View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20665_high_129 (Length: 252)

Name: NF20665_high_129
Description: NF20665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20665_high_129
NF20665_high_129
[»] chr1 (34 HSPs)
chr1 (12-235)||(2470825-2471039)
chr1 (18-162)||(30010335-30010476)
chr1 (18-162)||(35349562-35349703)
chr1 (18-162)||(41498407-41498548)
chr1 (18-157)||(10391880-10392016)
chr1 (25-158)||(2859039-2859169)
chr1 (18-162)||(32951418-32951559)
chr1 (52-162)||(38510024-38510135)
chr1 (18-161)||(51597672-51597812)
chr1 (70-162)||(12234013-12234106)
chr1 (21-162)||(40095036-40095175)
chr1 (73-162)||(26324017-26324112)
chr1 (18-161)||(49946688-49946828)
chr1 (18-130)||(8529834-8529943)
chr1 (99-162)||(12234187-12234251)
chr1 (99-162)||(40094936-40095000)
chr1 (105-162)||(20607401-20607458)
chr1 (105-162)||(30010516-30010573)
chr1 (110-162)||(2858935-2858987)
chr1 (105-161)||(35512981-35513037)
chr1 (99-162)||(38509897-38509961)
chr1 (24-130)||(44211011-44211114)
chr1 (105-162)||(7444481-7444538)
chr1 (19-145)||(42230559-42230681)
chr1 (105-162)||(51303387-51303444)
chr1 (99-162)||(20576136-20576200)
chr1 (18-130)||(50744381-50744490)
chr1 (99-161)||(8529976-8530039)
chr1 (125-162)||(20607226-20607263)
chr1 (105-162)||(35927996-35928053)
chr1 (105-162)||(40709295-40709352)
chr1 (99-162)||(41498581-41498646)
chr1 (126-162)||(1085695-1085731)
chr1 (130-162)||(26941042-26941074)
[»] chr8 (40 HSPs)
chr8 (17-162)||(9718578-9718720)
chr8 (18-162)||(31543172-31543313)
chr8 (18-162)||(7503054-7503195)
chr8 (18-161)||(11575506-11575646)
chr8 (17-130)||(11785561-11785671)
chr8 (18-162)||(1026949-1027089)
chr8 (20-161)||(7979144-7979282)
chr8 (105-162)||(43732871-43732928)
chr8 (99-162)||(16024331-16024394)
chr8 (74-159)||(1281149-1281235)
chr8 (18-162)||(11033422-11033561)
chr8 (70-162)||(13404979-13405072)
chr8 (105-161)||(7394645-7394701)
chr8 (24-162)||(28083745-28083880)
chr8 (23-121)||(41103611-41103706)
chr8 (99-159)||(31543078-31543139)
chr8 (110-159)||(36309032-36309081)
chr8 (25-162)||(42650443-42650572)
chr8 (105-162)||(4247700-4247761)
chr8 (99-162)||(8815318-8815382)
chr8 (99-158)||(34196486-34196544)
chr8 (22-144)||(3726959-3727078)
chr8 (18-131)||(36308876-36308987)
chr8 (70-162)||(37923226-37923320)
chr8 (70-162)||(2248455-2248548)
chr8 (105-162)||(12022327-12022384)
chr8 (99-162)||(3726866-3726930)
chr8 (99-162)||(16653126-16653190)
chr8 (18-162)||(40990284-40990424)
chr8 (123-162)||(16024156-16024195)
chr8 (52-162)||(30479847-30479958)
chr8 (127-162)||(43732682-43732717)
chr8 (18-162)||(6315069-6315206)
chr8 (105-162)||(8815144-8815201)
chr8 (18-127)||(16652987-16653093)
chr8 (117-162)||(41103507-41103552)
chr8 (99-162)||(30365133-30365197)
chr8 (105-141)||(30581997-30582033)
chr8 (18-146)||(31738442-31738567)
chr8 (99-162)||(31738600-31738664)
[»] chr7 (42 HSPs)
chr7 (18-162)||(47390858-47391000)
chr7 (18-162)||(33655208-33655349)
chr7 (25-162)||(1051605-1051739)
chr7 (70-162)||(39856013-39856106)
chr7 (18-162)||(34228418-34228560)
chr7 (18-162)||(25887195-25887336)
chr7 (18-162)||(13771046-13771187)
chr7 (23-162)||(26365770-26365907)
chr7 (18-136)||(41497057-41497172)
chr7 (19-162)||(31571569-31571711)
chr7 (99-159)||(4833537-4833598)
chr7 (105-162)||(37925844-37925901)
chr7 (18-163)||(43230238-43230380)
chr7 (105-162)||(48881561-48881618)
chr7 (18-162)||(24970265-24970406)
chr7 (99-162)||(33519225-33519289)
chr7 (70-163)||(23029482-23029571)
chr7 (105-162)||(36267556-36267613)
chr7 (99-162)||(13770951-13771015)
chr7 (99-162)||(18231763-18231827)
chr7 (18-159)||(41008188-41008325)
chr7 (99-162)||(41496960-41497024)
chr7 (99-162)||(42306507-42306571)
chr7 (123-162)||(28074106-28074145)
chr7 (18-161)||(34235107-34235243)
chr7 (123-162)||(36267755-36267794)
chr7 (105-159)||(40282203-40282257)
chr7 (105-162)||(40196535-40196592)
chr7 (18-131)||(40196632-40196741)
chr7 (126-162)||(31364249-31364285)
chr7 (123-162)||(37620777-37620816)
chr7 (123-162)||(39646472-39646511)
chr7 (111-162)||(45940659-45940710)
chr7 (18-84)||(22163209-22163271)
chr7 (18-84)||(22221917-22221979)
chr7 (102-155)||(35422145-35422198)
chr7 (99-162)||(13425123-13425187)
chr7 (99-146)||(25887370-25887418)
chr7 (18-130)||(37417733-37417842)
chr7 (99-162)||(47391033-47391097)
chr7 (70-146)||(48013522-48013598)
chr7 (130-162)||(48881758-48881790)
[»] scaffold0067 (2 HSPs)
scaffold0067 (18-162)||(39287-39431)
scaffold0067 (99-162)||(39189-39254)
[»] chr2 (37 HSPs)
chr2 (18-162)||(36347641-36347782)
chr2 (18-162)||(15224794-15224935)
chr2 (18-162)||(36566951-36567093)
chr2 (17-162)||(9426988-9427130)
chr2 (22-160)||(8426975-8427110)
chr2 (70-162)||(35736178-35736271)
chr2 (18-162)||(2241414-2241554)
chr2 (18-162)||(39732829-39732969)
chr2 (70-162)||(41841685-41841778)
chr2 (52-162)||(41778776-41778887)
chr2 (105-159)||(31061544-31061598)
chr2 (70-162)||(3094501-3094594)
chr2 (117-162)||(17379849-17379894)
chr2 (17-162)||(19566920-19567057)
chr2 (105-162)||(22356188-22356245)
chr2 (105-162)||(23748279-23748336)
chr2 (105-162)||(36046386-36046442)
chr2 (99-162)||(17380018-17380082)
chr2 (31-114)||(40022422-40022501)
chr2 (70-146)||(39821688-39821765)
chr2 (105-162)||(42296487-42296544)
chr2 (105-162)||(45257491-45257548)
chr2 (53-120)||(28262574-28262642)
chr2 (99-162)||(34187578-34187642)
chr2 (100-162)||(35736365-35736428)
chr2 (100-146)||(17331434-17331480)
chr2 (125-159)||(31795968-31796002)
chr2 (105-146)||(887294-887335)
chr2 (105-146)||(1052773-1052814)
chr2 (105-162)||(31061362-31061419)
chr2 (105-162)||(42813804-42813861)
chr2 (99-162)||(9631737-9631801)
chr2 (17-49)||(17379925-17379957)
chr2 (18-130)||(23748130-23748239)
chr2 (99-162)||(31795772-31795836)
chr2 (99-162)||(36046207-36046271)
chr2 (99-162)||(40022550-40022614)
[»] chr5 (46 HSPs)
chr5 (18-162)||(13634714-13634855)
chr5 (18-162)||(26414896-26415037)
chr5 (17-162)||(7544139-7544281)
chr5 (25-161)||(2550459-2550592)
chr5 (19-163)||(14681472-14681612)
chr5 (18-161)||(10072747-10072887)
chr5 (53-162)||(16938482-16938592)
chr5 (18-162)||(28279576-28279718)
chr5 (105-162)||(14245091-14245148)
chr5 (99-162)||(1657990-1658054)
chr5 (99-162)||(13634888-13634952)
chr5 (18-162)||(10476029-10476172)
chr5 (70-162)||(40815300-40815393)
chr5 (99-162)||(14245223-14245287)
chr5 (70-160)||(36363037-36363128)
chr5 (53-162)||(22022850-22022963)
chr5 (99-162)||(34980813-34980877)
chr5 (105-160)||(11436944-11436999)
chr5 (18-161)||(11756882-11757021)
chr5 (18-160)||(36392250-36392388)
chr5 (22-135)||(9798716-9798826)
chr5 (113-162)||(10476220-10476269)
chr5 (99-163)||(11757080-11757145)
chr5 (125-162)||(20147074-20147111)
chr5 (105-162)||(33744196-33744253)
chr5 (105-162)||(42681451-42681508)
chr5 (18-162)||(4373666-4373807)
chr5 (99-162)||(7544313-7544377)
chr5 (18-130)||(9856915-9857024)
chr5 (99-162)||(10650591-10650655)
chr5 (123-162)||(5688592-5688631)
chr5 (127-162)||(12035939-12035974)
chr5 (123-162)||(40305867-40305906)
chr5 (124-162)||(8551621-8551659)
chr5 (100-162)||(10204755-10204817)
chr5 (100-162)||(15986627-15986689)
chr5 (124-162)||(21581150-21581188)
chr5 (99-160)||(36363209-36363271)
chr5 (105-162)||(10204579-10204636)
chr5 (105-162)||(14684668-14684725)
chr5 (105-162)||(15986808-15986865)
chr5 (105-162)||(37551589-37551646)
chr5 (105-162)||(37654419-37654476)
chr5 (125-162)||(40305673-40305710)
chr5 (99-162)||(8502838-8502902)
chr5 (99-162)||(16938656-16938720)
[»] chr4 (47 HSPs)
chr4 (18-162)||(31348421-31348562)
chr4 (18-162)||(46007801-46007942)
chr4 (52-162)||(54935070-54935182)
chr4 (17-162)||(54320438-54320579)
chr4 (18-162)||(26166940-26167081)
chr4 (18-162)||(45741893-45742034)
chr4 (18-162)||(1968459-1968600)
chr4 (17-161)||(27735749-27735890)
chr4 (18-163)||(16400802-16400944)
chr4 (52-162)||(47433838-47433950)
chr4 (71-162)||(29798291-29798383)
chr4 (19-162)||(37711141-37711286)
chr4 (99-162)||(49735471-49735535)
chr4 (18-162)||(5730930-5731072)
chr4 (99-162)||(54935246-54935310)
chr4 (72-162)||(2247952-2248042)
chr4 (100-162)||(41174524-41174586)
chr4 (116-162)||(49735687-49735733)
chr4 (23-152)||(6891373-6891499)
chr4 (70-146)||(49735616-49735692)
chr4 (117-162)||(54320630-54320675)
chr4 (105-162)||(54576330-54576387)
chr4 (105-162)||(56135752-56135809)
chr4 (20-109)||(35248743-35248828)
chr4 (18-95)||(36151647-36151720)
chr4 (99-162)||(37711300-37711364)
chr4 (107-158)||(35565565-35565616)
chr4 (99-159)||(6938287-6938348)
chr4 (23-159)||(17938212-17938346)
chr4 (98-162)||(21695064-21695129)
chr4 (70-162)||(22920984-22921077)
chr4 (70-162)||(22970722-22970815)
chr4 (105-162)||(45132679-45132736)
chr4 (105-162)||(47846240-47846297)
chr4 (105-162)||(47846447-47846504)
chr4 (18-95)||(2917063-2917136)
chr4 (99-162)||(6938424-6938488)
chr4 (123-162)||(44145776-44145815)
chr4 (124-162)||(53260721-53260759)
chr4 (105-162)||(7977681-7977738)
chr4 (105-146)||(21694909-21694950)
chr4 (123-160)||(34110803-34110840)
chr4 (105-162)||(34995233-34995290)
chr4 (99-162)||(24565349-24565413)
chr4 (126-162)||(27735950-27735986)
chr4 (98-157)||(35248862-35248922)
chr4 (99-162)||(45742067-45742131)
[»] chr3 (38 HSPs)
chr3 (18-162)||(41110421-41110562)
chr3 (18-162)||(24560220-24560361)
chr3 (18-159)||(21773788-21773926)
chr3 (18-164)||(27542031-27542174)
chr3 (19-160)||(14897981-14898119)
chr3 (52-162)||(25655102-25655213)
chr3 (52-161)||(46204890-46205000)
chr3 (74-162)||(28582661-28582750)
chr3 (99-161)||(55428556-55428619)
chr3 (18-162)||(18654700-18654842)
chr3 (70-142)||(30200239-30200312)
chr3 (105-162)||(34641174-34641231)
chr3 (99-162)||(41110324-41110388)
chr3 (70-159)||(220545-220635)
chr3 (56-127)||(651769-651841)
chr3 (108-162)||(5903552-5903606)
chr3 (105-163)||(6803385-6803443)
chr3 (105-162)||(24253906-24253963)
chr3 (105-146)||(26135981-26136022)
chr3 (99-159)||(27541937-27541998)
chr3 (105-161)||(12790377-12790432)
chr3 (105-161)||(17474390-17474446)
chr3 (126-162)||(21090276-21090312)
chr3 (99-162)||(24560394-24560458)
chr3 (99-162)||(28581189-28581253)
chr3 (111-162)||(14897898-14897949)
chr3 (105-144)||(25654991-25655030)
chr3 (123-162)||(42772047-42772086)
chr3 (123-162)||(44412563-44412602)
chr3 (18-120)||(52185060-52185160)
chr3 (124-162)||(24253724-24253762)
chr3 (18-160)||(52473920-52474059)
chr3 (105-162)||(17474209-17474266)
chr3 (18-135)||(41040050-41040164)
chr3 (125-161)||(31664391-31664427)
chr3 (125-161)||(31931969-31932005)
chr3 (130-162)||(37102348-37102380)
chr3 (99-146)||(52474092-52474140)
[»] scaffold0096 (1 HSPs)
scaffold0096 (52-162)||(6587-6698)
[»] chr6 (31 HSPs)
chr6 (19-162)||(19278139-19278278)
chr6 (52-162)||(12811110-12811221)
chr6 (18-162)||(4097612-4097754)
chr6 (18-162)||(30487405-30487546)
chr6 (18-162)||(31849113-31849254)
chr6 (18-162)||(33235954-33236095)
chr6 (99-162)||(9721141-9721205)
chr6 (18-162)||(21606944-21607085)
chr6 (105-162)||(10818232-10818289)
chr6 (105-162)||(14515476-14515533)
chr6 (99-162)||(9719034-9719098)
chr6 (99-162)||(10818393-10818457)
chr6 (52-162)||(33041473-33041584)
chr6 (105-163)||(26318489-26318547)
chr6 (54-162)||(2893633-2893742)
chr6 (72-164)||(30850062-30850155)
chr6 (99-162)||(23090998-23091062)
chr6 (105-157)||(23091143-23091195)
chr6 (110-162)||(30487309-30487361)
chr6 (70-159)||(16738144-16738233)
chr6 (105-162)||(9719214-9719271)
chr6 (98-162)||(16737999-16738064)
chr6 (126-162)||(15323228-15323264)
chr6 (126-162)||(15353367-15353403)
chr6 (23-162)||(2892708-2892844)
chr6 (123-162)||(9051734-9051773)
chr6 (99-160)||(19278039-19278101)
chr6 (98-162)||(665844-665908)
chr6 (105-162)||(4097238-4097295)
chr6 (98-162)||(14515647-14515712)
chr6 (105-146)||(34176590-34176631)
[»] scaffold0026 (1 HSPs)
scaffold0026 (71-162)||(1175-1267)
[»] scaffold0198 (1 HSPs)
scaffold0198 (105-162)||(3150-3207)
[»] scaffold0007 (1 HSPs)
scaffold0007 (105-161)||(242400-242456)
[»] scaffold0262 (2 HSPs)
scaffold0262 (18-128)||(16396-16503)
scaffold0262 (98-159)||(16302-16364)
[»] scaffold0240 (1 HSPs)
scaffold0240 (105-162)||(17724-17779)
[»] scaffold0012 (1 HSPs)
scaffold0012 (105-161)||(184791-184847)


Alignment Details
Target: chr1 (Bit Score: 178; Significance: 4e-96; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 12 - 235
Target Start/End: Original strand, 2470825 - 2471039
Alignment:
Q  12 aaaatgcatattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattt-aaaaag 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  2470825 aaaatgcatattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacatgttatatagttgataatttaaaaaag 2470924  T
Q  111 aaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacacaaggttattacacccctatttaatccacaaactgcatgattggatttg 210  Q
    |||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2470925 aaaagtaaa----------ccttcccctcctaaaccatcaatccaaacacacaaggttattacacccctatttaatccacaaactgcatgattggatttg 2471014  T
Q  211 cagtgagtttgctagaatcgcaatg 235  Q
    |||||||||||||||||||||||||    
T  2471015 cagtgagtttgctagaatcgcaatg 2471039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 30010476 - 30010335
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaa-aagaaaagt 116  Q
    ||||||||||| ||||||  ||||||||||||||    || |||| ||| | ||||||||||||||| ||||||||||   ||||||||| |||||||||    
T  30010476 catattaacattataaacgatcatataatacttc----aaccacacttaatttattttagaaaaacatgttatatagtccgtaatttaaacaagaaaagt 30010381  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||| | |||||||||||||||||||||||| |||||||||||||||    
T  30010380 aaatcctcccctcccttcccctcctaaaccctcaatccaaacacac 30010335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 35349562 - 35349703
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    ||||||||||||||||||| ||||||||||||||    ||| ||  ||||| ||||||||||||| | ||||||||||   ||||||||||| |||||||    
T  35349562 catattaacatgataaacaatcatataatacttc----aataacccttagtttattttagaaaaaaatgttatatagtccgtaatttaaaaacgaaaagt 35349657  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| ||||||||||||||||| |||||| | |||||||||||||    
T  35349658 aaaccctcccctcccttcccctcataaacccttaatccaaacacac 35349703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 41498548 - 41498407
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    ||||||||||||||||||  ||||||||||||||    ||||||| |||   |||  ||||||| || |||| |||||| |||||||||||| |||||||    
T  41498548 catattaacatgataaacgatcatataatacttc----aatcacacttaacttatcgtagaaaatcatgttaaatagttcataatttaaaaacgaaaagt 41498453  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| ||||||| |||||||||||||||| |||||||||||||||    
T  41498452 aaaccctcccctcacttcccctcctaaaccctcaatccaaacacac 41498407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 157
Target Start/End: Complemental strand, 10392016 - 10391880
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    |||||||||||||||||| ||||||||||||||     ||||||||||| | ||||||||||||||| || |||||||   ||||||||||| |||||||    
T  10392016 catattaacatgataaacggtcatataatacttt----aatcacaattaatttattttagaaaaacatgtaatatagtccgtaatttaaaaatgaaaagt 10391921  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaa 157  Q
    ||||| |||||||  ||||||||||||| | ||||||||||    
T  10391920 aaaccctcccctcgtttcccctcctaaaacctcaatccaaa 10391880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 158
Target Start/End: Original strand, 2859039 - 2859169
Alignment:
Q  25 acatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaag-aaaagtaaacctt 123  Q
    |||| ||||||| ||||||||||||||    ||||||| ||| | |||||| |||||||| ||||||||||   |||||||||||  ||||||||||| |    
T  2859039 acattataaacaatcatataatacttc----aatcacacttaatttatttttgaaaaacatgttatatagtccgtaatttaaaaaataaaagtaaaccct 2859134  T
Q  124 cccctcccttcccctcctaaaccatcaatccaaac 158  Q
    ||||||||||||||||||||||| |||||||||||    
T  2859135 cccctcccttcccctcctaaaccttcaatccaaac 2859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 32951418 - 32951559
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    ||||||||||||||||||  || |||||||||||    ||||||| ||| | ||||||||||||||| ||| ||||||   ||||||||||| |||||||    
T  32951418 catattaacatgataaacgatcgtataatacttc----aatcacacttaatttattttagaaaaacatgttctatagtccgtaatttaaaaacgaaaagt 32951513  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||  ||||||||||||| |||||||||  |||||||||||||||    
T  32951514 aaactctcccctcccttcctctcctaaactctcaatccaaacacac 32951559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 52 - 162
Target Start/End: Original strand, 38510024 - 38510135
Alignment:
Q  52 cttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatca 150  Q
    ||||||||||| ||  | ||||||||||||||| ||||||||||   || |||||||| ||||| |||||| |||||||||||||||||||||||| | |    
T  38510024 cttcaatcacacttgatttattttagaaaaacatgttatatagtccgtagtttaaaaaagaaaactaaaccctcccctcccttcccctcctaaaccctta 38510123  T
Q  151 atccaaacacac 162  Q
    ||||||||||||    
T  38510124 atccaaacacac 38510135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 51597812 - 51597672
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    |||||||| |||||||||| ||||||||||||||    ||||||| ||| | ||||||| ||||||| ||||||||||   | ||||||||| |||||||    
