View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2066_high_3 (Length: 520)

Name: NF2066_high_3
Description: NF2066
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2066_high_3
NF2066_high_3
[»] chr1 (50 HSPs)
chr1 (5-503)||(6101853-6102354)
chr1 (55-136)||(2295165-2295247)
chr1 (67-162)||(38001639-38001734)
chr1 (62-172)||(47498766-47498876)
chr1 (62-136)||(49938816-49938891)
chr1 (62-148)||(1432572-1432659)
chr1 (62-172)||(6292526-6292636)
chr1 (66-172)||(36514606-36514713)
chr1 (62-171)||(11941296-11941406)
chr1 (70-176)||(4768763-4768870)
chr1 (55-119)||(33204313-33204377)
chr1 (119-175)||(35669002-35669057)
chr1 (90-199)||(45975693-45975806)
chr1 (98-172)||(51929501-51929576)
chr1 (91-176)||(27820152-27820237)
chr1 (57-172)||(38115998-38116115)
chr1 (88-172)||(38480526-38480612)
chr1 (108-172)||(10199381-10199445)
chr1 (62-166)||(14576580-14576685)
chr1 (56-148)||(15943017-15943110)
chr1 (119-172)||(38503449-38503502)
chr1 (61-109)||(46504143-46504192)
chr1 (140-203)||(14629971-14630037)
chr1 (68-135)||(38247397-38247465)
chr1 (62-133)||(50644181-50644253)
chr1 (62-172)||(3233941-3234052)
chr1 (62-172)||(3887558-3887669)
chr1 (62-136)||(5720994-5721069)
chr1 (82-132)||(34795392-34795443)
chr1 (63-172)||(37593611-37593721)
chr1 (62-132)||(37617391-37617462)
chr1 (119-170)||(37811887-37811937)
chr1 (78-176)||(38018306-38018405)
chr1 (62-163)||(27146181-27146283)
chr1 (142-203)||(34290235-34290299)
chr1 (119-173)||(35925722-35925775)
chr1 (97-162)||(38170652-38170717)
chr1 (71-128)||(39658444-39658502)
chr1 (64-145)||(39976138-39976220)
chr1 (88-172)||(27145688-27145772)
chr1 (119-172)||(31118076-31118128)
chr1 (68-136)||(43990326-43990395)
chr1 (62-94)||(2522708-2522740)
chr1 (106-165)||(4549888-4549947)
chr1 (62-94)||(30259412-30259444)
chr1 (124-172)||(30815643-30815690)
chr1 (97-172)||(31517702-31517777)
chr1 (140-172)||(32859951-32859983)
chr1 (128-172)||(44815297-44815340)
chr1 (97-176)||(51695456-51695536)
[»] chr3 (37 HSPs)
chr3 (62-202)||(21367667-21367811)
chr3 (62-166)||(24085264-24085369)
chr3 (62-176)||(31365235-31365350)
chr3 (63-163)||(402469-402570)
chr3 (61-202)||(39602136-39602280)
chr3 (62-174)||(31365114-31365227)
chr3 (67-167)||(46778122-46778223)
chr3 (68-203)||(46886624-46886763)
chr3 (55-166)||(26878239-26878351)
chr3 (65-172)||(34610735-34610843)
chr3 (70-172)||(30443926-30444029)
chr3 (62-203)||(25447171-25447315)
chr3 (62-136)||(20257605-20257681)
chr3 (63-136)||(3776317-3776392)
chr3 (55-163)||(33046717-33046829)
chr3 (62-138)||(22892-22969)
chr3 (62-171)||(26911619-26911735)
chr3 (62-143)||(26990151-26990232)
chr3 (94-134)||(34637943-34637984)
chr3 (62-166)||(46031029-46031134)
chr3 (62-133)||(584118-584190)
chr3 (69-136)||(22203499-22203566)
chr3 (62-148)||(5436129-5436216)
chr3 (62-172)||(20880509-20880620)
chr3 (62-136)||(39980798-39980873)
chr3 (98-172)||(50952366-50952440)
chr3 (55-164)||(9832674-9832784)
chr3 (95-176)||(26878146-26878228)
chr3 (63-166)||(42747709-42747814)
chr3 (98-173)||(23808027-23808102)
chr3 (54-86)||(28779439-28779471)
chr3 (62-172)||(32582777-32582881)
chr3 (99-201)||(37273135-37273240)
chr3 (97-172)||(43115089-43115164)
chr3 (62-136)||(44014724-44014800)
chr3 (140-172)||(45432944-45432976)
chr3 (140-172)||(45555009-45555041)
[»] chr5 (46 HSPs)
chr5 (62-200)||(39594809-39594951)
chr5 (55-203)||(7984968-7985120)
chr5 (67-148)||(10640010-10640092)
chr5 (63-203)||(12425570-12425716)
chr5 (62-167)||(41419357-41419463)
chr5 (62-203)||(39105463-39105609)
chr5 (62-144)||(11064727-11064810)
chr5 (50-166)||(1464934-1465051)
chr5 (62-201)||(9202674-9202817)
chr5 (62-133)||(9107162-9107234)
chr5 (62-167)||(41534479-41534582)
chr5 (62-166)||(16937809-16937914)
chr5 (67-172)||(11700196-11700301)
chr5 (70-119)||(19460260-19460309)
chr5 (106-173)||(499702-499769)
chr5 (63-166)||(40426804-40426908)
chr5 (119-166)||(4625767-4625814)
chr5 (62-176)||(6096576-6096691)
chr5 (67-172)||(42100344-42100450)
chr5 (55-156)||(42583261-42583363)
chr5 (123-176)||(1899183-1899235)
chr5 (119-172)||(8334604-8334657)
chr5 (72-172)||(19460323-19460423)
chr5 (95-166)||(16457938-16458010)
chr5 (97-172)||(17258845-17258920)
chr5 (89-164)||(42228080-42228156)
chr5 (62-176)||(7674677-7674791)
chr5 (62-136)||(7705924-7705999)
chr5 (100-166)||(7808544-7808611)
chr5 (98-172)||(9106854-9106929)
chr5 (62-148)||(12433099-12433186)
chr5 (88-158)||(39248146-39248216)
chr5 (119-173)||(2880532-2880585)
chr5 (95-172)||(29925874-29925952)
chr5 (72-148)||(31038341-31038418)
chr5 (72-148)||(31047565-31047642)
chr5 (119-156)||(39983679-39983716)
chr5 (78-149)||(41981645-41981715)
chr5 (61-136)||(3520646-3520722)
chr5 (221-265)||(7706057-7706101)
chr5 (140-202)||(14182386-14182450)
chr5 (67-119)||(15015930-15015982)
chr5 (144-172)||(19138726-19138754)
chr5 (67-134)||(35445775-35445843)
chr5 (97-172)||(37611177-37611252)
chr5 (97-172)||(37787907-37787982)
[»] chr8 (40 HSPs)
chr8 (66-203)||(27028830-27028971)
chr8 (61-171)||(32840911-32841022)
chr8 (62-172)||(6950355-6950466)
chr8 (62-172)||(33808336-33808446)
chr8 (124-172)||(3536934-3536982)
chr8 (66-137)||(42893420-42893492)
chr8 (78-202)||(1930035-1930163)
chr8 (68-136)||(26771334-26771403)
chr8 (62-202)||(30251380-30251524)
chr8 (95-172)||(29168016-29168094)
chr8 (67-172)||(31716158-31716264)
chr8 (106-172)||(42215277-42215343)
chr8 (67-172)||(1058008-1058113)
chr8 (55-112)||(1892143-1892201)
chr8 (62-166)||(14280347-14280453)
chr8 (55-136)||(35534532-35534614)
chr8 (107-172)||(41606875-41606940)
chr8 (62-119)||(36963280-36963337)
chr8 (62-119)||(38602414-38602471)
chr8 (62-118)||(1096578-1096634)
chr8 (229-293)||(1929968-1930032)
chr8 (66-177)||(27492965-27493077)
chr8 (67-173)||(30191072-30191179)
chr8 (62-136)||(38648420-38648495)
chr8 (68-138)||(38750424-38750495)
chr8 (89-138)||(6881994-6882044)
chr8 (55-93)||(7008711-7008749)
chr8 (89-134)||(28763439-28763485)
chr8 (214-260)||(29205758-29205804)
chr8 (119-172)||(10383918-10383970)
chr8 (61-176)||(11376732-11376848)
chr8 (119-172)||(13459678-13459730)
