View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20665_high_73 (Length: 333)
Name: NF20665_high_73
Description: NF20665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20665_high_73 |
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Alignment Details
Target: chr1 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 34365680 - 34366008
Alignment:
| Q |
1 |
ccgtctcaccactttcttgcatttcgccaactattccccactatatatacaagttctaagttcttaggtctcataaaccaaactttatattccttaataa |
100 |
Q |
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| T |
34365680 |
ccgtctcaccactttcttgcattttgccaactattccccactatatatacaagttctaagttcttaggtctcataaaccaaactttatattccttaataa |
34365779 |
T |
|
| Q |
101 |
atacccttaattgtttgaagatggtgtatacatcatctatgaagtcattgaaaatggtaatggttaaattgatgacattttttatgctaatagaggtgat |
200 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34365780 |
atacccttaattgtttgaagatgatgtatacatcatctatgaagtcattgaaaatggtaatggttaaattgatgacattttttatgctaatagaggtgat |
34365879 |
T |
|
| Q |
201 |
tacatgccaattcgggttcggattcgggggagggttaaacatgaactactatttgatgagttgcccttttgttgaaccagttgttaagaacatagtgaat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34365880 |
tacatgccaattcgggttcggattcgggggagggttaaacatgaactactatttgatgagttgcccttttgttgaaccagttgttaagaacatagtgaat |
34365979 |
T |
|
| Q |
301 |
agagctttggacaatgatcccacctttgc |
329 |
Q |
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|||||||||||||||||||||||| |||| |
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| T |
34365980 |
agagctttggacaatgatcccacccttgc |
34366008 |
T |
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