T  51597812 catattaagatgataaacaatcatataatacttc----aatcacacttaatttattttaaaaaaacatgttatatagtccgtgatttaaaaaagaaaagt 51597717  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacaca 161  Q
    ||||  |||||||||||||  || |||||| ||||||||||||||    
T  51597716 aaactctcccctcccttcctttcataaaccctcaatccaaacaca 51597672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 12234106 - 12234013
Alignment:
Q  70 tattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||| ||||||||||   ||||||||||| ||||| ||| || | |||||||||||||||||||||| |||||||||||||||    
T  12234106 tattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaattaagccctaccctcccttcccctcctaaaccctcaatccaaacacac 12234013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 162
Target Start/End: Original strand, 40095036 - 40095175
Alignment:
Q  21 attaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaa-caagttatatagttgataatttaaaaa-gaaaagtaa 118  Q
    |||||||||||||||  ||||||||||||||    ||||||| ||| | ||||||||||||| || ||||||||||   ||||||||||| |||||||||    
T  40095036 attaacatgataaacgatcatataatacttc----aatcacacttaatttattttagaaaaaacatgttatatagtctgtaatttaaaaacgaaaagtaa 40095131  T
Q  119 accttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||| | || ||||||  ||| ||||||| |||||||||||||||    
T  40095132 acccttccttcccttttccttctaaaccctcaatccaaacacac 40095175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 73 - 162
Target Start/End: Complemental strand, 26324112 - 26324017
Alignment:
Q  73 tttagaaaaacaagttatatagttgataattta-aaaagaaaagtaaa-----ccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||| |||||||||||| ||||||| |||||||||  |||     || |||||||||||||||||||||||| |||||||||||||||    
T  26324112 tttagaaaaacatgttatatagttggtaatttaaaaaagaaaatcaaaccctcccctcccctcccttcccctcctaaaccctcaatccaaacacac 26324017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 49946688 - 49946828
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaa-aagaaaagt 116  Q
    |||||||||||||||||   ||||||||||||||    ||||||| ||| | ||||||| ||||||| ||||||||||   |  |||||| |||||||||    
T  49946688 catattaacatgataaattatcatataatacttc----aatcacatttaatttattttaaaaaaacatgttatatagtctctggtttaaacaagaaaagt 49946783  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacaca 161  Q
    ||||| || | |||||||||| ||||| || ||||||||||||||    
T  49946784 aaaccctcacatcccttccccgcctaatccctcaatccaaacaca 49946828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 8529943 - 8529834
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattta-aaaagaaaagt 116  Q
    |||||||||||| |||||  ||||||||||||||    ||||||| ||| | ||||| | ||||||| |||||||||||  ||||||| |||||||||||    
T  8529943 catattaacatggtaaacgatcatataatacttc----aatcacacttaatttatttaaaaaaaacatgttatatagtttgtaatttaaaaaagaaaagt 8529848  T
Q  117 aaaccttcccctcc 130  Q
    ||||| ||||||||    
T  8529847 aaaccctcccctcc 8529834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 12234187 - 12234251
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||| |||||| |||||||||||||||||||||||| || ||||||||||||    
T  12234187 taatttaaaaatgaaaactaaaccctcccctcccttcccctcctaaaccctccatccaaacacac 12234251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 40095000 - 40094936
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| |||||||||||| |||||| ||||||||||||||||| || ||||||||||||    
T  40095000 taatttaaaaatgaaaagtaaaccctccccttccttcccctcctaaaccctccatccaaacacac 40094936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 20607401 - 20607458
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| || |||||||| |||||||||||||||||||||||| || ||||||||||||    
T  20607401 aaaaaaaatagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacac 20607458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 30010516 - 30010573
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||| |||||||||||| |||||||||||||||| ||||||| || ||||||||||||    
T  30010516 aaaatgaaaagtaaaccctcccctcccttccccttctaaaccctccatccaaacacac 30010573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 2858987 - 2858935
Alignment:
Q  110 gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||| ||||||||||| |||||||||||| || ||||||||||||    
T  2858987 gaaaagtaaaccctcccctccctttccctcctaaaccctccatccaaacacac 2858935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 35512981 - 35513037
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacaca 161  Q
    ||||| |||||||| || |||||||||||||||||||||||| || |||||||||||    
T  35512981 aaaaataaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacaca 35513037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 38509961 - 38509897
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||||| |||| ||| |||||||||||||||||||| || ||||||||||||    
T  38509961 taatttaaaaatgaaaagtgaaccctcctctcccttcccctcctaaaccctctatccaaacacac 38509897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 130
Target Start/End: Original strand, 44211011 - 44211114
Alignment:
Q  24 aacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattta-aaaagaaaagtaaacct 122  Q
    ||||||||||||  ||||||||||||||    ||||||| ||| | ||||||||||||||| |||||||||    ||||||| |||||||| ||||| ||    
T  44211011 aacatgataaacgatcatataatacttc----aatcacacttaatttattttagaaaaacacgttatatagactgtaatttataaaagaaatgtaaatct 44211106  T
Q  123 tcccctcc 130  Q
    ||||||||    
T  44211107 tcccctcc 44211114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 7444538 - 7444481
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||||| |||| ||||||| ||||| ||||| ||||||| |||||||    
T  7444538 aaaaagaaaagtaaaccctcccttcccttctcctcccaaaccctcaatcctaacacac 7444481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 145
Target Start/End: Complemental strand, 42230681 - 42230559
Alignment:
Q  19 atattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaagaaaagtaa 118  Q
    |||||||||| ||||||| ||||||||||||||    ||||||| ||| | ||||||  ||||||| |||| ||| |  ||||||| |||| ||||||||    
T  42230681 atattaacataataaacaatcatataatacttc----aatcacacttaatttatttttaaaaaacatgttaaataatcaataattttaaaaaaaaagtaa 42230586  T
Q  119 accttcccctcccttcccctcctaaac 145  Q
    |   ||||||| ||| |||||||||||    
T  42230585 attctcccctcactttccctcctaaac 42230559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 51303444 - 51303387
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| |||||| | || ||||||||| |||||||||||||| |||||||||||||||    
T  51303444 aaaaataaaagtgagccctcccctcccctcccctcctaaaccctcaatccaaacacac 51303387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 20576200 - 20576136
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||  |||||  |||||||||||||||||||||||| || ||||||||||||    
T  20576200 taatttaaaaatgaaatctaaactctcccctcccttcccctcctaaaccctctatccaaacacac 20576136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 50744381 - 50744490
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattt-aaaaagaaaagt 116  Q
    ||||||||||||||||||  ||||||||||    ||||||||||| ||| | ||||||||| ||||  ||||||||||   |||||| ||||||||||      
T  50744381 catattaacatgataaacgatcatataata----cttcaatcacacttaatttattttagagaaacctgttatatagtccgtaatttaaaaaagaaaaac 50744476  T
Q  117 aaaccttcccctcc 130  Q
    ||||| ||||||||    
T  50744477 aaaccctcccctcc 50744490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 8529976 - 8530039
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacaca 161  Q
    ||||||||||| ||||||||||| ||| ||||||||||||||||||||  |  |||||||||||    
T  8529976 taatttaaaaatgaaaagtaaactttcacctcccttcccctcctaaactcttcatccaaacaca 8530039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 20607263 - 20607226
Alignment:
Q  125 ccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  20607263 ccctcccttcccctcctaaaccctcaattcaaacacac 20607226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 35927996 - 35928053
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||| | ||||  |||||||||| |||| || |||||||||||||||    
T  35927996 aaaaagaaaagtaaatcatccctccccttccccttctaagccctcaatccaaacacac 35928053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 40709352 - 40709295
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||  | ||| ||||||||||||| |||||| | |||||||||||||    
T  40709352 aaaaagaaaagtaagtcctcctctcccttcccctcttaaaccttaaatccaaacacac 40709295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 41498581 - 41498646
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctccctt-cccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| |||||||||| | ||||||||||| ||||||||||||  || ||||||||||||    
T  41498581 taatttaaaaatgaaaagtaaatcctcccctcccttacccctcctaaactctccatccaaacacac 41498646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 1085695 - 1085731
Alignment:
Q  126 cctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||||||||| || ||||||||||||    
T  1085695 cctcccttcccctcctaaaccctctatccaaacacac 1085731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 26941042 - 26941074
Alignment:
Q  130 ccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||||| |||||||||||||||    
T  26941042 ccttcccctcctaaaccctcaatccaaacacac 26941074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 3e-41; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 9718578 - 9718720
Alignment:
Q  17 gcatattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaa-agaaaag 115  Q
    |||||||||||||||||||| ||||||||||||||    ||||||||||| || |||||||||||| | ||||||||||| ||||||||||| |||||||    
T  9718578 gcatattaacatgataaacaatcatataatacttc----aatcacaattaatgaattttagaaaaatatgttatatagttcataatttaaaaaagaaaag 9718673  T
Q  116 taaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  9718674 taaactttcccctcccttctcctcctaaaccctcaatccaaacacac 9718720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 31543172 - 31543313
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaa-agaaaagt 116  Q
    ||||||||||| |||||| |||||||||||||||    ||||||| ||| | ||||||||||||||| ||||||| ||  ||||||||||| ||||||||    
T  31543172 catattaacatcataaacggtcatataatacttc----aatcacacttaatttattttagaaaaacatgttatatggtccataatttaaaaaagaaaagt 31543267  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| |||||||||||||||||||||||| |||||| ||||||||    
T  31543268 aaaccctcccctcccttcccctcctaaaccctcaatcgaaacacac 31543313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 7503054 - 7503195
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    ||||||||||||||||||| |||||||||||||     ||||||| ||| | ||||||||||||||| |||||||| |  |||||||||||| |||||||    
T  7503054 catattaacatgataaacaatcatataatacttt----aatcacacttaatttattttagaaaaacatgttatataatccataatttaaaaacgaaaagt 7503149  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| ||||||||| |||||||| ||| | |||||||||||||||    
T  7503150 aaaccctcccctcccctcccctcccaaagcctcaatccaaacacac 7503195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 11575506 - 11575646
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    ||||||||||||||||||  |||||||||||||     ||||||| ||| | ||||||||||||||| |||||||| ||  ||||||||||| |||||||    
T  11575506 catattaacatgataaacgatcatataatacttt----aatcacacttaatttattttagaaaaacatgttatataatttgtaatttaaaaatgaaaagt 11575601  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacaca 161  Q
    ||||| |||||||||||| | ||||||||| | ||||||||||||    
T  11575602 aaaccctcccctcccttctcatcctaaaccctgaatccaaacaca 11575646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 130
Target Start/End: Complemental strand, 11785671 - 11785561
Alignment:
Q  17 gcatattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattta-aaaagaaaag 115  Q
    ||||||||||||||||||||  |||||||||||||    |||| |||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||    
T  11785671 gcatattaacatgataaacaaacatataatacttc----aatcgcaattaatgtattttagaaaaacatgttatatagttcataatttaaaaaagaaaag 11785576  T
Q  116 taaaccttcccctcc 130  Q
    |||||  ||||||||    
T  11785575 taaactctcccctcc 11785561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 1026949 - 1027089
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaa-agaaaagt 116  Q
    ||||||||||||||||||  ||||||||||||||    ||||| | ||| | |||||||||||||||  |||||||||   |||||||||| ||||||||    
T  1026949 catattaacatgataaacgatcatataatacttc----aatcatacttaatttattttagaaaaacat-ttatatagtccgtaatttaaaaaagaaaagt 1027043  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
     |||| | |||||||||||| ||||||||| | |||||||||||||    
T  1027044 gaacccttccctcccttcccttcctaaacccttaatccaaacacac 1027089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 7979282 - 7979144
Alignment:
Q  20 tattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaa 118  Q
    ||||||||||||||| | ||||||||||||||    |||  || ||  | ||||||||||||||| ||||||||||   ||||||||||| |||||||||    
T  7979282 tattaacatgataaataatcatataatacttc----aattgcacttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaa 7979187  T
Q  119 accttcccctcccttcccctcctaaaccatcaatccaaacaca 161  Q
    ||  ||| ||||||||| || ||||||| ||||||||||||||    
T  7979186 actctcctctcccttcctcttctaaaccctcaatccaaacaca 7979144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 43732871 - 43732928
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  43732871 aaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacac 43732928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 16024331 - 16024394
Alignment:
Q  99 taatttaaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||||||||||  |||||||||||||||||||||| | || ||||||||||||    
T  16024331 taatttaaaaagaaaagtaaactctcccctcccttcccctcctaaatcctccatccaaacacac 16024394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 74 - 159
Target Start/End: Complemental strand, 1281235 - 1281149
Alignment:
Q  74 ttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaaca 159  Q
    ||||||||||| ||||||| ||   ||||||||||| |||||||||||| || | ||||||||||||||||||| ||||||||||||    
T  1281235 ttagaaaaacatgttatatcgtccgtaatttaaaaaagaaaagtaaaccctctcatcccttcccctcctaaaccctcaatccaaaca 1281149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 11033561 - 11033422
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    ||||||||||||||||||  |||||||||  |||    |||||||  || | ||||||||||||||| | ||||||||   | ||||||||| |||||||    
T  11033561 catattaacatgataaacgatcatataattattc----aatcacacataatttattttagaaaaacatgatatatagtccgttatttaaaaaagaaaagt 11033466  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||  |||||||||||| || ||||||| |||||||||||||||    
T  11033465 aaacc--cccctcccttcctcttctaaaccctcaatccaaacacac 11033422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 13405072 - 13404979
Alignment:
Q  70 tattttagaaaaacaagttatatagt-tgataatttaaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||| |||||||||| || || || ||||||||||||||    |||| ||||||||||||||||||| ||||||||| |||||    
T  13405072 tattttagaaaaacatgttatatagtctgttatttaaaaaagaaaagtaatttctcccatcccttcccctcctaaaccctcaatccaaccacac 13404979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 7394645 - 7394701
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacaca 161  Q
    ||||| |||||| |||| |||||||||||||||||||||||| ||||||||||||||    
T  7394645 aaaaataaaagtgaaccatcccctcccttcccctcctaaaccctcaatccaaacaca 7394701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 162
Target Start/End: Complemental strand, 28083880 - 28083745
Alignment:
Q  24 aacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaacct 122  Q
    ||||||||||||| |||||||||||| |    ||||||| ||| | ||||||||| ||||| ||||||| ||   ||||||||||| |||||  |||       
T  28083880 aacatgataaacaatcatataatactcc----aatcacacttaatttattttagagaaacatgttatattgtctgtaatttaaaaaagaaaaacaaaatc 28083785  T
Q  123 tcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    || ||||||||||||||||||||| ||||||| |||||||    
T  28083784 tctcctcccttcccctcctaaaccctcaatccgaacacac 28083745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 41103611 - 41103706
Alignment:
Q  23 taacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattt-aaaaagaaaagtaaacc 121  Q
    |||||||||||||  ||||||||||||||    ||||||| ||| | ||||||||||||||| ||||||||| |  |||||| |||||||||||||||||    
T  41103611 taacatgataaacgatcatataatacttc----aatcacacttaatttattttagaaaaacatgttatatagcttgtaatttaaaaaagaaaagtaaacc 41103706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 31543139 - 31543078
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaaca 159  Q
    ||||||||||| |||||||||||| ||||||||||||||||| |||||| || |||||||||    
T  31543139 taatttaaaaatgaaaagtaaaccctcccctcccttcccctcttaaaccctccatccaaaca 31543078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 36309032 - 36309081
Alignment:
Q  110 gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaaca 159  Q
    |||||||||||| |||||||||||||||||||||||| || |||||||||    
T  36309032 gaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaaca 36309081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 42650443 - 42650572
Alignment:
Q  25 acatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaacctt 123  Q
    |||||||||||| ||||||||||||||    ||||||| ||| | ||||||||||||||| |||||||| |   ||||||||||| ||||||||||        
T  42650443 acatgataaacaatcatataatacttc----aatcacacttaatttattttagaaaaacatgttatatattccgtaatttaaaaacgaaaagtaaa---- 42650534  T
Q  124 cccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
