag 114  Q
    |||||||||||||||    
T  17114477 actacaattaataag 17114491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 113
Target Start/End: Complemental strand, 18741596 - 18741545
Alignment:
Q  62 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    |||||||||||||||||| |||||||| |||| || ||||||||||||||||    
T  18741596 ttatttattgaatttcatccaacttaactactccattaactacaattaataa 18741545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 28911340 - 28911221
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttat--ttatttttcactattataccattatttattgaatttcattcaacttaa----atacttc 95  Q
    ||||||||||||  ||||||||| |||| ||||||||||  || |||| || ||||||||  ||||||||||||||||||  |||||||    ||  ||     
T  28911340 aaaataattgtcgatttagaatatcaatgcaacatttattatttttttccattattatactcttatttattgaatttcatcaaacttaactatattgttt 28911241  T
Q  96 actaactacaattaataaga 115  Q
    ||||||||||||||||||||    
T  28911240 actaactacaattaataaga 28911221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 54921877 - 54921803
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttat--ttatttttcactattataccattatttattgaat 74  Q
    |||||||||||||||||| |||||||||  | |||||||  || ||| ||||||||||||| |||||||||||||    
T  54921877 aaaataattgtcactttacaataccaatttagcatttattattttttctcactattatacccttatttattgaat 54921803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 461947 - 462009
Alignment:
Q  52 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    ||||||||| |||||| |||||||| ||||||||||| |||| | |||| |||||||||||||    
T  461947 tattatacccttatttgttgaattttattcaacttaactactccgctaattacaattaataag 462009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 116
Target Start/End: Complemental strand, 11288751 - 11288697
Alignment:
Q  62 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataagat 116  Q
    ||||||||||||||| || |||||||| |||| ||| ||||||||||||||||||    
T  11288751 ttatttattgaattttatccaacttaactactccaccaactacaattaataagat 11288697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 30260972 - 30261058
Alignment:
Q  31 caacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataagatg 117  Q
    |||||||||| | |||||| ||| ||||   ||||||||||||||||| || |||||| ||||  ||||| ||||||||||||||||    
T  30260972 caacatttatctttttttctctaatatagtcttatttattgaatttcactctacttaactactctactaattacaattaataagatg 30261058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 17121195 - 17121259
Alignment:
Q  16 tttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttca 78  Q
    |||| ||||||||| |||||||||||  ||||||||||||  |||||||||||||||| ||||||    
T  17121195 tttacaataccaatgcaacatttattattatttttcactaacataccattatttattgcatttca 17121259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 18532157 - 18532229
Alignment:
Q  41 ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    |||||||||||||||||| ||| |||||||||||||||| | | ||||  ||| |||| |||| |||||||||    
T  18532157 ttatttttcactattatatcataatttattgaatttcatcctagttaaccactccacttactataattaataa 18532229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 20612300 - 20612242
Alignment:
Q  55 tataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    ||||| |||||||||||||||||| |  |||||| ||||||| || |||||||||||||    
T  20612300 tatactattatttattgaatttcaattcacttaactacttcattatctacaattaataa 20612242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 20681406 - 20681452
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttattttt 48  Q
    |||||||||||||||||| |||| |||||||| ||||||| ||||||    
T  20681406 aaaataattgtcactttaaaatatcaatacaatatttattaattttt 20681452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 10672643 - 10672704
Alignment:
Q  53 attataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    |||||||  |||||||||||||||||| |||||||| || |||| | |||| ||||||||||    
T  10672643 attatactcttatttattgaatttcatccaacttaactatttcattgactaaaattaataag 10672704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 10886283 - 10886344
Alignment:
Q  53 attataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    |||||||  |||||||||||||||||| |||||||| || |||| | |||| ||||||||||    
T  10886283 attatactcttatttattgaatttcatccaacttaactatttcattgactaaaattaataag 10886344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 52868909 - 52868990
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttca-ctattataccattatttattgaatttcatt 80  Q
    |||||||||||||| |||| ||||| ||| ||||||||||| | |||||||  | ||||||| |||||| ||||||||||||    
T  52868909 caaaataattgtcattttataatactaattcaacatttattgtttttttcatttgttatacccttatttgttgaatttcatt 52868990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 3689502 - 3689614
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||| ||||||||||||| |||||    | |||||||||||  |||||| || ||||||||| ||||| ||| ||||||||  |||||||  |||  |||    
T  3689502 caaagtaattgtcactttggaata----tgcaacatttattattattttccattattatacccttattaatttaatttcatctaacttaacaactcaact 3689597  T
Q  99 aactacaattaataaga 115  Q
    ||||| |||||||||||    
T  3689598 aactataattaataaga 3689614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 44526378 - 44526430
Alignment:
Q  62 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    ||||||||| |||||||| |||||| | || | ||||||||||||||||||||    
T  44526378 ttatttattaaatttcatccaacttcactattccactaactacaattaataag 44526430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 130 - 219
Target Start/End: Complemental strand, 143199 - 143110
Alignment:
Q  130 gcgacaaaagtttcacgaatatcacacgagaaaagctcaaaagcggtgatttccttgttttatctctttttggttataccatttatctct 219  Q
    |||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  143199 gcgacaaaagtttcacgaatatcatatgagaaaagttcaaaagcggtgatttccttgttttatctctttttggtcataccatttatctct 143110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 34197 - 34083
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||||||||| |||| |||| || ||||||||  |||||| |||||||||||||||||||||||||||||| |||||||| || |||||||    
T  34197 caaaataattgtcactttacaatatcaatgcatcatttattattttttccactattataccattatttattgaatttcatccaacttaactatttcacta 34098  T
Q  100 actacaattaataag 114  Q
    |||||||||||||||    
T  34097 actacaattaataag 34083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 12039018 - 12039134
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||| ||||| ||| |||||||||||  |||||| |||||||||||| |||||||||||||| ||| ||||||||||||| || |    
T  12039018 caaaataattgtcactttacaatactaatgcaacatttattattattttccactattatacccttatttattgaattacatccaacttaaatactccatt 12039117  T
Q  99 aactacaattaataaga 115  Q
    |||||||||||||||||    
T  12039118 aactacaattaataaga 12039134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 39864047 - 39864163
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||| |||| |||| |||||||||||  |||||  |||||||||||| |||||||||||||||||| |||||||| |||| ||||    
T  39864047 caaaataattgtcactttacaatatcaatgcaacatttattatttttttccactattatacccttatttattgaatttcatccaacttaactactccact 39864146  T
Q  99 aactacaattaataaga 115  Q
    |||||||||||||||||    
T  39864147 aactacaattaataaga 39864163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 31042733 - 31042848
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||||||||||||| ||||||| ||||||||  |||||  |||||| ||| | ||||||||||||||||||||||||||| |||||||||    
T  31042733 caaaataattgtcactttagaatatcaatacatcatttattatttttttccactatgatatctttatttattgaatttcattcaacttaattacttcact 31042832  T
Q  99 aactacaattaataag 114  Q
    | ||||||||||||||    
T  31042833 acctacaattaataag 31042848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 35367738 - 35367853
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||| |||||||||  ||||||||||  | ||||||||||||||||| ||||||||||||||||||  ||||||| |||| ||||    
T  35367738 caaaataattgtcactttacaataccaatgaaacatttattagtctttttcactattatacccttatttattgaatttcatctaacttaactactccact 35367837  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  35367838 aactacaattaataag 35367853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 37506060 - 37506174
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||||||||||||| |||| |||||||||||  |||||  || ||| ||||| ||||||||||||||||||||||||||| |||| ||||    
T  37506060 caaaataattgtcactttagaatatcaatgcaacatttattatttttttccattataatacccttatttattgaatttcattcaacttaactactccact 37506159  T
Q  99 aactacaattaataa 113  Q
    |||||||||||||||    
T  37506160 aactacaattaataa 37506174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 49224168 - 49224053
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||||||||| ||| |||||||||||  | ||||||| ||| ||||| |||||||||||| ||||| |||||||| |||| ||||    
T  49224168 caaaataattgtcactttagaatactaatgcaacatttattattttttttcattataatacccttatttattgaacttcatccaacttaactactccact 49224069  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  49224068 aactacaattaataag 49224053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 4659713 - 4659816
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||||||  |||||||||| | ||||||||||||||||||||||||||| |||| ||||    
