View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20665_low_118 (Length: 264)
Name: NF20665_low_118
Description: NF20665
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20665_low_118 |
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Alignment Details
Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 17 - 241
Target Start/End: Complemental strand, 37032405 - 37032182
Alignment:
| Q |
17 |
ttttttccagttatattgaccctacatggaatctagaaaaaatttaagctttgaatttaaaagctgtagaattgaagtttaaagctttggaccacatata |
116 |
Q |
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| T |
37032405 |
ttttttccagttatattgacc-tacatggaatctagaaaaaatttaagctttgaatttaaaagctgtagaattgaagtttaaagctttggaccacatata |
37032307 |
T |
|
| Q |
117 |
tacatgttatagtctggtttgtaccatcttggtctaacataatgttagaagaacaatgctatgtagtactcattcacctactttaaatttatgtataact |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37032306 |
tacatgttatagtctggtttgtaccatcttggtctaacataatgttagaagaacaatgctatgtagtactcattcacctactttaaatttatgtataact |
37032207 |
T |
|
| Q |
217 |
cccaaaacagatcatatttaggtgt |
241 |
Q |
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||||||||||||||||||||||||| |
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| T |
37032206 |
cccaaaacagatcatatttaggtgt |
37032182 |
T |
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