     | ||||||||| |||| ||||| |||||| ||||||||    
T  42650535 -ctctcccttcctctcccaaaccctcaatctaaacacac 42650572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 4247700 - 4247761
Alignment:
Q  105 aaaaagaaaagtaaaccttcc----cctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||||| |||    ||||||||||||||||||||| |||||||||||||||    
T  4247700 aaaaagaaaagtaaaccctcctctacctcccttcccctcctaaaccttcaatccaaacacac 4247761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 8815318 - 8815382
Alignment:
Q  99 taatttaaaaag-aaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||  |||||| |||| |||||||||| ||||||||||||| |||||||||||||||    
T  8815318 taatttaaaaattaaaagtgaaccctcccctccctccccctcctaaaccctcaatccaaacacac 8815382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 34196486 - 34196544
Alignment:
Q  99 taatttaaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaac 158  Q
    |||||||||||||||||||| || ||||| |||||||||||||||||| || ||||||||    
T  34196486 taatttaaaaagaaaagtaagccctcccc-cccttcccctcctaaaccctccatccaaac 34196544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 144
Target Start/End: Original strand, 3726959 - 3727078
Alignment:
Q  22 ttaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaa-agaaaagtaaac 120  Q
    |||||||||||||| ||||||||||| |||    |||||   ||| | ||||||||||||||| ||||||||||   |||| ||||| ||||||||||||    
T  3726959 ttaacatgataaacggtcatataatatttc----aatcatgcttaatttattttagaaaaacatgttatatagtctgtaatctaaaaaagaaaagtaaac 3727054  T
Q  121 cttcccctcccttcccctcctaaa 144  Q
      || |||||||| ||||||||||    
T  3727055 tctcacctccctttccctcctaaa 3727078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 36308987 - 36308876
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtatttta-gaaaaacaagttatatagttgataatttaa-aaagaaaag 115  Q
    ||||||||||||||||||| ||||||||||    ||||||||||| ||||| |||||||  ||||||| ||||||||||   || ||||| ||||||||     
T  36308987 catattaacatgataaacaatcatataata----cttcaatcacacttagtttattttataaaaaacatgttatatagtctctagtttaacaaagaaaaa 36308892  T
Q  116 taaaccttcccctccc 131  Q
    | |||| |||||||||    
T  36308891 tgaaccctcccctccc 36308876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 37923226 - 37923320
Alignment:
Q  70 tattttagaaaaacaagttatatagttgataatttaaaaagaaa-agtaaaccttcccctcccttccc-ctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||| ||||||||||   ||||||||||| ||| | |||||| | || ||||||||| |||||||||| | |||||||||||||    
T  37923226 tattttagaaaaacatgttatatagtctgtaatttaaaaataaatattaaacccttccatcccttccctctcctaaacccttaatccaaacacac 37923320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 2248548 - 2248455
Alignment:
Q  70 tattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||| ||||||||     ||||||||||| | ||| | |||  |||||||||||||||||||||||  |||||||||||||||    
T  2248548 tattttagaaaaacatgttatataaaccgtaatttaaaaaaggaaattgaactctcccctcccttcccctcctaaactctcaatccaaacacac 2248455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 12022327 - 12022384
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| |||||| | || |||||||| ||||||||||||||| |||||||||||||||    
T  12022327 aaaaataaaagtgagccctcccctcctttcccctcctaaaccctcaatccaaacacac 12022384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 3726930 - 3726866
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||| |||||| |||  ||||||||||||||||||| || ||||||||||||    
T  3726930 taatttaaaaatgaaaaataaaccgtcctttcccttcccctcctaaaccctccatccaaacacac 3726866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 16653126 - 16653190
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||| |||||| || |||||||||||||| ||||||||  ||||||||||||    
T  16653126 taatttaaaaatgaaaattaaaccctctcctcccttcccctcttaaaccattcatccaaacacac 16653190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 40990284 - 40990424
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattt-aaaaagaaaagt 116  Q
    |||||||||||||||| |  ||||||||||    ||||||||| | ||| | ||||||| | ||||| ||||||||||   |||||| ||||||||||      
T  40990284 catattaacatgataagcgatcatataata----cttcaatcagacttaatttattttaaagaaacatgttatatagtccgtaatttaaaaaagaaaaac 40990379  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||  || |||||||||| ||||| |||| |||||||||||||||    
T  40990380 aaactctctcctcccttcctctcct-aaccctcaatccaaacacac 40990424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 16024195 - 16024156
Alignment:
Q  123 tcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||||| ||||||||| |||||||||||||||    
T  16024195 tcccctcccttcccttcctaaaccctcaatccaaacacac 16024156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 162
Target Start/End: Original strand, 30479847 - 30479958
Alignment:
Q  52 cttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatca 150  Q
    ||||||||||| ||  | ||||||||||||||| |  |||||||   || |||||||| ||||| |||||| ||| |||| |||| ||| |||||| |||    
T  30479847 cttcaatcacacttgatttattttagaaaaacatgacatatagtctgtagtttaaaaaagaaaactaaaccctccgctccattcctctcataaaccctca 30479946  T
Q  151 atccaaacacac 162  Q
    ||||||||||||    
T  30479947 atccaaacacac 30479958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 43732717 - 43732682
Alignment:
Q  127 ctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||||||||||| |||||||||||||||    
T  43732717 ctcccttcccctcctaaaccctcaatccaaacacac 43732682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 6315206 - 6315069
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaagaaaagta 117  Q
    ||||||||| ||||||||  || |||||||||||    ||||||| ||| | ||||||||||||||| ||||||||||   |||||  |||| ||| |||    
T  6315206 catattaacttgataaacgatcgtataatacttc----aatcacacttaatttattttagaaaaacatgttatatagtccgtaatt--aaaaaaaatgta 6315113  T
Q  118 aaccttcc-cctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||  |||| ||  ||||| ||||||||||| |||||||||||||||    
T  6315112 aa--ttcctccctccttcgcctcctaaaccctcaatccaaacacac 6315069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 8815201 - 8815144
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||  | || |||| |||||||||||||||| || ||||||||||||    
T  8815201 aaaaagaaaagtaagtcatcacctctcttcccctcctaaaccctccatccaaacacac 8815144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 127
Target Start/End: Complemental strand, 16653093 - 16652987
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattta-aaaagaaaagt 116  Q
    ||||||||||  ||||||  ||||||||||||||    ||||||| ||  | ||||||| ||||||| ||||||||||   ||||||| |||||||||||    
T  16653093 catattaacaaaataaacgatcatataatacttc----aatcacacttgatttattttataaaaacatgttatatagtccgtaatttaaaaaagaaaagt 16652998  T
Q  117 aaaccttcccc 127  Q
    ||||| |||||    
T  16652997 aaaccctcccc 16652987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 41103552 - 41103507
Alignment:
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| ||||||| |||||||||||||||| || ||||||||||||    
T  41103552 aaaccctcccctctcttcccctcctaaaccctccatccaaacacac 41103507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 30365197 - 30365133
Alignment:
Q  99 taatttaaaaag-aaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||  |||||| |||  |||||||| ||| ||||||||||| |||||||||||||||    
T  30365197 taatttaaaaattaaaagtgaactctcccctcctttctcctcctaaaccctcaatccaaacacac 30365133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 30581997 - 30582033
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcct 141  Q
    |||||||||||||| || |||||||||||||||||||    
T  30581997 aaaaagaaaagtaagccctcccctcccttcccctcct 30582033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 31738567 - 31738442
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaagaaaagta 117  Q
    |||||||||||||||||   ||||||||||    ||||||| ||| ||| | |||| |||| ||||| ||||||||||   ||||||||||| ||||  |    
T  31738567 catattaacatgataaatgatcatataata----cttcaattacacttaatttattctagagaaacatgttatatagtctgtaatttaaaaaaaaaaaaa 31738472  T
Q  118 aacct-tcccctcccttcccctcctaaacc 146  Q
    || || |||| || ||||||||||||||||    
T  31738471 aaactctcccttctcttcccctcctaaacc 31738442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 31738600 - 31738664
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||  |||||| ||||||  |||||||||||||||| || ||||||||||||    
T  31738600 taatttaaaaatgaaatttaaaccctcccctttcttcccctcctaaaccctccatccaaacacac 31738664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 47391000 - 47390858
Alignment:
Q  18 catattaacatgataaaca-gtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattta-aaaagaaaag 115  Q
    ||||||||||||||||||| |||||||||||||||    ||||||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||||    
T  47391000 catattaacatgataaacaagtcatataatacttc----aatcacaattaatgtattttagaaaaacatgttatatagttcataatttaaaaaagaaaag 47390905  T
Q  116 taaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||| ||| ||||||||||||||||| || |||||||||||||||    
T  47390904 taaaccctccactcccttcccctcctaacccctcaatccaaacacac 47390858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 33655208 - 33655349
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaa-agaaaagt 116  Q
    |||||||||||||||||   ||||||||||||||    ||||||| ||| | ||||||||||||||| |||||||||   ||||||||||| ||||||||    
T  33655208 catattaacatgataaatgatcatataatacttc----aatcacacttaatttattttagaaaaacatgttatatagcccataatttaaaaaagaaaagt 33655303  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| || |||| |||||||||||||||| |||||||||||||||    
T  33655304 aaaccctcgcctctcttcccctcctaaaccctcaatccaaacacac 33655349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 25 - 162
Target Start/End: Original strand, 1051605 - 1051739
Alignment:
Q  25 acatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaacctt 123  Q
    |||||||||||| ||||||||| ||||    ||||||| ||| | ||||||||||||||| |||||||||||  ||||||||||| ||||| |||| | |    
T  1051605 acatgataaacaatcatataatgcttc----aatcacacttaatttattttagaaaaacaggttatatagttcgtaatttaaaaaagaaaaataaatcct 1051700  T
Q  124 cccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    | ||||||||||||||||||||| |||||||||||||||    
T  1051701 ctcctcccttcccctcctaaaccctcaatccaaacacac 1051739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 39856013 - 39856106
Alignment:
Q  70 tattttagaaaaacaagttatatagttgataatttaaaa-agaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||| ||||||||||   |||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  39856013 tattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 39856106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 34228418 - 34228560
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagtt--gataatttaaaaagaaaag 115  Q
    |||||||| ||||||| || ||||||||||||||    ||||||| ||| | ||||||||||||||| |||||||||||  |  | ||||||| ||||||    
T  34228418 catattaatatgataagcaatcatataatacttc----aatcacacttaatttattttagaaaaacatgttatatagttccgtaattttaaaatgaaaag 34228513  T
Q  116 taaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||| | |||||||||||| ||||||||||| ||||| |||||||||    
T  34228514 taaatcctcccctcccttctcctcctaaaccttcaattcaaacacac 34228560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 25887336 - 25887195
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattta-aaaagaaaagt 116  Q
    |||||||| |||||||||| |||||||||||| |    ||||||| ||| | ||||||||||||||| ||||||||||   | ||||| |||||||||      
T  25887336 catattaatatgataaacaatcatataatactcc----aatcacacttaatttattttagaaaaacatgttatatagtccgtgatttataaaagaaaaac 25887241  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||| | ||||||||||||||||| |||||| |||||||||||||||    
T  25887240 aaatcctcccctcccttcccctcataaaccctcaatccaaacacac 25887195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 13771046 - 13771187
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    ||||||||||||||||||| | |||||| |||      ||||||| ||| | ||||||| ||||||| ||||||||||   ||||||||||| |||||||    
T  13771046 catattaacatgataaacaatgatataacactcg----aatcacacttaatttattttaaaaaaacatgttatatagtccgtaatttaaaaacgaaaagt 13771141  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||  || ||||||||||||||||||||| |||||| ||||||||    
T  13771142 aaactctcacctcccttcccctcctaaaccctcaatctaaacacac 13771187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 26365907 - 26365770
Alignment:
Q  23 taacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataat-ttaaaaagaaaagtaaacc 121  Q
    |||||||| ||||| ||||||||||||||    |||||||  |||| ||||||||||||| | |||||||||||  |||| | ||||||||||||||||     
T  26365907 taacatgagaaacaatcatataatacttc----aatcacacctagtttattttagaaaaatatgttatatagtttgtaatataaaaaagaaaagtaaact 26365812  T
Q  122 ttcccctccctt-cccctcctaaaccatcaatccaaacacac 162  Q
     ||  ||||||| ||||||||||||| |||||||||||||||    
T  26365811 ctcaactcccttccccctcctaaaccctcaatccaaacacac 26365770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 41497057 - 41497172
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattt-aaaaagaaaagt 116  Q
    |||||||||||||||||   ||||||||    | ||||||||||| ||| | ||||||||||||||| ||||||||||   |||||| ||||||||||||    
T  41497057 catattaacatgataaatgatcatataa----ttcttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagt 41497152  T
Q  117 aaaccttcccctcccttccc 136  Q
    ||||| ||||||||||||||    
T  41497153 aaaccctcccctcccttccc 41497172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 31571569 - 31571711
Alignment:
Q  19 atattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaa--caagttatatagttgataatttaaaa-agaaaag 115  Q
    |||||||||||||||||| | ||||||||||||    ||||||| ||| | | ||||  |||||  || ||||||| ||   |||||||||| |||||||    
T  31571569 atattaacatgataaacaattatataatacttc----aatcacacttaatatttttttaaaaaaagcatgttatatggtccgtaatttaaaaaagaaaag 31571664  T
Q  116 taaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||  ||||||| |||||||||||||||| |||||||||||||||    
T  31571665 taaactctcccctcgcttcccctcctaaaccctcaatccaaacacac 31571711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 4833598 - 4833537
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaaca 159  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||| || |||||||||    
T  4833598 taatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaaca 4833537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 37925901 - 37925844
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| |||||| |||| |||||||||||||||||||||||| |||||||||||||||    
T  37925901 aaaaataaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 37925844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 163
Target Start/End: Complemental strand, 43230380 - 43230238
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattt-aaaaagaaaagt 116  Q
    ||||||||||||||||||  || |||||    | |||||||| || ||| | ||||||||||||||| |||||||| |   |||||| ||||||||||||    
T  43230380 catattaacatgataaacgatcgtataa----ttcttcaatcgcacttaatttattttagaaaaacatgttatataatccgtaatttaaaaaagaaaagt 43230285  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacaca 163  Q
    ||||| |||||| |||| | ||| ||||||  |||||||||||||||    
T  43230284 aaaccctccccttcctttctctcttaaacccccaatccaaacacaca 43230238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 48881618 - 48881561
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||||| || |||||||||||||||||||||||| || ||||||||||||    
T  48881618 aaaaagaaaagtaagccatcccctcccttcccctcctaaaccctccatccaaacacac 48881561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 24970265 - 24970406
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattt-aaaaagaaaagt 116  Q
    ||||||||| ||||||||  ||||||||||||||    ||||||| ||| | ||||||||||||||| |||||||| |  ||||||| ||||||||||      
T  24970265 catattaacttgataaacgatcatataatacttc----aatcacacttaatttattttagaaaaacatgttatataatccataatttaaaaaagaaaaac 24970360  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||  | ||||||    |||||||||||| |||||||||||||||    
T  24970361 aaactcttccctcctaaaccctcctaaaccctcaatccaaacacac 24970406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 33519225 - 33519289
Alignment:
Q  99 taatttaaa-aagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||| ||||||||||| || |||||||||||||||||||||||| || ||||||||||||    
T  33519225 taatttaaagaagaaaagtaatccctcccctcccttcccctcctaaaccctccatccaaacacac 33519289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 163
Target Start/End: Original strand, 23029482 - 23029571
Alignment:
Q  70 tattttagaaaaacaagttatatagttgataattt-aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacaca 163  Q
    ||||||||||||||| ||||||||||  ||||||| |||||||||||||||     ||||| |||| ||||||||||| |||||| |||||||||    
T  23029482 tattttagaaaaacatgttatatagtctataatttaaaaaagaaaagtaaa-----ccctctcttcacctcctaaaccttcaatcgaaacacaca 23029571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 36267613 - 36267556
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||| ||| || |||||||||||||||||||||||| || ||||||||||||    
T  36267613 aaaaagaaaactaagccctcccctcccttcccctcctaaaccctccatccaaacacac 36267556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 13771015 - 13770951
Alignment:
Q  99 taatttaaaaagaa-aagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| || ||||||| | |||||||||||||||||||||| | |||||||||||||||    