T  4659713 caaaataattgtcactttacaataccaatgcaacatt-atttattttttccactattatatccttatttattgaatttcattcaacttaattactccact 4659811  T
Q  99 aacta 103  Q
    |||||    
T  4659812 aacta 4659816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 6785192 - 6785304
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||| |||||| || |||||||||||  |||||  |||||||||||| ||||||||||||||||||  ||||||| |||| ||||    
T  6785192 caaaataattgtcactttacaatacctatgcaacatttattatttttttccactattatacccttatttattgaatttcatcaaacttaactactccact 6785291  T
Q  99 aactacaattaat 111  Q
    |||||||||||||    
T  6785292 aactacaattaat 6785304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 24991836 - 24991721
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||| ||||| ||| |||||||||||  |||||   |||||||||||| |||||||||||||||||| |||||||| || | |||    
T  24991836 caaaataattgtcactttacaatactaatgcaacatttattatttttttcccactattatacctttatttattgaatttcatccaacttaactattccac 24991737  T
Q  98 taactacaattaataa 113  Q
    ||||||||||||||||    
T  24991736 taactacaattaataa 24991721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 20210022 - 20209907
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcac--tattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||||||||||||| || ||||||||  |||||| |  ||| ||||| |||||||||||| ||||| |||||||| |||| ||||    
T  20210022 caaaataattgtcactttagaataccaatgcagcatttattattttttcccattataatacccttatttattgaacttcatccaacttaactactccact 20209923  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  20209922 aactacaattaataag 20209907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 52429279 - 52429395
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttattttt----cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    |||||||||||||||||| |||| |||| |||||||||||  |||||    || ||||||||| ||||||| ||||||||||||||||||| |||| |||    
T  52429279 aaaataattgtcactttacaatatcaatgcaacatttattattttttttctcattattatacccttatttaatgaatttcattcaacttaactactccac 52429378  T
Q  98 taactacaattaataag 114  Q
    |||||||||||||||||    
T  52429379 taactacaattaataag 52429395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 16395227 - 16395117
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||||||||||||||||||||||  |  ||||||| | ||||||| ||||||| ||||||||||||||||||||  ||||||| |||| |||||    
T  16395227 caaaataattgtcactttagaataccaatgtaggatttattatttttttcattattatatcattatttattgaatttcatctaacttaactactccacta 16395128  T
Q  100 actacaattaa 110  Q
    |||||||||||    
T  16395127 actacaattaa 16395117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 7759151 - 7759267
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||| ||||  ||| || ||||||||  |||||  || ||||||||| ||||||||||||||||||||||||||| || | ||||    
T  7759151 caaaataattgtcactttacaataataatgcatcatttattatttttttccattattatacccttatttattgaatttcattcaacttaactattccact 7759250  T
Q  99 aactacaattaataaga 115  Q
    |||||||||||||||||    
T  7759251 aactacaattaataaga 7759267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 112
Target Start/End: Complemental strand, 13579801 - 13579690
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||||||||||| |||||| || ||| |||||||  ||||||| | ||||||||| ||||||||||||||||||  |||||||||||| |||||    
T  13579801 aaaataattgtcactttaaaataccgatgcaatatttattattattttt-attattatacccttatttattgaatttcatcaaacttaaatactccacta 13579703  T
Q  100 actacaattaata 112  Q
    |||||||||||||    
T  13579702 actacaattaata 13579690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 40145029 - 40144914
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcac--tattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||||||||||||| |||| |||||||||||  |||||| |  ||| ||||| |||||||||||| ||||| |||||||| |||| || |    
T  40145029 caaaataattgtcactttagaatatcaatgcaacatttattattttttcccattataatacccttatttattgaacttcatccaacttaactactccatt 40144930  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  40144929 aactacaattaataag 40144914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 26093330 - 26093445
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttc-actattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||| |||||||||||||| |||| |||  |||||||||| |||||||| | ||||||||| |||||||||||| |||||  ||||||| |||||||||    
T  26093330 caaaacaattgtcactttagtatactaatgtaacatttattatatttttccattattatacccttatttattgaacttcatctaacttaattacttcact 26093429  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  26093430 aactacaattaataag 26093445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 23169173 - 23169060
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||||||||||||||| ||||||||| |||||||||||  |||| |||||||||||  |||||||||||||||||    |||||| || || |||||    
T  23169173 caaaataattgtcactttacaataccaatgcaacatttattacttttccactattatactcttatttattgaatttcacctcacttaactatttaactaa 23169074  T
Q  101 ctacaattaataag 114  Q
    ||| ||||||||||    
T  23169073 ctataattaataag 23169060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 2572405 - 2572519
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||| ||||| ||||||| |||| |||| ||| ||||||||||||||   || |||||||   ||||||||||||||||||||||||||| |||| ||||    
T  2572405 aaaacaattgccactttaaaatatcaatgcaatatttatttatttttttccattattatatttttatttattgaatttcattcaacttaactactccact 2572504  T
Q  99 aactacaattaataa 113  Q
    |||||||||||||||    
T  2572505 aactacaattaataa 2572519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 30755123 - 30755009
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttatttt---tcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||| |||||||||||||||||| || ||| ||||| ||||   ||| ||||||||| ||||||||||||||||||  ||||||| || ||||||    
T  30755123 aaaataattatcactttagaataccaatgcatcatgtattttttttctttcattattatacctttatttattgaatttcatctaacttaactatttcact 30755024  T
Q  99 aactacaattaataa 113  Q
    ||||| |||||||||    
T  30755023 aactataattaataa 30755009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 33733444 - 33733330
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||||||||||||||||||  | ||||||||  | |||| || ||||||||| |||||||||||||||||||| || |||  |||  |||    
T  33733444 caaaataattgtcactttagaataccaatgaagcatttattattcttttccattattatacccttatttattgaatttcattctacctaaccactctact 33733345  T
Q  99 aactacaattaataa 113  Q
    |||||||||||||||    
T  33733344 aactacaattaataa 33733330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 38787274 - 38787392
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt-----cactattataccattatttattgaatttcattcaacttaaatacttc 95  Q
    |||||||||||||||||||||| | |||| ||| |||||||| |||||     || ||||||||| |||||||||||||||||| ||| |||| |||| |    
T  38787274 caaaataattgtcactttagaaaagcaatgcaaaatttattttttttttttcccattattatacccttatttattgaatttcatccaatttaactactcc 38787373  T
Q  96 actaactacaattaataag 114  Q
    |||||||| ||||||||||    
T  38787374 actaactataattaataag 38787392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 9379169 - 9379282
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttattttt-cactattataccattatttattgaatttcattcaacttaaatact-tcacta 99  Q
    ||||||||||||| ||||||||| |||| ||| |||||||||||||| || |||||||||  |||||||| ||||||||  ||||||| ||||  |||||    
T  9379169 aaaataattgtcattttagaatatcaatgcaatatttatttatttttccattattatacctatatttattaaatttcatcaaacttaactactcccacta 9379268  T
Q  100 actacaattaataa 113  Q
    ||||||||||||||    
T  9379269 actacaattaataa 9379282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 14757775 - 14757660
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttat--ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||| ||||| ||||| ||| ||  ||||||  || |||| |||||||||||| ||||||||| ||||||||  ||||||| |||||||||    
T  14757775 caaaataattgtc-ctttacaatacaaatgcagaatttataatttttttccactattatacccttatttattaaatttcatcgaacttaactacttcact 14757677  T
Q  99 aactacaattaataaga 115  Q
    |||||||||||||||||    
T  14757676 aactacaattaataaga 14757660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 44707892 - 44707828
Alignment:
Q  49 cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    |||||||||||| |||||||||||||||||| |||||||| | ||||||||||||||||||||||    
T  44707892 cactattatacctttatttattgaatttcatccaacttaactgcttcactaactacaattaataa 44707828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 22856417 - 22856307
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||||  |||||| |||| |||| |||||||||||  |||||  |||||||||||  |||||||||||||||||| || ||||| |||| ||||||    
T  22856417 aaataattgcaactttaaaatatcaattcaacatttattatttttttgcactattatacttttatttattgaatttcatccagcttaactactccactaa 22856318  T
Q  101 ctacaattaat 111  Q
    |||||||||||    
T  22856317 ctacaattaat 22856307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 25089233 - 25089154
Alignment:
Q  34 catttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    ||||| ||| |||| || || |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  25089233 cattttttttttttccattagtatacccttatttattgaatttcatccaacttaactacttcactaactacaattaataa 25089154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 52837219 - 52837332