chr8 (65-110)||(30657706-30657751)
chr8 (97-172)||(30918146-30918220)
chr8 (72-148)||(42043291-42043368)
chr8 (62-136)||(16162828-16162904)
chr8 (62-106)||(16915833-16915877)
chr8 (124-172)||(31751546-31751594)
chr8 (62-129)||(43717860-43717928)
chr8 (140-172)||(44401594-44401626)
[»] chr4 (45 HSPs)
chr4 (62-172)||(52315123-52315234)
chr4 (68-176)||(21731588-21731697)
chr4 (63-166)||(25904150-25904254)
chr4 (66-203)||(17822795-17822936)
chr4 (55-165)||(49939870-49939981)
chr4 (62-173)||(1374502-1374614)
chr4 (62-136)||(7367980-7368056)
chr4 (62-176)||(41336789-41336904)
chr4 (62-136)||(54426112-54426187)
chr4 (63-136)||(29657453-29657527)
chr4 (62-147)||(55437134-55437220)
chr4 (62-172)||(24169296-24169407)
chr4 (62-164)||(27043756-27043859)
chr4 (62-203)||(35571557-35571702)
chr4 (62-136)||(39011054-39011129)
chr4 (71-148)||(1706679-1706757)
chr4 (55-117)||(39691068-39691130)
chr4 (62-158)||(15173229-15173326)
chr4 (119-172)||(24929526-24929578)
chr4 (62-166)||(25571299-25571403)
chr4 (124-169)||(29263406-29263450)
chr4 (139-203)||(679254-679318)
chr4 (97-172)||(1137745-1137820)
chr4 (62-172)||(6987667-6987778)
chr4 (89-172)||(13126529-13126613)
chr4 (62-156)||(28615384-28615478)
chr4 (62-129)||(40174633-40174701)
chr4 (140-203)||(7694015-7694081)
chr4 (62-136)||(21043162-21043237)
chr4 (62-136)||(22030272-22030347)
chr4 (90-172)||(25332808-25332891)
chr4 (88-166)||(49202684-49202763)
chr4 (62-170)||(19304961-19305070)
chr4 (119-172)||(20936214-20936266)
chr4 (140-173)||(35064887-35064920)
chr4 (62-173)||(37575862-37575974)
chr4 (54-87)||(40613290-40613323)
chr4 (97-169)||(50799992-50800064)
chr4 (75-162)||(20719746-20719834)
chr4 (89-172)||(21523591-21523674)
chr4 (63-119)||(29388701-29388757)
chr4 (65-136)||(43506004-43506076)
chr4 (140-172)||(43824316-43824348)
chr4 (69-117)||(44862917-44862965)
chr4 (57-148)||(49003796-49003888)
[»] chr7 (29 HSPs)
chr7 (55-172)||(19302482-19302600)
chr7 (89-172)||(20526882-20526966)
chr7 (62-203)||(20526445-20526590)
chr7 (62-202)||(48470044-48470188)
chr7 (55-166)||(34035956-34036068)
chr7 (78-172)||(19022527-19022622)
chr7 (78-172)||(19214348-19214443)
chr7 (78-203)||(33678779-33678908)
chr7 (54-137)||(22296146-22296231)
chr7 (88-172)||(21568447-21568532)
chr7 (62-119)||(22283572-22283629)
chr7 (64-136)||(25596101-25596174)
chr7 (119-203)||(39967919-39968006)
chr7 (62-202)||(44821959-44822102)
chr7 (60-166)||(25670510-25670617)
chr7 (68-163)||(33601342-33601438)
chr7 (55-203)||(30535562-30535714)
chr7 (62-117)||(33266412-33266467)
chr7 (62-135)||(4970718-4970792)
chr7 (68-172)||(36517612-36517715)
chr7 (67-134)||(46280211-46280282)
chr7 (55-132)||(20234535-20234611)
chr7 (123-172)||(25511659-25511707)
chr7 (97-176)||(28128362-28128436)
chr7 (66-111)||(31744897-31744942)
chr7 (97-173)||(33894659-33894735)
chr7 (62-119)||(45338540-45338597)
chr7 (62-129)||(20526216-20526284)
chr7 (66-172)||(46104497-46104604)
[»] chr6 (23 HSPs)
chr6 (67-172)||(34910340-34910446)
chr6 (78-171)||(31813195-31813289)
chr6 (66-176)||(34404656-34404766)
chr6 (55-136)||(31623619-31623701)
chr6 (68-166)||(2455030-2455126)
chr6 (124-173)||(34939776-34939824)
chr6 (62-173)||(848021-848132)
chr6 (68-166)||(2455298-2455397)
chr6 (98-203)||(2735068-2735177)
chr6 (106-172)||(9912161-9912228)
chr6 (67-172)||(13907618-13907722)
chr6 (66-139)||(26559169-26559244)
chr6 (55-129)||(30641821-30641896)
chr6 (55-172)||(430296-430414)
chr6 (62-135)||(6538584-6538658)
chr6 (55-85)||(7351590-7351620)
chr6 (72-157)||(9559358-9559444)
chr6 (67-136)||(30926588-30926658)
chr6 (62-138)||(21405080-21405157)
chr6 (119-203)||(31624089-31624175)
chr6 (97-201)||(33887831-33887938)
chr6 (61-93)||(2455923-2455955)
chr6 (140-172)||(6536980-6537012)
[»] chr2 (46 HSPs)
chr2 (63-176)||(2142683-2142797)
chr2 (89-202)||(40682348-40682464)
chr2 (67-203)||(29628673-29628814)
chr2 (67-172)||(750703-750809)
chr2 (89-176)||(36534797-36534885)
chr2 (62-145)||(42419853-42419937)
chr2 (66-148)||(449904-449987)
chr2 (106-172)||(28677630-28677696)
chr2 (62-135)||(27317449-27317523)
chr2 (97-196)||(8017440-8017542)
chr2 (61-162)||(5902476-5902576)
chr2 (62-172)||(7928224-7928336)
chr2 (55-119)||(39073621-39073685)
chr2 (100-172)||(40279440-40279512)
chr2 (62-172)||(4606958-4607069)
chr2 (71-166)||(5365514-5365608)
chr2 (62-136)||(23974419-23974494)
chr2 (62-136)||(30331820-30331895)
chr2 (67-136)||(42659142-42659212)
chr2 (98-166)||(16451157-16451226)
chr2 (62-200)||(26143568-26143708)
chr2 (123-203)||(29316764-29316846)
chr2 (70-196)||(3611232-3611362)
chr2 (97-172)||(12313135-12313210)
chr2 (55-145)||(2416373-2416464)
chr2 (55-94)||(6561449-6561488)
chr2 (110-199)||(26626876-26626969)
chr2 (214-265)||(41241206-41241257)
chr2 (62-168)||(41812018-41812125)
chr2 (62-135)||(10619146-10619220)
chr2 (97-173)||(787364-787440)
chr2 (119-172)||(1647269-1647321)
chr2 (141-209)||(3235390-3235461)
chr2 (70-166)||(19608567-19608664)
chr2 (119-172)||(35379001-35379053)
chr2 (119-172)||(40279300-40279353)
chr2 (119-172)||(40279370-40279423)
chr2 (119-172)||(41817201-41817253)
chr2 (119-172)||(43065435-43065487)
chr2 (97-136)||(1801736-1801776)
chr2 (89-172)||(7035520-7035604)
chr2 (119-171)||(33256774-33256825)
chr2 (57-93)||(35809980-35810016)
chr2 (97-172)||(40158751-40158826)
chr2 (140-172)||(42420030-42420062)
chr2 (121-169)||(44438826-44438873)
[»] scaffold0057 (1 HSPs)
scaffold0057 (68-145)||(24681-24759)
[»] scaffold0528 (1 HSPs)
scaffold0528 (72-148)||(918-995)
[»] scaffold0110 (1 HSPs)
scaffold0110 (55-116)||(33832-33893)


Alignment Details
Target: chr1 (Bit Score: 464; Significance: 0; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 464; E-Value: 0
Query Start/End: Original strand, 5 - 503
Target Start/End: Complemental strand, 6102354 - 6101853
Alignment:
Q  5 gacacaacctacagcatcacaagagtaaaccttgcattcatttatgaaattgtttaaattgacttatttgagtttatctaccggcataaattttgtgaga 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6102354 gacacaacctacagcatcacaagagtaaaccttgcattcatttatgaaattgtttaaattgacttatttgagtttatctaccggcataaattttgtgaga 6102255  T
