View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20665_high_83 (Length: 312)
Name: NF20665_high_83
Description: NF20665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20665_high_83 |
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Alignment Details
Target: chr8 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 24 - 304
Target Start/End: Original strand, 40936189 - 40936469
Alignment:
| Q |
24 |
gcctcctgctctgacatccttcctttccttcaacctcttgatccaatcatcttagcccaatggcaacctcatcctcctagccaccccctcccaacacaac |
123 |
Q |
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| T |
40936189 |
gcctcctgctctgacgtccttcctttccttcaacctcttgatccaatcatcttagcccaatggcaacctcatcctcctacccaccccctcccaacacaac |
40936288 |
T |
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| Q |
124 |
atagctctcagaactctcttgctcctttagcaatgatgacctcatcctcctcgcagccacctccaactacaacctccacctagccctttgaactttaact |
223 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
40936289 |
atagctctcagaactctcttgctcctttagcaatgatgacctcatcctcctcgcagccacctccaaccacaacctccacctagccctttgaactttaact |
40936388 |
T |
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| Q |
224 |
acctccctctatcagagtatgtgcagcaaacatccacgccgcagcaaacacccagggagaagaaaaatgcaagtctgtgct |
304 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40936389 |
acctccctctatcagagtatgtgcagcaaacatccacgccgcagcaaacacccagggagaagaaaaatgcaagtctgtgct |
40936469 |
T |
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