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||||||| ||||||| |||| |||| |||||| | ||| ||| ||| ||||||||| ||| |||||||||||||||||  |||| |||| |||||     
T  52837219 caaaataattgccactttataatagcaatgcaacatattttt-tttctcattattatacctttaattattgaatttcattcatattaactactccactag 52837317  T
Q  101 ctacaattaataaga 115  Q
    |||||||||||||||    
T  52837318 ctacaattaataaga 52837332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 916967 - 917075
Alignment:
Q  5 ataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactac 104  Q
    |||||||| ||||||||||| |||| || ||||||||| |||| || |||| |||| ||||||||| |||||||| |||||||| || |  |||||||||    
T  916967 ataattgttactttagaatatcaatgcagcatttattt-ttttccattattttacccttatttattaaatttcatgcaacttaactaatctactaactac 917065  T
Q  105 aattaataag 114  Q
    ||||||||||    
T  917066 aattaataag 917075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 3260529 - 3260642
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||||| |||||||||||||| ||||||| |||||||  || ||| |||||||||   ||||||||| ||||||||  ||||||| | || ||||||    
T  3260529 aaaataattatcactttagaatactaatacaatatttattatttgttctactattataaacttatttattcaatttcatcaaacttaacttctccactaa 3260628  T
Q  101 ctacaattaataag 114  Q
    ||||||||||||||    
T  3260629 ctacaattaataag 3260642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 9307613 - 9307674
Alignment:
Q  49 cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaa 110  Q
    |||||||||||| |||||||||||||||||| |||||||| |||| ||||||||||||||||    
T  9307613 cactattatacctttatttattgaatttcatccaacttaactactccactaactacaattaa 9307674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 35682975 - 35682882
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatact 93  Q
    ||||||||||| || ||||||||| |||| ||| |||||||  |||||| ||||||||||| |||||||||||||||||| |||||||| ||||    
T  35682975 caaaataattgccaatttagaatatcaatgcaatatttattattttttccactattatacccttatttattgaatttcatccaacttaactact 35682882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 44761709 - 44761599
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||||||||||||||||||||  ||  ||||||| |||| || || | ||||||||| |||||||||||||||||||||||||||  | | ||||||    
T  44761709 caaaataattgtcactttagaatattaacgcaacatt-attttttatt-attattatacccttatttattgaatttcattcaacttaaccattccactaa 44761612  T
Q  101 ctacaattaataa 113  Q
    ||| |||||||||    
T  44761611 ctataattaataa 44761599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 37177772 - 37177886
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||| ||||||||  ||||  |||| |||||  ||||||||||||||||||  ||||||||| ||||| || |||||||| ||||  |||    
T  37177772 caaaataattgtcattttagaatgtcaatgtaacacttattattatttttcactattatactcttatttatttaattttatccaacttaactactatact 37177871  T
Q  99 aactacaattaataa 113  Q
    |||||| ||||||||    
T  37177872 aactaccattaataa 37177886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 32826171 - 32826059
Alignment:
Q  5 ataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaata---cttcactaa 100  Q
    ||||||||||||||  ||||||||||||||||||||| | |||| || ||| ||||| |||||||||||| ||||| |||||||| ||   || ||||||    
T  32826171 ataattgtcactttgaaataccaatacaacatttattattttttccattataatacccttatttattgaacttcatccaacttaactactcctccactaa 32826072  T
Q  101 ctacaattaataa 113  Q
     ||||||||||||    
T  32826071 ttacaattaataa 32826059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 37276442 - 37276512
Alignment:
Q  44 tttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    ||||||| ||||||||| |||||||||||||||||| ||| |||| || | ||||||||||||||||||||    
T  37276442 tttttcattattatacccttatttattgaatttcatccaatttaactattccactaactacaattaataag 37276512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 7351575 - 7351687
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||||||||| |||||||||| ||| |||| |||||   ||||||| ||||||||  |||||||||||||||  | |||||||| || | ||||||    
T  7351575 caaaataattgtcattttagaatactaatgcaac-tttatcattttttcattattatactcttatttattgaattttgtccaacttaattattccactaa 7351673  T
Q  101 ctacaattaataag 114  Q
    ||| ||||||||||    
T  7351674 ctagaattaataag 7351687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 8896499 - 8896400
Alignment:
Q  17 ttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    |||||||| |||| |||||||||||  |||||   ||  |||||||| |||||||||||||||||| ||||||||  ||| |||||||||||||||||||    
T  8896499 ttagaatatcaatgcaacatttattatttttttcccatgattatacctttatttattgaatttcatccaacttaaccactccactaactacaattaataa 8896400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 37539066 - 37539179
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaac 101  Q
    ||||||||||| | ||||||||||||||  ||  | || || |||| |||||| ||||| ||||||||||||||||||  ||||||| ||||  ||||||    
T  37539066 aaaataattgttattttagaataccaatgtaatttataatttttttccactatgatacccttatttattgaatttcatcaaacttaactactctactaac 37539165  T
Q  102 tacaattaataaga 115  Q
    ||||||||| ||||    
T  37539166 tacaattaacaaga 37539179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 6160632 - 6160525
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||||||||| ||||||||| |||| ||||||||||  |||       |||||||| || ||||||||||| |||||||||||| || | || |||    
T  6160632 caaaataattgtcattttagaatatcaatgcaacatttatgcatt-------attatacccttgtttattgaattacattcaacttaactattccattaa 6160540  T
Q  101 ctacaattaataaga 115  Q
    |||||||||||||||    
T  6160539 ctacaattaataaga 6160525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 11449824 - 11449935
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttat-ttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||| ||||||||||||||||| ||| |||||||| ||| | ||| || ||||||||| |||||||||||||||||| ||| || | ||||  | |||    
T  11449824 aaaatagttgtcactttagaatactaatgcaacatttttttttctttccattattatacc-ttatttattgaatttcatccaattttactactctattaa 11449922  T
Q  101 ctacaattaataa 113  Q
    |||||||||||||    
T  11449923 ctacaattaataa 11449935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 88
Target Start/End: Original strand, 29074817 - 29074909
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttattttt-cactattataccatt-----atttattgaatttcattcaacttaa 88  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| ||||| |||||  ||     |||||||||||||||| ||||||||    
T  29074817 aaaataattgtcactttataatacaaatacaacatttatttatttttccactaatatactcttatttaatttattgaatttcatccaacttaa 29074909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 2137520 - 2137437
Alignment:
Q  31 caacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    ||||||||||| | ||||||| ||||||| | ||||||||||||||| || ||||||||||||| || |||| |||||||||||    
T  2137520 caacatttattatttttttcattattatatctttatttattgaattttatccaacttaaatactccaataacaacaattaataa 2137437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 112
Target Start/End: Original strand, 27721470 - 27721581
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||||| ||||||| ||||| ||| || ||||||||  |||||| ||||||||||  ||||||||||||||| || ||| |||| || |  |||||    
T  27721470 aaaataattgccactttacaatacaaatgcatcatttattattttttccactattatacttttatttattgaattttatccaatttaactattctactaa 27721569  T
Q  101 ctacaattaata 112  Q
    ||||||||||||    
T  27721570 ctacaattaata 27721581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 9412982 - 9412873
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttatttat---ttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||||||| ||||| ||| ||| ||||||||||   ||||||||||  ||| ||||||||||||||||||| ||||  || || | || ||    
T  9412982 aaataattgtcactttacaatactaatgcaaaatttatttatttattttcactat--tacaattatttattgaatttcatccaacccaactattccatta 9412885  T
Q  100 actacaattaat 111  Q
    ||||||||||||    
T  9412884 actacaattaat 9412873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 15699115 - 15699173
Alignment:
Q  56 ataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    ||||| |||||||||||| ||||| |||||||| |||| ||||||||||||||||||||    
T  15699115 atacccttatttattgaacttcatccaacttaactactccactaactacaattaataag 15699173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 31978831 - 31978718
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||||||| |||||| |||||||||  |  |||| ||| |||  || ||||||||| ||||||| ||||||| ||||||||||| |||| || |||    
T  31978831 caaaataattgttactttacaataccaatgtagtattttttt-tttcccattattatacccttatttaatgaatttaattcaacttaactactccattaa 31978733  T
Q  101 ctacaattaataaga 115  Q
    ||| |||||||||||    
T  31978732 ctataattaataaga 31978718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 36701862 - 36701972
Alignment:
Q  4 aataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaacta 103  Q
    ||||||||||||| ||||||| |||| || || || ||  |||| || ||||||||  ||||||||||||||||||  |||||||  | | |||||||||    
T  36701862 aataattgtcactgtagaatatcaatgcatcacttgttatttttccattattatactcttatttattgaatttcatcaaacttaacgattccactaacta 36701961  T
Q  104 caattaataag 114  Q
    |||||||||||    
T  36701962 caattaataag 36701972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 36717966 - 36718076
