View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20667_low_9 (Length: 250)
Name: NF20667_low_9
Description: NF20667
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20667_low_9 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 13 - 250
Target Start/End: Complemental strand, 12306097 - 12305860
Alignment:
| Q |
13 |
aatatatatgtggtaggggctaatatcctaagaaataacaattcaagtgccaagttaacattccaattaaaataagaagtatgaagttactaagaactgc |
112 |
Q |
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| T |
12306097 |
aatatatatgtggtaggggctaatatcctaagaaataacaattcaagtgccaagttaacattccaattaaaataagaagtatgaagttactaagaactgc |
12305998 |
T |
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| Q |
113 |
tttaaactatagtaatcttcatttcttcatcgattgaatataaaaaagaaaagcttctgtctccattgaagtataaatcatgaatatcgaaatccataaa |
212 |
Q |
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| T |
12305997 |
tttaaactatagtaatcttcatttcttcatcgattgaatataaaaaagaaaagcttctgtcttcattgaagtataaatcatgaatatcgaaatccataaa |
12305898 |
T |
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| Q |
213 |
aagaagtcagtgtttttgtagcagaacttcatgtgaat |
250 |
Q |
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||||||||||||||||||||||| |||||||||||||| |
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| T |
12305897 |
aagaagtcagtgtttttgtagcataacttcatgtgaat |
12305860 |
T |
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