Q  105 ttgtttgggagaactatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaattc---cagatagcttgtgaaaacagcttat 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||| ||||||||||||||    
T  6102254 ttgtttgggagaactatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaattctcccagatagcttatgaaaacagcttat 6102155  T
Q  202 agtgtataagtgtatacaaaaacaatctaacttcactttttctttttctatcgaaatagcttatccgtatgcgcttgtgctataagctgcaaatacgtgt 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  6102154 agtgtataagtgtatacaaaaacaatctaacttcactttttctttttctatcgaaatagcttatccgtaagcgcttgtgctataagctgcaaataagtgt 6102055  T
Q  302 ttttccaaaacaaggtccaactagattatgaaatgcattactattaaattaaaaactacaacatctaaaactcaaactaggtctaattcaagcttaataa 401  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6102054 ttttccaaaacaaggtccaactagattatgaaatgcattactcttaaattaaaaactacaacatctaaaactcaaactaggtctaattcaagcttaataa 6101955  T
Q  402 aatcgattattacaactgagaaagaatcaagtaccgttttattcttcgaacgccgcggtttgcaagagaatataaacctcagaagattcggaacagcctg 501  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    
T  6101954 aatcgattattacaactgagaaagaatcaagtaccgttttattcttcgaacgccgcggtttgcaagagaagataaacctcagaagattcggaacagcgtg 6101855  T
Q  502 ag 503  Q
    ||    
T  6101854 ag 6101853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 55 - 136
Target Start/End: Complemental strand, 2295247 - 2295165
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    ||||| ||||| |||||||||| |||||||| ||||||| |||||||||| ||||||||||||| ||||||||||||||||||    
T  2295247 tgtttgaattggcttatttgagcttatctactggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatga 2295165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 67 - 162
Target Start/End: Complemental strand, 38001734 - 38001639
Alignment:
Q  67 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagctt 162  Q
    |||||||||||||||| || | ||||| |||||||||| ||||||||||||| ||||||||||||||||||   ||||||||| |||||||||||||    
T  38001734 cttatttgagtttatcaactgacataagttttgtgagactgtttgggagaacttatgaaaacagcttatga-cctgttcataagttgttttcagctt 38001639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 62 - 172
Target Start/End: Original strand, 47498766 - 47498876
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    ||||||||||| ||| |||| ||  ||| ||| |||| || ||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||| |||    
T  47498766 attgacttattcgagcttatgtagtggc-taagttttttgtgattgtttgggagaacttatgaaaatagcttatgatattgttcataagttgtttttagc 47498864  T
Q  161 ttatttccataa 172  Q
    |||||| |||||    
T  47498865 ttattttcataa 47498876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 49938891 - 49938816
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    |||||||||||||||||||| |   ||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  49938891 attgacttatttgagtttatatcgtggcataagttttgtgagattgtttgggagaacttatgaaaacagcttatga 49938816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 62 - 148
Target Start/End: Complemental strand, 1432659 - 1432572
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataa 148  Q
    |||| |||||||||| ||||| |||| |||||||||||||||| ||||||| ||||| |||||||| ||| ||||| |||||||||||    
T  1432659 attggcttatttgagcttatccaccgacataaattttgtgagactgtttggaagaacttatgaaaatagcgtatgacattgttcataa 1432572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 172
Target Start/End: Complemental strand, 6292636 - 6292526
Alignment:
Q  62 attgacttatttgagtttatctaccggcataa--attttgtgagattgtttgggagaactatgaaaacagcttatgatattgttcataaattgttttcag 159  Q
    ||||||||||||||| |||||||| | |||||  | ||| |||||||||||||||||| | | |||||||||||||| | |||||||||  |||||||||    
T  6292636 attgacttatttgagcttatctactgacataagcacttt-tgagattgtttgggagaatttttaaaacagcttatgaca-tgttcataagctgttttcag 6292539  T
Q  160 cttatttccataa 172  Q
    ||||||| |||||    
T  6292538 cttattttcataa 6292526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 172
Target Start/End: Original strand, 36514606 - 36514713
Alignment:
Q  66 acttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttat 164  Q
    |||||||||||||||||||| | ||||| |||| ||||| |||| |||||||| |||||||| | ||||||| |||||| | ||  |||||||||||| |    
T  36514606 acttatttgagtttatctactgccataagttttttgagactgttagggagaacttatgaaaataacttatgacattgtttagaagctgttttcagctttt 36514705  T
Q  165 ttccataa 172  Q
    || |||||    
T  36514706 tttcataa 36514713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 171
Target Start/End: Complemental strand, 11941406 - 11941296
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    ||||||||||||||  || |||||  |||||  || ||||||| ||||||||||| || ||||||| ||||||| | |||||||||||  ||||||||||    
T  11941406 attgacttatttgaacttttctactagcatatgttatgtgagactgtttgggagagcttatgaaaatagcttataacattgttcataagctgttttcagc 11941307  T
Q  161 ttatttccata 171  Q
    |||||| ||||    
T  11941306 ttattttcata 11941296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 176
Target Start/End: Original strand, 4768763 - 4768870
Alignment:
Q  70 atttgagtttatctaccggcataaatt-ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttc 167  Q
    ||||||||||||| || ||||||||   ||||||||  |||||||| |||| | |||||||||||| || || || ||||| ||||||||||||||||||    
T  4768763 atttgagtttatcaactggcataaacacttgtgagacagtttgggaaaacttacgaaaacagcttacgacat-gtccataacttgttttcagcttatttc 4768861  T
Q  168 cataaattc 176  Q
    |||||||||    
T  4768862 cataaattc 4768870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 33204313 - 33204377
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact 119  Q
    |||||| || |||||||||||| |||||||| | ||||| |||||||||| ||||||||||||||    
T  33204313 tgtttagatcgacttatttgagcttatctactgacataagttttgtgagactgtttgggagaact 33204377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 35669057 - 35669002
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaatt 175  Q
    ||||||| ||||||||||||| || ||||||||||||||| ||||||||||||||||    
T  35669057 tatgaaagcagcttatgatat-gtccataaattgttttcaacttatttccataaatt 35669002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 199