T  13771015 taatttaaaaataataagtaaatcctcccctcccttcccctcctaaatcctcaatccaaacacac 13770951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 18231763 - 18231827
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| |||||||||| | |||||||||||||||||||||||  || ||||||||||||    
T  18231763 taatttaaaaatgaaaagtaaatcctcccctcccttcccctcctaaacgctccatccaaacacac 18231827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 41008325 - 41008188
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaa-caagttatatagttgataatttaaaaa-gaaaag 115  Q
    ||||||||||||||||||| ||||||||      ||||||||||| ||| | ||||||| ||||| || ||||||||||   ||||||||||| |||||     
T  41008325 catattaacatgataaacaatcatataa------cttcaatcacacttaatttattttaaaaaaaacatgttatatagtccgtaatttaaaaaagaaaaa 41008232  T
Q  116 taaaccttcccctcccttcccctcctaaaccatcaatccaaaca 159  Q
     |||   |||||||||||||||||  ||||| ||||||||||||    
T  41008231 caaattctcccctcccttcccctctcaaaccctcaatccaaaca 41008188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 41497024 - 41496960
Alignment:
Q  99 taatttaaaaagaaaa-gtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| |||| ||||| | |||||||||||||||||||||||| || ||||||||||||    
T  41497024 taatttaaaaataaaaagtaaatcatcccctcccttcccctcctaaaccctccatccaaacacac 41496960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 42306507 - 42306571
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||| |||||| |||||||  ||||||||||||||| |||||||||||||||    
T  42306507 taatttaaaaatgaaaattaaaccatcccctcaattcccctcctaaaccctcaatccaaacacac 42306571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 28074145 - 28074106
Alignment:
Q  123 tcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  28074145 tcccctcccttcccctcctaaaccttcaatccaaacacac 28074106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 34235107 - 34235243
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttag-aaaaacaagttatatagttgataatttaaaaa-gaaaag 115  Q
    |||||||| |||||||||| ||||||||||    ||||||||||| ||| | |||||||| ||||||| |||||||| |   ||||||||||| ||||||    
T  34235107 catattaatatgataaacaatcatataata----cttcaatcacacttaatttattttagaaaaaacatgttatataatccgtaatttaaaaatgaaaag 34235202  T
Q  116 taaaccttcccctcccttcccctcctaaaccatcaatccaaacaca 161  Q
    |||||    ||||||  || ||||||||||| ||||||||||||||    
T  34235203 taaac---accctcc--tctcctcctaaaccctcaatccaaacaca 34235243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 162
Target Start/End: Original strand, 36267755 - 36267794
Alignment:
Q  123 tcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  36267755 tcccctcccttcccctcctaaaccctcaatccaaacacac 36267794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 159
Target Start/End: Complemental strand, 40282257 - 40282203
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaaca 159  Q
    ||||||||||  ||||| ||| |||||||||||||||||||| ||||||||||||    
T  40282257 aaaaagaaaatcaaaccctcctctcccttcccctcctaaaccctcaatccaaaca 40282203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 40196592 - 40196535
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||| |||||||||||| ||| |||||||||||||| ||||| || ||||||||||||    
T  40196592 aaaatgaaaagtaaaccctcctctcccttcccctcccaaaccctccatccaaacacac 40196535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 40196632 - 40196741
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    ||||| ||| ||||||||| ||||||||||||||    ||||||| ||| | ||||||||||||||| |||||||| |   |||||||||||  ||||||    
T  40196632 catatcaacctgataaacaatcatataatacttc----aatcacacttaatttattttagaaaaacatgttatatattccgtaatttaaaaacaaaaagt 40196727  T
Q  117 aaaccttcccctccc 131  Q
    ||||| |||||||||    
T  40196728 aaacc-tcccctccc 40196741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 31364249 - 31364285
Alignment:
Q  126 cctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||||||||| |||||||||||||||    
T  31364249 cctcccttcccctcctaaaccctcaatccaaacacac 31364285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 37620816 - 37620777
Alignment:
Q  123 tcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||||||||| ||||| |||||||||||||||    
T  37620816 tcccctcccttcccctcccaaaccctcaatccaaacacac 37620777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 39646511 - 39646472
Alignment:
Q  123 tcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||| |||||||||| |||||||||||||||    
T  39646511 tcccctcccttcctctcctaaaccgtcaatccaaacacac 39646472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 45940710 - 45940659
Alignment:
Q  111 aaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||| || |||||||||||||| ||||||| || ||||||||||||    
T  45940710 aaaagtaaactttgccctcccttccccttctaaaccttccatccaaacacac 45940659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 22163209 - 22163271
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaaca 84  Q
    ||||||||||||||||||  ||||||||||    ||||||||||| ||| | |||||||||||||||    
T  22163209 catattaacatgataaacgatcatataata----cttcaatcacacttaatttattttagaaaaaca 22163271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 22221917 - 22221979
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaaca 84  Q
    ||||||||||||||||||  ||||||||||    ||||||||||| ||| | |||||||||||||||    
T  22221917 catattaacatgataaacgatcatataata----cttcaatcacacttaatttattttagaaaaaca 22221979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 35422145 - 35422198
Alignment:
Q  102 tttaaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatcca 155  Q
    |||||||||||||||||||| ||| |||  || |||||||||||| ||||||||    
T  35422145 tttaaaaagaaaagtaaaccctccactctatttccctcctaaaccctcaatcca 35422198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 13425187 - 13425123
Alignment:
Q  99 taatttaaaaagaaaag-taaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||  |||||| ||| || ||||||||||||||||| || ||||||||||||    
T  13425187 taatttaaaaataaaaaataaaccatcctcttccttcccctcctaaaccctctatccaaacacac 13425123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 25887370 - 25887418
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaacc 146  Q
    ||||||||||| |||| ||||||  ||||||||||||||||||||||||    
T  25887370 taatttaaaaatgaaatgtaaactctcccctcccttcccctcctaaacc 25887418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 37417733 - 37417842
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    |||||| |||||||||||  ||||||||||||||    ||||||| |||   || ||| |||||||| ||||||||||   | ||||||||| |||||||    
T  37417733 catattcacatgataaacgatcatataatacttc----aatcacacttaacttaattttgaaaaacatgttatatagtccgttatttaaaaatgaaaagt 37417828  T
Q  117 aaaccttcccctcc 130  Q
    ||||| ||||||||    
T  37417829 aaaccatcccctcc 37417842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 47391033 - 47391097
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| |||||  ||||  ||||||||||||||||| |||||| || ||||||||||||    
T  47391033 taatttaaaaatgaaaaccaaactctcccctcccttcccctcttaaaccctccatccaaacacac 47391097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 146
Target Start/End: Complemental strand, 48013598 - 48013522
Alignment:
Q  70 tattttagaaaaacaagttatatagttgataatttaaaaagaaaagtaaaccttcccctcccttcccctcctaaacc 146  Q
    ||||||| |||||||  ||| || |||  ||||||||||| |||||  |||  ||||||||||||||||||||||||    
T  48013598 tattttaaaaaaacattttacattgttcgtaatttaaaaataaaagcgaacgctcccctcccttcccctcctaaacc 48013522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 48881758 - 48881790
Alignment:
Q  130 ccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||||| |||||||||||||||    
T  48881758 ccttcccctcctaaaccctcaatccaaacacac 48881790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 39287 - 39431
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaa-agaaaagt 116  Q
    |||||||||||||||||   |||||||||||||| |||||||||| ||| | ||||||||||||||| |||| |||||   |||||||||| ||||||||    
T  39287 catattaacatgataaatgatcatataatacttc-ttcaatcacacttaatttattttagaaaaacatgttacatagtccgtaatttaaaaaagaaaagt 39385  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| ||||||||||| |||| ||||||| |||||||||||||||    
T  39386 aaaccctcccctccctttcccttctaaaccctcaatccaaacacac 39431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 39254 - 39189
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccc-tcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| |||||||||||| ||||| ||  ||||||||||||||| || ||||||||||||    
T  39254 taatttaaaaatgaaaagtaaaccctccccctcatttcccctcctaaaccctccatccaaacacac 39189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 5e-31; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 36347641 - 36347782
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaa-agaaaagt 116  Q
    ||||||||||||||||||| | ||||||||||||    ||||||| ||| | ||||||||||||||| ||||||||||   |||||||||| ||||||||    
T  36347641 catattaacatgataaacaattatataatacttc----aatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagt 36347736  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||  |||| ||||||||||||||||||| |||||||||||||||    
T  36347737 aaactctcccttcccttcccctcctaaaccctcaatccaaacacac 36347782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 15224794 - 15224935
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaa-agaaaagt 116  Q
    |||||||||||||||||   ||||||||||||||    ||||||| ||| | |||| |||||||||| |||||||||    |||||||||| ||||||||    
T  15224794 catattaacatgataaatgatcatataatacttc----aatcacacttaatttattctagaaaaacatgttatatagcccgtaatttaaaaaagaaaagt 15224889  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| |||||||||||||||||||||||| |  ||||||||||||    
T  15224890 aaaccatcccctcccttcccctcctaaacccttgatccaaacacac 15224935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 36566951 - 36567093
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa--gaaaag 115  Q
    |||||||||||||||||   ||||||||||||||    ||||||||||| | |||| |||||||||| |||||||| || ||||||||||||   |||||    
T  36566951 catattaacatgataaatgatcatataatacttc----aatcacaattaatttattatagaaaaacatgttatataattcataatttaaaaacgaaaaag 36567046  T
Q  116 taaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||| | || ||||  ||||||||||||||| |||||||||||||||    
T  36567047 taaatcatctcctctattcccctcctaaaccctcaatccaaacacac 36567093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 9427130 - 9426988
Alignment:
Q  17 gcatattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaag 115  Q
    |||||||| |||||||||||  |||||||||||||  |||  || ||||    || ||| |||||||| |||||||||||| ||||||||||| |||||     
T  9427130 gcatattagcatgataaacaaacatataatacttcaatcacgcataatt----tagttttgaaaaacatgttatatagttggtaatttaaaaaagaaaat 9427035  T
Q  116 taaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
     ||||| || ||||||||||||||||||||  |||||||||||||||    
T  9427034 caaaccctctcctcccttcccctcctaaactttcaatccaaacacac 9426988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 160
Target Start/End: Original strand, 8426975 - 8427110
Alignment:
Q  22 ttaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaac 120  Q
    |||||||||||||   ||||||||||||||    |||| || ||| | ||||||||||||||| ||||||| ||   || |||||||| |||||||||||    
T  8426975 ttaacatgataaatgatcatataatacttc----aatcgcacttaatttattttagaaaaacatgttatatcgtctgtactttaaaaatgaaaagtaaac 8427070  T
Q  121 cttcccctcccttcccctcctaaaccatcaatccaaacac 160  Q
      ||||||||||| |||||||||||| |||||||||||||    
T  8427071 tctcccctccctttccctcctaaaccctcaatccaaacac 8427110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 35736271 - 35736178
Alignment:
Q  70 tattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||| ||||| ||||   | ||||||||| ||||| ||| || |||||||||||||||||||||||| |||||||||||||||    
T  35736271 tattttagaaaaacatgttatctagtccgtgatttaaaaaagaaaattaacccctcccctcccttcccctcctaaaccctcaatccaaacacac 35736178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 2241554 - 2241414
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattta-aaaagaaaagt 116  Q
    ||||||||||||||||||| ||||||||||    ||||||| ||| ||| | ||||||||||||||   |||||||||   ||||||| || | ||||||    
T  2241554 catattaacatgataaacaatcatataata----cttcaattacacttaatttattttagaaaaacgtattatatagtccgtaatttataataaaaaagt 2241459  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||  ||||||||||||||||||| |||| |||||| ||||||||    
T  2241458 aaactctcccctcccttcccctcct-aaccctcaatctaaacacac 2241414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 39732829 - 39732969
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    ||||||||||||||||||  ||||||||||    ||||||||| | ||| | ||||||||||||||| | ||||||||   ||||||||||| |||||||    
T  39732829 catattaacatgataaacgatcatataata----cttcaatcatacttaatttattttagaaaaacatg-tatatagtccgtaatttaaaaacgaaaagt 39732923  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||| | |||| | ||||||||||  ||||| |||||||||||||||    
T  39732924 aaatcatccctttccttcccctctcaaaccttcaatccaaacacac 39732969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 41841778 - 41841685
Alignment:
Q  70 tattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||| |||| | |||||||||||| ||||||||||| |||||  ||||| |||| |||||| |||||||||| | |||||||||||||||    
T  41841778 tattttaggaaaatatgttatatagttggtaatttaaaaaagaaaatcaaaccctcccatccctttccctcctaaatcctcaatccaaacacac 41841685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 162
Target Start/End: Complemental strand, 41778887 - 41778776
Alignment:
Q  52 cttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaa-agaaaagtaaaccttcccctcccttcccctcctaaaccatca 150  Q
    ||||||||||| ||| | ||||||| |||||||  |||||  ||  ||||||||||  | ||||||||||| ||||||||||| |||| ||||||| |||    
T  41778887 cttcaatcacacttaatttattttaaaaaaacattttatactgtccataatttaaagtacaaaagtaaaccctcccctccctttcccttctaaaccctca 41778788  T
Q  151 atccaaacacac 162  Q
    ||||||||||||    
T  41778787 atccaaacacac 41778776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 159
Target Start/End: Original strand, 31061544 - 31061598
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaaca 159  Q
    ||||||||||||||| | |||||||| ||||||||||||||| ||||||||||||    
T  31061544 aaaaagaaaagtaaatcctcccctccattcccctcctaaaccctcaatccaaaca 31061598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 3094501 - 3094594
Alignment:
Q  70 tattttagaaaaacaagttatatagttgataatttaaaaag-aaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||||||  ||| ||||||  |||||||||||  |||||| |  ||||||||||||| || ||||||||| |||||||||||||||    
T  3094501 tattttagaaaaacattttacatagtttgtaatttaaaaaataaaagtgagtcttcccctccctttccttcctaaaccctcaatccaaacacac 3094594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 17379894 - 17379849
Alignment:
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||    
T  17379894 aaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 17379849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 162
Target Start/End: Original strand, 19566920 - 19567057
Alignment:
Q  17 gcatattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattt-aaaaagaaaag 115  Q
    ||||||||| ||||||||| ||| |||||||||||    ||||||| ||| | ||||||||||||||| ||||||||||   |||||| |||||  |||     
T  19566920 gcatattaaaatgataaacggtcgtataatacttc----aatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaaatgaaat 19567015  T
Q  116 taaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||     ||||||| ||| |||||||||| |||||||||||||||    
T  19567016 taaa-----ccctcccctcctctcctaaaccctcaatccaaacacac 19567057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 22356188 - 22356245
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||| | |||| |||||||||||||||||||||| | |||||||||||||||    
T  22356188 aaaaagaaaaatgaaccctcccctcccttcccctcctaaatcctcaatccaaacacac 22356245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 23748279 - 23748336
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||| ||||||| |||| |||||||||||||||||||||||| || ||||||||||||    
T  23748279 aaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctccatccaaacacac 23748336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 36046386 - 36046442
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| |||||||||||| |||||||||||||||| |||||| |||||||||||||||    
T  36046386 aaaaacaaaagtaaacct-cccctcccttcccctcataaaccctcaatccaaacacac 36046442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 17380018 - 17380082
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| |||||  ||||| ||||||| |||||||||||||||| |||||||||||||||    
T  17380018 taatttaaaaatgaaaatcaaaccatcccctcacttcccctcctaaaccctcaatccaaacacac 17380082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 40022501 - 40022422
Alignment:
Q  31 taaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaagaaaa 114  Q
    |||||| ||||||||||    ||||||||||| ||| | ||||||| ||||||| ||||||||||| |||||||||||| ||||    
T  40022501 taaacaatcatataata----cttcaatcacacttaatttattttacaaaaacatgttatatagttcataatttaaaaaaaaaa 40022422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 146
Target Start/End: Complemental strand, 39821765 - 39821688
Alignment:
Q  70 tattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaacc 146  Q
    ||||||||||||||| |||||| | |  |||||||||||| |||||||||||| |||||||| || ||||| ||||||    
T  39821765 tattttagaaaaacatgttatagaatccataatttaaaaatgaaaagtaaaccctcccctccatttccctcttaaacc 39821688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 42296487 - 42296544
