View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20665_high_77 (Length: 322)
Name: NF20665_high_77
Description: NF20665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20665_high_77 |
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Alignment Details
Target: chr4 (Bit Score: 176; Significance: 8e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 65 - 252
Target Start/End: Original strand, 52930359 - 52930546
Alignment:
| Q |
65 |
tagagcatgttgatccaaaaacggatcaattattttcattttaattttcattattatattaataatatatgcggttgcggtatatgatgacagacaaatg |
164 |
Q |
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| T |
52930359 |
tagagcatgttgatccaaaaacggatcaattattttcattttcattttcattattatattaataatatatgcggttgcggtatatgatgacagacaaatg |
52930458 |
T |
|
| Q |
165 |
acattttgcgacctaaaaaatgtcagaagtcatttccttattgttctctttctgtctgtgaagttaagaggcgctcgcgatcacagtt |
252 |
Q |
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| T |
52930459 |
acattttgcgacctaaaaaatgtcagaagtcatttccttattgttctctttctgtctgtaaagttaagaggcggtcgcgatcacagtt |
52930546 |
T |
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