Target Start/End: Complemental strand, 45975806 - 45975693
Alignment:
Q  90 ataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaatt---ccagatagct 185  Q
    ||||||||| ||||| ||||  ||||||| |||||||||||  ||| | ||| |||||||  |||||||||||||||| ||||||||   | ||||||||    
T  45975806 ataaattttctgagactgttcaggagaacatatgaaaacagtgtataacattattcataagctgttttcagcttattttcataaattctccaagatagct 45975707  T
Q  186 tgtgaaaacagctt 199  Q
    | ||||||||||||    
T  45975706 tatgaaaacagctt 45975693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 51929501 - 51929576
Alignment:
Q  98 tgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||||||||||||||| | ||||||||||||||||| | | |||||||  | |||||| |||||||||||||    
T  51929501 tgtgagattgtttgggagaattcatgaaaacagcttatgacaattttcataagcttttttcaacttatttccataa 51929576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 27820152 - 27820237
Alignment:
Q  91 taaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaattc 176  Q
    |||||||||||||| ||||| |||||| | ||||||| ||||||| | |||||||||||  | |||||||||||||| |||||||||    
T  27820152 taaattttgtgagactgttttggagaatttatgaaaa-agcttattacattgttcataagctattttcagcttattttcataaattc 27820237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 172
Target Start/End: Original strand, 38115998 - 38116115
Alignment:
Q  57 tttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggag--aactatgaaaacagcttatgatattgttcataaattgtt 154  Q
    |||| ||||||||||||||| |||||||| | | ||| ||||||||||  |||| ||||  || || ||||| ||||||||| ||||||| ||| |||||    
T  38115998 tttagattgacttatttgagcttatctactgacgtaagttttgtgagacggttttggagaaaaataagaaaatagcttatgacattgttcctaagttgtt 38116097  T
Q  155 ttcagcttatttccataa 172  Q
    | ||||||| || |||||    
T  38116098 tccagcttactttcataa 38116115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 38480526 - 38480612
Alignment:
Q  88 gcataaattttgtgagattgtttgggagaact-atg-aaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||| |||||||||| | |||||||||||| ||| |||| ||||||||| |||| ||||||| |||||| ||||||||| |||||    
T  38480526 gcataagttttgtgagactatttgggagaactaatgaaaaatagcttatgacattgctcataaactgtttttagcttattttcataa 38480612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 10199381 - 10199445
Alignment:
Q  108 tttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||||||| ||||||| ||||||||| || |||||||| ||||||||||||||||| |||||    
T  10199381 tttgggagaactcatgaaaatagcttatgacat-gttcataagttgttttcagcttattttcataa 10199445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 14576580 - 14576685
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||| |||||||||| |||||||| ||| |||||||||||  | ||||||||| ||| | |||||||||||||||| | | |||| ||  | ||||||||    
T  14576580 attggcttatttgagcttatctactggcttaaattttgtggcactgtttgggacaacttgtgaaaacagcttatgacaattttcaaaagcttttttcagc 14576679  T
Q  161 ttattt 166  Q
    ||||||    
T  14576680 ttattt 14576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 148
Target Start/End: Complemental strand, 15943110 - 15943017
Alignment:
Q  56 gtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataa 148  Q
    |||| |||| |||||||||||||||| ||  |||||||| ||||||||| ||||| ||||||| |||  ||||| || |||| |||||||||||    
T  15943110 gtttgaatttacttatttgagtttatatattggcataaactttgtgagactgtttaggagaacatatagaaacaactgatgacattgttcataa 15943017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 38503449 - 38503502
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||| ||||||| ||||| ||||||||||| ||||||||||||||||| |||||    
T  38503449 tatggaaacagcctatgacattgttcataagttgttttcagcttattttcataa 38503502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 46504143 - 46504192
Alignment:
Q  61 aattgacttatttgagtttatctaccggcataaat-tttgtgagattgtt 109  Q
    ||||||||||||||||||||||||||||||||| | ||||||||| ||||    
T  46504143 aattgacttatttgagtttatctaccggcataagtatttgtgagactgtt 46504192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 14629971 - 14630037
Alignment:
Q  140 tgttcataaattgttttcagcttatttccataaa---ttccagatagcttgtgaaaacagcttatag 203  Q
    ||||||||| ||||||||||||||||||||||||   | | ||||||||| |||||| |||||||||    
T  14629971 tgttcataagttgttttcagcttatttccataaagtctccaagatagcttatgaaaatagcttatag 14630037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 38247465 - 38247397
Alignment:
Q  68 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatg 135  Q
    ||||||||  |||||||| ||||||| |||||||  | ||||||||||||| |||||||||||||||||    
T  38247465 ttatttgaacttatctactggcataagttttgtgtcactgtttgggagaacttatgaaaacagcttatg 38247397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 50644181 - 50644253
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagctta 133  Q
    ||||||||||||||| ||||||||   ||||  |||||||||| ||||||||||||| |||||||||| ||||    
T  50644181 attgacttatttgagcttatctactaacatatgttttgtgagactgtttgggagaacttatgaaaacaactta 50644253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 172
Target Start/End: Original strand, 3233941 - 3234052
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    ||||||||||||||| |||||||  | | ||| |||||||||| |||| |||||||| |||||||||| ||||| | | | ||||||| || |||||  |    
T  3233941 attgacttatttgagcttatctagtgccgtaagttttgtgagactgttagggagaacttatgaaaacaacttataacagttttcataagtttttttctac 3234040  T
Q  161 ttatttccataa 172  Q
    |||||| |||||    
T  3234041 ttattttcataa 3234052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 172
Target Start/End: Original strand, 3887558 - 3887669
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    ||||||||||||||| ||  |||  || |||| |||||| ||  ||||||| |||||| ||||||||| ||||||| |||||||||||  |||||| | |    
T  3887558 attgacttatttgagctttactattggtataagttttgtaaggctgtttggaagaacttatgaaaacatcttatgacattgttcataagctgtttttaac 3887657  T
Q  161 ttatttccataa 172  Q
    |||||| |||||    
T  3887658 ttattttcataa 3887669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 5721069 - 5720994
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    |||| |||||||||| ||| ||||  |||||| ||||||  || ||||||||||||| ||||||||||||||||||    
T  5721069 attggcttatttgagcttaactacttgcataagttttgttggactgtttgggagaacttatgaaaacagcttatga 5720994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 132
