View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20665_high_107 (Length: 274)

Name: NF20665_high_107
Description: NF20665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20665_high_107
NF20665_high_107
[»] chr8 (64 HSPs)
chr8 (1-207)||(24501788-24501994)
chr8 (1-183)||(26374429-26374611)
chr8 (1-183)||(42938116-42938298)
chr8 (1-207)||(2704794-2705000)
chr8 (2-207)||(7506874-7507079)
chr8 (1-207)||(42937378-42937582)
chr8 (1-207)||(42735252-42735458)
chr8 (1-207)||(5576595-5576802)
chr8 (1-182)||(10392237-10392418)
chr8 (1-183)||(23115168-23115349)
chr8 (1-207)||(41479122-41479318)
chr8 (1-176)||(10295386-10295562)
chr8 (1-176)||(14782141-14782316)
chr8 (1-176)||(43166696-43166871)
chr8 (1-176)||(44725816-44725991)
chr8 (1-173)||(18958736-18958908)
chr8 (1-176)||(9288463-9288638)
chr8 (1-207)||(43959683-43959878)
chr8 (1-176)||(26856091-26856267)
chr8 (57-183)||(4403188-4403314)
chr8 (1-176)||(19717887-19718062)
chr8 (1-173)||(39467477-39467649)
chr8 (57-177)||(4950021-4950141)
chr8 (1-165)||(32711311-32711463)
chr8 (1-183)||(39189815-39189994)
chr8 (1-176)||(18305977-18306142)
chr8 (1-176)||(32497550-32497715)
chr8 (57-173)||(13478258-13478375)
chr8 (1-176)||(7466360-7466525)
chr8 (1-117)||(16362221-16362337)
chr8 (57-162)||(8410416-8410523)
chr8 (1-106)||(31623720-31623825)
chr8 (1-106)||(4031334-4031439)
chr8 (1-117)||(42305850-42305966)
chr8 (1-117)||(37857144-37857260)
chr8 (119-183)||(9770439-9770503)
chr8 (1-37)||(18958914-18958950)
chr8 (1-32)||(2705053-2705084)
chr8 (1-32)||(7466318-7466349)
chr8 (1-32)||(7507133-7507164)
chr8 (1-32)||(14782327-14782358)
chr8 (1-32)||(18306153-18306184)
chr8 (1-32)||(19718073-19718104)
chr8 (1-32)||(23115402-23115433)
chr8 (1-32)||(24214825-24214856)
chr8 (1-32)||(26373746-26373777)
chr8 (1-32)||(39467660-39467691)
chr8 (1-32)||(41479038-41479069)
chr8 (1-32)||(42305977-42306008)
chr8 (1-32)||(42735511-42735542)
chr8 (1-32)||(42938351-42938382)
chr8 (1-32)||(43959599-43959630)
chr8 (1-32)||(44726002-44726033)
chr8 (1-30)||(4403090-4403119)
chr8 (127-176)||(31623826-31623875)
chr8 (1-29)||(7466276-7466304)
chr8 (1-29)||(10295618-10295646)
chr8 (1-29)||(14782372-14782400)
chr8 (1-29)||(18306198-18306226)
chr8 (1-29)||(32497424-32497452)
chr8 (1-29)||(32497466-32497494)
chr8 (1-29)||(39467704-39467732)
chr8 (1-29)||(43166885-43166913)
chr8 (1-29)||(44726047-44726075)
[»] chr6 (28 HSPs)
chr6 (1-207)||(6197453-6197659)
chr6 (3-183)||(1391650-1391830)
chr6 (1-182)||(2300738-2300919)
chr6 (1-207)||(28002689-28002895)
chr6 (1-183)||(29076622-29076805)
chr6 (1-183)||(29111595-29111779)
chr6 (1-183)||(7051869-7052051)
chr6 (1-176)||(31895720-31895895)
chr6 (1-176)||(7497100-7497274)
chr6 (1-176)||(34759056-34759231)
chr6 (1-176)||(34773433-34773608)
chr6 (1-176)||(14262439-14262614)
chr6 (57-176)||(31067573-31067682)
chr6 (1-148)||(656989-657122)
chr6 (1-176)||(30385075-30385238)
chr6 (68-176)||(4200443-4200541)
chr6 (134-183)||(2238668-2238717)
chr6 (142-182)||(11113733-11113773)
chr6 (1-32)||(1391564-1391595)
chr6 (1-32)||(2300972-2301003)
chr6 (1-32)||(14262625-14262656)
chr6 (1-32)||(30385249-30385280)
chr6 (1-32)||(31895678-31895709)
chr6 (1-32)||(34759243-34759274)
chr6 (1-32)||(34773391-34773422)
chr6 (57-97)||(3848290-3848330)
chr6 (1-29)||(31895636-31895664)
chr6 (1-29)||(34773349-34773377)
[»] chr4 (93 HSPs)
chr4 (1-207)||(25331155-25331361)
chr4 (1-205)||(1044831-1045035)
chr4 (1-183)||(41881082-41881265)
chr4 (1-183)||(55302867-55303049)
chr4 (1-182)||(32950837-32951018)
chr4 (1-183)||(1112917-1113099)
chr4 (1-183)||(12112969-12113151)
chr4 (1-183)||(7007398-7007580)
chr4 (1-183)||(22202039-22202221)
chr4 (1-183)||(42786708-42786890)
chr4 (1-207)||(30009653-30009859)
chr4 (1-207)||(34228559-34228765)
chr4 (1-183)||(37046450-37046634)
chr4 (1-206)||(39479332-39479539)
chr4 (1-207)||(3436617-3436823)
chr4 (1-154)||(25446074-25446227)
chr4 (1-153)||(28541722-28541874)
chr4 (20-205)||(41320853-41321038)
chr4 (1-183)||(46635648-46635824)
chr4 (1-162)||(19740929-19741090)
chr4 (1-183)||(53275863-53276046)
chr4 (1-206)||(31314719-31314910)
chr4 (1-207)||(24130957-24131154)
chr4 (48-153)||(7249795-7249900)
chr4 (1-176)||(5441428-5441603)
chr4 (1-176)||(27768080-27768255)
chr4 (1-176)||(54341168-54341343)
chr4 (1-173)||(37915851-37916023)
chr4 (1-183)||(27454078-27454261)
chr4 (1-146)||(9163100-9163245)
chr4 (1-126)||(25504696-25504821)
chr4 (1-176)||(37828409-37828584)
chr4 (1-176)||(51320945-51321120)
chr4 (1-139)||(23464979-23465117)
chr4 (1-176)||(54853475-54853650)
chr4 (1-176)||(32322115-32322290)
chr4 (1-182)||(40537161-40537327)
chr4 (48-176)||(48261198-48261326)
chr4 (57-174)||(44770862-44770979)
chr4 (1-183)||(39307253-39307435)
chr4 (1-176)||(23987238-23987403)
chr4 (1-176)||(41725149-41725321)
chr4 (1-119)||(29649731-29649849)
chr4 (89-176)||(8711978-8712065)
chr4 (1-176)||(30967316-30967481)
chr4 (57-176)||(12913304-12913413)
chr4 (57-176)||(56445362-56445471)
chr4 (89-176)||(24736447-24736534)
chr4 (1-139)||(28370948-28371086)
chr4 (1-182)||(28483923-28484093)
chr4 (1-176)||(36479249-36479413)
chr4 (108-183)||(11090435-11090510)
chr4 (68-174)||(20021424-20021531)
chr4 (3-106)||(49834890-49834993)
chr4 (7-158)||(49501546-49501687)
chr4 (7-158)||(49507611-49507752)
chr4 (48-173)||(5800049-5800164)
chr4 (66-177)||(41581795-41581905)
chr4 (1-106)||(32684065-32684169)
chr4 (1-117)||(50018275-50018391)
chr4 (83-175)||(12193135-12193227)
chr4 (1-32)||(1044750-1044781)
chr4 (1-32)||(5441386-5441417)
chr4 (1-32)||(9163058-9163089)
chr4 (1-32)||(12913163-12913194)
chr4 (1-32)||(23464895-23464926)
chr4 (1-32)||(24131207-24131238)
chr4 (1-32)||(25331071-25331102)
chr4 (1-32)||(25504874-25504905)
chr4 (1-32)||(27768038-27768069)
chr4 (1-32)||(28541638-28541669)
chr4 (1-32)||(30967492-30967523)
chr4 (1-32)||(32951071-32951102)
chr4 (1-32)||(34228817-34228848)
chr4 (109-160)||(36727972-36728023)
chr4 (1-32)||(37046687-37046718)
chr4 (1-32)||(39479592-39479623)
chr4 (1-32)||(41320802-41320833)
chr4 (1-32)||(41881318-41881349)
chr4 (1-32)||(46635877-46635908)
chr4 (1-32)||(49835006-49835037)
chr4 (1-32)||(54853661-54853692)
chr4 (119-173)||(32684018-32684072)
chr4 (1-31)||(37915809-37915839)
chr4 (1-29)||(5441344-5441372)
chr4 (1-29)||(28100587-28100615)
chr4 (1-29)||(30967537-30967565)
chr4 (1-29)||(37828640-37828668)
chr4 (1-29)||(37915725-37915753)
chr4 (1-29)||(37915767-37915795)
chr4 (1-29)||(50018191-50018219)
chr4 (1-29)||(54341084-54341112)
chr4 (1-29)||(54853706-54853734)
[»] chr3 (97 HSPs)
chr3 (1-207)||(10139122-10139328)
chr3 (1-207)||(20498233-20498439)
chr3 (1-207)||(996062-996268)
chr3 (1-183)||(19253851-19254033)
chr3 (1-207)||(3206181-3206387)
chr3 (1-183)||(33807798-33807981)
chr3 (1-183)||(3999645-3999827)
chr3 (1-183)||(6589588-6589770)
chr3 (1-183)||(29448858-29449040)
chr3 (1-207)||(37820453-37820659)
chr3 (1-183)||(54625616-54625798)
chr3 (1-207)||(35337759-35337963)
chr3 (1-177)||(33996547-33996723)
chr3 (1-183)||(40246868-40247050)
chr3 (1-183)||(25418390-25418572)
chr3 (1-183)||(44762037-44762219)
chr3 (1-183)||(53929128-53929310)
chr3 (1-183)||(6035053-6035235)
chr3 (1-182)||(52114552-52114734)
chr3 (1-166)||(51699497-51699661)
chr3 (1-176)||(17946312-17946487)
chr3 (1-176)||(40897168-40897343)
chr3 (1-175)||(29030030-29030203)
chr3 (1-176)||(18749636-18749811)
chr3 (1-176)||(36674137-36674312)
chr3 (1-176)||(44906520-44906695)
chr3 (1-129)||(1440006-1440134)
chr3 (8-148)||(22057793-22057933)
chr3 (1-169)||(51737740-51737908)
chr3 (57-183)||(5825142-5825268)
chr3 (1-176)||(11431550-11431725)
chr3 (1-176)||(34484037-34484212)
chr3 (1-176)||(26107285-26107460)
chr3 (1-176)||(32580201-32580375)
chr3 (1-176)||(48379181-48379356)
chr3 (95-183)||(6131233-6131321)
chr3 (1-183)||(27899368-27899540)
chr3 (1-139)||(52618009-52618147)
chr3 (57-176)||(54628924-54629043)
chr3 (1-172)||(20833016-20833187)
chr3 (1-163)||(31646304-31646466)
chr3 (72-183)||(1439894-1440005)
chr3 (1-176)||(52810402-52810577)
chr3 (48-176)||(50903247-50903375)
chr3 (54-151)||(55235261-55235359)
chr3 (1-176)||(10728658-10728823)
chr3 (49-183)||(52079999-52080117)
chr3 (1-117)||(10660559-10660675)
chr3 (1-176)||(39038064-39038229)
chr3 (48-183)||(39842494-39842619)
chr3 (1-176)||(37454885-37455050)
chr3 (1-106)||(23753463-23753568)
chr3 (1-182)||(44276413-44276580)
chr3 (1-165)||(6975772-6975924)
chr3 (1-111)||(539476-539586)
chr3 (130-183)||(33807680-33807733)
chr3 (48-176)||(50762067-50762185)
chr3 (108-176)||(15492874-15492942)
chr3 (9-104)||(23535890-23535984)
chr3 (119-176)||(45862983-45863040)
chr3 (1-37)||(6131317-6131353)
chr3 (1-37)||(51737915-51737951)
chr3 (1-32)||(996320-996351)
chr3 (1-32)||(3206431-3206462)
chr3 (1-32)||(6975731-6975762)
chr3 (1-32)||(10139381-10139412)
chr3 (1-32)||(10660517-10660548)
chr3 (1-32)||(10728834-10728865)
chr3 (1-32)||(18749552-18749583)
chr3 (1-32)||(19253767-19253798)
chr3 (1-32)||(20498149-20498180)
chr3 (1-32)||(27240436-27240467)
chr3 (1-32)||(34484223-34484254)
chr3 (1-32)||(35337675-35337706)
chr3 (1-32)||(36674323-36674354)
chr3 (1-32)||(37820712-37820743)
chr3 (1-32)||(40246784-40246815)
chr3 (1-32)||(44762272-44762303)
chr3 (1-32)||(44906706-44906737)
chr3 (1-32)||(50762243-50762274)
chr3 (1-32)||(50903436-50903467)
chr3 (1-32)||(54628825-54628856)
chr3 (120-166)||(12103733-12103779)
chr3 (1-31)||(12734076-12734106)
chr3 (1-29)||(1440190-1440218)
chr3 (1-29)||(2024147-2024175)
chr3 (1-29)||(10216166-10216194)
chr3 (1-29)||(10225674-10225702)
chr3 (1-29)||(10660475-10660503)
chr3 (1-29)||(11431466-11431494)
chr3 (1-29)||(18749510-18749538)
chr3 (1-29)||(23753624-23753652)
chr3 (1-29)||(27240481-27240509)
chr3 (1-29)||(31646522-31646550)
chr3 (1-29)||(36674368-36674396)
chr3 (1-29)||(44906751-44906779)
chr3 (1-29)||(50903481-50903509)
[»] chr5 (41 HSPs)
chr5 (1-183)||(21147092-21147274)
chr5 (1-207)||(7016714-7016920)
chr5 (1-183)||(33656040-33656222)
chr5 (1-177)||(5272924-5273100)
chr5 (1-163)||(849172-849334)
chr5 (1-207)||(27458925-27459130)
chr5 (1-177)||(139298-139474)
chr5 (1-207)||(32157869-32158079)
chr5 (1-183)||(1152102-1152284)
chr5 (1-149)||(6460817-6460965)
chr5 (1-176)||(7947579-7947754)
chr5 (1-176)||(14000111-14000286)
chr5 (1-176)||(13925956-13926131)
chr5 (3-173)||(4550266-4550436)
chr5 (3-176)||(39852372-39852545)
chr5 (11-183)||(9689693-9689864)
chr5 (1-143)||(14465266-14465408)
chr5 (1-183)||(22746322-22746496)
chr5 (1-117)||(4240517-4240633)
chr5 (1-117)||(1461203-1461319)
chr5 (1-183)||(9220716-9220888)
chr5 (57-176)||(5949189-5949298)
chr5 (1-176)||(40013718-40013883)
chr5 (1-106)||(37013939-37014044)
chr5 (1-40)||(16894044-16894083)
chr5 (108-183)||(1511349-1511426)
chr5 (1-32)||(1152295-1152326)
chr5 (1-32)||(4550449-4550480)
chr5 (1-32)||(5949092-5949123)
chr5 (1-32)||(6460733-6460764)
chr5 (1-32)||(7016931-7016962)
chr5 (1-32)||(9689601-9689632)
chr5 (1-32)||(32158133-32158164)
chr5 (1-32)||(33656277-33656308)
chr5 (1-32)||(37013897-37013928)
chr5 (1-32)||(40013894-40013925)
chr5 (1-31)||(43319188-43319218)
chr5 (1-29)||(4550494-4550522)
chr5 (1-29)||(14000342-14000370)
chr5 (1-29)||(26806581-26806609)
chr5 (1-29)||(37013855-37013883)
[»] chr2 (53 HSPs)
chr2 (1-183)||(24776381-24776563)
chr2 (1-207)||(16269717-16269923)
chr2 (1-207)||(20605262-20605468)
chr2 (1-207)||(31170602-31170808)
chr2 (1-207)||(14198555-14198761)
chr2 (1-207)||(12407406-12407612)
chr2 (1-207)||(35317088-35317294)
chr2 (1-207)||(43847672-43847878)
chr2 (1-207)||(305443-305649)
chr2 (1-183)||(5093049-5093231)
chr2 (1-207)||(22551741-22551947)
chr2 (1-207)||(9120152-9120358)
chr2 (1-163)||(1789468-1789630)
chr2 (1-177)||(32125276-32125455)
chr2 (1-183)||(44765801-44765974)
chr2 (1-176)||(28844581-28844756)
chr2 (1-176)||(33135649-33135823)
chr2 (1-176)||(10657432-10657607)
chr2 (1-176)||(18177293-18177468)
chr2 (1-176)||(25288185-25288360)
chr2 (65-176)||(43078653-43078764)
chr2 (48-158)||(26788859-26788969)
chr2 (1-119)||(28740349-28740467)
chr2 (1-117)||(7026630-7026746)
chr2 (1-183)||(26601214-26601384)
chr2 (1-106)||(3574873-3574978)
chr2 (54-183)||(10125302-10125421)
chr2 (1-176)||(13833441-13833606)
chr2 (1-176)||(3463698-3463863)
chr2 (57-117)||(379019-379079)
chr2 (1-90)||(215320-215409)
chr2 (1-106)||(6224626-6224732)
chr2 (119-176)||(6224576-6224633)
chr2 (1-32)||(215420-215451)
chr2 (1-32)||(305703-305734)
chr2 (1-32)||(7026588-7026619)
chr2 (1-32)||(14198813-14198844)
chr2 (1-32)||(16269633-16269664)
chr2 (1-32)||(20605094-20605125)
chr2 (1-32)||(20605178-20605209)
chr2 (1-32)||(24776297-24776328)
chr2 (1-32)||(26788768-26788799)
chr2 (1-32)||(28740478-28740509)
chr2 (1-32)||(28844539-28844570)
chr2 (1-32)||(32125192-32125223)
chr2 (1-32)||(35317004-35317035)
chr2 (48-97)||(21370638-21370687)
chr2 (1-29)||(215465-215493)
chr2 (1-29)||(378921-378949)
chr2 (1-29)||(7026546-7026574)
chr2 (1-29)||(13833620-13833648)
chr2 (1-29)||(26788726-26788754)
chr2 (1-29)||(28844497-28844525)
[»] chr7 (92 HSPs)
chr7 (1-183)||(7718361-7718543)
chr7 (1-207)||(18914710-18914916)
chr7 (1-207)||(40996624-40996830)
chr7 (1-182)||(43581090-43581271)
chr7 (1-207)||(47914292-47914498)
chr7 (1-183)||(7719259-7719441)
chr7 (1-207)||(973210-973416)
chr7 (1-207)||(30440822-30441028)
chr7 (1-207)||(34695299-34695505)
chr7 (1-207)||(47879194-47879400)
chr7 (1-183)||(12893434-12893616)
chr7 (1-183)||(44343395-44343577)
chr7 (1-207)||(20275238-20275444)
chr7 (1-207)||(39219352-39219557)
chr7 (1-207)||(34009038-34009245)
chr7 (1-183)||(32142916-32143100)
chr7 (1-183)||(10068485-10068668)
chr7 (1-176)||(29614770-29614945)
chr7 (1-183)||(7113482-7113660)
chr7 (1-176)||(23101317-23101492)
chr7 (52-153)||(43679491-43679592)
chr7 (1-176)||(3022945-3023120)
chr7 (1-176)||(28342366-28342541)
chr7 (1-176)||(39784118-39784293)
chr7 (1-176)||(7993161-7993336)
chr7 (1-176)||(18838408-18838583)
chr7 (1-173)||(33382656-33382828)
chr7 (1-176)||(8675352-8675527)
chr7 (1-176)||(9882243-9882417)
chr7 (1-176)||(28034811-28034986)
chr7 (1-155)||(12963720-12963874)
chr7 (1-183)||(9179899-9180071)
chr7 (57-183)||(43187356-43187482)
chr7 (1-183)||(3797066-3797238)
chr7 (10-115)||(31638910-31639015)
chr7 (1-183)||(12740392-12740573)
chr7 (1-164)||(727538-727692)
chr7 (57-152)||(25805767-25805862)
chr7 (1-139)||(10676463-10676601)
chr7 (68-176)||(37972873-37972981)
chr7 (1-117)||(44121965-44122081)
chr7 (1-148)||(32883801-32883948)
chr7 (1-182)||(19251558-19251729)
chr7 (1-119)||(46405494-46405612)
chr7 (57-176)||(19810874-19810983)
chr7 (68-176)||(41827390-41827498)
chr7 (1-176)||(509675-509840)
chr7 (1-117)||(40460772-40460888)
chr7 (13-173)||(44256775-44256935)
chr7 (1-163)||(44623305-44623457)
chr7 (1-117)||(37327946-37328062)
chr7 (1-117)||(33892315-33892431)
chr7 (1-117)||(39028116-39028232)
chr7 (88-168)||(10617024-10617104)
chr7 (57-164)||(1470252-1470358)
chr7 (1-117)||(29585534-29585649)
chr7 (1-106)||(17001099-17001204)
chr7 (48-106)||(47066770-47066828)
chr7 (57-112)||(447858-447913)
chr7 (1-32)||(973126-973157)
chr7 (1-32)||(8078337-8078368)
chr7 (1-32)||(12893350-12893381)
chr7 (1-32)||(12963678-12963709)
chr7 (1-32)||(17001215-17001246)
chr7 (1-32)||(18914969-18915000)
chr7 (1-32)||(19251516-19251547)
chr7 (1-32)||(23101275-23101306)
chr7 (1-32)||(28342324-28342355)
chr7 (1-32)||(29614956-29614987)
chr7 (1-32)||(29893058-29893089)
chr7 (1-32)||(34695173-34695204)
chr7 (1-32)||(34695215-34695246)
chr7 (1-32)||(37327904-37327935)
chr7 (1-32)||(39219569-39219600)
chr7 (1-32)||(39784076-39784107)
chr7 (1-32)||(43581324-43581355)
chr7 (1-32)||(43679412-43679443)
chr7 (1-32)||(44343630-44343661)
chr7 (1-32)||(48117785-48117816)
chr7 (7-36)||(8078428-8078457)
chr7 (119-176)||(17001049-17001106)
chr7 (1-29)||(509633-509661)
chr7 (1-29)||(3022903-3022931)
chr7 (1-29)||(7993077-7993105)
chr7 (1-29)||(17001260-17001288)
chr7 (1-29)||(21067817-21067845)
chr7 (1-29)||(28035000-28035028)
chr7 (1-29)||(29615001-29615029)
chr7 (1-29)||(37327862-37327890)
chr7 (1-29)||(39028032-39028060)
chr7 (1-29)||(41827291-41827319)
chr7 (1-29)||(48117830-48117858)
[»] scaffold0400 (1 HSPs)
scaffold0400 (1-207)||(15009-15215)
[»] scaffold0365 (1 HSPs)
scaffold0365 (1-207)||(15652-15858)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-207)||(38581-38786)
[»] chr1 (75 HSPs)
chr1 (1-207)||(19451784-19451990)
chr1 (1-207)||(21222165-21222371)
chr1 (1-207)||(50192526-50192733)
chr1 (1-207)||(45759985-45760191)
chr1 (1-183)||(35279690-35279872)
chr1 (1-207)||(47780729-47780935)
chr1 (1-207)||(49198245-49198450)
chr1 (1-183)||(6304252-6304435)
chr1 (1-207)||(28824349-28824554)
chr1 (4-207)||(47654327-47654531)
chr1 (3-164)||(45535964-45536125)
chr1 (1-183)||(35679128-35679310)
chr1 (10-178)||(49418111-49418279)
chr1 (1-183)||(29556122-29556305)
chr1 (7-173)||(32588963-32589129)
chr1 (57-206)||(31572174-31572323)
chr1 (1-148)||(730166-730314)
chr1 (1-183)||(9577432-9577614)
chr1 (1-176)||(6312592-6312767)
chr1 (1-176)||(29396395-29396570)
chr1 (4-183)||(37014640-37014819)
chr1 (1-175)||(46328060-46328234)
chr1 (1-154)||(48524337-48524490)
chr1 (1-173)||(51701598-51701770)
chr1 (1-176)||(48177469-48177644)
chr1 (1-176)||(25612175-25612350)
chr1 (1-183)||(33025530-33025703)
chr1 (1-176)||(9322507-9322682)
chr1 (1-176)||(15835060-15835235)
chr1 (1-176)||(28387400-28387575)
chr1 (1-176)||(29219304-29219469)
chr1 (1-176)||(38536106-38536271)
chr1 (1-176)||(38558324-38558489)
chr1 (57-115)||(955824-955882)
chr1 (1-106)||(18798509-18798614)
chr1 (1-172)||(5495117-5495278)
chr1 (1-97)||(49230904-49231000)
chr1 (57-183)||(48668785-48668901)
chr1 (48-139)||(51085860-51085951)
chr1 (1-149)||(47784405-47784542)
chr1 (1-70)||(22183388-22183457)
chr1 (57-106)||(31622536-31622585)
chr1 (1-40)||(953837-953876)
chr1 (73-163)||(38319996-38320086)
chr1 (1-32)||(730082-730113)
chr1 (1-32)||(953753-953784)
chr1 (1-32)||(15835246-15835277)
chr1 (1-32)||(18798467-18798498)
chr1 (1-32)||(19452043-19452074)
chr1 (1-32)||(19452085-19452116)
chr1 (1-32)||(21222082-21222113)
chr1 (1-32)||(22183304-22183335)
chr1 (1-32)||(25612133-25612164)
chr1 (1-32)||(28824607-28824638)
chr1 (1-40)||(31572347-31572386)
chr1 (1-32)||(35279606-35279637)
chr1 (1-32)||(38536282-38536313)
chr1 (1-32)||(38558500-38558531)
chr1 (1-32)||(46328018-46328049)
chr1 (1-32)||(47780553-47780584)
chr1 (146-206)||(48524805-48524865)
chr1 (1-32)||(49198502-49198533)
chr1 (1-32)||(49230862-49230893)
chr1 (1-31)||(29219264-29219294)
chr1 (119-147)||(955876-955904)
chr1 (1-29)||(6304492-6304520)
chr1 (1-29)||(6312508-6312536)
chr1 (1-29)||(8141366-8141394)
chr1 (1-29)||(9322738-9322766)
chr1 (1-29)||(15835291-15835319)
chr1 (127-175)||(18798615-18798663)
chr1 (1-29)||(29219222-29219250)
chr1 (1-29)||(29396626-29396654)
chr1 (1-29)||(42657765-42657793)
chr1 (1-29)||(48177700-48177728)
[»] scaffold0113 (2 HSPs)
scaffold0113 (1-183)||(38895-39077)
scaffold0113 (1-37)||(39083-39119)
[»] scaffold0004 (1 HSPs)
scaffold0004 (5-183)||(102124-102302)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-180)||(100236-100415)
[»] scaffold0276 (2 HSPs)
scaffold0276 (1-182)||(540-721)
scaffold0276 (1-32)||(774-805)
[»] scaffold0054 (1 HSPs)
scaffold0054 (1-176)||(36914-37089)
[»] scaffold0110 (2 HSPs)
scaffold0110 (57-176)||(39624-39743)
scaffold0110 (1-29)||(39855-39883)
[»] scaffold0543 (3 HSPs)
scaffold0543 (1-176)||(10585-10760)
scaffold0543 (1-32)||(10543-10574)
scaffold0543 (1-29)||(10501-10529)
[»] scaffold1504 (2 HSPs)
scaffold1504 (48-176)||(936-1063)
scaffold1504 (1-32)||(846-877)
[»] scaffold0042 (2 HSPs)
scaffold0042 (57-176)||(58083-58202)
scaffold0042 (1-29)||(58272-58300)
[»] scaffold0922 (3 HSPs)
scaffold0922 (1-113)||(4225-4337)
scaffold0922 (1-32)||(4183-4214)
scaffold0922 (1-29)||(4141-4169)
[»] scaffold0306 (2 HSPs)
scaffold0306 (1-117)||(13907-14023)
scaffold0306 (1-32)||(13865-13896)
[»] scaffold0152 (2 HSPs)
scaffold0152 (1-117)||(21304-21420)
scaffold0152 (1-32)||(21431-21462)
[»] scaffold0839 (1 HSPs)
scaffold0839 (77-163)||(3712-3798)
[»] scaffold0347 (2 HSPs)
scaffold0347 (108-183)||(14892-14967)
scaffold0347 (1-29)||(14836-14864)
[»] scaffold0007 (1 HSPs)
scaffold0007 (57-149)||(199906-199998)
[»] scaffold0010 (2 HSPs)
scaffold0010 (1-32)||(233720-233751)
scaffold0010 (1-32)||(234568-234599)