Alignment:
Q  4 aataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaacta 103  Q
    ||||||||||||| ||||||| |||| || || || ||  |||| || ||||||||  ||||||||||||||||||  |||||||  | | |||||||||    
T  36717966 aataattgtcactgtagaatatcaatgcatcacttgttatttttccattattatactcttatttattgaatttcatcaaacttaacgattccactaacta 36718065  T
Q  104 caattaataag 114  Q
    |||||||||||    
T  36718066 caattaataag 36718076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 10495775 - 10495889
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacat---ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||| |||| |||| |||||    |||||| ||| | | |||||||   |||||||||||||||||| |||||||| |||| |||    
T  10495775 caaaataattgtcactttataatatcaatgcaacaccgattatttttttat-attattatatatttatttattgaatttcatccaacttaactactccac 10495873  T
Q  98 taactacaattaataa 113  Q
    ||| ||||||||||||    
T  10495874 taattacaattaataa 10495889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 115
Target Start/End: Original strand, 27896942 - 27897007
Alignment:
Q  50 actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 115  Q
    ||||||||||| ||||||||| |||||||| ||||| || |||| ||||||||| |||||||||||    
T  27896942 actattatacctttatttattaaatttcatccaactaaattactccactaactataattaataaga 27897007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 34031708 - 34031595
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatt-tatttttc-actattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||  |||||| || |||| || |||||||| | |||||| | ||||||||  ||||||||||||||||||||||| | | || | |||||    
T  34031708 aaaataattgtcgttttagactatcaatgcagcatttattatgtttttccattattatactcttatttattgaatttcattcaaccttactattacacta 34031609  T
Q  100 actacaattaataa 113  Q
    ||||||||||||||    
T  34031608 actacaattaataa 34031595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 41122005 - 41121892
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttat--ttatttttcactattatacc---attatttattgaatttcattcaacttaaatacttc 95  Q
    ||||||||||||||||||| |||| |||||||||||||||  || ||||||| |||||||||   || ||||||| ||||||||  |||     |||| |    
T  41122005 caaaataattgtcactttaaaatatcaatacaacatttattattttttttcattattatacccttataatttattaaatttcatcaaac-----tactcc 41121911  T
Q  96 actaactacaattaataag 114  Q
    |||||||||||||||||||    
T  41121910 actaactacaattaataag 41121892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 28748927 - 28749042
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc--actattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||| |||||||| |||| |||| || ||||||||  ||||||  ||||||||||| ||||||||  |||||||| ||||||||  | |  |||    
T  28748927 caaaataattatcactttataatagcaatgcagcatttattattttttcccactattatacccttatttataaaatttcatccaacttaacaattctact 28749026  T
Q  99 aactacaattaataag 114  Q
    || |||||||||||||    
T  28749027 aattacaattaataag 28749042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 40261157 - 40261275
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaactta--aatacttca 96  Q
    ||||||||||||||||||| ||||  |||| ||  ||||||  | ||||||| ||||||| | ||||||||||||||||||| ||||||   | ||| ||    
T  40261157 caaaataattgtcactttaaaatattaatataatttttattattttttttcattattatatctttatttattgaatttcatttaacttagctacactcca 40261256  T
Q  97 ctaactacaattaataaga 115  Q
    |||||||||| ||||||||    
T  40261257 ctaactacaactaataaga 40261275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 3312056 - 3312126
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttat--ttatttttcactattataccattatttatt 70  Q
    |||||||||||||||||| |||| |||||||||||||||  |||| || |||||||||||  |||||||||    
T  3312056 aaaataattgtcactttataatatcaatacaacatttattattatattccactattatactcttatttatt 3312126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 6023798 - 6023717
Alignment:
Q  35 atttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    ||||||||||||||   |||||||||||  | || ||||||||||||| |||||||| |||| || ||||||||||||||||    
T  6023798 atttatttatttttttccactattatactctcatgtattgaatttcatccaacttaactactccaataactacaattaataa 6023717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 15904751 - 15904802
Alignment:
Q  63 tatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    |||||||||||||||| |  |||||| |||||||||||||||||||||||||    
T  15904751 tatttattgaatttcacttcacttaactacttcactaactacaattaataag 15904802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 24500128 - 24500066
Alignment:
Q  31 caacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatact 93  Q
    |||||||||||  ||||||||||||| |||||||||| |||||||||||  ||||||| ||||    
T  24500128 caacatttattgttttttcactattacaccattatttgttgaatttcatctaacttaactact 24500066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 45331276 - 45331392
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaata---cttcac 97  Q
    ||||||||||| |||||| ||||||||| ||||||||||| | |||| || |||  |||| | |||||||||| ||||| |||||||| ||   || ||     
T  45331276 aaaataattgttactttaaaataccaatgcaacatttattattttttccattatattaccctaatttattgaacttcatccaacttaactattcctccat 45331375  T
Q  98 taactacaattaataag 114  Q
    |||||||||||||||||    
T  45331376 taactacaattaataag 45331392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 110
Target Start/End: Original strand, 34331240 - 34331347
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttatt-tttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||||||||| ||||||||  ||||| | ||||||||  || |||||| |||||  | ||||||||| ||||||||| || |||| |||||||||||    
T  34331240 aaaataattgtca-tttagaatgtcaatatagcatttattatttctttcaccattatgtc-ttatttattcaatttcatttaatttaattacttcactaa 34331337  T
Q  101 ctacaattaa 110  Q
    ||||||||||    
T  34331338 ctacaattaa 34331347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 39887770 - 39887885
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacattt---atttatttttcactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||| ||||  | | ||| ||||   |||| ||| ||||| ||||||  ||||||||||||||||||  ||||||| ||||  ||    
T  39887770 caaaataattgtcactttaaaatattagtgcaatatttgttatttttttctcactgttatacatttatttattgaatttcatcaaacttaattactcaac 39887869  T
Q  98 taactacaattaataa 113  Q
    ||||||| ||||||||    
T  39887870 taactactattaataa 39887885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 26256270 - 26256159
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||| ||||||| |||||||||  | |||||||| ||| ||  ||||||||||   || |||||||| |||||| |||||||| ||||  | |    
T  26256270 caaaataattgccactttataataccaatgtatcatttattaattctttccactattatattcttctttattgactttcatccaacttaactactctatt 26256171  T
Q  99 aactacaattaa 110  Q
    ||||||||||||    
T  26256170 aactacaattaa 26256159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 26258122 - 26258008
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||||||| |||||||| |||| ||| |||||     |||||||||| ||||||| ||  |||||| |||||||| || |  |||    
T  26258122 aaaataattgtcactttagaatatcaatacaatatttgtttttttttttcttctattatacccttatttactggttttcatccaacttaattattctact 26258023  T
Q  99 aactacaattaataa 113  Q
    ||| || ||||||||    
T  26258022 aaccacgattaataa 26258008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 27687265 - 27687301
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacattta 39  Q
    |||||||||||||||||||||| ||||||||||||||    
T  27687265 aaataattgtcactttagaatatcaatacaacattta 27687301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 113
Target Start/End: Complemental strand, 28436729 - 28436621
Alignment:
Q  5 ataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactac 104  Q
    |||||| |||||||||||||| |||  |  || ||||  ||||||||||||||| | ||||||||| || |||||  || |||| || |||| |||||||    
T  28436729 ataattatcactttagaatacaaatgtagtatgtattattttttcactattatatcgttatttatttaacttcatcgaatttaactaattcattaactac 28436630  T
Q  105 aattaataa 113  Q
    |||||||||    
T  28436629 aattaataa 28436621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 113
Target Start/End: Complemental strand, 29778528 - 29778464
Alignment:
Q  49 cactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    ||||||||||  |||||||||||||||| || |||||||  | ||| ||||||||||||||||||    
T  29778528 cactattatattattatttattgaattttatccaacttaggttcttaactaactacaattaataa 29778464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 4441732 - 4441674
Alignment:
Q  52 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaa 110  Q
    ||||||||| ||||||||| ||||||||  || |||| |||| ||||||||||||||||    
T  4441732 tattatacctttatttattaaatttcatctaatttaattactccactaactacaattaa 4441674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 32219846 - 32219727
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacattt-atttatt----tttcactattataccattattt-attgaatttcattcaacttaaatacttc 95  Q
    |||||| ||||| ||||| ||||||||| ||| |||| |||||||    |||||| |||||||  |||||| |||||||||||| ||||||||  ||| |    
T  32219846 aaaatatttgtctctttaaaataccaatgcaatattttatttattactttttcacaattatacatttattttattgaatttcatccaacttaaccactcc 32219747  T