Target Start/End: Original strand, 34795392 - 34795443
Alignment:
Q  82 ctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagctt 132  Q
    |||| ||||||||||||| |||| ||||||||||||| ||||||||||||||    
T  34795392 ctactggcataaattttgcgagactgtttgggagaacttatgaaaacagctt 34795443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 63 - 172
Target Start/End: Original strand, 37593611 - 37593721
Alignment:
Q  63 ttgacttatttgagtttatctaccggcataaatt-ttgtgagattgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||||||||||||| |||| ||| ||||||||   |||| ||| ||||||||| ||||| |||| ||| ||||||| || ||||||||  ||||||||||    
T  37593611 ttgacttatttgagcttatatactggcataaacacttgttagactgtttgggaaaactaatgaacacaacttatgacat-gttcataagctgttttcagc 37593709  T
Q  161 ttatttccataa 172  Q
    |||||| |||||    
T  37593710 ttattttcataa 37593721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 37617391 - 37617462
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagctt 132  Q
    |||||||||||||||||||||||  | | ||| |||||||||| |||||| |||||  ||||||||||||||    
T  37617391 attgacttatttgagtttatctattgccgtaagttttgtgagactgtttgcgagaatttatgaaaacagctt 37617462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 170
Target Start/End: Complemental strand, 37811937 - 37811887
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccat 170  Q
    |||||||||||||||||| || ||||||||| |||||||| |||||||||||    
T  37811937 tatgaaaacagcttatgacat-gttcataaactgttttcaacttatttccat 37811887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 38018306 - 38018405
Alignment:
Q  78 ttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaattc 176  Q
    |||||||| ||||||| |||||||||| || |||||| |||| |||||| ||| ||| || ||||||||| |  | |||||||||||||| ||| |||||    
T  38018306 ttatctactggcataagttttgtgagactggttgggaaaacttatgaaagcagattaggacattgttcattaggtattttcagcttattttcatgaattc 38018405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 27146181 - 27146283
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    ||||||| ||||||| |||||||  ||||||| |||||||||| |  |||| |||||| | | ||||| ||||||| |||||||||||  |||||||| |    
T  27146181 attgactgatttgagcttatctattggcataagttttgtgagacttgttggaagaacttaaggaaacaacttatgacattgttcataagctgttttcaac 27146280  T
Q  161 tta 163  Q
    |||    
T  27146281 tta 27146283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 142 - 203
Target Start/End: Complemental strand, 34290299 - 34290235
Alignment:
Q  142 ttcataaattgttttcagcttatttccataa---attccagatagcttgtgaaaacagcttatag 203  Q
    ||||||| ||||||||||||||||| |||||    ||| ||||||||| ||||||||||||||||    
T  34290299 ttcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatag 34290235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 35925775 - 35925722
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaa 173  Q
    |||||||||||||||||| || ||||||||  |||||||| ||||||||||||||    
T  35925775 tatgaaaacagcttatgacat-gttcataagctgttttcaacttatttccataaa 35925722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 162
Target Start/End: Original strand, 38170652 - 38170717
Alignment:
Q  97 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagctt 162  Q
    |||||||| || |||||||| || ||||||||||||||||| || |||||||| |||||||||||||    
T  38170652 ttgtgagactgcttgggagagcttatgaaaacagcttatgacat-gttcataagttgttttcagctt 38170717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 128
Target Start/End: Original strand, 39658444 - 39658502
Alignment:
Q  71 tttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaaca 128  Q
    |||||| ||||| |||| ||||| ||||||||||||| ||||||||||| |||||||||    
T  39658444 tttgagcttatccaccgacataagttttgtgagattgattgggagaactcatgaaaaca 39658502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 145
Target Start/End: Original strand, 39976138 - 39976220
Alignment:
Q  64 tgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttca 145  Q
    ||||||||||||| |||||||| | ||||| |||||||| | |||||| |||||| |||||||| |  |||||| ||||||||    
T  39976138 tgacttatttgagattatctactgacataagttttgtgaaactgtttgagagaacttatgaaaataatttatgacattgttca 39976220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 27145688 - 27145772
Alignment:
Q  88 gcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||| |||||||||| | ||||| |||||| | ||||||  ||||||| ||||||||||| || |||||||||||||| |||||    
T  27145688 gcataagttttgtgagactttttggaagaacttaagaaaacgacttatgacattgttcataagtt-ttttcagcttattttcataa 27145772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 31118128 - 31118076
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||||| ||||||| || |||||| | |||||||||||||||||||||||    
T  31118128 tatgaaaacatcttatgacat-gttcatcagttgttttcagcttatttccataa 31118076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 43990395 - 43990326
Alignment:
Q  68 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    ||||||||||| |||||| |  ||||||||||||||  | ||||||||||| | ||||||||||||||||    
T  43990395 ttatttgagttcatctactgatataaattttgtgaggctatttgggagaacgtttgaaaacagcttatga 43990326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 94
Target Start/End: Complemental strand, 2522740 - 2522708
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaa 94  Q
    |||||||||||||||||||||||| ||||||||    
T  2522740 attgacttatttgagtttatctactggcataaa 2522708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 4549947 - 4549888
Alignment:
Q  106 tgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgttttcagcttatt 165  Q
    ||||||||||||||  ||||||||| |||||| || |||||||| ||||||||||||||||    
T  4549947 tgtttgggagaacttctgaaaacagattatgacat-gttcataagttgttttcagcttatt 4549888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 94
Target Start/End: Original strand, 30259412 - 30259444
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaa 94  Q
    ||||||||||||||||||| |||||||||||||    
T  30259412 attgacttatttgagtttacctaccggcataaa 30259444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 30815643 - 30815690
Alignment:
Q  124 aaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    ||||||||||||| || ||||||||| |||||||||||||||| |||||    