Alignment Details
Target: chr8 (Bit Score: 157; Significance: 2e-83; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 24501994 - 24501788
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24501994 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 24501895  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||||||    
T  24501894 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagat 24501795  T
Q  201 tttacta 207  Q
    |||||||    
T  24501794 tttacta 24501788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 26374611 - 26374429
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  26374611 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaataag 26374512  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  26374511 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 26374429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 42938298 - 42938116
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42938298 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 42938199  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  42938198 attttgatggattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacatgagatttcttaggattg 42938116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 2705000 - 2704794
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||| |||||||||||||||||     
T  2705000 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcaa 2704901  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||||||    
T  2704900 attttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagat 2704801  T
Q  201 tttacta 207  Q
    |||||||    
T  2704800 tttacta 2704794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 7507079 - 7506874
Alignment:
Q  2 aaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcaga 101  Q
    |||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||| ||||||||||| |||||||||||||||||||||||    
T  7507079 aaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaaattttgaaggattgtttaataaatcaga 7506980  T
Q  102 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagatt 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||       |||||||||||    
T  7506979 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacatgagatttcttaggattgtttttttcttttaagatt 7506880  T
Q  202 ttacta 207  Q
    ||||||    
T  7506879 ttacta 7506874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 42937378 - 42937582
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||||||||||||||  |||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42937378 aaaaagtcttgtggtattcaatc--gactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 42937475  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||       ||||||||||    
T  42937476 attttgatggattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaaaacatgagatttcttatgattgtttttttcttttaagat 42937575  T
Q  201 tttacta 207  Q
    |||||||    
T  42937576 tttacta 42937582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 42735458 - 42735252
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||| ||||||||||||||| |||||||||||||||||       |||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  42735458 aaaaagacttgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaagtattgtttaataaatcag 42735359  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||       ||||||||||    
T  42735358 attttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttcttttaagat 42735259  T
Q  201 tttacta 207  Q
    |||||||    
T  42735258 tttacta 42735252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 5576802 - 5576595
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatca 99  Q
    ||||||||||||||||||||||||||||||||||||||||        ||| |||| |||||||||||||||||||||||||| ||||||||||||| ||    
T  5576802 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggtattcaaaatcattcaaatttcgaagaattgtttaataaacca 5576703  T
Q  100 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaaga 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||       |||||||||    
T  5576702 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaggattgttttttccttttaaga 5576603  T
Q  200 ttttacta 207  Q
    ||||||||    
T  5576602 ttttacta 5576595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 10392418 - 10392237
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||| ||||||| ||||||||||||||| ||||||||||       |||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  10392418 aaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcattcaaatttcgaaggattgtttaataaatcag 10392319  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggatt 182  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||    
T  10392318 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttattaggatt 10392237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 23115349 - 23115168
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||| |||||||||||||||||||||||||||||||||||       |||||||| |||||||| |||||||||||| ||||||||||||||||||||||    
T  23115349 aaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa-tcattcaaatttggaaggattgtttaataaatcag 23115251  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||    
T  23115250 attttgatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggattg 23115168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 41479122 - 41479318
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||| || ||||||||||||||||||||||||| |||||||||||||||||     
T  41479122 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaatgattgtttaataaatca- 41479220  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
             ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||       ||||||||||    
T  41479221 ---------gattttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgtttttttcttttaagat 41479311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 10295562 - 10295386
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  10295562 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 10295463  T
Q  101 attttgatgga-ttttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||| |||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  10295462 attttgatggatttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 10295386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 14782316 - 14782141
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| ||||||||||||||||||||| |||||||||||||||||||  |    
T  14782316 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattgg 14782217  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  14782216 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 14782141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 43166871 - 43166696
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||  ||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  43166871 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 43166772  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| | ||| ||||||| || |||||||| ||||||||||| || |||||||||    
T  43166771 attttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttctt 43166696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 44725991 - 44725816
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| ||||||||||||||||||||| |||||||||||||||||||  |    
T  44725991 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattgg 44725892  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  44725891 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 44725816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 18958908 - 18958736
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  18958908 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 18958809  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagattt 173  Q
    ||||| ||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || ||||||    
T  18958808 attttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagattagattt 18958736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 9288638 - 9288463
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||| | | || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  9288638 aaaaagtcttgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 9288539  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||| ||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  9288538 attttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 9288463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 43959683 - 43959878
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||| ||||||||||||| ||||||||||||       | |||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  43959683 aaaaagtcttgtg-tattcaatcaagattcttaatcacttcaaaaaagactagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcag 43959781  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    ||||||||||||||||||          ||||||||||||||||||||||||||| || ||||||| |||||||||| |||||       ||||||||||    
T  43959782 attttgatggattttgtg----------gtgaaattttagcatgaaaaagtctttaattaaaacatgagatttcttatgattgtttttttcttttaagat 43959871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 26856091 - 26856267
Alignment:
Q  1 aaaaagtctt-gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatca 99  Q
    |||||||||| | ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||| ||||||||||||||      
T  26856091 aaaaagtctttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagtattgtttaataaattg 26856190  T
Q  100 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||  |||| ||||||||||||    
T  26856191 gattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaaaaataagatttctt 26856267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 57 - 183
Target Start/End: Original strand, 4403188 - 4403314
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 156  Q
    |||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||| ||||| ||||||| || |||||||||||||    
T  4403188 tattcaaaatcattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtctttc 4403287  T
Q  157 atgaaaacataagatttcttaggattg 183  Q
    ||||||| || ||||||||| ||||||    
T  4403288 atgaaaatatgagatttcttgggattg 4403314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 19718062 - 19717887
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||| ||||||||||||||  |    
T  19718062 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagaattgtttaataaattgg 19717963  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||| ||||||||||||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||||    
T  19717962 attttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttctt 19717887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 39467649 - 39467477
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||       
T  39467649 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattga 39467550  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagattt 173  Q
    ||||||||||||||| ||||||||| ||||| ||||||| || |||||| ||||||||||||| || ||||||    
T  39467549 attttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagattt 39467477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 57 - 177
Target Start/End: Complemental strand, 4950141 - 4950021
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 156  Q
    ||||||||||||||||| |||| || |||| |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | ||||    
T  4950141 tattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtggaattttctagtgaaattttagcatgaaaaaatatttc 4950042  T
Q  157 atgaaaacataagatttctta 177  Q
    ||| |||||||||||||||||    
T  4950041 atgcaaacataagatttctta 4950021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 32711463 - 32711311
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  32711463 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcag 32711364  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 165  Q
    |||||| ||||             |||| ||||||||||||||||||||||||||||||||||||    
T  32711363 attttg-tgga-----------aatctattgaaattttagcatgaaaaagtctttcatgaaaaca 32711311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 39189994 - 39189815
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||||||||||||| || |||||| |||| ||       ||||  || ||||||| |||||||||||||||||||||||||||||||||  |    
T  39189994 aaaaagtcttgtggtattcaataaaaactctttatcatttaaaaaaagtctcatg-tattcaacatcattcaaatttcgaaggattgtttaataaat-tg 39189897  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    | ||||||||||||||  | |||||||||| |||||||| || |||||| |||||||||||||||| ||||||||| ||||||    
T  39189896 aatttgatggattttgatgaattttctagt-aaattttaacaagaaaaaatctttcatgaaaacatgagatttcttgggattg 39189815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 18306142 - 18305977
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||       
T  18306142 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaat--- 18306046  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
           |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  18306045 -------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 18305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 32497550 - 32497715
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||       
T  32497550 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaat--- 32497646  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
           |||||||||||||||||| ||||| ||||||| || || ||||||||||||||||| || |||||||||    
T  32497647 -------tggattttgtgggattttgtagtgtaattttaacaagagaaagtctttcatgaaaagatgagatttctt 32497715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 173
Target Start/End: Complemental strand, 13478375 - 13478258
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 156  Q
    ||||||||||| || |||||||||||||||||||||||||| |||||| | |||||||||| ||||||| |||  |||||||||||||| |||||||||     
T  13478375 tattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggattttttagctaaattttagcatgataaagtctttt 13478276  T
Q  157 atg-aaaacataagattt 173  Q
    ||| ||||||||||||||    
T  13478275 atgaaaaacataagattt 13478258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 7466360 - 7466525
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || ||| |||       |||| ||| ||||||||||||||||||||| |||| ||||||||||||||       
T  7466360 aaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaagaattgtttaataaat--- 7466456  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
           |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  7466457 -------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 7466525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 16362221 - 16362337
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || || ||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  16362221 aaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 16362320  T
Q  101 attttgatggattttgt 117  Q
    |||||||||||||||||    
T  16362321 attttgatggattttgt 16362337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 57 - 162
Target Start/End: Complemental strand, 8410523 - 8410416
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggga--ttttctagtgaaattttagcatgaaaaagtctt 154  Q
    |||||||||||||| |||||| ||||||||||||| |||||  || |||||||||||||||||||  |||| |||||||||||||| |||| ||||||||    
T  8410523 tattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggattttttttagtgaaattttagtatgacaaagtctt 8410424  T
Q  155 tcatgaaa 162  Q
    ||| ||||    
T  8410423 tcacgaaa 8410416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 31623720 - 31623825
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  31623720 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 31623819  T
Q  101 attttg 106  Q
    ||||||    
T  31623820 attttg 31623825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 4031439 - 4031334
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || || | ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  4031439 aaaaagtcttgaggtattcaatcaagacttttcataaattaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 4031340  T
Q  101 attttg 106  Q
    ||||||    
T  4031339 attttg 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 42305966 - 42305850
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||        ||| ||| |||||||||| |||||||||||||||||||||||||| |||  |    
T  42305966 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaataattcaaatttcgaaggattgtttaatcaattgg 42305867  T
Q  101 attttgatggattttgt 117  Q
    ||||| |||||||||||    
T  42305866 attttaatggattttgt 42305850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 37857144 - 37857260
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||| ||| |||||||||| |||| | || |||||||       |||| ||| |||||||| ||||||||||||  ||||||||||||||||||  |    
T  37857144 aaaaagttttgaggtattcaattaagatttttcatcacttaaaaaaagtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattgg 37857243  T
Q  101 attttgatggattttgt 117  Q
    |||||||||||||||||    
T  37857244 attttgatggattttgt 37857260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 9770503 - 9770439
Alignment:
Q  119 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||| |||||||||| ||| ||||| | |||||| ||||||| ||||||||||||||||    
T  9770503 ggattttctaatgaaattttaacataaaaaaatatttcatcaaaacatgagatttcttaggattg 9770439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 18958950 - 18958914
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatca 37  Q
    |||||||||||||||||||||||||||||||| ||||    
T  18958950 aaaaagtcttgtggtattcaatcaagactctttatca 18958914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 2705084 - 2705053
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  2705084 aaaaagtcttgtggtattcaatcaagactctt 2705053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 7466318 - 7466349
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  7466318 aaaaagtcttgtggtattcaatcaagactctt 7466349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 7507164 - 7507133
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  7507164 aaaaagtcttgtggtattcaatcaagactctt 7507133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 14782358 - 14782327
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  14782358 aaaaagtcttgtggtattcaatcaagactctt 14782327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 18306184 - 18306153
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  18306184 aaaaagtcttgtggtattcaatcaagactctt 18306153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 19718104 - 19718073
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  19718104 aaaaagtcttgtggtattcaatcaagactctt 19718073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 23115433 - 23115402
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  23115433 aaaaagtcttgtggtattcaatcaagactctt 23115402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 24214856 - 24214825
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  24214856 aaaaagtcttgtggtattcaatcaagactctt 24214825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 26373746 - 26373777
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  26373746 aaaaagtcttgtggtattcaatcaagactctt 26373777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 39467691 - 39467660
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  39467691 aaaaagtcttgtggtattcaatcaagactctt 39467660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 41479038 - 41479069
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  41479038 aaaaagtcttgtggtattcaatcaagactctt 41479069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 42306008 - 42305977
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  42306008 aaaaagtcttgtggtattcaatcaagactctt 42305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 42735542 - 42735511
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  42735542 aaaaagtcttgtggtattcaatcaagactctt 42735511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 42938382 - 42938351
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  42938382 aaaaagtcttgtggtattcaatcaagactctt 42938351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 43959599 - 43959630
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  43959599 aaaaagtcttgtggtattcaatcaagactctt 43959630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 44726033 - 44726002
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  44726033 aaaaagtcttgtggtattcaatcaagactctt 44726002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 4403090 - 4403119
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactc 30  Q
    ||||||||||||||||||||||||||||||    
T  4403090 aaaaagtcttgtggtattcaatcaagactc 4403119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 31623826 - 31623875
Alignment:
Q  127 tagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||| ||||||| || |||||||| ||||||||||| ||||||||||||    
T  31623826 tagtgtaattttaacaagaaaaagtttttcatgaaaagataagatttctt 31623875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 7466276 - 7466304
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  7466276 aaaaagtcttgtggtattcaatcaagact 7466304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 10295646 - 10295618
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  10295646 aaaaagtcttgtggtattcaatcaagact 10295618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 14782400 - 14782372
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  14782400 aaaaagtcttgtggtattcaatcaagact 14782372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 18306226 - 18306198
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  18306226 aaaaagtcttgtggtattcaatcaagact 18306198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 32497424 - 32497452
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  32497424 aaaaagtcttgtggtattcaatcaagact 32497452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 32497466 - 32497494
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  32497466 aaaaagtcttgtggtattcaatcaagact 32497494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 39467732 - 39467704
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  39467732 aaaaagtcttgtggtattcaatcaagact 39467704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 43166913 - 43166885
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  43166913 aaaaagtcttgtggtattcaatcaagact 43166885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 44726075 - 44726047
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  44726075 aaaaagtcttgtggtattcaatcaagact 44726047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 157; Significance: 2e-83; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 6197659 - 6197453
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6197659 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 6197560  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||||||    
T  6197559 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagat 6197460  T
Q  201 tttacta 207  Q
    |||||||    
T  6197459 tttacta 6197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 3 - 183
Target Start/End: Original strand, 1391650 - 1391830
Alignment:
Q  3 aaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagat 102  Q
    ||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  1391650 aaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcagat 1391749  T
Q  103 tttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||    
T  1391750 tttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggattg 1391830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 2300919 - 2300738
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||||||||||||||||||||||| |||||||       ||||| || |||| |||||||||||||||||||||||||||||||||||| ||    
T  2300919 aaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtattgaaaatcattcaaatttcgaaggattgtttaataaataag 2300820  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggatt 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2300819 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatt 2300738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 28002689 - 28002895
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||| |||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  28002689 aaaaagtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcag 28002788  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||||       ||||||||||    
T  28002789 attttgatggattttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaagcttcttaggattgtttttttcttttaagat 28002888  T
Q  201 tttacta 207  Q
    |||||||    
T  28002889 tttacta 28002895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 29076622 - 29076805
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatca 99  Q
    ||||||||||||||||||||||| ||| ||||||||||||        |||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  29076622 aaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtattcaaaatcattcaaatttcgaaggattgtttaataaatca 29076721  T
Q  100 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||| ||||||| |||||| |||||||||    
T  29076722 gattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaacatgagattttttaggattg 29076805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 29111595 - 29111779
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnn--gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatc 98  Q
    ||||||||||||||||||||||| ||| ||||||||||||         |||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  29111595 aaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtctagtagtattcaaaatcattcaaatttcgaaggattgtttaataaatc 29111694  T
Q  99 agattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||| ||||||| |||||| |||||||||    
T  29111695 agattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaacatgagattttttaggattg 29111779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 7051869 - 7052051
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||| |||||||||||||| |||||||       |||  |||||||||||||||||||||||||||||||||||||||||||||  |    
T  7051869 aaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattgg 7051968  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||| ||| ||| ||||||||||| ||||    
T  7051969 attttgatggattttgtaggattttctagtaaaattttagcatgaaaaagtttttcataaaatcatgagatttcttagaattg 7052051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 31895720 - 31895895
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||  |||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  31895720 aaaaagtcttgaagtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 31895819  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  31895820 attttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 31895895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 7497100 - 7497274
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||| | || |||||||       |||| ||| |||||||||||||||||||||||||||| ||||||||||||  |    
T  7497100 aaaaagtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattgg 7497199  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||| ||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  7497200 attttgatggattttgt-ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 7497274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 34759231 - 34759056
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||  |||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||| ||||||||||||||||||  |    
T  34759231 aaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttccaaggattgtttaataaattgg 34759132  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| || |||||||||    
T  34759131 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 34759056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 34773433 - 34773608
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||        ||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  34773433 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 34773532  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    |||||||||||||||||||||||||  |||| ||||||| || |||||||||||||||||||| || |||||||||    
T  34773533 attttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 34773608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 14262614 - 14262439
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||| | || |||| ||       |||| ||| |||||||||||||| ||||||||||||||||||||||||||  |    
T  14262614 aaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattgg 14262515  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||  ||||||||    
T  14262514 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgggatttctt 14262439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 57 - 176
Target Start/End: Original strand, 31067573 - 31067682
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 156  Q
    |||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||    
T  31067573 tattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 31067662  T
Q  157 atgaaaacataagatttctt 176  Q
    || |||| || |||||||||    
T  31067663 ataaaaagatgagatttctt 31067682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 656989 - 657122
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| ||||| ||||||||||||||           ||||||||||| |    
T  656989 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatcattcaaatt-----------tttaataaatctg 657077  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaa 148  Q
    ||| |||||||||||||||||||   ||||||||||||| ||||||||    
T  657078 attctgatggattttgtgggatt---tagtgaaattttatcatgaaaa 657122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 30385238 - 30385075
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||| ||| ||||||||||||| | | || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||       
T  30385238 aaaaagtattgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat--- 30385142  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
           |||||||||||||||||| ||||| ||||||| ||  | ||||||||||||||||| || |||||||||    
T  30385141 -------tggattttgtgggattttgtagtgtaattttaaca--acaaagtctttcatgaaaagatgagatttctt 30385075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 176
Target Start/End: Complemental strand, 4200541 - 4200443
Alignment:
Q  68 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacata 167  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||||||||||||||||| ||     
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatg 4200452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 2238668 - 2238717
Alignment:
Q  134 attttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||||| |||||||| |||||||||||||||| |||||||||| |||||    
T  2238668 attttagtatgaaaaaatctttcatgaaaacatgagatttcttaagattg 2238717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 182
Target Start/End: Complemental strand, 11113773 - 11113733
Alignment:
Q  142 atgaaaaagtctttcatgaaaacataagatttcttaggatt 182  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  11113773 atgaaaacgtctttcatgaaaacatgagatttcttaggatt 11113733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 1391564 - 1391595
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  1391564 aaaaagtcttgtggtattcaatcaagactctt 1391595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 2301003 - 2300972
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  2301003 aaaaagtcttgtggtattcaatcaagactctt 2300972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 14262656 - 14262625
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  14262656 aaaaagtcttgtggtattcaatcaagactctt 14262625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 30385280 - 30385249
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  30385280 aaaaagtcttgtggtattcaatcaagactctt 30385249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 31895678 - 31895709
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  31895678 aaaaagtcttgtggtattcaatcaagactctt 31895709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 34759274 - 34759243
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  34759274 aaaaagtcttgtggtattcaatcaagactctt 34759243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 34773391 - 34773422
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  34773391 aaaaagtcttgtggtattcaatcaagactctt 34773422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 3848290 - 3848330
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaat 97  Q
    |||||||||||||| |||||| ||| |||||||||||||||    
T  3848290 tattcaaaatcatttaaattttgaatgattgtttaataaat 3848330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 31895636 - 31895664
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  31895636 aaaaagtcttgtggtattcaatcaagact 31895664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 34773349 - 34773377
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  34773349 aaaaagtcttgtggtattcaatcaagact 34773377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 157; Significance: 2e-83; HSPs: 93)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 25331155 - 25331361
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25331155 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttcaaaggattgtttaataaatcag 25331254  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||||||    
T  25331255 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagat 25331354  T
Q  201 tttacta 207  Q
    |||||||    
T  25331355 tttacta 25331361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 1044831 - 1045035
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||| ||||||| ||||||||||||||||||||||||||    
T  1044831 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaccattcaactttcgaaggattgtttaataaatcag 1044930  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       ||||||||||    
T  1044931 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttagaattgtttttttcttttaagat 1045030  T
Q  201 tttac 205  Q
    |||||    
T  1045031 tttac 1045035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 41881265 - 41881082
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatca 99  Q
    ||||||||||||||||||||||||||||||||||||||||        || ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  41881265 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatca 41881166  T
Q  100 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  41881165 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 41881082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 55302867 - 55303049
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||| |||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  55302867 aaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 55302966  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  55302967 attttgatggatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattg 55303049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 32951018 - 32950837
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||| |||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32951018 aaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 32950919  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggatt 182  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||    
T  32950918 attttgatgaattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttcttaagatt 32950837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 1112917 - 1113099
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||| || ||||||||||||||||||    
T  1112917 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcag 1113016  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  1113017 attttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatgagatttcttaggattg 1113099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 12112969 - 12113151
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||| ||||||||||||||       ||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  12112969 aaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 12113068  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  12113069 attttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttgggattg 12113151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 7007398 - 7007580
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||| |||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7007398 aaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 7007497  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||  | |||||||||||||| |||||||||| |||||    
T  7007498 attttgatgaattttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaaaacatgagatttcttaagattg 7007580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 22202039 - 22202221
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| |||||||||||||| ||||||| || ||||||||||||||| |     
T  22202039 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcaaaagattgtttaataaataaa 22202138  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  22202139 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacattagatttcttagcattg 22202221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 42786708 - 42786890
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||       |||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  42786708 aaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcat 42786807  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| |||||    
T  42786808 attttgatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttcttatgattg 42786890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 30009859 - 30009653
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||| |||||||||||||||||||||||||||||||       |||||||| |||||||||||||| ||||||  || ||||||||||||||||||    
T  30009859 aaaaagtcctgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaattttaaatgattgtttaataaatcag 30009760  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||       ||||||||||    
T  30009759 attttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagat 30009660  T
Q  201 tttacta 207  Q
    |||||||    
T  30009659 tttacta 30009653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 34228765 - 34228559
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||| |||||||||||||||| | ||||||||||||       |||||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  34228765 aaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatcattgaaatttcgaatgattgtttaataaatcag 34228666  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       ||||||||||    
