View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20665_high_121 (Length: 257)
Name: NF20665_high_121
Description: NF20665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20665_high_121 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 13 - 257
Target Start/End: Original strand, 21781684 - 21781928
Alignment:
| Q |
13 |
aatatcttccatttcatttccattgcttcccttccaatcaacccccaacaatcaaattcaacaaccactttttcatctaaaaagtcaattttacccctta |
112 |
Q |
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| T |
21781684 |
aatatcttccatttcatttccattgcttcccttccaatcaaccctcaacaatcaaattcaacaaccactttttcatctaaaaagtcaattttacccctta |
21781783 |
T |
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| Q |
113 |
cttgtttgaaagtagttatattggtagcaatcatatgtagctatgagtatagagaatatatgcacccttattttatattagtcctttattgctgccacat |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
21781784 |
cttgtttgaaagtagttatattggtagcaatcatatgtagctatgagtatagagaatatatgcacccttattttatattggtcctttattgctgccacat |
21781883 |
T |
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| Q |
213 |
gtaccttggtattgaacttgtgttagcaattagtgcagcaccggt |
257 |
Q |
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| T |
21781884 |
gtaccttggtattgaacttgtgttagcaattagtgcagcaccggt |
21781928 |
T |
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