T  30815643 aaacagcttatgacat-gttcataaaatgttttcagcttattttcataa 30815690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 31517702 - 31517777
Alignment:
Q  97 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||| |||||||||||||| || |||||| || |||| || ||||||||  |||||||||||||||| |||||    
T  31517702 ttgtgagactgtttgggagaacttatcaaaacaactcatgacat-gttcataagctgttttcagcttattttcataa 31517777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 32859951 - 32859983
Alignment:
Q  140 tgttcataaattgttttcagcttatttccataa 172  Q
    ||||||||||||||||||||||| |||||||||    
T  32859951 tgttcataaattgttttcagcttgtttccataa 32859983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 172
Target Start/End: Original strand, 44815297 - 44815340
Alignment:
Q  128 agcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||    
T  44815297 agcttatgatat-gtgtataaattgttttcagcttatttccataa 44815340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 51695456 - 51695536
Alignment:
Q  97 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaattc 176  Q
    |||||||| ||||||| |||||| ||  ||||| ||||| | |||||||||||  | |||||||||||||| |||||||||    
T  51695456 ttgtgagactgtttggaagaacttatataaacaacttatcacattgttcataagctattttcagcttattttcataaattc 51695536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 4e-27; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 62 - 202
Target Start/End: Complemental strand, 21367811 - 21367667
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||| |||||||||| ||||||||| |||||| ||||||| || |||||||||||||| ||||||||||||||||| |||||||| ||  ||||||||||    
T  21367811 attggcttatttgagattatctaccagcataagttttgtgggactgtttgggagaacttatgaaaacagcttatgacattgttcacaagctgttttcagc 21367712  T
Q  161 ttatttccataaatt---ccagatagcttgtgaaaacagcttata 202  Q
    |||||| ||||| ||   | ||||||||| |||||||| ||||||    
T  21367711 ttattttcataagttctccaagatagcttatgaaaacaacttata 21367667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 24085264 - 24085369
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||| |||||||||| |||||||||||||||| |||||||||| || || ||||||| ||||||||||||||||| || ||||||||   ||||||||||    
T  24085264 attggcttatttgagcttatctaccggcataagttttgtgagactggtttggagaacttatgaaaacagcttatggtactgttcatacgctgttttcagc 24085363  T
Q  161 ttattt 166  Q
    ||||||    
T  24085364 ttattt 24085369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 62 - 176
Target Start/End: Original strand, 31365235 - 31365350
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||| ||||||||||||||||||  ||||||| |||||||| | ||||||||||||| |||||| ||||||||||| | | |||||||||  |||||| |    
T  31365235 attggcttatttgagtttatctattggcataatttttgtgacactgtttgggagaacttatgaatacagcttatgacaattttcataaatctttttcaac 31365334  T
Q  161 ttatttccataaattc 176  Q
    | |||| |||||||||    
T  31365335 tcattttcataaattc 31365350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 63 - 163
Target Start/End: Original strand, 402469 - 402570
Alignment:
Q  63 ttgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagct 161  Q
    ||||| |||||||||||||| ||   ||||| |||||  ||| ||||||||||||| |||||||||||||||||| |||||||||||  |||||||||||    
T  402469 ttgacctatttgagtttatcaactaacataagttttgcaagactgtttgggagaacgtatgaaaacagcttatgacattgttcataagctgttttcagct 402568  T
Q  162 ta 163  Q
    ||    
T  402569 ta 402570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 61 - 202
Target Start/End: Original strand, 39602136 - 39602280
Alignment:
Q  61 aattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcag 159  Q
    ||||| |||||||||| ||| |||| ||||| | |||||||||  | ||||| ||| || ||||| ||||||||||| || ||||||||||||||||||     
T  39602136 aattggcttatttgagcttagctactggcatcagttttgtgaggctatttggaagagcttatgaagacagcttatgacat-gttcataaattgttttcaa 39602234  T
Q  160 cttatttccataaattc---cagatagcttgtgaaaacagcttata 202  Q
    ||||||| ||||| |||    ||||||||| |||||||||||||||    
T  39602235 cttattttcataagttctcaaagatagcttatgaaaacagcttata 39602280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 174
Target Start/End: Original strand, 31365114 - 31365227
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||| |||||||||| |||||||  ||||||| |||||||||| ||||||||||||| ||||||| |||||||||| | | |||||||  | |||||| |    
T  31365114 attggcttatttgagcttatctattggcataagttttgtgagactgtttgggagaacttatgaaagcagcttatgacaattttcataagcttttttcaac 31365213  T
Q  161 ttatttccataaat 174  Q
    | |||| |||||||    
T  31365214 tcattttcataaat 31365227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 67 - 167
Target Start/End: Original strand, 46778122 - 46778223
Alignment:
Q  67 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttatt 165  Q
    |||||||||| |||| ||  |||||||||||||||| |  |||||||||||| |||||||||| ||||||| ||| ||||||| || | |||||||||||    
T  46778122 cttatttgagcttatttagtggcataaattttgtgaaaccgtttgggagaacttatgaaaacaacttatgacatttttcataagttttgttcagcttatt 46778221  T
Q  166 tc 167  Q
    ||    
T  46778222 tc 46778223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 203
Target Start/End: Original strand, 46886624 - 46886763
Alignment:
Q  68 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttattt 166  Q
    ||||||||| |||||| | ||||||||||||| |||| |||||||| || || ||||||||||||||||  ||||||| ||| || | ||||| ||||||    
T  46886624 ttatttgagcttatctgctggcataaattttgagagactgtttgggtgagctgatgaaaacagcttatggcattgttcgtaagttatgttcaggttattt 46886723  T
Q  167 ccataaatt---ccagatagcttgtgaaaacagcttatag 203  Q
     || || ||   | ||||||||| ||||||||||||||||    
T  46886724 tcaaaagttctccaagatagcttatgaaaacagcttatag 46886763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 166
Target Start/End: Complemental strand, 26878351 - 26878239
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgt 153  Q
    ||||| ||||| |||||| ||| |||||||| | ||||| ||  |||| | |||||| |||||||  |||||| ||||||||| |||||||||||| |||    
T  26878351 tgtttgaattggcttattcgagcttatctactgacataagttgcgtgaaactgtttgagagaacttgtgaaaatagcttatgacattgttcataaactgt 26878252  T
Q  154 tttcagcttattt 166  Q
    |||||||||||||    