T  34228665 attttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagat 34228566  T
Q  201 tttacta 207  Q
    |||||||    
T  34228565 tttacta 34228559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 37046634 - 37046450
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatca 99  Q
    ||||||| ||||||||||||||||||||||||||||||||        ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37046634 aaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgatatttaaaatcattcaaatttcgaaggattgtttaataaatca 37046535  T
Q  100 gattttgatggattttgtgggattttctagtg-aaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  37046534 gattttgatggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaggattg 37046450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 39479539 - 39479332
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnn--gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatc 98  Q
    ||||||||||||||||||||||||||||||||||||||||         | || ||| |||||||||||||||||||||||||| |||||||||||||||    
T  39479539 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtggtattcaaaatcattcaaatttcgaagaattgtttaataaatc 39479440  T
Q  99 agattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaag 198  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||       ||||||||    
T  39479439 agattttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtctttcatgaaagcatgagatttcttaggattgtttttttcttttaag 39479340  T
Q  199 attttact 206  Q
    ||||||||    
T  39479339 attttact 39479332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 3436617 - 3436823
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||| ||||||| ||||||||||||||||||||||| ||        |||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  3436617 aaaaaatcttgtgatattcaatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 3436716  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    ||||||||| ||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||       ||||||||||    
T  3436717 attttgatgaattttgtgggattttgtagtgaaattttaacatgaaaaagtttttcatgaaaacataagatttcttagaattgtttttttcttttaagat 3436816  T
Q  201 tttacta 207  Q
    |||||||    
T  3436817 tttacta 3436823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 25446074 - 25446227
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||| ||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  25446074 aaaaattcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcag 25446173  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctt 154  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25446174 attttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 28541722 - 28541874
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||| ||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  28541722 aaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcag 28541821  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 153  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28541822 attttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 28541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 20 - 205
Target Start/End: Original strand, 41320853 - 41321038
Alignment:
Q  20 aatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgg 119  Q
    |||||||||||||||||| ||       |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41320853 aatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgg 41320952  T
Q  120 gattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagattttac 205  Q
    ||| ||||||||||||||||| ||||||||||||||||| ||||||| |||||||||| |||||       |||||||||||||||    
T  41320953 gatgttctagtgaaattttagtatgaaaaagtctttcataaaaacatgagatttcttaagattgattttttcttttaagattttac 41321038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 46635824 - 46635648
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       || ||||  ||||||||||||||||||||||||||||||||||||||||| ||    
T  46635824 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtattcaaaatcattcaaatttcgaaggattgtttaataaataag 46635725  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||      |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  46635724 att------gattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattg 46635648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 19741090 - 19740929
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||| ||||||||||| |||||||| ||||||||||       |||| ||| |||| |||||||||||||||||||||||||||||||||||| ||    
T  19741090 aaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggtattaaaaatcattcaaatttcgaaggattgtttaataaattag 19740991  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 162  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19740990 attttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcatgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 53275863 - 53276046
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||| |||||||||||||| | ||||||||||       ||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  53275863 aaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaaatcattcaaatttcgaaggattgtgtaataaatcag 53275962  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttca-tgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||| ||||||||| | |||||||||||||||||||||||||| | ||||| | |||||| |||||||||    
T  53275963 attttgatggattttgtgagattttctaataaaattttagcatgaaaaagtctttcattaaaaactttagattttttaggattg 53276046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 31314910 - 31314719
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||||||||||||    |||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31314910 aaaaagtcttgtggtattcaa----gactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 31314815  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    ||||||          |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||||||    
T  31314814 attttg----------tgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagat 31314725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 24131154 - 24130957
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||          ||||||| ||||||||||||||||||    
T  24131154 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa----------tttcgaatgattgtttaataaatcag 24131065  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatg-aaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaaga 199  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| ||||||||||||||||       |||||||||    
T  24131064 attttgatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaacatgagatttcttaggattgtttttttcttttaaga 24130965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 7249900 - 7249795
Alignment:
Q  48 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 147  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7249900 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 7249801  T
Q  148 aagtct 153  Q
    ||||||    
T  7249800 aagtct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 5441428 - 5441603
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  5441428 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 5441527  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  5441528 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 5441603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 27768080 - 27768255
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  27768080 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 27768179  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  27768180 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 27768255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 54341168 - 54341343
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  54341168 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 54341267  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  54341268 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 54341343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 37915851 - 37916023
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  37915851 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 37915950  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagattt 173  Q
    ||||||||||||||||||||||||| ||||| | ||||| || ||||||||| |||||||||| |||||||||    
T  37915951 attttgatggattttgtgggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaagataagattt 37916023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 27454261 - 27454078
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatca 99  Q
    ||||||||||||  || |||||||||| ||||||||||||        || ||||| ||||||||||||||||||||| ||| |||| ||||||||||||    
T  27454261 aaaaagtcttgttataatcaatcaagattcttaatcacttacaaaaaagtttagtggtattcaaaatcattcaaattttgaaagattatttaataaatca 27454162  T
Q  100 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||| |||||    
T  27454161 gattttgatgaattttgtggaattttctagtgaaattttggcatgaaaaagtctttcatgaaaacataatatttgttaagattg 27454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 9163100 - 9163245
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||| | || ||||| |       |||| ||||||||||||||||||||||||||||||||||||||||||||| |     
T  9163100 aaaaagtcttgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattaa 9163199  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaa 146  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  9163200 attttgatggattttgtggaattttctagtgaaattttagcatgaa 9163245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 25504821 - 25504696
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||| ||||||| ||||||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25504821 aaaaattcttgtgatattcaatcaagactcttaatcacttaaaaaaagtccagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 25504722  T
Q  101 attttgatggattttgtgggattttc 126  Q
    ||||||||||||||||||||||||||    
T  25504721 attttgatggattttgtgggattttc 25504696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 37828584 - 37828409
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||| | || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  37828584 aaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 37828485  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| |||||||  | |||||||||||||||||||| || |||||||||    
T  37828484 attttgatggattttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcatgaaaagatgagatttctt 37828409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 51320945 - 51321120
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  51320945 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 51321044  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||  ||||| ||||| ||||||| || |||||||| ||||||||||| || |||||||||    
T  51321045 attttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttctt 51321120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 23464979 - 23465117
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||| ||||  ||||||||||||||||||||||||||       |||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  23464979 aaaaagttttgtaatattcaatcaagactcttaatcacttaaaataagtctagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcag 23465078  T
Q  101 attttgatggattttgtgggattttctagtgaaatttta 139  Q
    | |||||||||||||||||||||||||||| ||||||||    
T  23465079 aatttgatggattttgtgggattttctagttaaatttta 23465117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 54853650 - 54853475
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||  |||||||||||||||| || |||||||       |||| ||| |||||||||| ||||||||||| ||||||||||||||||||  |    
T  54853650 aaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattgg 54853551  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| || |||||||||    
T  54853550 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 54853475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 32322115 - 32322290
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||| | || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||       
T  32322115 aaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattga 32322214  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| |||||||  | ||||| ||||||||| |||| || |||||||||    
T  32322215 attttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaagatgagatttctt 32322290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 40537327 - 40537161
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||| ||||||||||||||       ||     | |||||||||||||| |||||||||| |||||||||||||||| |    
T  40537327 aaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaatgt-----ggtattcaaaatcatttaaatttcgaatgattgtttaataaatctg 40537233  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggatt 182  Q
    |||||||||||||||||||          ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40537232 attttgatggattttgtgg----------tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatt 40537161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 48261198 - 48261326
Alignment:
Q  48 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 147  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48261297  T
Q  148 aagtctttcatgaaaacataagatttctt 176  Q
    || ||||||||||||| || |||||||||    
T  48261298 aaatctttcatgaaaatatgagatttctt 48261326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 57 - 174
Target Start/End: Complemental strand, 44770979 - 44770862
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 156  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||  | |||||||||||||    
T  44770979 tattcaaaatcattcaaattttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtctttc 44770880  T
Q  157 atgaaaacataagatttc 174  Q
    ||||  |||| |||||||    
T  44770879 atgacgacatgagatttc 44770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 39307435 - 39307253
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||| |||| |||| ||       |||| ||| |||||| ||||||||||||||| || |||| |||||| |||       
T  39307435 aaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcataatcattcaaatttctaaagattatttaatgaattga 39307336  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
     |||||||| ||||||||||||||||||||||||||||| ||||||||||| | | || ||||||| ||||||||||| ||||    
T  39307335 gttttgatgaattttgtgggattttctagtgaaattttaacatgaaaaagtttctgataaaaacatgagatttcttagaattg 39307253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 23987238 - 23987403
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||| ||| || |||||||       |||| ||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  23987238 aaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattag 23987337  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||          ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  23987338 attttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 23987403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 41725149 - 41725321
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||  |||| ||||||||||| || ||||| |       |||| ||||||||||||||||||||||||| ||||||||||||||   ||  |    
T  41725149 aaaaagtcttgatgtatgcaatcaagacttttcatcacctaaaaaaagtcttgtgatattcaaaatcattcaaattttgaaggattgtttaa---attgg 41725245  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||| ||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| || |||||||||    
T  41725246 attttgatgaattttgtgggattttatagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 41725321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 29649849 - 29649731
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||  |    
T  29649849 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattgg 29649750  T
Q  101 attttgatggattttgtgg 119  Q
    |||||||||||||||||||    
T  29649749 attttgatggattttgtgg 29649731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 8711978 - 8712065
Alignment:
Q  89 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||| |||||||||    
T  8711978 ttaataaattggattttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttctt 8712065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 30967481 - 30967316
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||| ||| ||||||||||||||| | || |||||||       |||| ||| |||||||||||||||||||||| ||||||||||||||||||       
T  30967481 aaaaagttttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat--- 30967385  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
           |||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||||    
T  30967384 -------tggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaaataagatttctt 30967316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 176
Target Start/End: Original strand, 12913304 - 12913413
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 156  Q
    ||||||||||||||||||||| |||||||||||||||||||          |||||||||||||||||||||||||||||||| || |||||||| ||||    
T  12913304 tattcaaaatcattcaaattttgaaggattgtttaataaat----------tggattttgtgggattttctagtgaaattttaacaagaaaaagtatttc 12913393  T
Q  157 atgaaaacataagatttctt 176  Q
    ||||| |||| |||||||||    
T  12913394 atgaagacatgagatttctt 12913413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 176
Target Start/End: Complemental strand, 56445471 - 56445362
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 156  Q
    ||||||||||||||||||||||||| |||||||||||||||          ||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  56445471 tattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtgggattttctagtgaaactttagcaagaaaaagtctttc 56445382  T
Q  157 atgaaaacataagatttctt 176  Q
    || || |||| |||||||||    
T  56445381 ataaagacatgagatttctt 56445362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 24736447 - 24736534
Alignment:
Q  89 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    |||||||||  ||||||||||||||||||| |||||||||||||||||||| || ||| ||||||||||||||||||| |||||||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttctt 24736534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 28370948 - 28371086
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| | ||||||||||| ||| || |||||||       ||||  || |||||||||||||||||||||  ||||||||||||||||||       
T  28370948 aaaaagtcttgagatattcaatcaaaactttttatcacttaaataaagtctcatggtattcaaaatcattcaaattttaaaggattgtttaataaattga 28371047  T
Q  101 attttgatggattttgtgggattttctagtgaaatttta 139  Q
    |||||| || |||||||||||||||||||||||||||||    
T  28371048 attttggtgaattttgtgggattttctagtgaaatttta 28371086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 28483923 - 28484093
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||| ||||||||||       
T  28483923 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaat--- 28484019  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggatt 182  Q
           |||||||||| ||||||| ||||| || |||| || |||||||||||||||||||| |  |||||||||| ||||    
T  28484020 -------tggattttgtaggattttgtagtgtaa-tttaacaagaaaaagtctttcatgaaaagacgagatttcttaagatt 28484093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 36479413 - 36479249
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| |||||||||| |||| | || |||||||       |||| ||| |||||||||| ||||||||||||||||||| ||||||||||  |    
T  36479413 aaaaagtcttgaggtattcaattaagatttttcatcacttaaaaaaagtctcgtggtattcaaaattattcaaatttcgaaggattatttaataaattgg 36479314  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    |||||||||||||||           ||||||||||||||||  ||||||||||| |||||||||| |||||||||    
T  36479313 attttgatggatttt-----------tagtgaaattttagcaaaaaaaagtcttttatgaaaacatgagatttctt 36479249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 11090435 - 11090510
Alignment:
Q  108 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||| || ||||||| ||||||||||||||||    
T  11090435 tggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattg 11090510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 20021424 - 20021531
Alignment:
Q  68 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagc-atgaaaaagtctttcatgaaaacat 166  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||| ||||||||| || |||||||||| | |  ||||| ||||||||||| ||||    
T  20021424 attcaaattttaaaggattgtttaataaattagattttgctggattttatgggattttttaatgaaattttaacaaaaaaaaaatctttcatgaagacat 20021523  T
Q  167 aagatttc 174  Q
    ||||||||    
T  20021524 aagatttc 20021531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 49834993 - 49834890
Alignment:
Q  3 aaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagat 102  Q
    |||| |||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |||    
T  49834993 aaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggat 49834894  T
Q  103 tttg 106  Q
    ||||    
T  49834893 tttg 49834890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 158
Target Start/End: Complemental strand, 49501687 - 49501546
Alignment:
Q  7 tcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 106  Q
    ||||| ||||||||||||||||| || |||||||       |||| |||  |||||||||||||||||||||||| |||||||||||||||             
T  49501687 tcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaat--------- 49501597  T
Q  107 atggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 158  Q
     |||||||||||| ||||| ||||| ||||||| || |||||||||||||||    
T  49501596 -tggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcat 49501546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 158
Target Start/End: Complemental strand, 49507752 - 49507611
Alignment:
Q  7 tcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 106  Q
    ||||| ||||||||||||||||| || |||||||       |||| |||  |||||||||||||||||||||||| |||||||||||||||             
T  49507752 tcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaat--------- 49507662  T
Q  107 atggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat 158  Q
     |||||||||||| ||||| ||||| ||||||| || |||||||||||||||    
T  49507661 -tggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcat 49507611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 48 - 173
Target Start/End: Original strand, 5800049 - 5800164
Alignment:
Q  48 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 147  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||          ||||||||||| |||||| ||| | ||||||| || ||||    
T  5800049 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat----------tggattttgtgagattttgtagagtaattttaacaagaaa 5800138  T
Q  148 aagtctttcatgaaaacataagattt 173  Q
    |||||||| ||||||| |||||||||    
T  5800139 aagtctttaatgaaaagataagattt 5800164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 41581905 - 41581795
Alignment:
Q  66 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatg-aaaaagtctttcatgaaaac 164  Q
    |||||||||||| |||  ||||||||||||||  ||||  |||  ||||||||||||||||||||||||||||| |||| ||||| | ||||||| ||||    
T  41581905 tcattcaaattttgaataattgtttaataaattggatt--gatatattttgtgggattttctagtgaaattttaacatgaaaaaaatatttcatgtaaac 41581808  T
Q  165 ataagatttctta 177  Q
    || ||||||||||    
T  41581807 atgagatttctta 41581795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 32684169 - 32684065
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||| ||| ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  32684169 aaaaagtattgaggtattcaatcaagacttttcatca-tttaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 32684071  T
Q  101 attttg 106  Q
    ||||||    
T  32684070 attttg 32684065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 50018275 - 50018391
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||| ||||||||| ||  ||| ||       |||| ||| ||||||| ||||||||||||| |||||||||||||||||||       
T  50018275 aaaaagtcttgaggtattccatcaagacttttcttcatttaaaaaaagtcttgtggtattcaagatcattcaaattttgaaggattgtttaataaattga 50018374  T
Q  101 attttgatggattttgt 117  Q
    ||||| |||||||||||    
T  50018375 attttaatggattttgt 50018391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 12193135 - 12193227
Alignment:
Q  83 gattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttct 175  Q
    ||||||||||||| |   |||||| |||||||||||||| | | ||||||| ||| ||||| ||||| |||| ||| |||||| |||||||||    
T  12193135 gattgtttaataagttgaattttggtggattttgtgggaatatttagtgaattttcagcataaaaaaatcttacattaaaacacaagatttct 12193227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 1044750 - 1044781
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  1044750 aaaaagtcttgtggtattcaatcaagactctt 1044781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 5441386 - 5441417
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  5441386 aaaaagtcttgtggtattcaatcaagactctt 5441417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 9163058 - 9163089
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  9163058 aaaaagtcttgtggtattcaatcaagactctt 9163089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 12913163 - 12913194
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  12913163 aaaaagtcttgtggtattcaatcaagactctt 12913194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 23464895 - 23464926
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  23464895 aaaaagtcttgtggtattcaatcaagactctt 23464926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 24131238 - 24131207
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  24131238 aaaaagtcttgtggtattcaatcaagactctt 24131207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 25331071 - 25331102
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  25331071 aaaaagtcttgtggtattcaatcaagactctt 25331102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 25504905 - 25504874
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  25504905 aaaaagtcttgtggtattcaatcaagactctt 25504874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 27768038 - 27768069
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  27768038 aaaaagtcttgtggtattcaatcaagactctt 27768069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 28541638 - 28541669
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  28541638 aaaaagtcttgtggtattcaatcaagactctt 28541669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 30967523 - 30967492
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  30967523 aaaaagtcttgtggtattcaatcaagactctt 30967492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 32951102 - 32951071
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  32951102 aaaaagtcttgtggtattcaatcaagactctt 32951071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 34228848 - 34228817
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  34228848 aaaaagtcttgtggtattcaatcaagactctt 34228817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 36728023 - 36727972
Alignment:
Q  109 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatga 160  Q
    ||||||||| ||||||| ||||||||||||| || |||||| ||||||||||    
T  36728023 ggattttgtaggattttttagtgaaattttaacaagaaaaaatctttcatga 36727972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 37046718 - 37046687
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  37046718 aaaaagtcttgtggtattcaatcaagactctt 37046687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 39479623 - 39479592
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  39479623 aaaaagtcttgtggtattcaatcaagactctt 39479592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 41320802 - 41320833
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  41320802 aaaaagtcttgtggtattcaatcaagactctt 41320833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 41881349 - 41881318
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  41881349 aaaaagtcttgtggtattcaatcaagactctt 41881318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 46635908 - 46635877
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  46635908 aaaaagtcttgtggtattcaatcaagactctt 46635877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 49835037 - 49835006
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  49835037 aaaaagtcttgtggtattcaatcaagactctt 49835006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 54853692 - 54853661
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  54853692 aaaaagtcttgtggtattcaatcaagactctt 54853661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 32684072 - 32684018
Alignment:
Q  119 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagattt 173  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| || ||||||    
T  32684072 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 32684018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 37915809 - 37915839
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactct 31  Q
    |||||||||||||||||||||||||||||||    
T  37915809 aaaaagtcttgtggtattcaatcaagactct 37915839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 5441344 - 5441372
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  5441344 aaaaagtcttgtggtattcaatcaagact 5441372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 28100615 - 28100587
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  28100615 aaaaagtcttgtggtattcaatcaagact 28100587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 30967565 - 30967537
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  30967565 aaaaagtcttgtggtattcaatcaagact 30967537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 37828668 - 37828640
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  37828668 aaaaagtcttgtggtattcaatcaagact 37828640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 37915725 - 37915753
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  37915725 aaaaagtcttgtggtattcaatcaagact 37915753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 37915767 - 37915795
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  37915767 aaaaagtcttgtggtattcaatcaagact 37915795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 50018191 - 50018219
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  50018191 aaaaagtcttgtggtattcaatcaagact 50018219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 54341084 - 54341112
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  54341084 aaaaagtcttgtggtattcaatcaagact 54341112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 54853734 - 54853706
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  54853734 aaaaagtcttgtggtattcaatcaagact 54853706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 2e-83; HSPs: 97)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 10139328 - 10139122
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10139328 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 10139229  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||||||    
T  10139228 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagat 10139129  T
Q  201 tttacta 207  Q
    |||||||    
T  10139128 tttacta 10139122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 20498233 - 20498439
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20498233 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 20498332  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||||||    
T  20498333 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagat 20498432  T
Q  201 tttacta 207  Q
    |||||||    
T  20498433 tttacta 20498439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 996268 - 996062
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||| ||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  996268 aaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 996169  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||||||    
T  996168 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagat 996069  T
Q  201 tttacta 207  Q
    |||||||    
T  996068 tttacta 996062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 19253851 - 19254033
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  19253851 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaataag 19253950  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19253951 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 19254033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 3206387 - 3206181
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3206387 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 3206288  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||       ||||||||||    
T  3206287 attttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttatgattgtttttttcttttaagat 3206188  T
Q  201 tttacta 207  Q
    |||||||    
T  3206187 tttacta 3206181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 33807981 - 33807798
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatca 99  Q
    ||||||||||||||||||||||||||||||||||||||||        |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33807981 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatca 33807882  T
Q  100 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33807881 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 33807798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 3999827 - 3999645
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3999827 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 3999728  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  3999727 attttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaaaacatgagatttcttaggattg 3999645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 6589588 - 6589770
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||| ||       |||||||| |||||||||||||||||||||||||| ||| |||||||||||||    
T  6589588 aaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaagaattatttaataaatcag 6589687  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6589688 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 6589770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 29449040 - 29448858
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29449040 aaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 29448941  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  29448940 attttgatggattttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaaaacatgagatttcttaggattg 29448858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 37820659 - 37820453
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||| ||||||||||||||||||||| ||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  37820659 aaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 37820560  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||       ||||||||||    
T  37820559 attttgatggattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaagattgtttttttcttttaagat 37820460  T
Q  201 tttacta 207  Q
    |||||||    
T  37820459 tttacta 37820453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 54625616 - 54625798
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||| |||||| |||||||||||||||||||||||||||       |||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  54625616 aaaaaatcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaatcag 54625715  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||    
T  54625716 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtttttcatgaaaacatgagatttcttaagattg 54625798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 35337759 - 35337963
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  35337759 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaaaattcaaatttcgaaggattgtttaataaatcag 35337858  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||       ||||||||||    
T  35337859 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt-tttcatgaaaacatgagattt-ttaggattgtttttttcttttaagat 35337956  T
Q  201 tttacta 207  Q
    |||||||    
T  35337957 tttacta 35337963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 33996723 - 33996547
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||        || |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33996723 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 33996624  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctta 177  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||    
T  33996623 attttgatggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgagatttctta 33996547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 40246868 - 40247050
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||| ||||||||||||||||||||| ||||||| ||       |||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  40246868 aaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcag 40246967  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||| |||||    
T  40246968 attttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttatgattg 40247050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 25418390 - 25418572
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||| ||||||||||        ||||| | |||||||||||||||||||||  |||||||||||||||||||||    
T  25418390 aaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattcaaaatcattcaaatttgaaaggattgtttaataaatcag 25418489  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||| ||||||||||    
T  25418490 attttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaaaacatgagattccttaggattg 25418572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 44762219 - 44762037
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||| ||| |||||||||||||||||||||||||||       |||||||| |||| ||||| |||||| ||||||||||||||||||||||||||    
T  44762219 aaaaagtcatgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatttaaaattattcaagtttcgaaggattgtttaataaatcag 44762120  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||    
T  44762119 attttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaagattg 44762037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 53929310 - 53929128
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| |||||||||||||| |||| ||||| ||||||||||||||| ||    
T  53929310 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatatcgaacgattgtttaataaataag 53929211  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||| |||||| |||||||||    
T  53929210 attttgatggattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagattttttaggattg 53929128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 6035235 - 6035053
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||| | |||||||||||| ||    
T  6035235 aaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcgaagcaatgtttaataaattag 6035136  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  6035135 attttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaagattg 6035053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 52114552 - 52114734