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| |||||| |||| || |||||||||||||||||| || |||||||||||||||    
T  42296487 aaaaataaaagtgaaccctctcctcccttcccctcctaatccctcaatccaaacacac 42296544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 45257491 - 45257548
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||||| || ||||||||||| ||||||| | || ||||||||||||    
T  45257491 aaaaagaaaagtaaaccatctcctcccttcccatcctaaaacctccatccaaacacac 45257548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 28262574 - 28262642
Alignment:
Q  53 ttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattt-aaaaagaaaagtaaac 120  Q
    ||||||||||  || | ||||||||||||||| ||||||||||  ||||||| ||||||||||||||||    
T  28262574 ttcaatcacatgtaatttattttagaaaaacatgttatatagtcaataatttaaaaaagaaaagtaaac 28262642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 34187642 - 34187578
Alignment:
Q  99 taatttaaaaag-aaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||  |||||| ||||||||||| |||||| |||||||||  |||||||||||||||    
T  34187642 taatttaaaaattaaaagtgaaccttccccttccttccactcctaaactctcaatccaaacacac 34187578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 35736365 - 35736428
Alignment:
Q  100 aatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||| ||||||| | || |||||||||||| ||||||||||| || ||||||||||||    
T  35736365 aatttaaaaacgaaaagtgagccctcccctcccttcacctcctaaaccctccatccaaacacac 35736428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 17331480 - 17331434
Alignment:
Q  100 aatttaaaaagaaaagtaaaccttcccctcccttcccctcctaaacc 146  Q
    |||| ||||||||||||||||| |||||||| |||||||||| ||||    
T  17331480 aattaaaaaagaaaagtaaaccctcccctcctttcccctccttaacc 17331434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 159
Target Start/End: Original strand, 31795968 - 31796002
Alignment:
Q  125 ccctcccttcccctcctaaaccatcaatccaaaca 159  Q
    |||||||||||||||||||||| ||||||||||||    
T  31795968 ccctcccttcccctcctaaaccttcaatccaaaca 31796002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 887294 - 887335
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaacc 146  Q
    |||||||||||||| |  ||||||||||||||||||||||||    
T  887294 aaaaagaaaagtaagcgctcccctcccttcccctcctaaacc 887335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 1052814 - 1052773
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaacc 146  Q
    ||||||||||||||| |||||||||| ||| |||||||||||    
T  1052814 aaaaagaaaagtaaatcttcccctccattctcctcctaaacc 1052773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 31061419 - 31061362
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| |||||| | || |||| ||| ||||||||||||||| |||||||||||||||    
T  31061419 aaaaataaaagtgagccctcccatcctttcccctcctaaaccttcaatccaaacacac 31061362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 42813804 - 42813861
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||| ||| || ||||||| |||||||||||||||| |  ||||||||||||    
T  42813804 aaaaagaaaaataagccatcccctctcttcccctcctaaacccttcatccaaacacac 42813861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 9631737 - 9631801
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||||| |||| ||  ||||||| |||||||||||| || ||||||||||||    
T  9631737 taatttaaaaacgaaaagttaaccctcttctccctttccctcctaaaccctccatccaaacacac 9631801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 17379957 - 17379925
Alignment:
Q  17 gcatattaacatgataaacagtcatataatact 49  Q
    |||||||||||||||||||| ||||||||||||    
T  17379957 gcatattaacatgataaacaatcatataatact 17379925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 23748239 - 23748130
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattt-aaaaagaaaagt 116  Q
    ||||||||||||||||||  | ||||||||    ||||||||||| ||  | |||||| |||||||| ||||||||||   || ||| |||||||||| |    
T  23748239 catattaacatgataaacgataatataata----cttcaatcacacttgatttatttttgaaaaacatgttatatagtccgtagtttaaaaaagaaaact 23748144  T
Q  117 aaaccttcccctcc 130  Q
    ||||| ||||||||    
T  23748143 aaaccctcccctcc 23748130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 31795836 - 31795772
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| |||||||||  | |||||||||||| |||| |||||| || ||||||||||||    
T  31795836 taatttaaaaacgaaaagtaagtcctcccctcccttcacctcataaaccctccatccaaacacac 31795772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 36046271 - 36046207
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||| |||||  |||||||  ||||||||||||||| || ||||||||||||    
T  36046271 taatttaaaaatgaaaaataaactctcccctcatttcccctcctaaaccctccatccaaacacac 36046207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 40022550 - 40022614
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| |||| ||||||| |||||||||||| |||| |||||| || |||||| |||||    
T  40022550 taatttaaaaatgaaatgtaaaccctcccctcccttctcctcttaaaccctccatccaagcacac 40022614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 13634855 - 13634714
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagt-tgataatttaaaaagaaaagt 116  Q
    ||||||||||||||||||  ||||||||||     ||||||||||  || | ||||||||||||||| ||||||||||  | || || ||||||||||||    
T  13634855 catattaacatgataaacgatcatataata----attcaatcacacataatttattttagaaaaacatgttatatagtccgttatttaaaaaagaaaagt 13634760  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||    
T  13634759 aaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 13634714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 26415037 - 26414896
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    ||||||||||||||||||   |||||||||||||    ||||||| ||| | ||||||||||||||| || |||||||   ||||||||||| |||||||    
T  26415037 catattaacatgataaacgaccatataatacttc----aatcacacttaatatattttagaaaaacatgtcatatagtccgtaatttaaaaacgaaaagt 26414942  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||||    
T  26414941 aaaccctcccctcccttctcctcctaaaccctcaatccaaacacac 26414896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 7544281 - 7544139
Alignment:
Q  17 gcatattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaag 115  Q
    |||||||||||| ||||||| ||||||||||||||    ||||||| ||  | ||||||||||||||| ||||||||||   ||||||||||| |||||     
T  7544281 gcatattaacataataaacaatcatataatacttc----aatcacacttgatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaat 7544186  T
Q  116 taaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    | | || |||||||||||||| ||||||||| |||||||||||||||    
T  7544185 ttagccctcccctcccttcccttcctaaaccctcaatccaaacacac 7544139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 2550459 - 2550592
Alignment:
Q  25 acatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagtt-gataatttaaaaagaaaagtaaacctt 123  Q
    |||||||||||| ||||||||||||||    |||||||  || | |||| |||||||||| ||||||||||  ||   || ||||||||||||||||| |    
T  2550459 acatgataaacaatcatataatacttc----aatcacacgtaatttattatagaaaaacatgttatatagtccgaatcttaaaaaagaaaagtaaaccct 2550554  T
Q  124 cccctcccttcccctcctaaaccatcaatccaaacaca 161  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  2550555 cccctcccttcccctcctaaaccctcaatccaaacaca 2550592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 14681612 - 14681472
Alignment:
Q  19 atattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagta 117  Q
    ||||||||||||||||||||||||||    |||||||||||||| ||| | ||||||| ||||||| |||||||| |   ||||||||||| ||||| |     
T  14681612 atattaacatgataaacagtcatata----ttccttcaatcacatttaatttattttaaaaaaacatgttatataatctgtaatttaaaaaagaaaattt 14681517  T
Q  118 aaccttcccctcccttcccctcctaaaccatcaatccaaacacaca 163  Q
    |||| || | ||| ||||||||||||||| ||||||||||||||||    
T  14681516 aaccatcacttcc-ttcccctcctaaaccctcaatccaaacacaca 14681472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 161
Target Start/End: Original strand, 10072747 - 10072887
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaa-agaaaagt 116  Q
    ||||||||||||||||||  ||||||||||||||    ||||| | ||| | ||||||||||||||| ||||||  || | |||||||||| ||||||||    
T  10072747 catattaacatgataaacgatcatataatacttc----aatcatacttaatttattttagaaaaacatgttataccgtcggtaatttaaaaaagaaaagt 10072842  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacaca 161  Q
    ||| |||| ||||| || ||||| |||||||||||| ||||||||    
T  10072843 aaatcttctcctccttttccctcttaaaccatcaattcaaacaca 10072887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 162
Target Start/End: Complemental strand, 16938592 - 16938482
Alignment:
Q  53 ttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaa 151  Q
    |||||||||| ||| | ||||||||| ||||| ||||||||||   ||| ||||||| |||||  ||||| |||||||||||||||||||||||| ||||    
T  16938592 ttcaatcacacttaatttattttagagaaacatgttatatagtccgtaacttaaaaaagaaaaacaaaccctcccctcccttcccctcctaaaccctcaa 16938493  T
Q  152 tccaaacacac 162  Q
    |||||||||||    
T  16938492 tccaaacacac 16938482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 28279576 - 28279718
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaa-caagttatatagttgataatttaaaaag-aaaag 115  Q
    |||||||||||||||||   ||||||||||||||    ||||||| ||||| ||||||||||||| || |||||||| |  ||||||||||||| |||||    
T  28279576 catattaacatgataaatgatcatataatacttc----aatcacacttagtttattttagaaaaaacatgttatatattccataatttaaaaaggaaaag 28279671  T
Q  116 taaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||| || |||||||||||||  || ||  |||||||||||||||    
T  28279672 taaaccctctcctcccttccccttatagactctcaatccaaacacac 28279718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 14245148 - 14245091
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||    
T  14245148 aaaaagaaaagtaaatcctcccctcccttcccctcctaaaccctcaatccaaacacac 14245091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 1657990 - 1658054
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||| || ||||||||||||    
T  1657990 taatttaaaaatgaaaagtaaaccctcccctcccttcccctcctaaaccctccatccaaacacac 1658054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 13634888 - 13634952
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||||||| || |||||||||||||||||||||||| |||||||||||||||    
T  13634888 taatttaaaaatgaaaagtaacccctcccctcccttcccctcctaaaccctcaatccaaacacac 13634952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 10476172 - 10476029
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagt-tatatagttgataattt--aaaaagaaaa 114  Q
    |||||||| |||||||||  | ||||||||||||    ||||||| ||| | ||||||||||||||| || |||||| |   ||||||  ||||||||||    
T  10476172 catattaagatgataaacgattatataatacttc----aatcacacttaatttattttagaaaaacatgtatatataatctgtaattttaaaaaagaaaa 10476077  T
Q  115 gtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||| || | ||||||||||||||||||| ||||| |||||||||    
T  10476076 gtaaaccctctcatcccttcccctcctaaaccctcaattcaaacacac 10476029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 40815393 - 40815300
Alignment:
Q  70 tattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||| ||||||| ||||||||||   ||||||||||| |||||||||| | || | ||||||||||||||||| | |||||||||||||||    
T  40815393 tattttataaaaacatgttatatagtctgtaatttaaaaaagaaaagtaaatcctctcttcccttcccctcctaaatcttcaatccaaacacac 40815300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 14245223 - 14245287
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| |||||  ||||| |||||||||||||||||||||||| |||||||||||||||    
T  14245223 taatttaaaaatgaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 14245287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 160
Target Start/End: Complemental strand, 36363128 - 36363037
Alignment:
Q  70 tattttagaaaaacaagttatatagttgataatttaaa-aagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacac 160  Q
    ||||||||||||||| ||||||||||   || |||||| ||||||| |||||  |||||||| ||||||| ||||||| |||||||||||||    
T  36363128 tattttagaaaaacatgttatatagtacgtagtttaaacaagaaaattaaactctcccctccattccccttctaaaccctcaatccaaacac 36363037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 162
Target Start/End: Complemental strand, 22022963 - 22022850
Alignment:
Q  53 ttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaagaaaag----taaaccttcccctcccttcccctcctaaaccat 148  Q
    |||||||||| ||| | ||||||||||||| | ||||||||||   ||||||||||| ||||     |||| | || ||||| ||||||||||||||| |    
T  22022963 ttcaatcacacttaatttattttagaaaaatatgttatatagtccgtaatttaaaaaaaaaaaaaactaaatcctctcctccattcccctcctaaaccct 22022864  T
Q  149 caatccaaacacac 162  Q
    ||||||||||||||    
T  22022863 caatccaaacacac 22022850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 34980877 - 34980813
Alignment:
Q  99 taatttaaaaag-aaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||  |||||| |||| | |||||||||||||||||||||| |||||||||||||||    
T  34980877 taatttaaaaattaaaagtgaacccttccctcccttcccctcctaaaccttcaatccaaacacac 34980813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 11436999 - 11436944
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacac 160  Q
    |||||| ||||||| || ||| |||||||||||||||||||| |||||||||||||    
T  11436999 aaaaaggaaagtaagccctcctctcccttcccctcctaaaccctcaatccaaacac 11436944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 161
Target Start/End: Complemental strand, 11757021 - 11756882
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattta-aaaagaaaagt 116  Q
    ||||||||||| |||||   |||||||||||||     ||||||| ||| | ||||||||| ||||| |||||||||||  ||||||| |||| ||||      
T  11757021 catattaacatcataaatgatcatataatacttt----aatcacacttaatttattttagagaaacatgttatatagttcgtaatttaaaaaataaaaac 11756926  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacaca 161  Q
    ||||  |||| |||| |||||||||||||| ||||||||||||||    
T  11756925 aaactctcccatccc-tcccctcctaaaccctcaatccaaacaca 11756882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 160
Target Start/End: Original strand, 36392250 - 36392388
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    ||||||||||||||||||  ||||||||||||||    ||||||| ||| | ||||||||||||   | |||||||||   ||||||||||| ||||  |    
T  36392250 catattaacatgataaacgatcatataatacttc----aatcacacttaatctattttagaaaatata-ttatatagtccgtaatttaaaaacgaaatat 36392344  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacac 160  Q
    ||||   || ||| |||||||||||||||| |||||||||||||    
T  36392345 aaacacaccgctctcttcccctcctaaaccctcaatccaaacac 36392388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 135
Target Start/End: Original strand, 9798716 - 9798826
Alignment:
Q  22 ttaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagt-tgataatttaaaaagaaaagtaaac 120  Q
    ||||||||| ||||  ||||||||||||||    ||||||||||| | ||||| ||||||||| |||||||| | ||  | ||||||||||||||||||     
T  9798716 ttaacatgaaaaacgatcatataatacttc----aatcacaattaatttatttaagaaaaacatgttatataatctgtaattttaaaaagaaaagtaaat 9798811  T
Q  121 cttcccctcccttcc 135  Q
    | | |||||||||||    
T  9798812 ccttccctcccttcc 9798826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 113 - 162
Target Start/End: Original strand, 10476220 - 10476269
Alignment:
Q  113 aagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||  |||||||||||||||||||||||| || ||||||||||||    
T  10476220 aagtaaacactcccctcccttcccctcctaaaccctccatccaaacacac 10476269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 11757080 - 11757145
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacaca 163  Q
    ||||||||||| ||||  |||||| ||||||||||||||||| |||||| || |||||||||||||    
T  11757080 taatttaaaaatgaaatctaaaccctcccctcccttcccctcttaaaccctccatccaaacacaca 11757145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 20147074 - 20147111
Alignment:
Q  125 ccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||||||||||||| |||||||||||||||    
T  20147074 ccctcccttcccctcctaaaccctcaatccaaacacac 20147111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 33744253 - 33744196
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||||| |||||||||||| || ||| |||| || ||||||||||||    
T  33744253 aaaaagaaaagtaaaccctcccctcccttctccgccttaaccctccatccaaacacac 33744196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 42681508 - 42681451
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| ||||||||| | |||||||| |||||||| |||||| |||||||||||||||    
T  42681508 aaaaaaaaaagtaaatcctcccctcctttcccctcttaaaccctcaatccaaacacac 42681451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 4373666 - 4373807
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattt-aaaaagaaaagt 116  Q
    |||||||||||||||||   ||||||||||     |||||||||| ||| | ||||||  ||||||  ||||||||||   |||||| ||||||||||||    
T  4373666 catattaacatgataaatgatcatataata----tttcaatcacacttaatttatttttaaaaaacttgttatatagtccgtaatttaaaaaagaaaagt 4373761  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||| | ||| ||   ||||| ||||||||| |||||||||||||||    
T  4373762 aaatcctccactattttcccttcctaaaccctcaatccaaacacac 4373807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 7544313 - 7544377
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| |||||  ||||| |||||| ||||||||||||||||| || ||||||||||||    
T  7544313 taatttaaaaatgaaaaccaaaccctccccttccttcccctcctaaaccctccatccaaacacac 7544377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 9857024 - 9856915
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattta-aaaagaaaagt 116  Q