T  26878251 tttcagcttattt 26878239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 65 - 172
Target Start/End: Original strand, 34610735 - 34610843
Alignment:
Q  65 gacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagctta 163  Q
    |||||||||||| |||||||| | ||||| ||||||   | | |||||||||||| |||||||| |||||||| ||||||||||| | |||||||||| |    
T  34610735 gacttatttgagcttatctactgacataagttttgtacaactatttgggagaacttatgaaaactgcttatgacattgttcataagtggttttcagctga 34610834  T
Q  164 tttccataa 172  Q
    ||| |||||    
T  34610835 ttttcataa 34610843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 30444029 - 30443926
Alignment:
Q  70 atttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttatttcc 168  Q
    ||||||| |||||||| ||||||||||| |||||| ||||||| ||| | |||||||||||||||||| | | |||| ||  | |||||||||||||| |    
T  30444029 atttgagcttatctactggcataaatttggtgagactgtttggtagagcttatgaaaacagcttatgacaattttcacaagcttttttcagcttattttc 30443930  T
Q  169 ataa 172  Q
    ||||    
T  30443929 ataa 30443926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 203
Target Start/End: Original strand, 25447171 - 25447315
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||||||||||||||||||||||| | ||||| |||||||||| ||||||  ||||| || | || ||| |||||  |||||||| ||  ||||||||||    
T  25447171 attgacttatttgagtttatctactgacataagttttgtgagactgtttgcaagaacatacggaagcagtttatgccattgttcacaagctgttttcagc 25447270  T
Q  161 ttatttccata--aattccagatagcttgtgaaaacagcttatag 203  Q
    || ||  ||||  || || ||||||||| ||||||||| ||||||    
T  25447271 tttttctcataagaaatcaagatagcttatgaaaacagtttatag 25447315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 20257681 - 20257605
Alignment:
Q  62 attgacttatttgagttt-atctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    |||| ||||||||||||| |||||| | |||||||||||||||| ||||||||||||| ||||||| ||||| ||||    
T  20257681 attggcttatttgagttttatctacagccataaattttgtgagactgtttgggagaacttatgaaagcagctaatga 20257605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 3776317 - 3776392
Alignment:
Q  63 ttgacttatttgagtttatctaccggcataaat-tttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    ||||||| ||||||||||||||| ||||||| |  |||||||| |||||| |||||| ||||||||||||||||||    
T  3776317 ttgacttgtttgagtttatctactggcataagtaattgtgagaatgtttgagagaacttatgaaaacagcttatga 3776392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 33046717 - 33046829
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaattttgt---gagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaat 150  Q
    ||||| ||||| ||||||| ||||||||||| ||||||| ||||||   |||| |||||||||| || || |||||||  || ||| |||| |||||| |    
T  33046717 tgtttgaattggcttattttagtttatctactggcataagttttgttgcgagactgtttgggaggacttacgaaaacaatttctgacattggtcataagt 33046816  T
Q  151 tgttttcagctta 163  Q
    |||||||||||||    
T  33046817 tgttttcagctta 33046829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 22892 - 22969
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatgata 138  Q
    |||| |||||||||  || ||||| ||||||| |||||||||||||||| ||||||  ||||||||||||||| ||||    
T  22892 attggcttatttgaacttgtctactggcataagttttgtgagattgtttaggagaagttatgaaaacagcttacgata 22969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 171
Target Start/End: Complemental strand, 26911735 - 26911619
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaatttt------gtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgtt 154  Q
    |||||||||||||||||||||||| | ||||| ||||      ||||||  |||||||| ||  |||||||||||||||||| | | ||||||| || ||    
T  26911735 attgacttatttgagtttatctactgacataagtttttgttttgtgagaccgtttgggataatatatgaaaacagcttatgacaattttcataagttttt 26911636  T
Q  155 ttcagcttatttccata 171  Q
    |||| ||||||||||||    
T  26911635 ttcaacttatttccata 26911619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 143
Target Start/End: Original strand, 26990151 - 26990232
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaactatgaaaacagcttatgatattgtt 143  Q
    ||||||||||||||| |||||||| | ||||   |||| || |||||||||||||||||  |||||||| ||||||| ||||    
T  26990151 attgacttatttgagcttatctactgacataggctttgcgatattgtttgggagaactaataaaacagcatatgatactgtt 26990232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 34637943 - 34637984
Alignment:
Q  94 attttgtgagattgtttgggagaac-tatgaaaacagcttat 134  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  34637943 attttgtgagattgtttgggagaacttatgaaaacagcttat 34637984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 166
Target Start/End: Complemental strand, 46031134 - 46031029
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||| ||||||||||||||||||  |  |||| |||| ||||| |||||  ||||||| | ||||||||| ||||| ||| |||||||  ||||||||||    
T  46031134 attggcttatttgagtttatctattgttataagttttatgagactgtttcagagaacttacgaaaacagcctatgacattattcataagctgttttcagc 46031035  T
Q  161 ttattt 166  Q
    ||||||    
T  46031034 ttattt 46031029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 584190 - 584118
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagctta 133  Q
    ||||||||||||||| ||||||||  |||||| || ||||||| ||||| ||||||  |||||||||||||||    
T  584190 attgacttatttgagcttatctactagcataagttctgtgagactgttttggagaatttatgaaaacagctta 584118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 22203566 - 22203499
Alignment:
Q  69 tatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    |||| ||| |||||||||| ||| |||||||||||| ||||| ||||||| ||||||||||||||||||    
T  22203566 tattcgagcttatctaccgacattaattttgtgagactgttt-ggagaacttatgaaaacagcttatga 22203499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 148
Target Start/End: Complemental strand, 5436216 - 5436129
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataa 148  Q
    |||| |||||||||||||||| || | ||||| |||||||| | ||||| | ||||| | |||||||| ||||||| |||||||||||    
T  5436216 attggcttatttgagtttatcaactgtcataagttttgtgacactgttttgaagaacttctgaaaacaacttatgacattgttcataa 5436129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 172
Target Start/End: Complemental strand, 20880620 - 20880509