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatca 99  Q
    ||||||||||||||||||||||||||||| ||||||||||        |||||||| |||||||||| |||||||||||| |||||||||||||||||||    
T  52114552 aaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaaaataattcaaatttcgcaggattgtttaataaatca 52114651  T
Q  100 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggatt 182  Q
    ||||||||| |||||||||| |||||||||| |||||||||||||||||| |||||  ||||||||| |||||||||||||||    
T  52114652 gattttgatagattttgtggaattttctagtaaaattttagcatgaaaaaatcttttgtgaaaacatgagatttcttaggatt 52114734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 51699661 - 51699497
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||| ||||||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||||||||| ||||||||| ||    
T  51699661 aaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaa-tctagtggtattcaaaatcattcaaatttcgaaggattggttaataaataag 51699563  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 166  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  51699562 attttgatgaattttgtgggattttctagtgaaattttagcatgaaaaaatctttcgtgaaaacat 51699497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 17946312 - 17946487
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||| ||||||||||||||||||  |    
T  17946312 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaatttcaaaggattgtttaataaattgg 17946411  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  17946412 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 17946487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 40897168 - 40897343
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       ||||  || |||||||||||||||||||||||||||||||||||||||||  |    
T  40897168 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 40897267  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  40897268 attttgatggattttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 40897343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 29030030 - 29030203
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||| ||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  29030030 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaa-gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcag 29030128  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttct 175  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||||    | ||| |||||||||| ||||||||    
T  29030129 attttgatggattttgtggaattttctaatgaaattttaacatgaattttttttttatgaaaacatgagatttct 29030203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 18749636 - 18749811
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| |||||||||| || ||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  18749636 aaaaagtcttgaggtattcaataaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 18749735  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  18749736 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 18749811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 36674312 - 36674137
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| ||||||||||||||||||||| |||||||||||||||||||  |    
T  36674312 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattgg 36674213  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  36674212 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 36674137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 44906695 - 44906520
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  44906695 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 44906596  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||| ||||||||||||||| ||||| ||||||| || ||||| |||||||||||||| || |||||||||    
T  44906595 attttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaaagatgagatttctt 44906520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 1440134 - 1440006
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||| ||||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  1440134 aaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttccaaggattgtttaataaatcag 1440035  T
Q  101 attttgatggattttgtgggattttctag 129  Q
    ||||||||||||||| |||||||||||||    
T  1440034 attttgatggattttatgggattttctag 1440006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 8 - 148
Target Start/End: Original strand, 22057793 - 22057933
Alignment:
Q  8 cttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttga 107  Q
    |||||||||||| |||||||||||| |||||||        ||||||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  22057793 cttgtggtattccatcaagactcttgatcacttaaaaaaaatctagtggtatttaaaatcattcaaatttcgatggattgtttaataaatcagattttga 22057892  T
Q  108 tggattttgtgggattttctagtgaaattttagcatgaaaa 148  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  22057893 tggattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 51737908 - 51737740
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  51737908 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 51737809  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataag 169  Q
    ||||||||||||||||||||||||| | ||| ||||||| || ||||||||||||||| |||| |||||    
T  51737808 attttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtctttcataaaaagataag 51737740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 57 - 183
Target Start/End: Original strand, 5825142 - 5825268
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 156  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||||||||| |||||||||||||||| |||||||||| ||||||||||||| |||||    
T  5825142 tattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggctttc 5825241  T
Q  157 atgaaaacataagatttcttaggattg 183  Q
    |||||||||| |||||||||| |||||    
T  5825242 atgaaaacatgagatttcttatgattg 5825268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 11431550 - 11431725
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||| ||||||||||||||||||||||||||  |    
T  11431550 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattgg 11431649  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    |||||| |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  11431650 attttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 11431725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 34484212 - 34484037
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       || | ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  34484212 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 34484113  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| || |||||||||    
T  34484112 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 34484037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 26107285 - 26107460
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  26107285 aaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 26107384  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    |||||||||||||||||| |||||| ||||| ||||||| || |||||||| |||||| |||| || |||||||||    
T  26107385 attttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaaaagatgagatttctt 26107460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 32580201 - 32580375
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| |||||||||| |||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  32580201 aaaaagtcttgaggtattcaat-aagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 32580299  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    |||||||||||||||| |||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  32580300 attttgatggattttgagggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 32580375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 48379181 - 48379356
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||| ||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||       
T  48379181 aaaaagtcttgaggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattga 48379280  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| |||||||  | ||||| |||||||||||||| || |||||||||    
T  48379281 attttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaaaagatcagatttctt 48379356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 95 - 183
Target Start/End: Complemental strand, 6131321 - 6131233
Alignment:
Q  95 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6131321 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 6131233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 27899368 - 27899540
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||| | |||||||||||||||||||||  ||| ||       |||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27899368 aaaaagtcatatggtattcaatcaagactctttgtcatttaaaaaaagtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 27899467  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||||          | |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||    
T  27899468 attttg----------taggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttatgattg 27899540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 52618147 - 52618009
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  52618147 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 52618048  T
Q  101 attttgatggattttgtgggattttctagtgaaatttta 139  Q
    ||||||||||||||||||||||||| ||||| |||||||    
T  52618047 attttgatggattttgtgggattttgtagtgtaatttta 52618009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 57 - 176
Target Start/End: Original strand, 54628924 - 54629043
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 156  Q
    |||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||    
T  54628924 tattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 54629023  T
Q  157 atgaaaacataagatttctt 176  Q
    || |||| || |||||||||    
T  54629024 ataaaaagatgagatttctt 54629043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 20833016 - 20833187
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||| | || |||||||       |||| ||| ||||||||||||||||||||  |||||||||||||||||||  |    
T  20833016 aaaaagtcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattcggaaggattgtttaataaattgg 20833115  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatt 172  Q
    |||||||||||||||||| |||||  ||||| ||||||| || |||||||| ||||||||||| ||||||||    
T  20833116 attttgatggattttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaagataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 31646466 - 31646304
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||  |||||||||||||||| || |||| ||        ||| ||| ||||||||||||||||||||||||| ||||||||||| |||  |    
T  31646466 aaaaagtcttgacgtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaaagattgtttaatgaattgg 31646367  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 163  Q
    ||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  31646366 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 31646304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 72 - 183
Target Start/End: Complemental strand, 1440005 - 1439894
Alignment:
Q  72 aaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagat 171  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||| | |||||||||||||||| |||||||| ||||    
T  1440005 aaatttggaaggattgtttaataaattagattttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagat 1439906  T
Q  172 ttcttaggattg 183  Q
    || |||||||||    
T  1439905 tttttaggattg 1439894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 52810402 - 52810577
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||| ||| ||||||||||||||||| || |||| ||       |||| ||| ||||||||||||||||||||| ||| |||||||||||||||       
T  52810402 aaaaagttttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaatgattgtttaataaattga 52810501  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||| | ||||||| || |||||| ||||||||||||| || |||||||||    
T  52810502 attttgatggattttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 52810577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 50903375 - 50903247
Alignment:
Q  48 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 147  Q
    |||| ||| ||||||||||||||||||||  |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  50903375 gtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 50903276  T
Q  148 aagtctttcatgaaaacataagatttctt 176  Q
    || ||||| ||||||| || |||||||||    
T  50903275 aaatcttttatgaaaatatgagatttctt 50903247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 55235261 - 55235359
Alignment:
Q  54 tgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgga-ttttgtgggattttctagtgaaattttagcatgaaaaagt 151  Q
    |||||||||||||||||||||||||||| |||||||||||||||  | |||||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  55235261 tgatattcaaaatcattcaaatttcgaaagattgtttaataaattggtttttgatggatttttgtgggattttctaatgaaattttagcataaaaaagt 55235359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 10728823 - 10728658
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| |||| |||||||||||||||| |||||||||||||||||||  |    
T  10728823 aaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaaaatcattcaaatttggaaggattgtttaataaattgg 10728724  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||          ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  10728723 attttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 10728658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 183
Target Start/End: Original strand, 52079999 - 52080117
Alignment:
Q  49 tctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaa 148  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||          ||||||||||||||||||| |||||||||||||||||||    
T  52079999 tctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatca----------gattttgtgggattttctaatgaaattttagcatgaaaa 52080088  T
Q  149 agtctttcatgaaaacataagatttcttaggattg 183  Q
    |||      ||||||||| ||||||||||||||||    
T  52080089 agt------tgaaaacatgagatttcttaggattg 52080117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 10660559 - 10660675
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       || | ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  10660559 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtattgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 10660658  T
Q  101 attttgatggattttgt 117  Q
    |||||||||||||||||    
T  10660659 attttgatggattttgt 10660675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 39038064 - 39038229
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| ||| |||||||||||||||||||||| ||||||||||||||  |    
T  39038064 aaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaatcattcaaatttcgaagaattgtttaataaattgg 39038163  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    |||||||||||||||||          |||| ||||||| || ||||||||||||||| |||| || |||||||||    
T  39038164 attttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcataaaaagatgagatttctt 39038229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 183
Target Start/End: Complemental strand, 39842619 - 39842494
Alignment:
Q  48 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 147  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||          || || ||||||| || ||||    
T  39842619 gtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttg----------taatgtaattttaacaagaaa 39842530  T
Q  148 aagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||| || ||||||||| ||||||    
T  39842529 aagtctttcatgaaaagatgagatttcttgggattg 39842494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 37454885 - 37455050
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| | ||||||||||||||| || |||| ||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||       
T  37454885 aaaaagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaat--- 37454981  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
           || ||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| || |||||||||    
T  37454982 -------tgaattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttctt 37455050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 23753568 - 23753463
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  23753568 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 23753469  T
Q  101 attttg 106  Q
    ||||||    
T  23753468 attttg 23753463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 44276413 - 44276580
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||| | || |||||||       ||||  || ||||||||||||||||||||    |||||||||||||||||       
T  44276413 aaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaatt----aggattgtttaataaat--- 44276505  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggatt 182  Q
           |||||||||||||||||||||||||||||||| || |||||| ||||||||||| |||| |||||| || |||||    
T  44276506 -------tggattttgtgggattttctagtgaaattttaacaagaaaaaatctttcatgaagacatgagattttttgggatt 44276580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 6975772 - 6975924
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||| ||| |||| |||||       
T  6975772 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaa--gtcttgtggtattcaaaatcattcaaatttcgaagaattatttactaaat--- 6975866  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 165  Q
           |||| |||||||||||||||||| |||||| ||||||||| |||||||||||||||||    
T  6975867 -------tggaatttgtgggattttctagtaaaatttgagcatgaaacagtctttcatgaaaaca 6975924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 539586 - 539476
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||| | || |||| ||       |||| ||| |||||||||||||||||||||||||||||| ||||||||||  |    
T  539586 aaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 539487  T
Q  101 attttgatgga 111  Q
    |||||||||||    
T  539486 attttgatgga 539476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 33807733 - 33807680
Alignment:
Q  130 tgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33807733 tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 33807680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 176
Target Start/End: Complemental strand, 50762185 - 50762067
Alignment:
Q  48 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 147  Q
    |||| ||| ||||||||||||||| ||||||||| |||||||| ||||||  |||||||||||||||||          ||||| ||||||| || ||||    
T  50762185 gtcttgtggtattcaaaatcattctaatttcgaatgattgtttgataaattggattttgatggattttg----------tagtgtaattttaacaagaaa 50762096  T
Q  148 aagtctttcatgaaaacataagatttctt 176  Q
    |||||||||||||||| || |||||||||    
T  50762095 aagtctttcatgaaaagatgagatttctt 50762067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 15492942 - 15492874
Alignment:
Q  108 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    |||||||||| |||| |||||||||||||||| || |||||| |||||||||||  |||||||||||||    
T  15492942 tggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttctt 15492874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 23535984 - 23535890
Alignment:
Q  9 ttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattt 104  Q
    |||||| |||||||||| |||||| |||||||       |||| ||| ||||||||||||||||||||| ||||||| ||||||| ||| ||||||    
T  23535984 ttgtggcattcaatcaa-actcttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 45862983 - 45863040
Alignment:
Q  119 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 45863040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 6131353 - 6131317
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatca 37  Q
    ||||||| |||||||||||||||||||||||||||||    
T  6131353 aaaaagttttgtggtattcaatcaagactcttaatca 6131317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 51737951 - 51737915
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatca 37  Q
    |||||||||||||||||||||||||||||||| ||||    
T  51737951 aaaaagtcttgtggtattcaatcaagactctttatca 51737915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 996351 - 996320
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  996351 aaaaagtcttgtggtattcaatcaagactctt 996320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 3206462 - 3206431
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  3206462 aaaaagtcttgtggtattcaatcaagactctt 3206431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 6975731 - 6975762
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  6975731 aaaaagtcttgtggtattcaatcaagactctt 6975762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 10139412 - 10139381
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  10139412 aaaaagtcttgtggtattcaatcaagactctt 10139381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 10660517 - 10660548
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  10660517 aaaaagtcttgtggtattcaatcaagactctt 10660548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 10728865 - 10728834
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  10728865 aaaaagtcttgtggtattcaatcaagactctt 10728834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 18749552 - 18749583
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  18749552 aaaaagtcttgtggtattcaatcaagactctt 18749583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 19253767 - 19253798
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  19253767 aaaaagtcttgtggtattcaatcaagactctt 19253798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 20498149 - 20498180
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  20498149 aaaaagtcttgtggtattcaatcaagactctt 20498180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 27240467 - 27240436
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  27240467 aaaaagtcttgtggtattcaatcaagactctt 27240436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 34484254 - 34484223
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  34484254 aaaaagtcttgtggtattcaatcaagactctt 34484223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 35337675 - 35337706
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  35337675 aaaaagtcttgtggtattcaatcaagactctt 35337706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 36674354 - 36674323
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  36674354 aaaaagtcttgtggtattcaatcaagactctt 36674323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 37820743 - 37820712
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  37820743 aaaaagtcttgtggtattcaatcaagactctt 37820712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 40246784 - 40246815
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  40246784 aaaaagtcttgtggtattcaatcaagactctt 40246815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 44762303 - 44762272
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  44762303 aaaaagtcttgtggtattcaatcaagactctt 44762272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 44906737 - 44906706
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  44906737 aaaaagtcttgtggtattcaatcaagactctt 44906706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 50762274 - 50762243
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  50762274 aaaaagtcttgtggtattcaatcaagactctt 50762243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 50903467 - 50903436
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  50903467 aaaaagtcttgtggtattcaatcaagactctt 50903436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 54628825 - 54628856
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  54628825 aaaaagtcttgtggtattcaatcaagactctt 54628856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 12103733 - 12103779
Alignment:
Q  120 gattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 166  Q
    |||||||||||||||||||| || ||| |||||||||||||| ||||    
T  12103733 gattttctagtgaaattttaacaagaataagtctttcatgaagacat 12103779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 12734106 - 12734076
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactct 31  Q
    |||||||||||||||||||||||||||||||    
T  12734106 aaaaagtcttgtggtattcaatcaagactct 12734076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 1440218 - 1440190
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  1440218 aaaaagtcttgtggtattcaatcaagact 1440190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 2024147 - 2024175
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  2024147 aaaaagtcttgtggtattcaatcaagact 2024175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 10216194 - 10216166
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  10216194 aaaaagtcttgtggtattcaatcaagact 10216166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 10225702 - 10225674
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  10225702 aaaaagtcttgtggtattcaatcaagact 10225674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 10660475 - 10660503
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  10660475 aaaaagtcttgtggtattcaatcaagact 10660503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 11431466 - 11431494
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  11431466 aaaaagtcttgtggtattcaatcaagact 11431494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 18749510 - 18749538
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  18749510 aaaaagtcttgtggtattcaatcaagact 18749538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 23753652 - 23753624
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  23753652 aaaaagtcttgtggtattcaatcaagact 23753624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 27240509 - 27240481
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  27240509 aaaaagtcttgtggtattcaatcaagact 27240481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 31646550 - 31646522
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  31646550 aaaaagtcttgtggtattcaatcaagact 31646522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 36674396 - 36674368
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  36674396 aaaaagtcttgtggtattcaatcaagact 36674368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 44906779 - 44906751
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  44906779 aaaaagtcttgtggtattcaatcaagact 44906751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 50903509 - 50903481
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  50903509 aaaaagtcttgtggtattcaatcaagact 50903481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 9e-82; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 21147092 - 21147274
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21147092 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 21147191  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21147192 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 21147274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 7016920 - 7016714
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||| |||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7016920 aaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 7016821  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||       ||||||||||    
T  7016820 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttagaattgtttttttcttttaagat 7016721  T
Q  201 tttacta 207  Q
    |||||||    
T  7016720 tttacta 7016714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 33656222 - 33656040
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||        |||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  33656222 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 33656123  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  33656122 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaggattg 33656040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 5273100 - 5272924
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||| |||||||||||||||||||||||||| ||       |||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  5273100 aaaaagtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcag 5273001  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctta 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  5273000 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttctta 5272924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 849172 - 849334
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       ||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  849172 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 849271  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 163  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  849272 attttgatagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 27459130 - 27458925
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||| |||||||||||||||||||||||||||       |||||||| |||||||||||||||| |||| ||||||||||||||||||| ||    
T  27459130 aaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaa-gtctagtggtattcaaaatcattcagattttgaaggattgtttaataaattag 27459032  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| | ||||||||||||||       ||||||||||    
T  27459031 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatcattcatgaaaacatgatatttcttaggattgtttttttcttttaagat 27458932  T
Q  201 tttacta 207  Q
    |||||||    
T  27458931 tttacta 27458925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 139298 - 139474
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||| |||||||||||||||||||| ||||||||||       |||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  139298 aaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaaccag 139397  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctta 177  Q
    ||||||||||||||||| |||||||| ||||||||||||  ||||||||||||||||| ||||||| ||||||||||    
T  139398 attttgatggattttgttggattttccagtgaaattttaatatgaaaaagtctttcataaaaacatgagatttctta 139474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 32158079 - 32157869
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatca 99  Q
    |||||||||||||||||||||||||||| | |||||||||        |||||||| ||||||||||||||||||||||||||||||||||||||||| |    
T  32158079 aaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatta 32157980  T
Q  100 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaa---agtctttcatgaaaacataagatttcttaggattgnnnnnnnctttta 196  Q
    |||||||| |||||||||||||||||||||| ||||||||||| |||||   |||||||||||||||||| ||||||||||  ||||       ||||||    
T  32157979 gattttgacggattttgtgggattttctagtaaaattttagcacgaaaaaatagtctttcatgaaaacatgagatttcttaaaattgttcttttctttta 32157880  T
Q  197 agattttacta 207  Q
    |||||||||||    
T  32157879 agattttacta 32157869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 1152284 - 1152102
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||| ||||||||||||||||  |    
T  1152284 aaaaagtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgagggattgtttaataaattgg 1152185  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||| ||||||| || |||||||||| |||||    
T  1152184 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagatttcttaagattg 1152102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 6460817 - 6460965
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||| ||| |||||||||||||||||||||||| ||        ||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  6460817 aaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaaggtttgtttaataaatcag 6460916  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 149  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||    
T  6460917 attttgatggattttgagggattttctagtgaaattttatcatgaaaaa 6460965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 7947754 - 7947579
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| | |||||||||||||||||||||||||||||||||||||||||||  |    
T  7947754 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaatttcgaaggattgtttaataaattgg 7947655  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| |  |||||||||    
T  7947654 attttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagaagagatttctt 7947579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 14000286 - 14000111
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| ||||||||||||||||||||| |||||||||||||||||||  |    
T  14000286 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattgg 14000187  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  14000186 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 14000111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 13925956 - 13926131
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||| | || || ||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  13925956 aaaaagtcttgaggtattcaatcaagatttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 13926055  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||| ||||| || | |||||||    
T  13926056 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgatatttctt 13926131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 173
Target Start/End: Complemental strand, 4550436 - 4550266
Alignment:
Q  3 aaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagat 102  Q
    |||| |||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |||    
T  4550436 aaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggat 4550337  T
Q  103 tttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagattt 173  Q
    ||||||||||||||||| ||||| ||||| ||||||| || |||| ||||||||||||||| || ||||||    
T  4550336 tttgatggattttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaaaagatgagattt 4550266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 176
Target Start/End: Original strand, 39852372 - 39852545
Alignment:
Q  3 aaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagat 102  Q
    ||||||||| |||||||||||||||||  | |||| ||       |||| ||| ||||||||||||||||||||||||||||||||||| |||||  |||    
T  39852372 aaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggat 39852471  T
Q  103 tttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||| ||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  39852472 tttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 39852545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 9689693 - 9689864
Alignment:
Q  11 gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgg 110  Q
    |||||||||||||||||||||| |||||||       |||| ||| |||| ||||||||| |||||||||| |||||||| |||||| ||||||||||||    
T  9689693 gtggtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatttaaaatcatt-aaatttcgaatgattgtttgataaattagattttgatgg 9689791  T
Q  111 attttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||| |||| |||||||| || ||||||||  ||||||||||||||||| |||||||||||||||||| |||||    
T  9689792 attgtgtgagattttcttgtaaaattttattatgaaaaagtctttcataaaaacataagatttcttatgattg 9689864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 14465408 - 14465266
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||| || ||||||||||||||||||||| ||| |||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||| |    
T  14465408 aaaaagttttctggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcgg 14465309  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcat 143  Q
    ||||||||| ||||||||| |||||||||| | ||||||||||    
T  14465308 attttgatgaattttgtggaattttctagtaatattttagcat 14465266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 22746322 - 22746496
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||| ||| || |||||||       |||| ||||||||||||||||||||||||||||| |||||||||||||||       
T  22746322 aaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaatgattgtttaataaattga 22746421  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||        || ||||||| || |||||| ||||||||||||| ||||||||||||| |||||    
T  22746422 attttgatggattttgtggga--------tgtaattttaacaagaaaaactctttcatgaaaagataagatttcttaagattg 22746496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 4240633 - 4240517
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  4240633 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 4240534  T
Q  101 attttgatggattttgt 117  Q
    |||||||||||||||||    
T  4240533 attttgatggattttgt 4240517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1461319 - 1461203
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| | | |||||||||||||||||||||||||||||||||||||||||  |    
T  1461319 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattcaaaatcattcaaatttcgaaggattgtttaataaattgg 1461220  T
Q  101 attttgatggattttgt 117  Q
    |||||||||||||||||    
T  1461219 attttgatggattttgt 1461203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 9220888 - 9220716
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||| |||||||||||||||||| |||||||       ||||  ||||||||||||||||||||||||| |||||||||||||| ||| ||    
T  9220888 aaaaagtcttgtgatattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattcaaatttctaaggattgtttaatgaattag 9220789  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    | ||||          | ||||||| |||| |||||||| || ||||||||||||| ||||||||| | ||||||||||||||    
T  9220788 aatttg----------taggattttatagtaaaattttaacacgaaaaagtctttcgtgaaaacatgatatttcttaggattg 9220716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 57 - 176
Target Start/End: Original strand, 5949189 - 5949298
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 156  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||||||||||    
T  5949189 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttc 5949278  T
Q  157 atgaaaacataagatttctt 176  Q
    ||||||| || |||||||||    
T  5949279 atgaaaagatgagatttctt 5949298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 40013883 - 40013718
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||        ||| ||| ||||||||||||||||||||||||||||||||||||| |||  |    
T  40013883 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtgttattcaaaatcattcaaatttcgaaggattgtttaatcaattgg 40013784  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||| ||||||||||          ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  40013783 attttaatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 40013718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 37013939 - 37014044
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| | | ||||||||||||||||||||||||||| |||||||||||||  |    
T  37013939 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtattcaaaatcattcaaatttcgaagggttgtttaataaattgg 37014038  T
Q  101 attttg 106  Q
    ||||||    
T  37014039 attttg 37014044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 16894083 - 16894044
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcactt 40  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16894083 aaaaagtcttgtggtattcaatcaagactcttaatcactt 16894044  T