    ||||||||||| ||||||  ||||||||||||||    ||||||| ||  | ||||||||||||||| ||||||||||   ||||||| ||||||||| |    
T  9857024 catattaacataataaacgatcatataatacttc----aatcacacttgatttattttagaaaaacatgttatatagtccttaatttaaaaaagaaaact 9856929  T
Q  117 aaaccttcccctcc 130  Q
    ||||  ||||||||    
T  9856928 aaactctcccctcc 9856915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 10650591 - 10650655
Alignment:
Q  99 taatttaaaaagaaaa-gtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| |||| |||||| ||| ||||||||||||||| ||||  |||||||||||||||    
T  10650591 taatttaaaaacaaaaagtaaactttctcctcccttcccctcccaaactttcaatccaaacacac 10650655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 162
Target Start/End: Original strand, 5688592 - 5688631
Alignment:
Q  123 tcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||| ||||||||||||||||||| |||||||||||||||    
T  5688592 tcccttcccttcccctcctaaaccctcaatccaaacacac 5688631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Complemental strand, 12035974 - 12035939
Alignment:
Q  127 ctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||||||||||| ||||||||||||    
T  12035974 ctcccttcccctcctaaaccatctatccaaacacac 12035939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 162
Target Start/End: Original strand, 40305867 - 40305906
Alignment:
Q  123 tcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  40305867 tcccctcccttctcctcctaaaccctcaatccaaacacac 40305906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 8551621 - 8551659
Alignment:
Q  124 cccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||| |||||||||||||||| |||||||||||||||    
T  8551621 cccctctcttcccctcctaaaccttcaatccaaacacac 8551659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 10204755 - 10204817
Alignment:
Q  100 aatttaaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||| ||||||||||||||  | |||||||||||||||||||||||  ||  |||||||||||    
T  10204755 aattaaaaaagaaaagtaagtcctcccctcccttcccctcctaaactctctttccaaacacac 10204817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 15986689 - 15986627
Alignment:
Q  100 aatttaaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||| |||||||||| |||  | |||||||||||||||||||||||| ||  |||||||||||    
T  15986689 aattaaaaaagaaaattaagtcctcccctcccttcccctcctaaaccctctttccaaacacac 15986627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 21581150 - 21581188
Alignment:
Q  124 cccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  21581150 cccctcccttcccctcctaaaccctccatccaaacacac 21581188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 36363209 - 36363271
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacac 160  Q
    ||||||||||| ||||||| |||  || ||||||||||||||||||||| || ||||||||||    
T  36363209 taatttaaaaatgaaaagtgaactctctcctcccttcccctcctaaaccctccatccaaacac 36363271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 10204636 - 10204579
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| |||||| | || || ||||||||||||||||||||| || ||||||||||||    
T  10204636 aaaaataaaagtgagccctcacctcccttcccctcctaaaccctcgatccaaacacac 10204579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 14684668 - 14684725
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||||| || ||| ||| || ||||||||||||| | |||||||||||||    
T  14684668 aaaaagaaaagtaagccctcctctctctgcccctcctaaaccctaaatccaaacacac 14684725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 15986808 - 15986865
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| |||||| | || ||| || ||||||||||||||||| |||||||||||||||    
T  15986808 aaaaataaaagtgagccctcctcttccttcccctcctaaaccctcaatccaaacacac 15986865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 37551589 - 37551646
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||| |||||||||||| ||| ||||||| ||||| |||||| || ||||||||||||    
T  37551589 aaaatgaaaagtaaaccatcctctccctttccctcgtaaaccctccatccaaacacac 37551646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 37654419 - 37654476
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||| |||||||||||| ||| ||||||| ||||| |||||| || ||||||||||||    
T  37654419 aaaatgaaaagtaaaccatcctctccctttccctcgtaaaccctccatccaaacacac 37654476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 40305710 - 40305673
Alignment:
Q  125 ccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||||||||||||| || ||||||||||||    
T  40305710 ccctcccttcccctcctaaaccctccatccaaacacac 40305673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 8502902 - 8502838
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||||| |||| |||| ||| ||||| || ||||||||| ||||||||||||    
T  8502902 taatttaaaaatgaaaagtgaaccctcccatccattcccttcataaaccatccatccaaacacac 8502838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 16938656 - 16938720
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||  |||||| |||||||| |||| |||||||||| || ||||||||||||    
T  16938656 taatttaaaaatgaaatctaaaccctcccctccattcctctcctaaaccctccatccaaacacac 16938720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 31348421 - 31348562
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagt-tgataatttaaaaagaaaagt 116  Q
    ||||||||||||||||||| ||||||||||     ||||||||||  || | ||||||||||||||| ||||||||||  | || || ||||||||||||    
T  31348421 catattaacatgataaacaatcatataata----attcaatcacacataatttattttagaaaaacatgttatatagtccgttatttaaaaaagaaaagt 31348516  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| |||||||||||||||||||||||  |||||||||||||||    
T  31348517 aaaccctcccctcccttcccctcctaaactctcaatccaaacacac 31348562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 46007801 - 46007942
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaa-agaaaagt 116  Q
    |||||||||||||||||   ||||||||||||||    |||| || ||| | ||||||| ||||||||||||||||||    ||||||||| ||||||||    
T  46007801 catattaacatgataaatgatcatataatacttc----aatctcacttaatttattttacaaaaacaagttatatagtctgcaatttaaaaaagaaaagt 46007896  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||    
T  46007897 aaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 46007942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 52 - 162
Target Start/End: Complemental strand, 54935182 - 54935070
Alignment:
Q  52 cttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaaccttcccc-tcccttcccctcctaaaccatc 149  Q
    ||||||||||| ||| | ||||||||||||||| |||||||||||  ||||||||||| |||||||||||| ||||| ||||||||||||||||||| ||    
T  54935182 cttcaatcacacttaatttattttagaaaaacatgttatatagttcgtaatttaaaaaagaaaagtaaaccctccccctcccttcccctcctaaaccctc 54935083  T
Q  150 aatccaaacacac 162  Q
    |||||||||||||    
T  54935082 aatccaaacacac 54935070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 162
Target Start/End: Complemental strand, 54320579 - 54320438
Alignment:
Q  17 gcatattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaag 115  Q
    |||||||||||||||||||| |||||||||||| |    ||||||| ||| | ||||||||||||||| | |||||||| | ||||||||||| |||||     
T  54320579 gcatattaacatgataaacaatcatataatactcc----aatcacacttaatttattttagaaaaacatgatatatagtcggtaatttaaaaaagaaaat 54320484  T
Q  116 taaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
     ||||| |||| |||||| |||||||||||| |||||||||||||||    
T  54320483 caaaccctccc-tccctttccctcctaaaccctcaatccaaacacac 54320438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 26167081 - 26166940
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    ||||||||||||||||||  ||||||||||||||    ||||||| ||| | ||||||||| ||||| ||||||||||   ||||||||||| |||||      
T  26167081 catattaacatgataaacgatcatataatacttc----aatcacacttaatttattttagagaaacatgttatatagtctgtaatttaaaaaagaaaaac 26166986  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||  |||||||| ||||||||||||||| |||||||||||||||    
T  26166985 aaactctcccctccattcccctcctaaaccctcaatccaaacacac 26166940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 45742034 - 45741893
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattta-aaaagaaaagt 116  Q
    ||||||||||||||||||  ||||||||||||||    ||||||| ||| | ||||||||||||||||||||||||||   ||||||| |||| ||||||    
T  45742034 catattaacatgataaacgatcatataatacttc----aatcacatttaatttattttagaaaaacaagttatatagtccgtaatttaaaaaacaaaagt 45741939  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||| | || | | | ||||||||||||||| |||||||||||||||    
T  45741938 aaatcctcacattcattcccctcctaaaccctcaatccaaacacac 45741893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 1968459 - 1968600
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    ||||||||||||||||||  ||||||||||||||    |||||||  |  | |||||||||||||||  |||||||||   ||||||||||| ||||| |    
T  1968459 catattaacatgataaacgatcatataatacttc----aatcacacctgatttattttagaaaaacatattatatagtccgtaatttaaaaatgaaaatt 1968554  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||  | |||||||||||||||||||||| |||||||||||||||    
T  1968555 aaactcttccctcccttcccctcctaaaccctcaatccaaacacac 1968600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 27735890 - 27735749
Alignment:
Q  17 gcatattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaag 115  Q
    ||||||||||||||||||   ||||||||||||||    ||||||| ||| | ||||||| ||||||| ||||||||||   ||||||||||| |||||     
T  27735890 gcatattaacatgataaatgatcatataatacttc----aatcacacttaatttattttaaaaaaacatgttatatagtccgtaatttaaaaatgaaaat 27735795  T
Q  116 taaaccttcccctcccttcccctcctaaaccatcaatccaaacaca 161  Q
    |||||| || | ||||||||||||||||||| || |||||||||||    
T  27735794 taaaccctctcttcccttcccctcctaaaccctcgatccaaacaca 27735749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 163
Target Start/End: Complemental strand, 16400944 - 16400802
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaag-aaaagt 116  Q
    ||||||||||||||||||  ||||||||||||||    ||||| ||||| | ||||||||||||||| ||| |||||||  || | ||||||  ||||||    
T  16400944 catattaacatgataaacgatcatataatacttc----aatcataattaatttattttagaaaaacatgttgtatagtttgtagtataaaaaataaaagt 16400849  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacaca 163  Q
     || | |||||||||||| ||||||||||| ||||||||| ||||||    
T  16400848 gaatcctcccctcccttctcctcctaaaccctcaatccaatcacaca 16400802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 52 - 162
Target Start/End: Original strand, 47433838 - 47433950
Alignment:
Q  52 cttcaatcacaattagtgtattttagaaaaacaagttat-atagttgataatttaaaa-agaaaagtaaaccttcccctcccttcccctcctaaaccatc 149  Q
    ||||||||||| ||| | ||||||| ||||||| ||||| |||||   |||||||||| ||||||||||||| ||| |||||||||||||||||||| ||    
T  47433838 cttcaatcacacttaatttattttaaaaaaacatgttattatagtctgtaatttaaaaaagaaaagtaaaccctcctctcccttcccctcctaaaccgtc 47433937  T
Q  150 aatccaaacacac 162  Q
    || ||||||||||    
T  47433938 aacccaaacacac 47433950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 29798383 - 29798291
Alignment:
Q  71 attttagaaaaacaagttatatagttgataatttaaaaag-aaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||| ||||||||| ||||||||||   |||||||||||  ||||||||||  ||| ||| ||||||||||||||||||||||||||||||||    
T  29798383 atttaagaaaaacatgttatatagtctgtaatttaaaaaataaaagtaaactatcctctctcttcccctcctaaaccatcaatccaaacacac 29798291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 162
Target Start/End: Complemental strand, 37711286 - 37711141
Alignment:
Q  19 atattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagta 117  Q
    ||||||||||||||||   ||||||||||||||    ||||||| ||| | ||||||||| ||||| ||||||||||   ||||||||||| |||||  |    
T  37711286 atattaacatgataaatgatcatataatacttc----aatcacacttaatttattttagagaaacatgttatatagtccgtaatttaaaaaagaaaaaca 37711191  T
Q  118 aaccttcccctcccttccc-----ctcctaaaccatcaatccaaacacac 162  Q
    |||| ||||||||||||||     |||||||||| |||||||||||||||    
T  37711190 aaccctcccctcccttcccttcccctcctaaaccctcaatccaaacacac 37711141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 49735535 - 49735471
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||||| |||| |||||||||||||||||||||||| |||||||||||||||    
T  49735535 taatttaaaaatgaaaagtgaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 49735471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 5730930 - 5731072
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaaga--aaag 115  Q
    |||||||||||||||||   ||||||||||||||    ||| ||| ||| | ||||||||| ||||| ||||||||||   ||||||||||| |  |||     
T  5730930 catattaacatgataaatgatcatataatacttc----aattacacttaatttattttagagaaacatgttatatagtccgtaatttaaaaaaagtaaaa 5731025  T
Q  116 taaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
     ||||  |||||||||||||||||||||||| ||||| |||||||||    
T  5731026 caaactctcccctcccttcccctcctaaaccctcaattcaaacacac 5731072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 54935246 - 54935310
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||| |||||| |||||||||||||||||||||||| || ||||||||||||    
T  54935246 taatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccctccatccaaacacac 54935310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 162
Target Start/End: Original strand, 2247952 - 2248042
Alignment:
Q  72 ttttagaaaaacaagttatatagttgataatttaaaa-agaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||| ||||||||  || |||||||||| ||||||||||||  |||| || |||| ||||||||||| |||||||||||||||    
T  2247952 ttttagaaaaacatgttatatatctg-taatttaaaaaagaaaagtaaactctcccttcacttctcctcctaaaccctcaatccaaacacac 2248042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 41174524 - 41174586
Alignment:
Q  100 aatttaaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||| |||| ||||| |||||| |||||||||||||||||||||||| || ||||||||||||    
T  41174524 aattaaaaatgaaaactaaaccatcccctcccttcccctcctaaaccctccatccaaacacac 41174586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 162
Target Start/End: Original strand, 49735687 - 49735733
Alignment:
Q  116 taaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||    
T  49735687 taaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 49735733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 6891499 - 6891373
Alignment:
Q  23 taacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattt-aaaaagaaaagtaaacc 121  Q
    |||||| ||||||  ||||||||||    ||||||||||| ||| | ||||||||||||||| |||||||| ||  || ||| |||||||||| |||||     
T  6891499 taacattataaacgatcatataata----cttcaatcacacttaatttattttagaaaaacatgttatataatttgtattttaaaaaagaaaaataaact 6891404  T
Q  122 ttcccctcccttcccctcctaaaccatcaat 152  Q
     ||||||| |||||||| ||||||| |||||    
T  6891403 atcccctctcttccccttctaaaccctcaat 6891373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 49735616 - 49735692
Alignment:
Q  70 tattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaacc 146  Q
    ||||||||||||||| ||||||||||   || |||||||| ||||| ||||||| |||||||||||||||||||||||    
T  49735616 tattttagaaaaacatgttatatagtccgtagtttaaaaaagaaaactaaacct-cccctcccttcccctcctaaacc 49735692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 54320630 - 54320675
Alignment:
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||    
T  54320630 aaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 54320675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 54576387 - 54576330
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||||| || |||||||||||||||| ||||||| || ||||||||||||    
T  54576387 aaaaagaaaagtaagccctcccctcccttccccttctaaaccctccatccaaacacac 54576330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 56135809 - 56135752
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| |||| | |||| |||||||||||||||||||||||| |||||||||||||||    
T  56135809 aaaaataaaaatgaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 56135752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 35248828 - 35248743
Alignment:
Q  20 tattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa 109  Q
    ||||||||||||||| | ||||||||||||||    ||||||| ||| | ||||||||||||||| ||||||||||   |||||||||||    
T  35248828 tattaacatgataaataatcatataatacttc----aatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaa 35248743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 36151720 - 36151647
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagt 95  Q
    ||||||||||||||||||  ||||||||||||||    ||||||| ||| | ||||||||||||||| ||||||||||    
T  36151720 catattaacatgataaacgatcatataatacttc----aatcacacttaatttattttagaaaaacatgttatatagt 36151647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 37711300 - 37711364
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||  |||||| |||||||||||||||||||||||| || ||||||||||||    
T  37711300 taatttaaaaatgaaatctaaaccctcccctcccttcccctcctaaaccctccatccaaacacac 37711364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 158
Target Start/End: Complemental strand, 35565616 - 35565565
Alignment:
Q  107 aaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaac 158  Q
    |||||||||||| || |||||||||||||||| ||||||| |||||||||||    
T  35565616 aaagaaaagtaagccctcccctcccttcccctgctaaaccctcaatccaaac 35565565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 6938348 - 6938287
Alignment:
Q  99 taatttaaaaag-aaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaaca 159  Q
    |||||||||||| |||| |||| | || ||||||||||||||||||| ||||||||||||||    
T  6938348 taatttaaaaaggaaaaataaatcctctcctcccttcccctcctaaatcatcaatccaaaca 6938287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 17938212 - 17938346