Q  96 actaactacaattaataaga 115  Q
    || ||||| |||||||||||    
T  32219746 acaaactataattaataaga 32219727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 2982026 - 2981948
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattc 81  Q
    |||||||||||||||||| |||| ||||| ||  |||||| | ||||||| || |||| | ||||||||||||||||||||    
T  2982026 aaaataattgtcactttaaaatatcaatataa--tttattatttttttcattaatatatctttatttattgaatttcattc 2981948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 37275537 - 37275574
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacattt 38  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  37275537 caaaataattgtcactttagaatatcaatgcaacattt 37275574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 43500922 - 43500854
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttat--ttatttttcactattataccattattt 67  Q
    ||||||||||||||||||||||||| ||| || |||||||  ||||||| || ||||| ||| ||||||    
T  43500922 caaaataattgtcactttagaatactaatgcagcatttattattattttccattattacacccttattt 43500854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 12151124 - 12151183
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttat--ttatttttcactattata 58  Q
    ||||||||||||||||||| |||| |||| || |||||||  |||||||||| |||||||    
T  12151124 caaaataattgtcactttataatatcaatgcagcatttattattatttttcattattata 12151183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 15778051 - 15778127
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaattt 76  Q
    |||||||||| || ||||| |||| ||||||| |||||||| | ||||||| ||||||||  | |||||||||||||    
T  15778051 caaaataattatccctttataatatcaatacaccatttattatttttttcattattatactctgatttattgaattt 15778127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44426888 - 44426848
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt 41  Q
    |||||| |||||||||||||||||  |||||||||||||||    
T  44426888 caaaattattgtcactttagaatataaatacaacatttatt 44426848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 4e-31; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 34947443 - 34947558
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||||||||||||| |||||||||||  |||||  || ||||||||| | |||||||||||||||| |||||||| |||| ||||    
T  34947443 caaaataattgtcactttagaataccaatgcaacatttattatttttttccattattataccctcatttattgaatttcatccaacttaactactccact 34947542  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  34947543 aactacaattaataag 34947558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 21350812 - 21350696
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||| ||||||||| || ||||||||  |||||   |||||||||||| |||||||||||||||||| |||||||| |||| |||    
T  21350812 caaaataattgtcactttacaataccaatgcagcatttattattttttttccactattatacccttatttattgaatttcatccaacttaactactccac 21350713  T
Q  98 taactacaattaataag 114  Q
    |||||||||||||||||    
T  21350712 taactacaattaataag 21350696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 25571363 - 25571477
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||||||||||||||||||| ||||||||||| | ||||| | ||||||||| |||||||||||||||||| |||||||| || | |||||    
T  25571363 caaaataattgtcactttagaataccaatgcaacatttattatttttttaattattatacccttatttattgaatttcatccaacttaactattccacta 25571462  T
Q  100 actacaattaataag 114  Q
    ||||||| |||||||    
T  25571463 actacaactaataag 25571477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 759277 - 759162
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||||||||||||| || ||||||||  |||||  || ||||||||| |||||||||||||||||| |||||||| |||| | ||    
T  759277 caaaataattgtcactttagaataccaatgcagcatttattatttttttccattattatacccttatttattgaatttcatccaacttaactactccgct 759178  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  759177 aactacaattaataag 759162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 2459414 - 2459529
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||| ||||||| ||||||||| || ||||||||  | ||||||||||||||||| |||||||||||||||||| | |||||| |||| ||||    
T  2459414 caaaataattgacactttacaataccaatgcagcatttattattttttttcactattatacccttatttattgaatttcatcctacttaactactccact 2459513  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  2459514 aactacaattaataag 2459529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 28202495 - 28202380
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||||||||||||||||||||| ||||||||  |||||  || ||||||||  |||||||||||||||||| |||||| | |||| ||||    
T  28202495 caaaataattgtcactttagaataccaatacagcatttattatttttttccattattatactcttatttattgaatttcatccaactttactactccact 28202396  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  28202395 aactacaattaataag 28202380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 34100732 - 34100619
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttattta--tttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||||||||||| ||||| ||| |||||||||||    ||||||||||||||||| ||||||||||||| |||| |||||||| ||||||| ||    
T  34100732 aaaataattgtcactttacaatactaatgcaacatttattatgttttttcactattatacccttatttattgaatgtcatccaacttaactacttcagta 34100633  T
Q  100 actacaattaataa 113  Q
    ||||||||||||||    
T  34100632 actacaattaataa 34100619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 37245633 - 37245749
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc--actattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||| ||||||||| |||||||||||  ||||||  ||||||||||| |||||||||||||||||| ||||||||  ||| ||||    
T  37245633 caaaataattgtcactttacaataccaatgcaacatttattattttttctcactattatacccttatttattgaatttcatccaacttaaccactccact 37245732  T
Q  99 aactacaattaataaga 115  Q
     | ||||||||||||||    
T  37245733 tattacaattaataaga 37245749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 9785931 - 9786046
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    ||||||||||||||||||| ||||  ||| || ||||||||  ||||||||  ||||||||| ||||||||||||||| || |||||||| |||||||||    
T  9785931 caaaataattgtcactttaaaatattaatgcagcatttattattatttttctttattatacccttatttattgaattttatccaacttaactacttcact 9786030  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  9786031 aactacaattaataag 9786046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 6495119 - 6495006
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt-cactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||||||||||||||||| ||||  | ||||||||| ||||| || ||||||||| ||||||||| |||||||| |||||| | |||| |||||    
T  6495119 caaaataattgtcactttagaatatcaatgtagcatttattttttttttcattattatacccttatttattaaatttcatccaactttactactccacta 6495020  T
Q  100 actacaattaataa 113  Q
    ||||||||||||||    
T  6495019 actacaattaataa 6495006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 19271918 - 19271805
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||||| |||||| ||||||||| |||||||||||  |||||| | ||||||||| ||||||||| | |||||| |||||||| |||| |||||    
T  19271918 caaaataattgttactttacaataccaatgcaacatttattattttttccaatattatacccttatttattaattttcatccaacttaactactccacta 19271819  T
Q  100 actacaattaataa 113  Q
    ||||||||||||||    
T  19271818 actacaattaataa 19271805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 41506251 - 41506135
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||| |||||||| |||| |||| ||| ||||||| ||||||  || ||||||||  |||||||||||||||||| |||||||| |||| ||||    
T  41506251 caaaataattatcactttacaatatcaatgcaatatttattaatttttttcaatattatactcttatttattgaatttcatccaacttaactactccact 41506152  T
Q  99 aactacaattaataaga 115  Q
    |||||||||||||||||    
T  41506151 aactacaattaataaga 41506135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 11373614 - 11373499
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc--actattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||| |||||| |||| |||| || ||||||||  ||||||  ||||||||||  |||||||||||||||||| |||||||| |||| ||||    
T  11373614 caaaataattgttactttacaatatcaatgcagcatttattattttttcccactattatactcttatttattgaatttcatccaacttaactactccact 11373515  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  11373514 aactacaattaataag 11373499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 33819155 - 33819273
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatt--tttcactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    ||||||||||||||||||| ||||||||| || ||||||||  ||||  ||||||||||||||| ||||||| ||||||||||||||||| | |||| ||    
T  33819155 caaaataattgtcactttacaataccaatgcagcatttattattattattttcactattatacccttatttaatgaatttcattcaacttcactactcca 33819254  T
Q  97 ctaactacaattaataaga 115  Q
    | ||| |||||||||||||    
T  33819255 caaacaacaattaataaga 33819273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 21390237 - 21390353
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||| ||||||||| |||| ||||||  |||||   || ||||||||| ||||||||||||||||||  ||||||| |||| |||    
T  21390237 caaaataattgtcactttataataccaatgcaacgtttattattttttttccattattatacccttatttattgaatttcatctaacttaactactccac 21390336  T
Q  98 taactacaattaataag 114  Q
    |||||||||| ||||||    
T  21390337 taactacaatcaataag 21390353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 28103673 - 28103791