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Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 1511426 - 1511349
Alignment:
Q  108 tggattttgtgggattttct-agtgaaattttagcatgaaaaag-tctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||| | |||||  |||| ||||||||||  ||||| ||||||||||||||||| |||||||||    
T  1511426 tggattttgtgggatttttttagtgagtttttggcatgaaaaaaatcttttatgaaaacataagattttttaggattg 1511349  T

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Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 1152326 - 1152295
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  1152326 aaaaagtcttgtggtattcaatcaagactctt 1152295  T

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Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 4550480 - 4550449
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  4550480 aaaaagtcttgtggtattcaatcaagactctt 4550449  T

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Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 5949092 - 5949123
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  5949092 aaaaagtcttgtggtattcaatcaagactctt 5949123  T

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Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 6460733 - 6460764
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  6460733 aaaaagtcttgtggtattcaatcaagactctt 6460764  T

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Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 7016962 - 7016931
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  7016962 aaaaagtcttgtggtattcaatcaagactctt 7016931  T

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Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 9689601 - 9689632
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  9689601 aaaaagtcttgtggtattcaatcaagactctt 9689632  T

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Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 32158164 - 32158133
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  32158164 aaaaagtcttgtggtattcaatcaagactctt 32158133  T

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Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 33656308 - 33656277
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  33656308 aaaaagtcttgtggtattcaatcaagactctt 33656277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 37013897 - 37013928
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  37013897 aaaaagtcttgtggtattcaatcaagactctt 37013928  T

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Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 40013925 - 40013894
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  40013925 aaaaagtcttgtggtattcaatcaagactctt 40013894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 43319188 - 43319218
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactct 31  Q
    |||||||||||||||||||||||||||||||    
T  43319188 aaaaagtcttgtggtattcaatcaagactct 43319218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 4550522 - 4550494
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  4550522 aaaaagtcttgtggtattcaatcaagact 4550494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 14000370 - 14000342
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  14000370 aaaaagtcttgtggtattcaatcaagact 14000342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 26806609 - 26806581
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  26806609 aaaaagtcttgtggtattcaatcaagact 26806581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 37013855 - 37013883
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  37013855 aaaaagtcttgtggtattcaatcaagact 37013883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 154; Significance: 9e-82; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 24776381 - 24776563
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24776381 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 24776480  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24776481 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 24776563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 16269717 - 16269923
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  16269717 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 16269816  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||||||    
T  16269817 attttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagat 16269916  T
Q  201 tttacta 207  Q
    |||||||    
T  16269917 tttacta 16269923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 20605262 - 20605468
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  20605262 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcgaaggattgtttaataaatcag 20605361  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||||||    
T  20605362 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagat 20605461  T
Q  201 tttacta 207  Q
    |||||||    
T  20605462 tttacta 20605468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 31170808 - 31170602
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  31170808 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttccaaggattgtttaataaatcag 31170709  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||||||    
T  31170708 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagat 31170609  T
Q  201 tttacta 207  Q
    |||||||    
T  31170608 tttacta 31170602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 14198761 - 14198555
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       ||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14198761 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 14198662  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||       ||||||||||    
T  14198661 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttcttaggattgtttttttcttttaagat 14198562  T
Q  201 tttacta 207  Q
    |||||||    
T  14198561 tttacta 14198555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 12407406 - 12407612
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||| ||||||||||||||||       |||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  12407406 aaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatcag 12407505  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||       ||||||||||    
T  12407506 attttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagat 12407605  T
Q  201 tttacta 207  Q
    |||||||    
T  12407606 tttacta 12407612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 35317088 - 35317294
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||  ||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35317088 aaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 35317187  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||       ||||||||||    
T  35317188 attttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaacattgtttttttcttttaagat 35317287  T
Q  201 tttacta 207  Q
    |||||||    
T  35317288 tttacta 35317294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 43847672 - 43847878
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  43847672 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 43847771  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    | ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||       ||||||||||    
T  43847772 aatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaacatgagatttcttaggattgtttttttcttttaagat 43847871  T
Q  201 tttacta 207  Q
    |||||||    
T  43847872 tttacta 43847878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 305649 - 305443
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||| ||| ||||||||||||||||||    
T  305649 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaattttgaatgattgtttaataaatcag 305550  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||       ||||||||||    
T  305549 atttcgatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttatttcttttaagat 305450  T
Q  201 tttacta 207  Q
    |||||||    
T  305449 tttacta 305443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 5093231 - 5093049
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||||||||||||||||||| |||||||||||       |||||||  ||||||||||||||||||||| ||||||||||||||||||||||    
T  5093231 aaaaagtcttgtggtattcaatcaagacgcttaatcacttaaaaaaagtctagtagtattcaaaatcattcaaattttgaaggattgtttaataaatcag 5093132  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  5093131 attttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattg 5093049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 22551947 - 22551741
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||| ||||||||||       |||||||| |||||||||| |||||||||||||| ||||||||| ||||| |     
T  22551947 aaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaatgattgtttattaaattaa 22551848  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||       ||||||||||    
T  22551847 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaacatgagatttcttatgattgttttttccttttaagat 22551748  T
Q  201 tttacta 207  Q
    |||||||    
T  22551747 tttacta 22551741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 9120152 - 9120358
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||| ||||||||||||| ||||||||||||        |||||||||||||||||||||||| ||||  |||||||||||||||||| ||    
T  9120152 aaaaagtcttgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatcattcagattttaaaggattgtttaataaattag 9120251  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||| ||||||||||||||||       ||||||||||    
T  9120252 attttgatggattttgtgggattttctagtgaaattttagtatggaaaaatctttcatgaaaacatgagatttcttaggattgtttttttcttttaagat 9120351  T
Q  201 tttacta 207  Q
    |||||||    
T  9120352 tttacta 9120358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 1789468 - 1789630
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||| || ||||||||||| ||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1789468 aaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 1789567  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 163  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  1789568 attttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatcaaaa 1789630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 32125276 - 32125455
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaat---cacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 97  Q
    |||||||| ||||||||||||||||||||||||||   || ||       ||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  32125276 aaaaagtcatgtggtattcaatcaagactcttaatgatcatttaaaaaaagtcaagtggtattcaaaatcattcaaatttcgaaggattgtttaataaat 32125375  T
Q  98 cagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctta 177  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||    
T  32125376 cagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaatatgagatttctta 32125455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 44765801 - 44765974
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||| ||||||||||||||||       |||||||| ||||||||||||||||||||||||| ||||||||||||||| ||    
T  44765801 aaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaataag 44765900  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||||||||||||||||         |||||||||||||| ||||||||||||||||    
T  44765901 attttgatggattttgtgggattttctagtgaaattttagcat---------tttcatgaaaacatgagatttcttaggattg 44765974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 28844581 - 28844756
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  28844581 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattag 28844680  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||| ||||| ||||| |||||||  | ||||||||||||||| |||| || |||||||||    
T  28844681 attttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaagatgagatttctt 28844756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 33135649 - 33135823
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  33135649 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 33135748  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| || |||||||||    
T  33135749 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat-aaaaaatgagatttctt 33135823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 10657432 - 10657607
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||| ||| ||||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||  |    
T  10657432 aaaaagttttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattgg 10657531  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| || | |||||||    
T  10657532 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgaaatttctt 10657607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 18177293 - 18177468
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       || | ||| ||||||||||||||||||||||||||||||||||||| |||  |    
T  18177293 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattcaaatttcgaaggattgtttaattaattgg 18177392  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||| || |||| || |||||||||    
T  18177393 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttaataaaaagatgagatttctt 18177468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 25288185 - 25288360
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| |||||||| |||||||| || |||||||        ||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  25288185 aaaaagtcttgaggtattcattcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 25288284  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||| ||||||||||||||| ||||| ||||||| || || || |||||||||||||| || |||||||||    
T  25288285 attttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaagatgagatttctt 25288360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 65 - 176
Target Start/End: Original strand, 43078653 - 43078764
Alignment:
Q  65 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 164  Q
    ||||||||||||||||| |||||||||||||||  |||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||||| ||||     
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  165 ataagatttctt 176  Q
    ||||||||||||    
T  43078753 ataagatttctt 43078764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 48 - 158
Target Start/End: Original strand, 26788859 - 26788969
Alignment:
Q  48 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 147  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||    
T  26788859 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 26788958  T
Q  148 aagtctttcat 158  Q
    |||||||||||    
T  26788959 aagtctttcat 26788969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 28740467 - 28740349
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  28740467 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 28740368  T
Q  101 attttgatggattttgtgg 119  Q
    |||||||||||||||||||    
T  28740367 attttgatggattttgtgg 28740349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 7026630 - 7026746
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  7026630 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 7026729  T
Q  101 attttgatggattttgt 117  Q
    |||||||||||||||||    
T  7026730 attttgatggattttgt 7026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 26601384 - 26601214
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||| |||||||||||||||||||||||||||       |||  ||| ||||||||||||||||||||||||| | ||||||||||||||||    
T  26601384 aaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtattcaaaatcattcaaatttcgaatgtttgtttaataaatcag 26601285  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||          |||||||||||||||||||||| |||| |||  |||||| ||| |||||||||| |||||| |||||||||    
T  26601284 at----------tttgtgggattttctagtgaaactttaacat-taaaagtttttgatgaaaacat-agattttttaggattg 26601214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 3574873 - 3574978
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |    
T  3574873 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattgg 3574972  T
Q  101 attttg 106  Q
    ||||||    
T  3574973 attttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 54 - 183
Target Start/End: Complemental strand, 10125421 - 10125302
Alignment:
Q  54 tgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 153  Q
    ||||||||||||||||||||||||| ||||||||||||||||||          || ||||||||||||||| ||||||||||||| || ||||||||||    
T  10125421 tgatattcaaaatcattcaaatttcaaaggattgtttaataaat----------tgaattttgtgggattttttagtgaaattttaacaagaaaaagtct 10125332  T
Q  154 ttcatgaaaacataagatttcttaggattg 183  Q
    ||||| ||||||  |||||||||| |||||    
T  10125331 ttcataaaaacacgagatttcttaagattg 10125302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 13833606 - 13833441
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||   ||||||||||||||| || |||||||       ||||  || ||||||||||||||||||||| |||||||||||||||||||       
T  13833606 aaaaagtcttgatatattcaatcaagacttttcatcacttaaaaaaagtcttctggtattcaaaatcattcaaattttgaaggattgtttaataaat--- 13833510  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
           |||||||||||||||||| ||||| ||||||| || ||||||||||||||||| || || |||||||||    
T  13833509 -------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgacaagatgagatttctt 13833441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 3463698 - 3463863
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||| ||||||||||||| || |||| ||       |||| ||| |||| |||||||||||| |||| ||||||||||||||||||  |    
T  3463698 aaaaagtcttgaggtgttcaatcaagacttttcatcatttaaaaaaagtcttgtggtatttaaaatcattcaattttcaaaggattgtttaataaattgg 3463797  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||          ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  3463798 attttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaatatgagatttctt 3463863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 379019 - 379079
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 117  Q
    ||||||||||||||||||||| |||||||||||||||||||  ||||||||| ||||||||    
T  379019 tattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgt 379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 215409 - 215320
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgttt 90  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||| ||| |||||||||||    
T  215409 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaacttcaaaggattgttt 215320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 6224732 - 6224626
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatca 99  Q
    ||||||||||| ||||||||||||||| | || |||||||        |||| ||| |||||||||| ||||||||||||||||||| ||||||||||      
T  6224732 aaaaagtcttgaggtattcaatcaagatttttcatcactttaaaaaaagtcttgtggtattcaaaattattcaaatttcgaaggattatttaataaattg 6224633  T
Q  100 gattttg 106  Q
    |||||||    
T  6224632 gattttg 6224626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 6224633 - 6224576
Alignment:
Q  119 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  6224633 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 6224576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 215451 - 215420
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  215451 aaaaagtcttgtggtattcaatcaagactctt 215420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 305734 - 305703
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  305734 aaaaagtcttgtggtattcaatcaagactctt 305703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 7026588 - 7026619
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  7026588 aaaaagtcttgtggtattcaatcaagactctt 7026619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 14198844 - 14198813
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  14198844 aaaaagtcttgtggtattcaatcaagactctt 14198813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 16269633 - 16269664
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  16269633 aaaaagtcttgtggtattcaatcaagactctt 16269664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 20605094 - 20605125
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  20605094 aaaaagtcttgtggtattcaatcaagactctt 20605125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 20605178 - 20605209
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  20605178 aaaaagtcttgtggtattcaatcaagactctt 20605209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 24776297 - 24776328
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  24776297 aaaaagtcttgtggtattcaatcaagactctt 24776328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 26788768 - 26788799
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  26788768 aaaaagtcttgtggtattcaatcaagactctt 26788799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 28740509 - 28740478
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  28740509 aaaaagtcttgtggtattcaatcaagactctt 28740478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 28844539 - 28844570
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  28844539 aaaaagtcttgtggtattcaatcaagactctt 28844570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 32125192 - 32125223
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  32125192 aaaaagtcttgtggtattcaatcaagactctt 32125223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 35317004 - 35317035
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  35317004 aaaaagtcttgtggtattcaatcaagactctt 35317035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 21370687 - 21370638
Alignment:
Q  48 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 97  Q
    |||| ||| ||||||||||||||||||||| |||| ||||||| ||||||    
T  21370687 gtcttgtggtattcaaaatcattcaaattttgaagtattgtttgataaat 21370638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 215493 - 215465
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  215493 aaaaagtcttgtggtattcaatcaagact 215465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 378921 - 378949
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  378921 aaaaagtcttgtggtattcaatcaagact 378949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 7026546 - 7026574
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  7026546 aaaaagtcttgtggtattcaatcaagact 7026574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 13833648 - 13833620
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  13833648 aaaaagtcttgtggtattcaatcaagact 13833620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 26788726 - 26788754
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  26788726 aaaaagtcttgtggtattcaatcaagact 26788754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 28844497 - 28844525
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  28844497 aaaaagtcttgtggtattcaatcaagact 28844525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 150; Significance: 2e-79; HSPs: 92)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 7718543 - 7718361
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7718543 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 7718444  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  7718443 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattg 7718361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 18914916 - 18914710
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  18914916 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggtttgtttaataaatcag 18914817  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||||||    
T  18914816 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagat 18914717  T
Q  201 tttacta 207  Q
    |||||||    
T  18914716 tttacta 18914710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 40996830 - 40996624
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||||||||||||||||||||||||||| |||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40996830 aaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 40996731  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||||||    
T  40996730 attttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagat 40996631  T
Q  201 tttacta 207  Q
    |||||||    
T  40996630 tttacta 40996624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 43581271 - 43581090
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||| |||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43581271 aaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 43581172  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggatt 182  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43581171 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatt 43581090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 47914292 - 47914498
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||| |||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  47914292 aaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaataag 47914391  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       ||||||||||    