Alignment:
Q  23 taacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaa-gttatatagttgataatttaaaa-agaaaagtaaac 120  Q
    |||||||||||||  ||||||||||||||    ||||||| ||| | ||||| | |||||  | |||||||||||  |||||||||| ||||||||||||    
T  17938212 taacatgataaacgatcatataatacttc----aatcacacttaatttatttaaaaaaaaatatgttatatagtttgtaatttaaaaaagaaaagtaaac 17938307  T
Q  121 cttcccctcccttcccctcctaaaccatcaatccaaaca 159  Q
      ||  ||||||||||||||||||   ||||||||||||    
T  17938308 tctcatctcccttcccctcctaaattctcaatccaaaca 17938346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 21695064 - 21695129
Alignment:
Q  98 ataatttaaaa-agaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||||||||||| ||| || |||||||||| ||||||  ||||||||||||||    
T  21695064 ataatttaaaatagaaaagtaaaccctccgcttccttcccctcataaacccccaatccaaacacac 21695129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 22921077 - 22920984
Alignment:
Q  70 tattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||| |||||||||| ||||| |||||  ||||||||||| |||| |||||   ||| |||  || ||||||||||||||||||||||||||||    
T  22921077 tattctagaaaaacatgttatgtagtttgtaatttaaaaaagaaacgtaaattctcctctctttttccctcctaaaccatcaatccaaacacac 22920984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 162
Target Start/End: Original strand, 22970722 - 22970815
Alignment:
Q  70 tattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||| |||||||||| ||||| |||||  ||||||||||| |||| |||||   ||| |||  || ||||||||||||||||||||||||||||    
T  22970722 tattctagaaaaacatgttatgtagtttgtaatttaaaaaagaaacgtaaattctcctctctttttccctcctaaaccatcaatccaaacacac 22970815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 45132679 - 45132736
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||||| || |||| |||||||||||||||  ||||| |||||||||    
T  45132679 aaaaagaaaagtaaaccatctcctctcttcccctcctaaactctcaattcaaacacac 45132736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 47846240 - 47846297
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| ||||||||||| |||| ||||||| |||| |||||| |||||||||||||||    
T  47846240 aaaaataaaagtaaaccctcccatcccttctcctcttaaaccctcaatccaaacacac 47846297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 47846447 - 47846504
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| |||||||||||||||  ||||||| |||| |||||| |||||||||||||||    
T  47846447 aaaaataaaagtaaaccttcctttcccttctcctcttaaaccctcaatccaaacacac 47846504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 2917063 - 2917136
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagt 95  Q
    ||||||||||||||||||  ||||||||||    ||||||||||||| | | |||||||||||| || ||||||||||    
T  2917063 catattaacatgataaacgatcatataata----cttcaatcacaataaatttattttagaaaatcatgttatatagt 2917136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 6938424 - 6938488
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||||| |||| |||||||| |||||||| |||||| || ||||||||||||    
T  6938424 taatttaaaaatgaaaagtgaaccctcccctccattcccctcataaaccttccatccaaacacac 6938488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 44145815 - 44145776
Alignment:
Q  123 tcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  44145815 tcccctcccttcccctcctaaaccttgaatccaaacacac 44145776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 53260759 - 53260721
Alignment:
Q  124 cccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  53260759 cccctcccttcccctcctaaaccctccatccaaacacac 53260721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 7977681 - 7977738
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| |||| | |||| |||||||| |||||||| |||||| |||||||||||||||    
T  7977681 aaaaataaaattgaaccctcccctcctttcccctcataaaccctcaatccaaacacac 7977738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 21694950 - 21694909
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaacc 146  Q
    |||||||||||||| || |||| |||||||||||||||||||    
T  21694950 aaaaagaaaagtaagccctcccgtcccttcccctcctaaacc 21694909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 34110840 - 34110803
Alignment:
Q  123 tcccctcccttcccctcctaaaccatcaatccaaacac 160  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  34110840 tcccctctcttcccctcctaaaccctcaatccaaacac 34110803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 34995233 - 34995290
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||  ||| ||||| |||||| ||||||||| |||||| ||||||||    
T  34995233 aaaaagaaaagtaagtcttaccctcacttcccttcctaaaccctcaatctaaacacac 34995290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 24565413 - 24565349
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| |||||||||||| |||||   |||||| ||||||||| || ||||||||||||    
T  24565413 taatttaaaaatgaaaagtaaaccctccccagtcttcccttcctaaaccttccatccaaacacac 24565349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 27735950 - 27735986
Alignment:
Q  126 cctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||||||||| || ||||||||||||    
T  27735950 cctcccttcccctcctaaaccctccatccaaacacac 27735986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 157
Target Start/End: Original strand, 35248862 - 35248922
Alignment:
Q  98 ataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaa 157  Q
    |||||||||||  |||||||||||| |||||||||| || |||||||||| || |||||||    
T  35248862 ataatttaaaattgaaaagtaaaccctcccctccctacctctcctaaaccctccatccaaa 35248922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 45742067 - 45742131
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| |||||||||||  ||||||||||| ||| |||||||| |  ||||||||||||    
T  45742067 taatttaaaaatgaaaagtaaactctcccctccctttcccgcctaaacccttcatccaaacacac 45742131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 41110421 - 41110562
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    ||||||||||||||||||| ||||||||||||||    ||||||| ||| | |||||| |||||||| ||||| ||||   ||||||||||| |||||||    
T  41110421 catattaacatgataaacaatcatataatacttc----aatcacacttaatttattttcgaaaaacatgttatctagtccgtaatttaaaaacgaaaagt 41110516  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||| |||||||||||||  ||||| |||||||||||||||    
T  41110517 aaaccttcctctcccttcccctcacaaaccctcaatccaaacacac 41110562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 24560361 - 24560220
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    ||||||||||||||||||  ||||||||||||||    ||||||| ||| | ||||||||||||||| |||| |||||   ||||||||||| |||||      
T  24560361 catattaacatgataaacgatcatataatacttc----aatcacatttaatttattttagaaaaacatgttacatagtccgtaatttaaaaaagaaaaac 24560266  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| |||||||||||||||||||||||| | |||||||||||||    
T  24560265 aaaccctcccctcccttcccctcctaaacccttaatccaaacacac 24560220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 159
Target Start/End: Complemental strand, 21773926 - 21773788
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattta-aaaagaaaagt 116  Q
    |||||| |||||||||||| ||||||||| ||||    ||||||| ||| | ||||||||||||||| ||||||||||   ||||||| |||||||||||    
T  21773926 catatttacatgataaacaatcatataattcttc----aatcacacttaatttattttagaaaaacatgttatatagtccgtaatttagaaaagaaaagt 21773831  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaaca 159  Q
    | ||| | || ||||||||||||||||||| ||||||||||||    
T  21773830 atacccttccttcccttcccctcctaaaccttcaatccaaaca 21773788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 27542031 - 27542174
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattt-aaaaagaaaagt 116  Q
    ||||||||||||||||||  ||||||||||||||    ||||||| ||| | ||||||||||||| | ||||||||||| ||||||| ||||||||||      
T  27542031 catattaacatgataaacgatcatataatacttc----aatcacagttaatttattttagaaaaatatgttatatagttcataatttaaaaaagaaaaac 27542126  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacacaa 164  Q
    ||||  |||||||||| |||||| |||||| || |||||| |||||||    
T  27542127 aaactctcccctccctgcccctcgtaaaccctcgatccaatcacacaa 27542174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 19 - 160
Target Start/End: Complemental strand, 14898119 - 14897981
Alignment:
Q  19 atattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagta 117  Q
    ||||||||| |||||||  ||||||||||||||    ||||||| ||| | ||||||||||||||| || |||||||   ||||||||||| ||||||||    
T  14898119 atattaacacgataaacgatcatataatacttc----aatcacacttaatttattttagaaaaacatgtcatatagtctgtaatttaaaaaagaaaagta 14898024  T
Q  118 aaccttcccctcccttcccctcctaaaccatcaatccaaacac 160  Q
    ||  |||| |||||||||||||||||||  |||||||||||||    
T  14898023 aaatttcctctcccttcccctcctaaactctcaatccaaacac 14897981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 162
Target Start/End: Original strand, 25655102 - 25655213
Alignment:
Q  52 cttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatca 150  Q
    ||||||||||| ||| | ||||||||||||||| ||||||||||   ||||||||||| ||||  |||||| |||||||||||| |||| | |||| |||    
T  25655102 cttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaatttaaaaatgaaagttaaaccctcccctcccttctcctcttcaaccctca 25655201  T
Q  151 atccaaacacac 162  Q
    ||||||||||||    
T  25655202 atccaaacacac 25655213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 52 - 161
Target Start/End: Complemental strand, 46205000 - 46204890
Alignment:
Q  52 cttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattta-aaaagaaaagtaaaccttcccctcccttcccctcctaaaccatca 150  Q
    ||||||||||| ||| | ||||||||||||||| ||||||||||| |||||||| |||||||||||||||  || | || |||| ||| ||||||| ||     
T  46205000 cttcaatcacacttaatttattttagaaaaacatgttatatagttcataatttaaaaaagaaaagtaaacactctcatctcttctcctgctaaaccctcg 46204901  T
Q  151 atccaaacaca 161  Q
    |||||||||||    
T  46204900 atccaaacaca 46204890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 28582661 - 28582750
Alignment:
Q  74 ttagaaaaacaagttatatagttgataatttaaaa-agaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||||| ||   |||||||||| ||||||||||||| |||||||||||||||||||||| | ||| |||||||||||    
T  28582661 ttagaaaaacatgttatatcgtccgtaatttaaaaaagaaaagtaaaccctcccctcccttcccctcctaaatcctcagtccaaacacac 28582750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 55428556 - 55428619
Alignment:
Q  99 taatttaaa-aagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacaca 161  Q
    ||||||||| |||||||||||| | |||||||||||||||||||||||| ||||||||||||||    
T  55428556 taatttaaagaagaaaagtaaatcatcccctcccttcccctcctaaaccctcaatccaaacaca 55428619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 18654700 - 18654842
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaaga--aaag 115  Q
    |||||||||||||||||   ||||||||||||||    ||| ||| ||| | ||||||||| ||||| ||||||||||   ||||||||||| |  |||     
T  18654700 catattaacatgataaatgatcatataatacttc----aattacacttaatttattttagagaaacatgttatatagtccgtaatttaaaaaaagtaaaa 18654795  T
Q  116 taaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
     ||||  |||||||||||||||||||||||| ||||| |||||||||    
T  18654796 caaactctcccctcccttcccctcctaaaccctcaattcaaacacac 18654842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 142
Target Start/End: Original strand, 30200239 - 30200312
Alignment:
Q  70 tattttagaaaaacaagttatatagttgataatttaaaa-agaaaagtaaaccttcccctcccttcccctccta 142  Q
    ||||||||||||||| ||||||||||   |||||||||| ||||||||||||| | ||||||||||||||||||    
T  30200239 tattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagtaaacccttccctcccttcccctccta 30200312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 34641174 - 34641231
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||||| || |||||||||||||||||||||||| || ||||||||||||    
T  34641174 aaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaacacac 34641231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 41110388 - 41110324
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||| | || ||||||||||||    
T  41110388 taatttaaaaatgaaaagtaaaccttctcctcccttcccctcctaaatcctccatccaaacacac 41110324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 159
Target Start/End: Original strand, 220545 - 220635
Alignment:
Q  70 tattttagaaaaacaagttatatagttgataatttaaaa-agaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaaca 159  Q
    ||||||||||||||| |||| |||||   |||||||||| |||||||||||   |||||||||||| ||||||||||| || |||||||||    
T  220545 tattttagaaaaacatgttacatagtccgtaatttaaaaaagaaaagtaaattctcccctcccttctcctcctaaaccctccatccaaaca 220635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 56 - 127
Target Start/End: Complemental strand, 651841 - 651769
Alignment:
Q  56 aatcacaattagtgtattttagaaaaacaagttatatagttgataattta-aaaagaaaagtaaaccttcccc 127  Q
    ||||||| ||| | ||||||||||||||| ||||||||||  |||||||| |||||||||||||||| |||||    
T  651841 aatcacacttaatttattttagaaaaacatgttatatagtctataatttaaaaaagaaaagtaaaccctcccc 651769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 5903606 - 5903552
Alignment:
Q  108 aagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||||| |||||| |||||||||| |||| | |||||||||||||||    
T  5903606 aagaaaagtaaaccctcccctgccttcccctcttaaatcctcaatccaaacacac 5903552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 6803385 - 6803443
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacaca 163  Q
    |||||||||| |||||  || |||| |||||||||||||||| ||||||||||||||||    
T  6803385 aaaaagaaaattaaactctctcctctcttcccctcctaaaccttcaatccaaacacaca 6803443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 24253906 - 24253963
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||| | | |||||||||||||| ||||||| || ||||||||||||    
T  24253906 aaaaagaaaagtaaatccttccctcccttccccttctaaaccctccatccaaacacac 24253963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 26135981 - 26136022
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaacc 146  Q
    ||||||||||||||||| ||| ||||||||||||||||||||    
T  26135981 aaaaagaaaagtaaaccctccactcccttcccctcctaaacc 26136022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 27541998 - 27541937
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaaca 159  Q
    ||||||||||| |||| || |||| || ||||||||||||||||||||| ||||||||||||    
T  27541998 taatttaaaaatgaaatgtgaaccatctcctcccttcccctcctaaaccctcaatccaaaca 27541937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 12790432 - 12790377
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacaca 161  Q
    |||||||||||||||||| || ||| ||||| |||||||||| ||||||||||||||    
T  12790432 aaaaagaaaagtaaacct-cctctctcttcctctcctaaaccctcaatccaaacaca 12790377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 17474390 - 17474446
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacaca 161  Q
    ||||| |||||| |||  ||||||||||||||||||| |||| ||||||||||||||    
T  17474390 aaaaataaaagttaactctcccctcccttcccctcctcaaccctcaatccaaacaca 17474446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 21090276 - 21090312
Alignment:
Q  126 cctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||| ||||||||||||||||||||||||||    
T  21090276 cctcccttcctctcctaaaccatcaatccaaacacac 21090312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 24560394 - 24560458
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| |||||||||||  |||| ||| ||||||||||||||| || ||||||||||||    
T  24560394 taatttaaaaatgaaaagtaaactctcccatccgttcccctcctaaaccctccatccaaacacac 24560458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 28581253 - 28581189
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||| |||||| ||||||||||||| || ||||||| || ||||||||||||    
T  28581253 taatttaaaaatgaaaactaaaccctcccctcccttcctcttctaaaccctccatccaaacacac 28581189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 14897949 - 14897898
Alignment:
Q  111 aaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||| | |||||||||||||||||||  |||||||||| ||||    
T  14897949 aaaagtaaacctttctctcccttcccctcctaaactctcaatccaaaaacac 14897898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 25655030 - 25654991
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaa 144  Q
    |||| |||||||||||| ||||||||||||||||||||||    
T  25655030 aaaatgaaaagtaaaccctcccctcccttcccctcctaaa 25654991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 42772086 - 42772047
Alignment:
Q  123 tcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  42772086 tcccctcccttcccctcttaaaccttcaatccaaacacac 42772047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 162
Target Start/End: Original strand, 44412563 - 44412602
Alignment:
Q  123 tcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  44412563 tcccctcccttcccctcacaaaccatcaatccaaacacac 44412602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 52185160 - 52185060
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaa-caagttatatagttgataatttaaaaa-gaaaag 115  Q
    ||||||||||||||||||| ||||||||||||||    ||| | | ||| | ||||||||||||| || |||||||| ||  ||||||||||| ||||||    
T  52185160 catattaacatgataaacaatcatataatacttc----aattatatttaatttattttagaaaaaacatgttatataatttgtaatttaaaaacgaaaag 52185065  T
Q  116 taaac 120  Q
    |||||    
T  52185064 taaac 52185060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 24253762 - 24253724
Alignment:
Q  124 cccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  24253762 cccctccctttccctcctaaaccctcaatccaaacacac 24253724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 160
