View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20665_high_189 (Length: 233)
Name: NF20665_high_189
Description: NF20665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20665_high_189 |
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Alignment Details
Target: chr7 (Bit Score: 164; Significance: 9e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 15 - 217
Target Start/End: Original strand, 31255880 - 31256095
Alignment:
| Q |
15 |
aatataatagcatgttagtattgattattttattt-------------aggaaatcgcagccacatttgatctccattctttcttgtttggtccacactc |
101 |
Q |
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| T |
31255880 |
aatataatagcatgttagtattgattattttattttatttaaagttcgaggaaatcgcagccacatttgatctccattctttcttgtttggtccacactc |
31255979 |
T |
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| Q |
102 |
cacacctctattttttaatccaacttttttgaaaagaccattcctcatgaaagtaggaagggatgcataactataaattctgtattcgtatcctacaaga |
201 |
Q |
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| T |
31255980 |
cacacctctattttttaatccaacttttttgaaaagaccattccccatgaaagtaggaagggatgcataactataaattctgtattcgtatcctacaaga |
31256079 |
T |
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| Q |
202 |
tccagcacttgaataa |
217 |
Q |
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|||||| ||||||||| |
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| T |
31256080 |
tccagcccttgaataa |
31256095 |
T |
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