T  47914392 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagat 47914491  T
Q  201 tttacta 207  Q
    |||||||    
T  47914492 tttacta 47914498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 7719441 - 7719259
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  7719441 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcag 7719342  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7719341 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 7719259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 973210 - 973416
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||        | ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  973210 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 973309  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||       ||||||||||    
T  973310 attttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagat 973409  T
Q  201 tttacta 207  Q
    |||||||    
T  973410 tttacta 973416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 30440822 - 30441028
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||| ||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30440822 aaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 30440921  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||       ||||||||||    
T  30440922 attttgatggattttgtgggattttctagtgaaattttagtatgaaaaagtctttcgtgaaaacatgagatttcttaggattgtttttttcttttaagat 30441021  T
Q  201 tttacta 207  Q
    |||||||    
T  30441022 tttacta 30441028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 34695299 - 34695505
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||| ||||||||||||||||||||||||||||||||       ||| |||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  34695299 aaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcag 34695398  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||||||    
T  34695399 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagat 34695498  T
Q  201 tttacta 207  Q
    |||||||    
T  34695499 tttacta 34695505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 47879194 - 47879400
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  47879194 aaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttaaaaggattgtttaataaatcag 47879293  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       ||||||||||    
T  47879294 attttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagat 47879393  T
Q  201 tttacta 207  Q
    |||||||    
T  47879394 tttacta 47879400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 12893434 - 12893616
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||||||||| |||||||||||||||||||||       ||||| || |||||||||||||||||||||||||| |||||||||||||||||    
T  12893434 aaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaagaattgtttaataaatcag 12893533  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12893534 attttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 12893616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 44343577 - 44343395
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||| ||||||||||||||||||||||||||       || ||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  44343577 aaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggtatttaaaatcattcaaatttcgaaggattgtttaataaatcag 44343478  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  44343477 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaaaacatgagatttcttaggattg 44343395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 20275444 - 20275238
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||| |||||||||||||||||||||||||||||       ||||  || ||||||||||||||||||||||||||||||||||||||||||||    
T  20275444 aaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 20275345  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||| ||||||||||| ||||       ||||||||||    
T  20275344 attttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaaagcatgagatttcttagcattgtttttttcttttaagat 20275245  T
Q  201 tttacta 207  Q
    |||||||    
T  20275244 tttacta 20275238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 39219557 - 39219352
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||| ||||||||||||||||||||||||||       ||||| || ||||||||||||||||||||| || | |||||||||||||||||    
T  39219557 aaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaagtctattggtattcaaaatcattcaaattttgatg-attgtttaataaatcag 39219459  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||       ||||||||||    
T  39219458 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttcttttaagat 39219359  T
Q  201 tttacta 207  Q
    |||||||    
T  39219358 tttacta 39219352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 34009038 - 34009245
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtc-tagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatca 99  Q
    ||||||||||||||||||||||||| ||||||||||||||       ||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34009038 aaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatca 34009137  T
Q  100 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaaga 199  Q
    |||||||||||||||||||| |||||||| | |||||||||||| ||||||||||||| |||||||| ||||||||||||||||       |||||||||    
T  34009138 gattttgatggattttgtggaattttctaataaaattttagcataaaaaagtctttcaagaaaacatgagatttcttaggattgtttttttcttttaaga 34009237  T
Q  200 ttttacta 207  Q
    ||||||||    
T  34009238 ttttacta 34009245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 32143100 - 32142916
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnn--gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatc 98  Q
    |||||||||| ||||||| |||||||||||||||||||||         |||  ||| ||||||||||||||||||||| ||||||||||||||||||||    
T  32143100 aaaaagtcttatggtattgaatcaagactcttaatcacttcaaaaaaaagtcacgtggtattcaaaatcattcaaattttgaaggattgtttaataaatc 32143001  T
Q  99 agattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||| |||||    
T  32143000 agattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttccataaaaacatgagatttcttaagattg 32142916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 10068485 - 10068668
Alignment:
Q  1 aaaaagtctt-gtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatca 99  Q
    |||||||||| | ||||||||||||||| | || |||||||       |||| ||| ||||||||||||||||||||| ||||||||||||||||||| |    
T  10068485 aaaaagtctttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatta 10068584  T
Q  100 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| |||||||||    
T  10068585 aattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcataaaaacatgagatttgttaggattg 10068668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 29614945 - 29614770
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| |||||||||||||||||||||||||||||||||||||||||||||  |    
T  29614945 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattgg 29614846  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  29614845 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 29614770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 7113482 - 7113660
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||| ||||||||||||||    ||| ||||||||||       ||| |||| |||||||||| |||||||||||| ||||||||||||||||||||    
T  7113482 aaaaagttttgtggtattcaat----acttttaatcacttaaaaaaagtccagtggtattcaaaataattcaaatttcgcaggattgtttaataaatcag 7113577  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  7113578 attttgatagattttgtgggattttctaggaaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggattg 7113660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 23101317 - 23101492
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  23101317 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 23101416  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  23101417 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 23101492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 52 - 153
Target Start/End: Original strand, 43679491 - 43679592
Alignment:
Q  52 agtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 151  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43679491 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 43679590  T
Q  152 ct 153  Q
    ||    
T  43679591 ct 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 3022945 - 3023120
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||| | || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  3022945 aaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 3023044  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| || |||||||||    
T  3023045 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttctt 3023120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 28342366 - 28342541
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||| ||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  28342366 aaaaagtcttgaggtattcaatcgagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 28342465  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  28342466 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 28342541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 39784118 - 39784293
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||| ||||||||||||||||||||||||||  |    
T  39784118 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattgg 39784217  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  39784218 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 39784293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 7993161 - 7993336
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||| ||| || |||||||       ||||  || |||||||||||||||||||||||||||||||||||||||||       
T  7993161 aaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaattga 7993260  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||| ||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  7993261 attttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttctt 7993336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 18838408 - 18838583
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || ||| |||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||  |    
T  18838408 aaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattgg 18838507  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| || |||||||||    
T  18838508 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttctt 18838583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 33382656 - 33382828
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       ||||  || |||||||||||||| ||||||||||||||||||||||||||  |    
T  33382656 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaatcatttaaatttcgaaggattgtttaataaattgg 33382755  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagattt 173  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||| ||||||| || ||||||    
T  33382756 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagattt 33382828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 8675352 - 8675527
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||| ||| ||||||||||||||||||||||  |    
T  8675352 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaacttcgaaggattgtttaataaattgg 8675451  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||| ||||| ||||||| || |||||||||    
T  8675452 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttctt 8675527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 9882417 - 9882243
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||  |    
T  9882417 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattgg 9882318  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| |||||||  | ||||||||||||||| |||| || |||||||||    
T  9882317 attttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aaaaaatgagatttctt 9882243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 28034986 - 28034811
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| | ||||||||||||||| || |||||||       |||| ||| |||||||||| ||||||||||| ||||||||||||||||||  |    
T  28034986 aaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattgg 28034887  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| ||  ||||||||||||||||||| || |||||||||    
T  28034886 attttgatggattttgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaaaagatgagatttctt 28034811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 12963720 - 12963874
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| | ||||||||||||| | || || ||||       |||| ||| ||| ||||||||||||||||||||||||||||||||||||| ||    
T  12963720 aaaaagtcttgagatattcaatcaagatttttcattacttaaaaaaagtctcgtggtatccaaaatcattcaaatttcgaaggattgtttaataaattag 12963819  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttt 155  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  12963820 attttgatggattttgtgggattttctagtgaaattttagtaagaaaaagtcttt 12963874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 9179899 - 9180071
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||| |||| ||||||||||||||||||| |||||||       |||| ||| ||| |||||||| | ||||| ||||||||||||||||||||       
T  9179899 aaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcacttaaattccgaaggattgtttaataaat--- 9179995  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
           |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  9179996 -------tggattttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatttcttaggattg 9180071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 57 - 183
Target Start/End: Complemental strand, 43187482 - 43187356
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 156  Q
    ||||||||||||||||||||| |||| ||||||||||||||  |||||||||| ||||||| ||||||||||||||||||||| || |||||||||||||    
T  43187482 tattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtctttc 43187383  T
Q  157 atgaaaacataagatttcttaggattg 183  Q
    ||||| |||| |||||| || ||||||    
T  43187382 atgaagacatgagattttttgggattg 43187356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 3797238 - 3797066
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| ||||||| |||||| |||||| ||||||||||||||||||| ||    
T  3797238 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaagatcattaaaattttgaaggattgtttaataaattag 3797139  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||         ||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||    
T  3797138 attttga---------tgggattttctagtgaaattttagcatgaaaaagtcttttaagaaaacat-agatttcttaggattg 3797066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 31638910 - 31639015
Alignment:
Q  10 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 109  Q
    |||||||||| ||||||||||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31638910 tgtggtattctatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 31639009  T
Q  110 gatttt 115  Q
    ||||||    
T  31639010 gatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 12740392 - 12740573
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| |||||| |||||||| | || |||| ||       |||| ||| |||||||||||||||||||||| ||||||||||||||||||  |    
T  12740392 aaaaagtcttgaggtatttaatcaagatttttcatcatttaaaaaaagtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaatg-g 12740490  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||| |||||||||||||||| ||||| ||||||| || || |||||||||||| |||| || |||||||||| |||||    
T  12740491 attttgatagattttgtgggattttatagtgtaattttaacaagagaaagtctttcataaaaagatgagatttcttaagattg 12740573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 727538 - 727692
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnng-tctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatca 99  Q
    ||||||||||||| ||||||||||| |||||| |||||||         ||||||  |||||||||||||||||||||| ||||||||||||||||||||    
T  727538 aaaaagtcttgtgatattcaatcaaaactctttatcacttaaaaaaaaatctagtagtattcaaaatcattcaaatttcaaaggattgtttaataaatca 727637  T
Q  100 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 164  Q
    ||||          |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  727638 gatt----------ttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 727692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 152
Target Start/End: Original strand, 25805767 - 25805862
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 152  Q
    ||||||||||||||||||||||| |||||||||||||||||   ||| |||||||||||||||||||||||| | |||||||||||||||||||||    
T  25805767 tattcaaaatcattcaaatttcgtaggattgtttaataaattgaattatgatggattttgtgggattttctaataaaattttagcatgaaaaagtc 25805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 10676601 - 10676463
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||| |||||||||||||||||||||||| || |||||||       ||||  |  |||||||||||||||||||||||||||||||||||||||||  |    
T  10676601 aaaaggtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 10676502  T
Q  101 attttgatggattttgtgggattttctagtgaaatttta 139  Q
    |||| |||||||||| ||| ||||||| |||||||||||    
T  10676501 atttggatggattttatggaattttcttgtgaaatttta 10676463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 176
Target Start/End: Complemental strand, 37972981 - 37972873
Alignment:
Q  68 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacata 167  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||||||| |||||||| ||||| ||||||| || |||||||||||||||||||| ||     
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatg 37972882  T
Q  168 agatttctt 176  Q
    ||| |||||    
T  37972881 agacttctt 37972873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 44122081 - 44121965
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||        ||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  44122081 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 44121982  T
Q  101 attttgatggattttgt 117  Q
    |||||||||||||||||    
T  44121981 attttgatggattttgt 44121965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 32883801 - 32883948
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||  ||||||||| |||||| || |||||||       |||| ||| ||||||||||||||||||||||||| ||||||||| |||||  |    
T  32883801 aaaaagtcttgaagtattcaattaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttattaaattgg 32883900  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaa 148  Q
    |||||||||||||| |||||||||| ||||| ||||||| || |||||    
T  32883901 attttgatggatttcgtgggattttgtagtgtaattttaacaagaaaa 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 19251558 - 19251729
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||| | | || |||||||       |||| ||| |||||||||||||||||||||||||||||||||||||||||       
T  19251558 aaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaat--- 19251654  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggatt 182  Q
           |||||||||  ||||||||| ||||||||||||||  |||||||||||||||||||| | | ||||||| |||||    
T  19251655 -------tggattttgatggattttcttgtgaaattttagcaataaaaagtctttcatgaaaacctgaaatttcttgggatt 19251729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 46405612 - 46405494
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||| || |||||||||||||||  |    
T  46405612 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaatgattgtttaataaattgg 46405513  T
Q  101 attttgatggattttgtgg 119  Q
    |||||||||||||||||||    
T  46405512 attttgatggattttgtgg 46405494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 176
Target Start/End: Original strand, 19810874 - 19810983
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 156  Q
    |||||||||||||||||||||| || |||||||||||||||          |||||||||||| ||||||||||||||||||||||| |||| |||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaat----------tggattttgtggaattttctagtgaaattttagcataaaaatgtctttc 19810963  T
Q  157 atgaaaacataagatttctt 176  Q
    |||||||||| |||||||||    
T  19810964 atgaaaacatgagatttctt 19810983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 68 - 176
Target Start/End: Original strand, 41827390 - 41827498
Alignment:
Q  68 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacata 167  Q
    ||||||| || |||||||||||||||||||  |||||||||||||||||||||||| | ||||| ||||||| || ||||| |||||||||||||| ||     
T  41827390 attcaaaatttgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatg 41827489  T
Q  168 agatttctt 176  Q
    |||||||||    
T  41827490 agatttctt 41827498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 509675 - 509840
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||  |    
T  509675 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaacgattgtttaataaattgg 509774  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    |||||||||||||||||          ||||  |||||| || |||||||||||||||||||| || |||||||||    
T  509775 attttgatggattttgt----------agtgggattttaacaagaaaaagtctttcatgaaaagatgagatttctt 509840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 40460888 - 40460772
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| | ||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||  |    
T  40460888 aaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattgg 40460789  T
Q  101 attttgatggattttgt 117  Q
    |||||||||||||||||    
T  40460788 attttgatggattttgt 40460772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 173
Target Start/End: Complemental strand, 44256935 - 44256775
Alignment:
Q  13 ggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 112  Q
    ||||||||||||||||| || |||||||       || | ||| ||||||||||||||||||||||||| |||||||||||||||  ||||| |||| ||    
T  44256935 ggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggatttggatgaat 44256836  T
Q  113 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagattt 173  Q
    ||||| |||||||  |||| ||||||| || |||||||| |||||| |||| || ||||||    
T  44256835 tttgttggattttgcagtgtaattttaacaagaaaaagtttttcatcaaaatatgagattt 44256775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 44623457 - 44623305
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||||||||| ||||||||||||| |||||||       |||| |||||||||||||||||||| ||||| || || ||||||||||||       
T  44623457 aaaaagtcttgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaatcattcatatttctaaagactgtttaataaat--- 44623361  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 163  Q
           || ||||||||| |||||||||||||||||||| |||||||||||| |||| ||||    
T  44623360 -------tgaattttgtggaattttctagtgaaattttagaatgaaaaagtctctcataaaaa 44623305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 37327946 - 37328062
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || || ||||       |||| ||| |||||||||||||||||||||| ||||||||||||||||||       
T  37327946 aaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattga 37328045  T
Q  101 attttgatggattttgt 117  Q
    |||||||||||||||||    
T  37328046 attttgatggattttgt 37328062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 33892431 - 33892315
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||||||| ||||||| |||||||  |    
T  33892431 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgttaaataaattgg 33892332  T
Q  101 attttgatggattttgt 117  Q
    ||||| ||| |||||||    
T  33892331 atttttatgaattttgt 33892315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 39028116 - 39028232
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| | ||||||||||||||| || |||||||       |||| ||| ||||||||||| |||||||| |||| |||||||||||||||  |    
T  39028116 aaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaaaatcgttcaaattacgaaagattgtttaataaattgg 39028215  T
Q  101 attttgatggattttgt 117  Q
    |||||||||||||||||    
T  39028216 attttgatggattttgt 39028232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 168
Target Start/End: Original strand, 10617024 - 10617104
Alignment:
Q  88 tttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataa 168  Q
    |||||||||| |||||||||||||||||||| ||||||||||||| ||||||| |  || ||||||||||| |||||||||    
T  10617024 tttaataaattagattttgatggattttgtgagattttctagtgatattttagtaataacaagtctttcataaaaacataa 10617104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 164
Target Start/End: Complemental strand, 1470358 - 1470252
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 156  Q
    ||||||||||| |||||||||  ||| |||||||||| ||| |||||||||| | ||||||||||||||||  | |||||||||||||||||| |||||     
T  1470358 tattcaaaatcgttcaaattttaaagcattgtttaatgaattagattttgatag-ttttgtgggattttctgataaaattttagcatgaaaaaatctttt 1470260  T
Q  157 atgaaaac 164  Q
     |||||||    
T  1470259 ttgaaaac 1470252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 29585534 - 29585649
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||| ||| ||| ||||||       ||||  || ||||||||||||||||||||| ||||||||||||||||| |  |    
T  29585534 aaaaagtcttgaggtattcaatcaaaactttta-tcacttaaaaaaagtcttctggtattcaaaatcattcaaattttgaaggattgtttaataatttgg 29585632  T
Q  101 attttgatggattttgt 117  Q
    |||||||||||||||||    
T  29585633 attttgatggattttgt 29585649  T