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt-----cactattataccattatttattgaatttcattcaacttaaatacttc 95  Q
    ||||||||||||||||||| ||||| | | |||||||||||  |||||     |||||||||||  |||||||||||||||||| ||||||||  |||||    
T  28103673 caaaataattgtcactttacaatacaattgcaacatttattattttttttttccactattatacgcttatttattgaatttcatccaacttaaccacttc 28103772  T
Q  96 actaactacaattaataag 114  Q
    |||||||||||||||||||    
T  28103773 actaactacaattaataag 28103791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 32346238 - 32346122
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttc-actattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||| ||| |||||||||| ||| || |||||||| | |||||| | ||||||||| ||||||||||||||||||||||||||| |||| ||||    
T  32346238 caaaataattatcattttagaatactaatgcagcatttattatctttttccattattatacccttatttattgaatttcattcaacttaactactccact 32346139  T
Q  99 aactacaattaataaga 115  Q
    || || |||||||||||    
T  32346138 aattataattaataaga 32346122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 83327 - 83444
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||||||||||||| || ||||||||  |||||   || ||| ||||  ||||||||||||||||||  ||||||| |||| | |    
T  83327 caaaataattgtcactttagaataccaatgcagcatttattattttttttccattatcatactcttatttattgaatttcatcaaacttaactactccgc 83426  T
Q  98 taactacaattaataaga 115  Q
    ||||||||||||||||||    
T  83427 taactacaattaataaga 83444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 21760170 - 21760055
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tattttt-cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||||| |  ||||||||| | | |||||||||||||| |||||||| |||| || |    
T  21760170 caaaataattgtcactttagaatatcaatgcaacatttattatatttttcctttattataccctcaattattgaatttcatccaacttaactactccatt 21760071  T
Q  99 aactacaattaataag 114  Q
    ||||||||||| ||||    
T  21760070 aactacaattagtaag 21760055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 36790681 - 36790798
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tattttt--cactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    |||||||||||||||||||||||| |||| || ||||||||  |||||||  || ||||||||| |||||||||||||||||| | || ||| ||||  |    
T  36790681 caaaataattgtcactttagaatagcaatgcagcatttattattattttttccattattatacccttatttattgaatttcatccgacataactactcaa 36790780  T
Q  97 ctaactacaattaataag 114  Q
    ||||||||||||||||||    
T  36790781 ctaactacaattaataag 36790798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 7463155 - 7463268
Alignment:
Q  1 caaaataattgtcactttagaataccaa-tacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||| ||||||||| |||| ||| | || ||||||||  |||||||||||||| || | |||||||||||||||||| |||||||| |||| |||    
T  7463155 caaaataatcgtcactttacaataacaaatgcatcatttattattatttttcactattctatctttatttattgaatttcatccaacttaactactccac 7463254  T
Q  98 taactacaattaat 111  Q
    ||||||||||||||    
T  7463255 taactacaattaat 7463268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 24516473 - 24516360
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttatttatttttc--actattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||||||| |||| |||| |||| |||||||||||   |||||  |||||| || | |||||||||||||||||| |||||||| |||| ||||||    
T  24516473 aaataattgtcattttacaatatcaatgcaacatttattatcttttcccactattttatctttatttattgaatttcatccaacttaactactccactaa 24516374  T
Q  101 ctacaattaataag 114  Q
    ||||||||||||||    
T  24516373 ctacaattaataag 24516360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 44424088 - 44424202
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||| |||||||| |||| |||| || |||||||| | ||||||| ||| ||||| |||||||||||| ||||| |||||||| |||| |||||    
T  44424088 caaaataattatcactttaaaatatcaatgcagcatttattatttttttcattataatacccttatttattgaacttcatccaacttaattactccacta 44424187  T
Q  100 actacaattaataag 114  Q
    |||||| ||||||||    
T  44424188 actacatttaataag 44424202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 13961905 - 13962017
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttatttt-tcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||||| |||||||||||||||||| || ||||||||| |||| ||| ||  ||| ||||||||||| |||||||| |||||||| |||| ||||||    
T  13961905 aaaataattatcactttagaataccaatgcagcatttattttttttctca-taggatatcattatttattaaatttcatccaacttaactactccactaa 13962003  T
Q  101 ctacaattaataag 114  Q
    ||||| ||||||||    
T  13962004 ctacacttaataag 13962017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 115
Target Start/End: Complemental strand, 32019094 - 32018986
Alignment:
Q  9 ttgtcactttagaataccaatacaacatttatttatttttc--actattataccattatttattgaatttcattcaacttaaatacttcactaactacaa 106  Q
    |||||||||| |||||| |||||||||||||||  ||||||  |||||||  || ||||||||| |||||||| |||||||| |||| ||||||| ||||    
T  32019094 ttgtcacttttgaatactaatacaacatttattattttttcccactattaatcccttatttattaaatttcatccaacttaattactccactaacaacaa 32018995  T
Q  107 ttaataaga 115  Q
    |||||||||    
T  32018994 ttaataaga 32018986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 47045651 - 47045546
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||||||||||||||||||||||||| ||||     ||| |||| |||||||||||  |||||| ||||||||||| |||||||| |||| ||||||    
T  47045651 caaaataattgtcactttagaataccaatgcaac----tttttttttccactattatactcttatttgttgaatttcatccaacttaactactacactaa 47045556  T
Q  101 ctacaattaa 110  Q
    | ||||||||    
T  47045555 ccacaattaa 47045546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 112
Target Start/End: Original strand, 49101619 - 49101719
Alignment:
Q  6 taattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactaca 105  Q
    ||||||||| ||||||||| |||| |||||||| |||| ||      |||||||  ||||||||||||||||||||||||||| |||| |||||||||||    
T  49101619 taattgtcattttagaatatcaatgcaacatttttttaatt------attatacttttatttattgaatttcattcaacttaactactccactaactaca 49101712  T
Q  106 attaata 112  Q
    |||||||    
T  49101713 attaata 49101719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 7457606 - 7457492
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||||||||| |||||||| |||| |||| |||||||||||  |||||| ||||||||||  ||||||||||||||| ||| ||||||| || | | |||    
T  7457606 caaaataattatcactttacaatatcaatgcaacatttattattttttccactattatactcttatttattgaatttaatttaacttaattattccgcta 7457507  T
Q  100 actacaattaataag 114  Q
    |||||| ||||||||    
T  7457506 actacatttaataag 7457492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 48608810 - 48608924
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||||||||| ||||  ||| ||  |||||||  |||||| | ||||||||  |||||||||||||||||| |||||||| ||| ||||||    
T  48608810 caaaataattgtcactttaaaatattaatgcagtatttattattttttccattattatactcttatttattgaatttcatccaacttaactacatcacta 48608909  T
Q  100 actacaattaataag 114  Q
    ||||| |||||||||    
T  48608910 actacgattaataag 48608924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 3178391 - 3178276
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttat-ttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||| |||||||||||| ||| |||||| | | |||| |||   || || |||||| |||||||||||||||||| |||||||| |||| |||    
T  3178391 aaaataattgttactttagaatactaatgcaacatatttattatgttttcccattaatatacccttatttattgaatttcatccaacttaactactccac 3178292  T
Q  98 taactacaattaataa 113  Q
    ||||||||||||||||    
T  3178291 taactacaattaataa 3178276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 24166934 - 24167049
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttatttt---tcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||||||| ||||||||| ||| |||||||  ||||   ||||| |||| || |||||| |||||||||||||||  ||| |||| ||||    
T  24166934 aaaataattgtcactttacaataccaatgcaatatttattatttttatttcacttttattcccttatttcttgaatttcattcaatgtaactactgcact 24167033  T
Q  99 aactacaattaataag 114  Q
    |||||| |||||||||    
T  24167034 aactactattaataag 24167049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 103
Target Start/End: Original strand, 37490319 - 37490422
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    |||| ||| ||||||||| ||||||||| |||||||||||  ||||||| |||| ||| |  |||||||||||||||||||||| |||| |||| |||||    
T  37490319 aaaacaatagtcactttaaaataccaatgcaacatttattattattttttactagtatgctcttatttattgaatttcattcaatttaattactccacta 37490418  T
Q  100 acta 103  Q
    ||||    
T  37490419 acta 37490422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 43873866 - 43873981
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||||||||||||| |||| || ||||||||  |||||  || ||| ||||  ||||||||| || ||||| |||||||| |||| ||||    
T  43873866 caaaataattgtcactttagaatatcaatgcagcatttattattttttcccattataatacatttatttattaaacttcatccaacttaactactccact 43873965  T
Q  99 aactacaattaataag 114  Q
    ||||||| ||||||||    
T  43873966 aactacatttaataag 43873981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 17610722 - 17610608
Alignment:
Q  3 aaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||| ||| ||||||||||| ||||| |||||||||||||||||  ||||| |||| |  |||||||||||||||| || | |||| || ||||||||    