Target Start/End: Complemental strand, 52474059 - 52473920
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    |||||||| |||||||||||||||||||||||||    |||||||  || | ||||||| || |||| |||||||| |   ||||||||||| ||||| |    
T  52474059 catattaatatgataaacagtcatataatacttc----aatcacatgtaatttattttaaaataacatgttatataatccgtaatttaaaaaagaaaatt 52473964  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacac 160  Q
     |||  |||| |  |||||||||| ||||  |||||||||||||    
T  52473963 gaactctcccatttcttcccctcccaaactctcaatccaaacac 52473920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 17474266 - 17474209
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||||||| || || |  ||| |||||||||||| |||||||||||||||    
T  17474266 aaaaagaaaagtaaacttttccattactttccctcctaaaccctcaatccaaacacac 17474209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 41040050 - 41040164
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    ||||||||||||||||||| ||||||||||||||    ||||||  ||| | ||||||| |||| || ||||| || |   ||||||||||  |||||||    
T  41040050 catattaacatgataaacaatcatataatacttc----aatcacgcttactttattttaaaaaatcatgttatctaatccgtaatttaaaagcgaaaagt 41040145  T
Q  117 aaaccttcccctcccttcc 135  Q
    ||||| || ||||||||||    
T  41040146 aaaccctctcctcccttcc 41040164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 31664427 - 31664391
Alignment:
Q  125 ccctcccttcccctcctaaaccatcaatccaaacaca 161  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  31664427 ccctcccttcccctcttaaaccctcaatccaaacaca 31664391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 31931969 - 31932005
Alignment:
Q  125 ccctcccttcccctcctaaaccatcaatccaaacaca 161  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  31931969 ccctcccttcccctcttaaaccctcaatccaaacaca 31932005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 37102348 - 37102380
Alignment:
Q  130 ccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||||| |||||||||||||||    
T  37102348 ccttcccctcctaaaccctcaatccaaacacac 37102380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 52474092 - 52474140
Alignment:
Q  99 taatttaaaaagaaaa-gtaaaccttcccctcccttcccctcctaaacc 146  Q
    ||||||||||| |||| ||||||| ||| ||||||||||||||||||||    
T  52474092 taatttaaaaataaaaagtaaaccctcctctcccttcccctcctaaacc 52474140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 162
Target Start/End: Complemental strand, 6698 - 6587
Alignment:
Q  52 cttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatca 150  Q
    ||||||||||| | | | |||||||||| |||||||||||||||   ||||||||||| |||||||||||| |||||||||||| ||||||||| | |||    
T  6698 cttcaatcacactaaatttattttagaataacaagttatatagtctgtaatttaaaaaagaaaagtaaaccctcccctcccttctcctcctaaaacttca 6599  T
Q  151 atccaaacacac 162  Q
    ||||||||||||    
T  6598 atccaaacacac 6587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 162
Target Start/End: Original strand, 19278139 - 19278278
Alignment:
Q  19 atattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaagaaaagtaa 118  Q
    |||||||||||||||||  |||||| |||||||    ||||| | | | | ||||||||||||||| ||||||||||   |||||||||||  ||| |||    
T  19278139 atattaacatgataaacgatcatatgatacttc----aatcagactaaatttattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaataa 19278234  T
Q  119 accttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||| |||||||||||||||||||||||  |||||||||||||||    
T  19278235 accctcccctcccttcccctcctaaactctcaatccaaacacac 19278278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 52 - 162
Target Start/End: Original strand, 12811110 - 12811221
Alignment:
Q  52 cttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaa-aagaaaagtaaaccttcccctcccttcccctcctaaaccatca 150  Q
    ||||||||||| ||| | |||||||||||||||  |||||||||   ||||||||| ||||||||||| || ||||||| |||||| ||||||||| |||    
T  12811110 cttcaatcacacttaatttattttagaaaaacatattatatagtctctaatttaaagaagaaaagtaatccctcccctctcttcccatcctaaaccctca 12811209  T
Q  151 atccaaacacac 162  Q
    ||||||||||||    
T  12811210 atccaaacacac 12811221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 4097612 - 4097754
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaa-gttatatagttgataatttaaaa-agaaaag 115  Q
    ||||||||||||||||||  ||||||||||||||    ||||||| ||| | |||||| |||||| || ||||||| ||   |||||||||| |||||||    
T  4097612 catattaacatgataaacgatcatataatacttc----aatcacacttaatttattttggaaaaaaaatgttatattgtccgtaatttaaaaaagaaaag 4097707  T
Q  116 taaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    | |||| | ||||||||||||||| |||||| |||||||||||||||    
T  4097708 tgaacccttccctcccttcccctcttaaaccctcaatccaaacacac 4097754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 30487405 - 30487546
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaag-aaaagt 116  Q
    ||||||||||||||||||| | ||||||||||||    ||||||| ||  | ||||||| ||||||| ||||||||||   || ||||||||  |||| |    
T  30487405 catattaacatgataaacaataatataatacttc----aatcacacttgatttattttataaaaacatgttatatagtccgtagtttaaaaaataaaact 30487500  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| ||| |||||||||||||||||||| |||||| ||||||||    
T  30487501 aaaccctccactcccttcccctcctaaaccctcaatcgaaacacac 30487546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 31849254 - 31849113
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    ||||||||| ||||||||| | ||||||||||||    ||||||| ||  | ||||||||||||| | ||||||||||   || |||||||| ||||| |    
T  31849254 catattaacgtgataaacaataatataatacttc----aatcacacttgatttattttagaaaaatatgttatatagtctgtagtttaaaaaagaaaact 31849159  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| ||||||||||||||||| |||||| ||||||| |||||||    
T  31849158 aaaccctcccctcccttcccctcttaaaccctcaatcctaacacac 31849113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 162
Target Start/End: Complemental strand, 33236095 - 33235954
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    ||||||||||||||||||| ||||||||| ||||  ||| ||  ||||    ||||||||||||||| ||||||||||   ||||||||||| |||||||    
T  33236095 catattaacatgataaacaatcatataattcttcaatcagtcttaatt----tattttagaaaaacatgttatatagtccgtaatttaaaaaagaaaagt 33236000  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||| |||| |||||||| || |||||| | |||||||||| ||||    
T  33235999 aaactttccactcccttctccacctaaatcctcaatccaaatacac 33235954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 9721205 - 9721141
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||| |||||| |||||||||||||||||||||||| |||||||||||||||    
T  9721205 taatttaaaaatgaaaaataaaccctcccctcccttcccctcctaaaccttcaatccaaacacac 9721141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 21606944 - 21607085
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    ||||||||||||||||||  || |||||||||||    | ||||| ||  | |||||||||||||||  | ||||||||  ||||||||||| |||| ||    
T  21606944 catattaacatgataaacgatcgtataatacttc----agtcacactttatttattttagaaaaacatataatatagtttgtaatttaaaaacgaaatgt 21607039  T
Q  117 aaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||| |||  ||| |||||||||||||||| |||||||||||||||    
T  21607040 aaacattcatctctcttcccctcctaaaccctcaatccaaacacac 21607085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 10818289 - 10818232
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||| |||||  |||||||||||||||||||||||| |||||||||||||||    
T  10818289 aaaaagaaaaataaacaatcccctcccttcccctcctaaaccctcaatccaaacacac 10818232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 14515533 - 14515476
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||  ||||| |||||||||||||||||||||||| |||||||||||||||    
T  14515533 aaaaagaaaaacaaaccctcccctcccttcccctcctaaaccctcaatccaaacacac 14515476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 9719098 - 9719034
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| ||||| |||| | |||||||||||||||||||||||| |||||||||||||||    
T  9719098 taatttaaaaatgaaaaataaatcctcccctcccttcccctcctaaaccctcaatccaaacacac 9719034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 10818393 - 10818457
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||| |||||||||||| |||||||||| ||||||||||||  |||||||||||||||    
T  10818393 taatttaaaaatgaaaagtaaaccctcccctccctacccctcctaaactctcaatccaaacacac 10818457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 162
Target Start/End: Complemental strand, 33041584 - 33041473
Alignment:
Q  52 cttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatca 150  Q
    ||||||||||| ||| | ||||||| |||||||  |||||||||  |||||||||||| ||||| ||||   |||||||| |||| ||||||||||  ||    
T  33041584 cttcaatcacacttaatttattttaaaaaaacacattatatagtctataatttaaaaatgaaaaataaattctcccctcctttcctctcctaaaccccca 33041485  T
Q  151 atccaaacacac 162  Q
    ||||||||||||    
T  33041484 atccaaacacac 33041473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 26318489 - 26318547
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacaca 163  Q
    ||||||||||||||| ||||||||||||| |||||||||||  || |||||||||||||    
T  26318489 aaaaagaaaagtaaatcttcccctccctttccctcctaaactctccatccaaacacaca 26318547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 162
Target Start/End: Complemental strand, 2893742 - 2893633
Alignment:
Q  54 tcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaat 152  Q
    ||||||||| ||| | ||||||||||||||| ||||||||||   || |||||||| |||||||||||  ||| |||  ||||| ||| ||||| |||||    
T  2893742 tcaatcacacttaatttattttagaaaaacatgttatatagtctgtagtttaaaaacgaaaagtaaactctccgctcatttcccttcccaaaccctcaat 2893643  T
Q  153 ccaaacacac 162  Q
    ||||||||||    
T  2893642 ccaaacacac 2893633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 164
Target Start/End: Original strand, 30850062 - 30850155
Alignment:
Q  72 ttttagaaaaacaagttatatagttgataatttaaaa-agaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacacaa 164  Q
    ||||| |||||||  ||||||| || ||||||||||| | ||||||||||  |||| || ||| |||||||||||| |||||||||||||||||    
T  30850062 ttttaaaaaaacatattatataattcataatttaaaataaaaaagtaaactctcccttctctttccctcctaaaccctcaatccaaacacacaa 30850155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 23091062 - 23090998
Alignment:
Q  99 taatttaaaa-agaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||| | |||||| | || |||||||||||||||||||||||| |||||||||||||||    
T  23091062 taatttaaaagataaaagtgagccctcccctcccttcccctcctaaaccttcaatccaaacacac 23090998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 105 - 157
Target Start/End: Original strand, 23091143 - 23091195
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaa 157  Q
    |||||||||||||| || |||||||||||||||||||||||| || |||||||    
T  23091143 aaaaagaaaagtaagccctcccctcccttcccctcctaaaccctccatccaaa 23091195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 30487361 - 30487309
Alignment:
Q  110 gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||| |||| |||||||||||||||||||||||| || ||||||||||||    
T  30487361 gaaaagtgaaccctcccctcccttcccctcctaaaccctccatccaaacacac 30487309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 159
Target Start/End: Original strand, 16738144 - 16738233
Alignment:
Q  70 tattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaaca 159  Q
    |||||||||||||||  ||||||| |   ||||||||||| |||||||||||  |||||||| ||||| ||||||||| ||||||||||||    
T  16738144 tattttagaaaaacattttatataatctgtaatttaaaaaagaaaagtaaactctcccctcc-ttcccatcctaaaccctcaatccaaaca 16738233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 9719214 - 9719271
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||| ||||||  |||||| ||||||||| |||||| |||||||||||||||    
T  9719214 aaaaagaaaattaaacccacccctctcttcccctcataaaccctcaatccaaacacac 9719271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 16738064 - 16737999
Alignment:
Q  98 ataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||| |||||||||| ||||||||| ||||| ||| |||||| || ||||||||||||    
T  16738064 ataatttaaaaacgaaaagtaaatcttcccctctcttcctctcttaaaccctccatccaaacacac 16737999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 15323264 - 15323228
Alignment:
Q  126 cctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||||||||| |||||||||||||||    
T  15323264 cctcccttcccctcctaaaccctcaatccaaacacac 15323228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 15353403 - 15353367
Alignment:
Q  126 cctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||||||||| |||||||||||||||    
T  15353403 cctcccttcccctcctaaaccctcaatccaaacacac 15353367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 2892708 - 2892844
Alignment:
Q  23 taacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataattt-aaaaagaaaagtaaacc 121  Q
    |||||||||||||| ||||||||||     |||||||||| | | | ||||||||||||||  ||||||||||   || ||| |||||||||||||||      
T  2892708 taacatgataaacaatcatataata----tttcaatcacactaaatttattttagaaaaacgtgttatatagtccgtagtttaaaaaagaaaagtaaatt 2892803  T
Q  122 ttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
     |||||||||||| ||| | ||||| || || |||||||||    
T  2892804 ctcccctcccttcgccttccaaaccctccattcaaacacac 2892844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 162
Target Start/End: Original strand, 9051734 - 9051773
Alignment:
Q  123 tcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||||| |||||| |||||||||||||||    
T  9051734 tcccctcccttcccctcttaaaccctcaatccaaacacac 9051773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 19278101 - 19278039
Alignment:
Q  99 taatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacac 160  Q
    ||||||||||| |||||||||||  || ||| ||||||||||||||||| || ||||||||||    
T  19278101 taatttaaaaatgaaaagtaaactctctccttccttcccctcctaaaccctccatccaaacac 19278039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 665908 - 665844
Alignment:
Q  98 ataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||| ||||| | |||| ||||||| |||||||||||||||| || ||||||||||||    
T  665908 ataatttaaaaatgaaaaatgaaccctcccctcacttcccctcctaaaccctc-atccaaacacac 665844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 4097295 - 4097238
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||| ||||||||||  ||  || ||||||||||||||||| |||||||||||||||    
T  4097295 aaaaataaaagtaaactctcatcttccttcccctcctaaaccctcaatccaaacacac 4097238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 14515647 - 14515712
Alignment:
Q  98 ataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||| ||||  |||||| |||| | ||||||||||||||||| || ||||||||||||    
T  14515647 ataatttaaaaatgaaatctaaaccctccctttccttcccctcctaaaccctccatccaaacacac 14515712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 34176631 - 34176590
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaacc 146  Q
    ||||||||||||||  ||||||||||| ||||||||||||||    
T  34176631 aaaaagaaaagtaagtcttcccctcccatcccctcctaaacc 34176590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 71 - 162
Target Start/End: Complemental strand, 1267 - 1175
Alignment:
Q  71 attttagaaaaacaagttatatagttgataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||| |||| |||| |||||   ||||||||||| |||||||||||  ||||||| |||||||||||||||| |||||||||||||||    
T  1267 attttagaataacatgttacatagtccgtaatttaaaaaagaaaagtaaactctcccctctcttcccctcctaaaccctcaatccaaacacac 1175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 3207 - 3150
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    ||||||||||||||||  |||||||||||||||||||||||  |||||||||||||||    
T  3207 aaaaagaaaagtaaactctcccctcccttcccctcctaaactctcaatccaaacacac 3150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 242400 - 242456
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacaca 161  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||| |||||||||||    
T  242400 aaaaagaaaagtaaaccctcccctcccttccccttataaaccatccatccaaacaca 242456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 16396 - 16503
Alignment:
Q  18 catattaacatgataaacagtcatataatacttccttcaatcacaattagtgtattttagaaaaacaagttatatagttgataatttaaaaa-gaaaagt 116  Q
    ||||||||||||||||||| ||||||||||    ||||||||||| ||| | ||||||||| ||||| ||||||||||   | | ||||||| |||||||    
T  16396 catattaacatgataaacaatcatataata----cttcaatcacacttaatttattttagacaaacatgttatatagtccgtgagttaaaaacgaaaagt 16491  T
Q  117 aaaccttcccct 128  Q
    ||||| ||||||    
T  16492 aaaccctcccct 16503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 16364 - 16302
Alignment:
Q  98 ataatttaaaaa-gaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaaca 159  Q
    |||||||||||| |||||||||||| |||||||| || |||||||||||| || |||||||||    
T  16364 ataatttaaaaatgaaaagtaaaccctcccctccttttccctcctaaaccctccatccaaaca 16302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 162
Target Start/End: Original strand, 17724 - 17779
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacacac 162  Q
    |||||||||||||||||  |||||||||||| |||||||||| || ||||||||||||    
T  17724 aaaaagaaaagtaaacc--cccctcccttccactcctaaaccctccatccaaacacac 17779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 184791 - 184847
Alignment:
Q  105 aaaaagaaaagtaaaccttcccctcccttcccctcctaaaccatcaatccaaacaca 161  Q
    |||||||| |||||||| |||| |||||| |||||||||||| || |||||||||||    
T  184791 aaaaagaatagtaaaccctcccttccctttccctcctaaaccctccatccaaacaca 184847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University