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Target: chr7; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 17001204 - 17001099
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| |||||||||| |||||| || |||||||        | | ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  17001204 aaaaagtcttgaggtattcaataaagacttttcatcacttaaaaaaaatatcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 17001105  T
Q  101 attttg 106  Q
    ||||||    
T  17001104 attttg 17001099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 47066770 - 47066828
Alignment:
Q  48 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 106  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  47066770 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 47066828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 447858 - 447913
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggat 112  Q
    |||| |||||||||||||||||||| ||||||||||| |||  |||||||||||||    
T  447858 tatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgatggat 447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 973126 - 973157
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  973126 aaaaagtcttgtggtattcaatcaagactctt 973157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 8078337 - 8078368
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  8078337 aaaaagtcttgtggtattcaatcaagactctt 8078368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 12893350 - 12893381
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  12893350 aaaaagtcttgtggtattcaatcaagactctt 12893381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 12963678 - 12963709
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  12963678 aaaaagtcttgtggtattcaatcaagactctt 12963709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 17001246 - 17001215
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  17001246 aaaaagtcttgtggtattcaatcaagactctt 17001215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 18915000 - 18914969
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  18915000 aaaaagtcttgtggtattcaatcaagactctt 18914969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 19251516 - 19251547
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  19251516 aaaaagtcttgtggtattcaatcaagactctt 19251547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 23101275 - 23101306
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  23101275 aaaaagtcttgtggtattcaatcaagactctt 23101306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 28342324 - 28342355
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  28342324 aaaaagtcttgtggtattcaatcaagactctt 28342355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 29614987 - 29614956
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  29614987 aaaaagtcttgtggtattcaatcaagactctt 29614956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 29893058 - 29893089
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  29893058 aaaaagtcttgtggtattcaatcaagactctt 29893089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 34695173 - 34695204
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  34695173 aaaaagtcttgtggtattcaatcaagactctt 34695204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 34695215 - 34695246
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  34695215 aaaaagtcttgtggtattcaatcaagactctt 34695246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 37327904 - 37327935
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  37327904 aaaaagtcttgtggtattcaatcaagactctt 37327935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 39219600 - 39219569
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  39219600 aaaaagtcttgtggtattcaatcaagactctt 39219569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 39784076 - 39784107
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  39784076 aaaaagtcttgtggtattcaatcaagactctt 39784107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 43581355 - 43581324
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  43581355 aaaaagtcttgtggtattcaatcaagactctt 43581324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 43679412 - 43679443
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  43679412 aaaaagtcttgtggtattcaatcaagactctt 43679443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 44343661 - 44343630
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  44343661 aaaaagtcttgtggtattcaatcaagactctt 44343630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 48117816 - 48117785
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  48117816 aaaaagtcttgtggtattcaatcaagactctt 48117785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 36
Target Start/End: Original strand, 8078428 - 8078457
Alignment:
Q  7 tcttgtggtattcaatcaagactcttaatc 36  Q
    ||||||||||||||||||||||||||||||    
T  8078428 tcttgtggtattcaatcaagactcttaatc 8078457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 17001106 - 17001049
Alignment:
Q  119 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||| ||||| |||| || || |||||||||||||||||||| || |||||||||    
T  17001106 ggattttgtagtgtaattataacaagaaaaagtctttcatgaaaatatgagatttctt 17001049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 509633 - 509661
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  509633 aaaaagtcttgtggtattcaatcaagact 509661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 3022903 - 3022931
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  3022903 aaaaagtcttgtggtattcaatcaagact 3022931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 7993077 - 7993105
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  7993077 aaaaagtcttgtggtattcaatcaagact 7993105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 17001288 - 17001260
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  17001288 aaaaagtcttgtggtattcaatcaagact 17001260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 21067817 - 21067845
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  21067817 aaaaagtcttgtggtattcaatcaagact 21067845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 28035028 - 28035000
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  28035028 aaaaagtcttgtggtattcaatcaagact 28035000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 29615029 - 29615001
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  29615029 aaaaagtcttgtggtattcaatcaagact 29615001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 37327862 - 37327890
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  37327862 aaaaagtcttgtggtattcaatcaagact 37327890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 39028032 - 39028060
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  39028032 aaaaagtcttgtggtattcaatcaagact 39028060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 41827291 - 41827319
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  41827291 aaaaagtcttgtggtattcaatcaagact 41827319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 48117858 - 48117830
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  48117858 aaaaagtcttgtggtattcaatcaagact 48117830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 149; Significance: 9e-79; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 15215 - 15009
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||| |||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15215 aaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 15116  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||       ||||||||||    
T  15115 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggattgtttttttcttttaagat 15016  T
Q  201 tttacta 207  Q
    |||||||    
T  15015 tttacta 15009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 149; Significance: 9e-79; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 15858 - 15652
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||| |||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  15858 aaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 15759  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||       ||||||||||    
T  15758 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttaggattgtttttttcttttaagat 15659  T
Q  201 tttacta 207  Q
    |||||||    
T  15658 tttacta 15652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 149; Significance: 9e-79; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 38786 - 38581
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  38786 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa-tcag 38688  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||||||    
T  38687 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagat 38588  T
Q  201 tttacta 207  Q
    |||||||    
T  38587 tttacta 38581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 145; Significance: 2e-76; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 19451990 - 19451784
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||||||||| |||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  19451990 aaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggatcgtttaataaatcag 19451891  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||       ||||||||||    
T  19451890 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattgtttttttcttttaagat 19451791  T
Q  201 tttacta 207  Q
    |||||||    
T  19451790 tttacta 19451784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 21222165 - 21222371
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||||| | ||||||||||||||||||||||||||||||||||||||||| ||    
T  21222165 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaaaatcattcaaatttcgaaggattgtttaataaataag 21222264  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||||||    
T  21222265 attttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttattttcttttaagat 21222364  T
Q  201 tttacta 207  Q
    |||||||    
T  21222365 tttacta 21222371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 50192733 - 50192526
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatca 99  Q
    ||||||||||||||||||||||||||||||||||||||||        |||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  50192733 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatca 50192634  T
Q  100 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaaga 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||       |||||||||    
T  50192633 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattttttaggattgtttttttcttttaaga 50192534  T
Q  200 ttttacta 207  Q
    ||||||||    
T  50192533 ttttacta 50192526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 45760191 - 45759985
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||| |||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  45760191 aaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaacttcgaaggattgtttaataaatcag 45760092  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||       ||||||||||    
T  45760091 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatgaaaacatgagatttcttaggattgtttttttcttttaagat 45759992  T
Q  201 tttacta 207  Q
    |||||||    
T  45759991 tttacta 45759985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 35279690 - 35279872
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||| ||||||||||       |||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  35279690 aaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcag 35279789  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| ||||    
T  35279790 attttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaacatgagatttcttagaattg 35279872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 47780729 - 47780935
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||| |||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||| ||  |||||||||||||||||||||    
T  47780729 aaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaaattaaaaggattgtttaataaatcag 47780828  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| |||||       ||||||||||    
T  47780829 attttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttcttaagattgtttttttcttttaagat 47780928  T
Q  201 tttacta 207  Q
    |||||||    
T  47780929 tttacta 47780935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 49198450 - 49198245
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||| |||||||||||||| |||||||||||||||||       ||  |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  49198450 aaaaagttttgtggtattcaat-aagactcttaatcacttaaaaaaagttcagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 49198352  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||       ||||||||||    
T  49198351 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgatatttcttaggattgtttttttcttttaagat 49198252  T
Q  201 tttacta 207  Q
    |||||||    
T  49198251 tttacta 49198245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 6304435 - 6304252
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaaga-ctcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatca 99  Q
    ||||||||||||||||||||| ||| | |||||||||||||       |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6304435 aaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatca 6304336  T
Q  100 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||    
T  6304335 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttcttatgattg 6304252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 28824554 - 28824349
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||||||||||       |||| ||| |||||||||||||||||||||||||| |||||||||||||||||    
T  28824554 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattcaaaatcattcaaatttcgaag-attgtttaataaatcag 28824456  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagat 200  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || ||||||| ||||||||||||||||       ||||||||||    
T  28824455 attttgatggattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaaaacatgagatttcttaggattgtttttttcttttaagat 28824356  T
Q  201 tttacta 207  Q
    |||||||    
T  28824355 tttacta 28824349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 4 - 207
Target Start/End: Complemental strand, 47654531 - 47654327
Alignment:
Q  4 aagtcttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagat 102  Q
    |||||||||||||||||||||| ||||||||||||||        |||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  47654531 aagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaatcagat 47654432  T
Q  103 tttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagattt 202  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||       ||||||||||||    
T  47654431 tttgatggattttgtggaattttctagggaaattttagcatgaaaaagtatttcatgaaaacatgagatttcttaggattgtttttttcttttaagattt 47654332  T
Q  203 tacta 207  Q
    |||||    
T  47654331 tacta 47654327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 45535964 - 45536125
Alignment:
Q  3 aaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagat 102  Q
    ||||| |||||||||||||||||||||||||||| |||       |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  45535964 aaagtgttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagat 45536063  T
Q  103 tttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45536064 tttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 45536125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 35679310 - 35679128
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||| |||||| |||||||||||||||||||||||||||       |||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35679310 aaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 35679211  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||    
T  35679210 attttgatggatttgatgggattttctagtgaaattttagcatgaaaaagtctttcatgaagacatgagatttcttaagattg 35679128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 178
Target Start/End: Original strand, 49418111 - 49418279
Alignment:
Q  10 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 109  Q
    ||||||||||||| |||||||||||||||||       |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  49418111 tgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgatg 49418210  T
Q  110 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttag 178  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||| || |||||||||||    
T  49418211 gattttgtgggattttctattgaaattttagcatgaaaaaatctttcatgaaaatatgagatttcttag 49418279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 29556122 - 29556305
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||| ||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||||| ||||||||||||||| ||    
T  29556122 aaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaaatctagtgttattcaaaatcattcaaatttcgaaagattgtttaataaattag 29556221  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa-acataagatttcttaggattg 183  Q
    ||||||||||||||| |||||||||||| |||||||||||| ||||||||||||| |||||| |||| ||||||||||||||||    
T  29556222 attttgatggattttatgggattttctaatgaaattttagcttgaaaaagtcttttatgaaacacatgagatttcttaggattg 29556305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 7 - 173
Target Start/End: Complemental strand, 32589129 - 32588963
Alignment:
Q  7 tcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 106  Q
    |||||||| ||||||||||||||||| |||||||       |||| ||| ||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  32589129 tcttgtggcattcaatcaagactcttcatcacttaaaagaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcggattttg 32589030  T
Q  107 atggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagattt 173  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  32589029 atggattttgtgagattttctagtgaaattttagcataaaaaagtctttcatgaaaacatgagattt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 57 - 206
Target Start/End: Complemental strand, 31572323 - 31572174
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 156  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  31572323 tattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaagtctttc 31572224  T
Q  157 atgaaaacataagatttcttaggattgnnnnnnncttttaagattttact 206  Q
    |||||| ||| ||||||||||| ||||       ||||||||||||||||    
T  31572223 atgaaatcatgagatttcttagaattgtttttttcttttaagattttact 31572174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 730166 - 730314
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnn-gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatca 99  Q
    ||||||||||||||||||||||||||||||||||||||||        |||||||| |||||||||||||||||||||||| | ||||||||||||||||    
T  730166 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcgacgaattgtttaataaatca 730265  T
Q  100 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaa 148  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  730266 gattttgatggattttgtgagattttctagtgaaattttagcatgaaaa 730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 9577614 - 9577432
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| | |||| |||||| ||| || |||||||       |||| ||||||||||||||||||||||||| |||||||||||||||||||  |    
T  9577614 aaaaagtcttgagatattaaatcaaaactttttatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttagaaggattgtttaataaattgg 9577515  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||| ||||||    
T  9577514 attttgatggattttgtgagattttctagtgaaattttagaatgaaaaaatctttcatgaaaacatgagatttcttgggattg 9577432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 6312592 - 6312767
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  6312592 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 6312691  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  6312692 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 6312767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 29396570 - 29396395
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  29396570 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 29396471  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  29396470 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 29396395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 4 - 183
Target Start/End: Complemental strand, 37014819 - 37014640
Alignment:
Q  4 aagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagatt 103  Q
    |||||||||||||||||||||| | |||| |||||||       |||| |||||||||||||||||||||||||| || |||||||| ||||||   |||    
T  37014819 aagtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttctaaagattgttttataaattgaatt 37014720  T
Q  104 ttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||| |||||    
T  37014719 ttgatggattttgtcggattttctagtgaaattttagcatgaaaaagtctctcataaaaacatgagatttcttaagattg 37014640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 46328060 - 46328234
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||||||||||||||||||| |||  |    
T  46328060 aaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaattaattgg 46328159  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttct 175  Q
    ||||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| |||||||||||    
T  46328160 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagataagatttct 46328234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 48524337 - 48524490
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||| || ||||||||| |||||| ||||||||||||||       |||| ||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  48524337 aaaaattcatgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttgtgatattcaaaatcattcaaattttgaaagattgtttaataaatcag 48524436  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctt 154  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48524437 tttttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 51701598 - 51701770
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  51701598 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 51701697  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagattt 173  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || ||||||    
T  51701698 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 51701770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 48177644 - 48177469
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||| | | || |||||||       |||| ||| ||||||||||||||||||||||||| |||||||||||||||  |    
T  48177644 aaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattgg 48177545  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  48177544 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 48177469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 25612175 - 25612350
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||| | || |||| ||       |||| ||| |||||||||||||||||||||| ||||||||||||||||||  |    
T  25612175 aaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgg 25612274  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||  ||||||| || |||||||||||||||||||| || |||||||||    
T  25612275 attttgatggattttgtgggattttgtagtataattttaacaagaaaaagtctttcatgaaaagatgagatttctt 25612350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 33025530 - 33025703
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaaga-ctcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatca 99  Q
    ||||| ||||||||||||||||||| | |||||||||||||       |||| ||| ||||||||||||||||||||| |||||||||||||||| ||||    
T  33025530 aaaaattcttgtggtattcaatcaaaaactcttaatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaatacatca 33025629  T
Q  100 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    ||||          ||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  33025630 gatt----------ttgtgggattttctaataaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 33025703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 9322682 - 9322507
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||| ||||||||| || |||| ||       |||  ||| ||||||||||||||||||||| |||||||||||||||||||       
T  9322682 aaaaagtcttgaggtattcgatcaagacttttcatcatttaaaaaaagtcctgtggtattcaaaatcattcaaatttagaaggattgtttaataaattga 9322583  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||| ||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  9322582 attttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 9322507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 15835235 - 15835060
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| |||||||||||||||||  | |||| ||        ||| ||| |||||||||||||||||||| | ||||||||||||||||||  |    
T  15835235 aaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaattgcaaaggattgtttaataaattgg 15835136  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||| ||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  15835135 attttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 15835060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 28387575 - 28387400
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||        ||| ||| |||||||| ||||||||||||||||||||||||||||||||  |    
T  28387575 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaattcattcaaatttcgaaggattgtttaataaattgg 28387476  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||  ||||||| ||  |||||||||||||| |||| || |||||||||    
T  28387475 attttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtctttcataaaaagatgagatttctt 28387400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 29219304 - 29219469
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| | ||||||||||||||| || |||||||       |||| ||| ||||||||||||||||||||  |||||||||||||||||||  |    
T  29219304 aaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattgg 29219403  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    |||||||||||||||||          |||| ||||||| || |||||||| ||||||||||| || |||||||||    
T  29219404 attttgatggattttgt----------agtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttctt 29219469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 38536271 - 38536106
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||| ||| ||||||||||||||||| || || ||||       |||| ||| |||||||||| ||||||||||| ||||||||||||||||||  |    
T  38536271 aaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattgg 38536172  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||          ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  38536171 attttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 38536106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 38558489 - 38558324
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||| ||| ||||||||||||||||| || || ||||       |||| ||| |||||||||| ||||||||||| ||||||||||||||||||  |    
T  38558489 aaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattgg 38558390  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||          ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  38558389 attttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 38558324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 955824 - 955882
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 115  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  955824 tattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 18798509 - 18798614
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| |||||||||||||||||||||||||||||||||||||||||  |    
T  18798509 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgg 18798608  T
Q  101 attttg 106  Q
    ||||||    
T  18798609 attttg 18798614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 5495278 - 5495117
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||| ||||||| ||||||| ||||||||||       
T  5495278 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcatttaaatttcaaaggattatttaataaat--- 5495182  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatt 172  Q
           |||||||||||||||||| ||||| ||||||| || ||||||||| || ||||||| || |||||    
T  5495181 -------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 49230904 - 49231000
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaat 97  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||||||| ||||||||||    
T  49230904 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaat 49231000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 183
Target Start/End: Complemental strand, 48668901 - 48668785
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 156  Q
    |||||||||| |||||||||||||| |||||||||||||||          |||||||||||||||| | ||||| ||||||| || |||||||||||||    
T  48668901 tattcaaaattattcaaatttcgaaagattgtttaataaat----------tggattttgtgggattctgtagtgtaattttaacaagaaaaagtctttc 48668812  T
Q  157 atgaaaacataagatttcttaggattg 183  Q
    ||||||| || |||||| || ||||||    
T  48668811 atgaaaagatgagatttgttgggattg 48668785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 51085860 - 51085951
Alignment:
Q  48 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 139  Q
    |||| ||| |||||||||| |||||||||| |||||||| || |||||||  |||||||||| ||||||||| ||||||| |||||||||||    
T  51085860 gtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtggaattttcttgtgaaatttta 51085951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 47784405 - 47784542
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||||||||||||||||||||||  ||| ||       |||| ||| |||||||||| ||||||| ||| || |||||||||||||||       
T  47784405 aaaaagtcttgtggtattcaatcaagactctttgtca-tttaaaaaagtcttgtggtattcaaaattattcaaacttctaaagattgtttaataaat--- 47784500  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 149  Q
           ||||||||||| ||||||||||| ||||||||||||||||||    
T  47784501 -------tggattttgtgagattttctagttaaattttagcatgaaaaa 47784542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 22183388 - 22183457
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcatt 70  Q
    ||||||||||||||||||||||||||| ||||||||||||       |||||||| ||||||||||||||    
T  22183388 aaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 22183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 31622585 - 31622536
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg 106  Q
    |||||||||||||||||||||| || |||||||||||||||| |||||||    
T  31622585 tattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttg 31622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 953837 - 953876
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcactt 40  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  953837 aaaaagtcttgtggtattcgatcaagactcttaatcactt 953876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 38319996 - 38320086
Alignment:
Q  73 aatttcgaaggattgtttaataaatcagattttgatggattttgt-gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 163  Q
    ||||| ||| ||||||||| |||||  ||||||||| |||||||| ||| |||| ||||||| ||||||||  |||||||||||||||||||    
T  38319996 aattttgaatgattgtttactaaataggattttgatagattttgttgggtttttttagtgaa-ttttagcacaaaaaagtctttcatgaaaa 38320086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 730082 - 730113
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  730082 aaaaagtcttgtggtattcaatcaagactctt 730113  T