T  17610722 aaataactgtgactttagaatatcaatataacatttatttattttttccactaatatatccctatttattgaatttcactctaattaactatttcactaa 17610623  T
Q  101 ctacaattaataaga 115  Q
     || |||||||||||    
T  17610622 ttaaaattaataaga 17610608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 26973966 - 26974085
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacattt-atttattttt-----cactattataccattatttattgaatttcattcaacttaaatacttc 95  Q
    |||||||||||||||||| |||| |||| ||  |||| |||| |||||     |||||||||||  ||||||| | ||||||||||||||||| |||| |    
T  26973966 aaaataattgtcactttacaatatcaatgcagtattttattttttttttcttccactattatacatttatttaataaatttcattcaacttaactactcc 26974065  T
Q  96 actaactacaattaataaga 115  Q
    ||||||||||||||||||||    
T  26974066 actaactacaattaataaga 26974085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 38391695 - 38391807
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    ||||||||||||||||||| |||| |||||      |||||| ||||||| ||||||||  |||||||||||||||||| |||||||| || | ||||||    
T  38391695 caaaataattgtcactttataatatcaatattta--ttatttttttttcattattatacttttatttattgaatttcatccaacttaattattccactaa 38391792  T
Q  101 ctacaattaataaga 115  Q
    |||||||||| ||||    
T  38391793 ctacaattaacaaga 38391807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 17828498 - 17828421
Alignment:
Q  37 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataaga 115  Q
    |||||| ||||||| ||||||| |||||||||||||| ||||| |||||||| |||| |||||||||||||| ||||||    
T  17828498 ttatttttttttcattattatatcattatttattgaa-ttcatccaacttaattactccactaactacaattgataaga 17828421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 16904320 - 16904435
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttat--ttattttt--cactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    |||||||||||||  ||||||||| ||||  |  ||||||  ||||||||  |||||||||||| ||||||||||||||| || |||||||| || ||||    
T  16904320 caaaataattgtctttttagaatatcaatgtagtatttattattattttttccactattatacccttatttattgaatttgatccaacttaattatttca 16904419  T
Q  97 ctaactacaattaata 112  Q
    ||||||| ||||||||    
T  16904420 ctaactataattaata 16904435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 27920929 - 27921047
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt----cactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    ||||||||||||||||||||||||  ||| |||||||||||  |||||    || ||| ||||  ||||| |||||| ||||| |||||||| || | ||    
T  27920929 caaaataattgtcactttagaatattaatgcaacatttattatttttttccccattataatactcttattgattgaacttcatccaacttaactaatgca 27921028  T
Q  97 ctaactacaattaataaga 115  Q
    |||||||||||||||||||    
T  27921029 ctaactacaattaataaga 27921047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 42935601 - 42935719
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc--actattataccattatttattgaatttcattcaacttaa---atacttc 95  Q
    ||||||||||||||||||||||||| ||| |||||||||||  ||||||  | ||| ||||  |||||||||||| ||||| ||||||||    | || |    
T  42935601 caaaataattgtcactttagaatacaaatgcaacatttattattttttccaattataatactcttatttattgaacttcatccaacttaactcctcctcc 42935700  T
Q  96 actaactacaattaataag 114  Q
    |||||||||||||||||||    
T  42935701 actaactacaattaataag 42935719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 46478441 - 46478364
Alignment:
Q  37 ttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    |||||| |||| |||||||||||  |||||||||||||||||| |||||||| ||||  | |||||||||||||||||    
T  46478441 ttattttttttccactattatactcttatttattgaatttcatccaacttaactactcaattaactacaattaataag 46478364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 8592626 - 8592511
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc--actattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||| ||| |||| |||| |||| || ||||||||  ||||||  ||||||||||  ||||||||| ||||||||  ||||| | |||| ||||    
T  8592626 caaaataattttcattttacaatatcaatgcagcatttattattttttcctactattatactcttatttattaaatttcatctaactttactactccact 8592527  T
Q  99 aactacaattaataag 114  Q
    ||||||||||||||||    
T  8592526 aactacaattaataag 8592511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 111
Target Start/End: Original strand, 22738665 - 22738756
Alignment:
Q  21 aataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaat 111  Q
    |||||||||  ||||||||||  |||||| ||||||||||| ||||||||| |||||||| |||||||| || |  ||||||||||||||||    
T  22738665 aataccaatggaacatttattattttttccactattatacctttatttattaaatttcatccaacttaactaatctactaactacaattaat 22738756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 40076261 - 40076350
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttat--ttatttttcactattataccattatttattgaatttcattcaacttaa 88  Q
    ||||||||||||||||||| ||||||||| || |||||||  || |||| || ||| | ||| |||||||||||||||||| ||||||||    
T  40076261 caaaataattgtcactttataataccaatgcagcatttattatttttttccattatcacacccttatttattgaatttcatccaacttaa 40076350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 30865908 - 30866026
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttat----ttatttttcactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    |||||| |||||||||||||||||  ||| || |||||||    || ||| ||| ||||||| | ||||||||||||||||||  ||||||| |||| ||    
T  30865908 caaaatgattgtcactttagaatattaatgcagcatttataatcttttttctcattattatatctttatttattgaatttcatctaacttaactactcca 30866007  T
Q  97 ctaactacaattaataaga 115  Q
    |||| || |||||||||||    
T  30866008 ctaattataattaataaga 30866026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 111
Target Start/End: Complemental strand, 4958787 - 4958674
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttatttttc----actattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||| |||| |||||| |||||| ||||||| |||| ||| ||    |||||||||||  |||| |||||| |||||  ||||||| ||||||||    
T  4958787 aaaataattatcacgttagaaaaccaatgcaacattgatttttttctctctcactattatacccctattgattgaacttcatcaaacttaactacttcac 4958688  T
Q  98 taactacaattaat 111  Q
    |||||| |||||||    
T  4958687 taactataattaat 4958674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 32018900 - 32018782
Alignment:
Q  1 caaaataatt-gtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttca 96  Q
    |||||||||| ||| |||| |||||| |||||||||||||||  |||||   ||||||||  || ||||||||| ||||| || |||||||| ||||  |    
T  32018900 caaaataatttgtcgcttttgaatactaatacaacatttattatttttttcccactattaagcccttatttattaaatttaatccaacttaattactcta 32018801  T
Q  97 ctaactacaattaataaga 115  Q
    ||||| |||||||||||||    
T  32018800 ctaacgacaattaataaga 32018782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 30107072 - 30107150
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttca 78  Q
    |||||||||||||| |||| |||| ||| ||||||||  ||||||||  ||||  ||||||||||||||||||||||||    
T  30107072 aaaataattgtcaccttaggatactaatgcaacattttattattttttccactcatataccattatttattgaatttca 30107150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 31930688 - 31930568
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttcact--attataccat--tatttattgaatttcattcaacttaa--atact 93  Q
    |||||||||||||||||||||||| ||||  |||||||||| | |||||| ||  |||| ||  |  |||||||||||||||||  |||||||  |||||    
T  31930688 caaaataattgtcactttagaatatcaatgaaacatttattatttttttccctttattaaacactcttatttattgaatttcatcaaacttaactatact 31930589  T
Q  94 tcactaactacaattaataag 114  Q
     ||||||||||||||||||||    
T  31930588 ccactaactacaattaataag 31930568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 30546485 - 30546427
Alignment:
Q  55 tataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    |||||| ||||||||||||||||| || |||||| |||| || ||||||||||||||||    
T  30546485 tatacccttatttattgaatttcactccacttaactactccaataactacaattaataa 30546427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 5524323 - 5524437
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttat---tgaatttcattcaacttaaatacttcac 97  Q
    |||||||||| |||||||| |||| |||| || ||||| | | |||| |||||||||||| ||||||||   | |||||||| |||||||| ||||  ||    
T  5524323 caaaataattctcactttacaatatcaatgcagcatttttct-ttttccactattatacctttatttattaataaatttcatccaacttaactactcaac 5524421  T
Q  98 taactacaattaataa 113  Q
    |||||| |||||||||    
T  5524422 taactataattaataa 5524437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 17610862 - 17610958
Alignment:
Q  13 cactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaata 112  Q
    |||||||||||| |||| || ||||| ||| |||   ||||||||| | || | ||||||||||||| |||||||| || |||| |||||||||||||||    
T  17610862 cactttagaatatcaatgcagcattttttttttt---actattatatctttgtgtattgaatttcatccaacttaactatttcaataactacaattaata 17610958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 37850911 - 37850798
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||||||||| |||||||||  ||| || ||||||||  | |||||||||||||   ||||||||||| ||||||  |||||||  ||| || |||    
T  37850911 caaaataattgtcattttagaatattaattcatcatttattattatttcactattatattcttatttattgattttcatctaacttaacaactccattaa 37850812  T
Q  101 ctacaattaataag 114  Q
    ||||| || |||||    
