View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20664_low_27 (Length: 210)
Name: NF20664_low_27
Description: NF20664
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20664_low_27 |
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Alignment Details
Target: chr2 (Bit Score: 174; Significance: 8e-94; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 174; E-Value: 8e-94
Query Start/End: Original strand, 15 - 192
Target Start/End: Original strand, 36293412 - 36293589
Alignment:
| Q |
15 |
cagagataagaaatccattccctgagaatgatggtacagttcacatttggcaagggtttaaagacaggatcattccctatacgctgaaccgctacatctc |
114 |
Q |
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| T |
36293412 |
cagagataagaaatccattccctgagaatgatggtacagtccacatttggcaagggtttaaagacaggatcattccctatacgctgaaccgctacatctc |
36293511 |
T |
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| Q |
115 |
acacaaacttccgtggattcattatcacgagcttcctgacggaggtcatctgtttatctttaagaaaaatcactgtga |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36293512 |
acacaaacttccgtggattcattatcacgagcttcctgacggaggtcatctgtttatctttaagaaaaatcactgtga |
36293589 |
T |
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