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Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 953753 - 953784
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  953753 aaaaagtcttgtggtattcaatcaagactctt 953784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 15835277 - 15835246
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  15835277 aaaaagtcttgtggtattcaatcaagactctt 15835246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 18798467 - 18798498
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  18798467 aaaaagtcttgtggtattcaatcaagactctt 18798498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 19452074 - 19452043
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  19452074 aaaaagtcttgtggtattcaatcaagactctt 19452043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 19452116 - 19452085
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  19452116 aaaaagtcttgtggtattcaatcaagactctt 19452085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 21222082 - 21222113
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  21222082 aaaaagtcttgtggtattcaatcaagactctt 21222113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 22183304 - 22183335
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  22183304 aaaaagtcttgtggtattcaatcaagactctt 22183335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 25612133 - 25612164
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  25612133 aaaaagtcttgtggtattcaatcaagactctt 25612164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 28824638 - 28824607
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  28824638 aaaaagtcttgtggtattcaatcaagactctt 28824607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 31572386 - 31572347
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcactt 40  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  31572386 aaaaagtcttgtggtatttaattaagactcttaatcactt 31572347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 35279606 - 35279637
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  35279606 aaaaagtcttgtggtattcaatcaagactctt 35279637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 38536313 - 38536282
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  38536313 aaaaagtcttgtggtattcaatcaagactctt 38536282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 38558531 - 38558500
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  38558531 aaaaagtcttgtggtattcaatcaagactctt 38558500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 46328018 - 46328049
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  46328018 aaaaagtcttgtggtattcaatcaagactctt 46328049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 47780553 - 47780584
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  47780553 aaaaagtcttgtggtattcaatcaagactctt 47780584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 206
Target Start/End: Original strand, 48524805 - 48524865
Alignment:
Q  146 aaaagtctttcatgaaaacataagatttcttaggattgnnnnnnncttttaagattttact 206  Q
    ||||||||||||||||||||| |||||| |||||||||       ||||||||||||||||    
T  48524805 aaaagtctttcatgaaaacatgagatttgttaggattggttttttcttttaagattttact 48524865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 49198533 - 49198502
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  49198533 aaaaagtcttgtggtattcaatcaagactctt 49198502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 49230862 - 49230893
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  49230862 aaaaagtcttgtggtattcaatcaagactctt 49230893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 29219264 - 29219294
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactct 31  Q
    |||||||||||||||||||||||||||||||    
T  29219264 aaaaagtcttgtggtattcaatcaagactct 29219294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 147
Target Start/End: Original strand, 955876 - 955904
Alignment:
Q  119 ggattttctagtgaaattttagcatgaaa 147  Q
    |||||||||||||||||||||||||||||    
T  955876 ggattttctagtgaaattttagcatgaaa 955904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 6304520 - 6304492
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  6304520 aaaaagtcttgtggtattcaatcaagact 6304492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 6312508 - 6312536
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  6312508 aaaaagtcttgtggtattcaatcaagact 6312536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 8141394 - 8141366
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  8141394 aaaaagtcttgtggtattcaatcaagact 8141366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 9322766 - 9322738
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  9322766 aaaaagtcttgtggtattcaatcaagact 9322738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 15835319 - 15835291
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  15835319 aaaaagtcttgtggtattcaatcaagact 15835291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 18798615 - 18798663
Alignment:
Q  127 tagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttct 175  Q
    ||||| ||||||| || |||||||||||||||||||| || ||||||||    
T  18798615 tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 18798663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 29219222 - 29219250
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  29219222 aaaaagtcttgtggtattcaatcaagact 29219250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 29396654 - 29396626
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  29396654 aaaaagtcttgtggtattcaatcaagact 29396626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 42657765 - 42657793
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  42657765 aaaaagtcttgtggtattcaatcaagact 42657793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 48177728 - 48177700
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  48177728 aaaaagtcttgtggtattcaatcaagact 48177700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 39077 - 38895
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||||||||||||| |||||||||||||||||       |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  39077 aaaaagtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcag 38978  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||    
T  38977 attttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagattccttaggattg 38895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39119 - 39083
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatca 37  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  39119 aaaaagtcttgtggtattcaatcaagattctttatca 39083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 134; Significance: 8e-70; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 5 - 183
Target Start/End: Original strand, 102124 - 102302
Alignment:
Q  5 agtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattt 104  Q
    ||||||||||||||||||||||||||||||||||||       |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  102124 agtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattt 102223  T
Q  105 tgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||| |||||    
T  102224 tgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaatatgagatttcttatgattg 102302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 100236 - 100415
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    |||||||||||||||| |||||||||||||||||||||||       |||||||| |||||||||||||||||||||| ||||||||||||||||||||     
T  100236 aaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggattgtttaataaatcaa 100335  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttagga 180  Q
    |||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||    
T  100336 attttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaacatgagatttcttagga 100415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 109; Significance: 7e-55; HSPs: 2)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 721 - 540
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||| ||||||||||||||||| ||||||||||||||        | ||||| ||||||||||||||||||||| |||||||||||||||||||||     
T  721 aaaaagtattgtggtattcaatcaaaactcttaatcacttaaattttttttagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcat 622  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggatt 182  Q
    ||||||||||||||||||| |||||||||||||||||| | |||||||||||||| | |||||||| |||||||||||||||    
T  621 attttgatggattttgtggaattttctagtgaaattttggtatgaaaaagtctttgacgaaaacatgagatttcttaggatt 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 805 - 774
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  805 aaaaagtcttgtggtattcaatcaagactctt 774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 37089 - 36914
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||||| ||||||||||||||||||  ||| ||       |||| | | |||||||||||||| ||||||||||| ||||||||||||||  |    
T  37089 aaaaagtcttgtgctattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaaaatcattaaaatttcgaagcattgtttaataaattgg 36990  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  36989 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttctt 36914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 84; Significance: 6e-40; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 57 - 176
Target Start/End: Complemental strand, 39743 - 39624
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 156  Q
    |||||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||    
T  39743 tattcaaaatcattcaaacttcgaaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 39644  T
Q  157 atgaaaacataagatttctt 176  Q
    ||||||| ||||||||||||    
T  39643 atgaaaagataagatttctt 39624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 39883 - 39855
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  39883 aaaaagtcttgtggtattcaatcaagact 39855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 79; Significance: 5e-37; HSPs: 3)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 10585 - 10760
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| |||||||||||||||||  | |||| ||        ||| ||| |||||||||||||||||||||| ||||||||||||||||||       
T  10585 aaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattga 10684  T
Q  101 attttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||||||| ||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  10685 attttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 10760  T

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Target: scaffold0543; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 10543 - 10574
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  10543 aaaaagtcttgtggtattcaatcaagactctt 10574  T

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Target: scaffold0543; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 10501 - 10529
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  10501 aaaaagtcttgtggtattcaatcaagact 10529  T

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Target: scaffold1504 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 48 - 176
Target Start/End: Original strand, 936 - 1063
Alignment:
Q  48 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 147  Q
    |||| ||| |||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||| ||||| ||||||| |  ||||    
T  936 gtcttgtggtattcaaaatcattcaaatttcgaagaattatttaataaat-agattttgatggattttgtgggattttgtagtgtaattttaactagaaa 1034  T
Q  148 aagtctttcatgaaaacataagatttctt 176  Q
    ||||||||||| |||| || |||||||||    
T  1035 aagtctttcattaaaatatgagatttctt 1063  T

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Target: scaffold1504; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 846 - 877
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  846 aaaaagtcttgtggtattcaatcaagactctt 877  T

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Target: scaffold0042 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 57 - 176
Target Start/End: Complemental strand, 58202 - 58083
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 156  Q
    ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||  ||||||| || || ||| ||||||    
T  58202 tattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatctttc 58103  T
Q  157 atgaaaacataagatttctt 176  Q
    ||||||| || |||||||||    
T  58102 atgaaaagatgagatttctt 58083  T

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Target: scaffold0042; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 58300 - 58272
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  58300 aaaaagtcttgtggtattcaatcaagact 58272  T

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Target: scaffold0922 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 4225 - 4337
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| ||| ||||||||||||||||||||| |||||||||||||||||||  |    
T  4225 aaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattgg 4324  T
Q  101 attttgatggatt 113  Q
    |||||||||||||    
T  4325 attttgatggatt 4337  T

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Target: scaffold0922; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 4183 - 4214
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  4183 aaaaagtcttgtggtattcaatcaagactctt 4214  T

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Target: scaffold0922; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 4141 - 4169
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  4141 aaaaagtcttgtggtattcaatcaagact 4169  T

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Target: scaffold0306 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 13907 - 14023
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||| ||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||| || |||||||||||||||  |    
T  13907 aaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattgg 14006  T
Q  101 attttgatggattttgt 117  Q
    |||||||||||||||||    
T  14007 attttgatggattttgt 14023  T

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Target: scaffold0306; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 13865 - 13896
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  13865 aaaaagtcttgtggtattcaatcaagactctt 13896  T

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Target: scaffold0152 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 21420 - 21304
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactcttaatcacttnnnnnnngtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcag 100  Q
    ||||||| ||| ||||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||| || |||||||||||||||  |    
T  21420 aaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattgg 21321  T
Q  101 attttgatggattttgt 117  Q
    |||||||||||||||||    
T  21320 attttgatggattttgt 21304  T

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Target: scaffold0152; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 21462 - 21431
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  21462 aaaaagtcttgtggtattcaatcaagactctt 21431  T

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Target: scaffold0839 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 163
Target Start/End: Complemental strand, 3798 - 3712
Alignment:
Q  77 tcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 163  Q
    ||||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||| ||||||||| ||||    
T  3798 tcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaa 3712  T

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Target: scaffold0347 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 14892 - 14967
Alignment:
Q  108 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttaggattg 183  Q
    |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||| |||||    
T  14892 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattg 14967  T

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Target: scaffold0347; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 14836 - 14864
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagact 29  Q
    |||||||||||||||||||||||||||||    
T  14836 aaaaagtcttgtggtattcaatcaagact 14864  T

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Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 57 - 149
Target Start/End: Original strand, 199906 - 199998
Alignment:
Q  57 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 149  Q
    |||| |||||||||||||||| ||| || ||||||||||||   |||||||| ||||||||| |||||| |||||||| ||||| || |||||    
T  199906 tatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtgaaactttagtataaaaaa 199998  T

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Target: scaffold0010 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 233720 - 233751
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  233720 aaaaagtcttgtggtattcaatcaagactctt 233751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 234568 - 234599
Alignment:
Q  1 aaaaagtcttgtggtattcaatcaagactctt 32  Q
    ||||||||||||||||||||||||||||||||    
T  234568 aaaaagtcttgtggtattcaatcaagactctt 234599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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