T  37850811 ctacagtttataag 37850798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 23745518 - 23745402
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt---tatttttcactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    |||||||||||| | |||||||||  ||| |||||||||||   | |||||||||| |||||  ||||||||||||||  |||| |||||| ||||  |     
T  23745518 caaaataattgttattttagaatattaatgcaacatttattatatttttttcactaatatacacttatttattgaattatattccacttaactactctaa 23745419  T
Q  98 taactacaattaataag 114  Q
     || |||||||||||||    
T  23745418 gaagtacaattaataag 23745402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 103
Target Start/End: Original strand, 37490448 - 37490510
Alignment:
Q  41 ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaacta 103  Q
    |||||||| |||| ||| |  |||||||||||||||||||||| |||| |||| |||||||||    
T  37490448 ttattttttactagtatgctcttatttattgaatttcattcaatttaattactccactaacta 37490510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 35333051 - 35333100
Alignment:
Q  64 atttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    |||| |||||||||||  ||||||| |||| |||||||||||||||||||    
T  35333051 atttgttgaatttcatctaacttaactactccactaactacaattaataa 35333100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 24122563 - 24122607
Alignment:
Q  62 ttatttattgaatttcattcaacttaaatacttcactaactacaa 106  Q
    |||||||||||||||||||| |||||  || ||||||||||||||    
T  24122563 ttatttattgaatttcattctacttatttatttcactaactacaa 24122607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 50140 - 50254
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcact 98  Q
    |||||||||||||||||||||||| |||| || ||||||||  ||||||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||    
T  50140 caaaataattgtcactttagaatatcaatgcagcatttattattatttttcactattatacccttatttatttaatttcattcaacttaattactccact 50239  T
Q  99 aactacaattaataa 113  Q
    ||||  |||||||||    
T  50240 aactgtaattaataa 50254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 22284 - 22398
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaa-cttaaatacttcact 98  Q
    |||||||||| |||||||| |||||| |||||||||||||| | ||||||||||||||| | ||||||||||||||| || |||  |||| |||| ||||    
T  22284 caaaataattatcactttacaataccgatacaacatttattatttttttcactattatatccttatttattgaattttatccaattttaactactgcact 22383  T
Q  99 aactacaattaataa 113  Q
    ||| || ||||||||    
T  22384 aaccacgattaataa 22398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 5328 - 5441
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||||||| |||||||||| |||||||||||||||||  ||||||  |  |||||| |||||||||||||||||| |||||||| |||| ||||||    
T  5328 caaaataattgttactttagaatgccaatacaacatttattattttttccattatatacctttatttattgaatttcatccaacttaactactccactaa 5427  T
Q  101 ctacaattaataag 114  Q
    ||| ||||||||||    
T  5428 ctaaaattaataag 5441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 8161 - 8045
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttattttt---cactattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    ||||||||||||||||||||||||||||| || ||||||||  |||||   || ||| ||||| |||||||||||| ||||| |||||||| |||| |||    
T  8161 caaaataattgtcactttagaataccaatgcagcatttattatttttttcccattataatacccttatttattgaacttcatccaacttaattactccac 8062  T
Q  98 taactacaattaataag 114  Q
    |||||||||||||||||    
T  8061 taactacaattaataag 8045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 136217 - 136101
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatt--tttc-actattataccattatttattgaatttcattcaacttaaatacttcac 97  Q
    |||||||||||||||||||  ||| ||||||||||||| ||| ||  |||| ||||||||||||||||||||| ||||||||  ||||||| ||||||||    
T  136217 caaaataattgtcactttacgatatcaatacaacattttttttttcttttctactattataccattatttatttaatttcatcaaacttaactacttcac 136118  T
Q  98 taactacaattaataag 114  Q
    |||||| ||||||||||    
T  136117 taactataattaataag 136101  T

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Target: scaffold0003 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 252982 - 252870
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatt-tatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||| ||||||||||||| ||||||||| ||||||||||| | ||||||| ||||||||  ||||||||||||||||||||||||||| |||| || |     
T  252982 caaaaaaattgtcactttataataccaatgcaacatttattatttttttcattattatactcttatttattgaatttcattcaacttaactactccaat- 252884  T
Q  100 actacaattaataa 113  Q
    ||||||||||||||    
T  252883 actacaattaataa 252870  T

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Target: scaffold1809 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 862 - 749
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttc-actattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||||||||| ||||||| | ||||||| | |  |||||| ||||||||||| |||||||||||||||||| ||| ||||| ||| |||||    
T  862 caaaataattgtcactttacaataccattgcaacattgaatattttttccactattatacccttatttattgaatttcatccaatttaaacactccacta 763  T
Q  100 actacaattaataa 113  Q
    |||||||| |||||    
T  762 actacaatcaataa 749  T

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Target: scaffold0012 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 105673 - 105735
Alignment:
Q  52 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    ||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  105673 tattatacccttatttatcgaatttcattcaacttaactacttcactaactacaattaataag 105735  T

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Target: scaffold0182 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 52 - 114
Target Start/End: Complemental strand, 20479 - 20417
Alignment:
Q  52 tattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    ||||||||| | |||||||||||||||| |||||||| ||||||||||||| |||||||||||    
T  20479 tattataccctcatttattgaatttcatccaacttaactacttcactaactgcaattaataag 20417  T

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Target: scaffold0110 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 1682 - 1753
Alignment:
Q  41 ttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaata 112  Q
    ||||||| || ||||||||| ||||||||||||||| || |||||||| |||| |||| |||||||||||||    
T  1682 ttattttccattattatacccttatttattgaatttaatccaacttaactactccactgactacaattaata 1753  T

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Target: scaffold0110; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 1493 - 1532
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatt 41  Q
    ||||||||||||||||||||||||| || |||||||||||    
T  1493 aaaataattgtcactttagaataccgatgcaacatttatt 1532  T

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Target: scaffold0294 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 16975 - 17086
Alignment:
Q  1 caaaataattgtcactttagaataccaatacaacatttatttatttttcactattataccattatttattgaatttcattcaacttaaatacttcactaa 100  Q
    |||||||||| |||||||| |||| |||| || ||||| |||  ||| ||||||||||   ||||||||||||||||||||||| ||| |||  || |||    
T  16975 caaaataattatcactttataatatcaatgcagcattttttt--tttccactattataattttatttattgaatttcattcaacgtaattacgccattaa 17072  T
Q  101 ctacaattaataag 114  Q
    ||| ||||||||||    
T  17073 ctataattaataag 17086  T

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Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 76229 - 76328
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatt--tatttttcactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||||||||| || |||| |||| ||  |||||||  | ||||| ||||||||||| ||||||||||||||||||  ||||||| |||| |||||    
T  76229 aaaataattgtcactctataatatcaatgcagtatttattattttttttgactattatacccttatttattgaatttcatctaacttaactactccacta 76328  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 113
Target Start/End: Complemental strand, 14298 - 14233
Alignment:
Q  48 tcactattataccattatttattgaatttcattcaacttaaatacttcactaactacaattaataa 113  Q
    ||||||||||||| ||||||||||||||||||  || |||| |||| || |||||| |||||||||    
T  14298 tcactattatacctttatttattgaatttcatcaaatttaactactccattaactataattaataa 14233  T

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Target: scaffold0302 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 16097 - 16149
Alignment:
Q  62 ttatttattgaatttcattcaacttaaatacttcactaactacaattaataag 114  Q
    |||||||||||||||||| || ||||| | ||||| |||||||||||||||||    
T  16097 ttatttattgaatttcatccatcttaactgcttcattaactacaattaataag 16149  T

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Target: scaffold0583 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 1963 - 2076
Alignment:
Q  2 aaaataattgtcactttagaataccaatacaacatttatttattttt--cactattataccattatttattgaatttcattcaacttaaatacttcacta 99  Q
    ||||||||| |||||||| || | ||||  | |||||||| ||||||  || ||||||||| ||||||||||||||||||  ||  ||| || | |||||    
T  1963 aaaataattatcactttaaaacatcaatgaagcatttatt-atttttaccattattatacccttatttattgaatttcatcgaatgtaattaatccacta 2061  T
Q  100 actacaattaataag 114  Q
    |||||||||||||||    
T  2062 actacaattaataag 2076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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