View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20661_low_21 (Length: 281)
Name: NF20661_low_21
Description: NF20661
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20661_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 7 - 267
Target Start/End: Original strand, 36794666 - 36794924
Alignment:
| Q |
7 |
aattaatatatagatatatagactacaagacattcagactattattgttcgacatatatgtattgttttcaaagagtgtgtgtgactattattgttcaat |
106 |
Q |
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| T |
36794666 |
aattaatatatagatat--agactacaagacattcagactattattgttcaacatatatgtattgttttcaaagagtgtgtgtgactattattgttcaat |
36794763 |
T |
|
| Q |
107 |
atatagtgtgactaaaagtcaaactagaataaatactacaaattggtcaaactatgactggatgagcttataggttaacttatactaattctcgtattca |
206 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
36794764 |
atatagtgtgactaaaagtcaaactagaacaaatactacaaattggtcaaactatgactggatgagcttataggttaacttatactaatgctcgtattca |
36794863 |
T |
|
| Q |
207 |
taatcattatcatttgtatatatggtctacctaattaatattcctctagcttttgtttccc |
267 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36794864 |
taatcattatcatttgtatatatggtctacctaattaatattcctctagcttttgtttccc |
36794924 |
T |
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