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||| |||||||||| ||||||||  |||||| |||  | ||| | ||||||||||| |||||||||||||||||| | | |||||||  | |||| |||    
T  20880620 attggcttatttgagcttatctacttgcataagtttccttagactatttgggagaacctatgaaaacagcttatgacaattttcataagcttttttgagc 20880521  T
Q  161 ttatttccataa 172  Q
    |||||| |||||    
T  20880520 ttattttcataa 20880509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 39980873 - 39980798
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatga 136  Q
    |||| ||| |||||| ||||||||  |||||| |||||||||| |||||  ||||||| |||||||||||||||||    
T  39980873 attggcttgtttgagcttatctactagcataagttttgtgagactgtttaagagaacttatgaaaacagcttatga 39980798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 50952440 - 50952366
Alignment:
Q  98 tgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    ||||||| |||| | |||||| || ||||||||||||||| || ||||||||| |||||| |||||||||||||||    
T  50952440 tgtgagactgttcgagagaacgtacgaaaacagcttatgacat-gttcataaactgttttaagcttatttccataa 50952366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 164
Target Start/End: Original strand, 9832674 - 9832784
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgt 153  Q
    |||||| ||||||||||||||| |||| ||  | ||||| |||||| | | ||||||||||||| | |||||||||||||||   || |||||||| | |    
T  9832674 tgtttagattgacttatttgagcttatttattgacataagttttgtcaaactgtttgggagaacttttgaaaacagcttatgccttttttcataaacttt 9832773  T
Q  154 tttcagcttat 164  Q
    ||||| |||||    
T  9832774 tttcaacttat 9832784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 176
Target Start/End: Complemental strand, 26878228 - 26878146
Alignment:
Q  95 ttttgtgagattgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaattc 176  Q
    |||||||||| |||||||||||| |  |||||| || | |||| |||||||||||| |||||||||| ||||| ||| |||||    
T  26878228 ttttgtgagactgtttgggagaatttgtgaaaatagttaatgacattgttcataaactgttttcagcatattttcattaattc 26878146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 166
Target Start/End: Original strand, 42747709 - 42747814
Alignment:
Q  63 ttgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagc-ttatgatattgttcataaattgttttcagc 160  Q
    |||||||||||||||||||||||   ||||| | |||||||| |||||  |||||| |||||||||| | |||||| |||||| ||||  |||||||  |    
T  42747709 ttgacttatttgagtttatctacttccataagtattgtgagactgtttttgagaacttatgaaaacaactttatgacattgtttataagctgttttctcc 42747808  T
Q  161 ttattt 166  Q
    ||||||    
T  42747809 ttattt 42747814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 23808027 - 23808102
Alignment:
Q  98 tgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaa 173  Q
    |||||||  |||||||| |||| |||||| |||||||||| || ||||| |||||||||||| ||||||| ||||||    
T  23808027 tgtgagacggtttgggaaaacttatgaaagcagcttatgacat-gttcacaaattgttttcatcttattttcataaa 23808102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 28779471 - 28779439
Alignment:
Q  54 ttgtttaaattgacttatttgagtttatctacc 86  Q
    |||||| ||||||||||||||||||||||||||    
T  28779471 ttgtttgaattgacttatttgagtttatctacc 28779439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 172
Target Start/End: Complemental strand, 32582881 - 32582777
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    ||||||||||||||||||||||||   ||||| ||||   ||| |||||||||||||| ||||||||||    ||| |||||||| ||  | |||||| |    
T  32582881 attgacttatttgagtttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag----tgacattgttcaaaagattttttcaac 32582789  T
Q  161 ttatttccataa 172  Q
    ||||||||||||    
T  32582788 ttatttccataa 32582777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 37273240 - 37273135
Alignment:
Q  99 gtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaatt---ccagatagcttgtgaaaac 194  Q
    |||||| ||||||||||| || ||| ||||| ||||||| || || ||||| ||||||||| ||||||||||||| ||   | ||||||||| |||||||    
T  37273240 gtgagactgtttgggagagcttatggaaacaacttatgacat-gtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaac 37273142  T
Q  195 agcttat 201  Q
    || ||||    
T  37273141 agtttat 37273135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 172
Target Start/End: Complemental strand, 43115164 - 43115089
Alignment:
Q  97 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||||||||||| |||  | ||| ||||| ||||||| || || ||||| |||||||||||||||||||||||    
T  43115164 ttgtgagattgtttggaagagtttatggaaacaacttatgacat-gtccataacttgttttcagcttatttccataa 43115089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 44014724 - 44014800
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaa-ttttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    |||| |||||||||||||||||||  |||||||   |||||||| |||||| || ||| ||||||||||||||||||    
T  44014724 attggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagcttatga 44014800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 45432944 - 45432976
Alignment:
Q  140 tgttcataaattgttttcagcttatttccataa 172  Q
    ||||||||| |||||||||||||||||||||||    
T  45432944 tgttcataagttgttttcagcttatttccataa 45432976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 172
Target Start/End: Complemental strand, 45555041 - 45555009
Alignment:
Q  140 tgttcataaattgttttcagcttatttccataa 172  Q
    |||||||||| ||||||||||||||||||||||    
T  45555041 tgttcataaaatgttttcagcttatttccataa 45555009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 62 - 200
Target Start/End: Complemental strand, 39594951 - 39594809
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    ||||||||||||||| |||||||||| ||||| |||||| ||||||||||||| ||| ||||||||||||| | |||| ||||  ||| |||||||||||    
T  39594951 attgacttatttgagcttatctaccgacataagttttgttagattgtttgggacaacttatgaaaacagctgaagataatgttattaagttgttttcagc 39594852  T
Q  161 ttatttccataaatt---ccagatagcttgtgaaaacagctta 200  Q
    |||||| ||||| ||   | ||||| ||| |||||||||||||    
T  39594851 ttattttcataagttcaacaagatatcttatgaaaacagctta 39594809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 55 - 203
Target Start/End: Complemental strand, 7985120 - 7984968
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgt 153  Q
    |||||| |||| || ||||||| |||||||| |||||||  ||||||||| | ||||||||| || | ||||||||||| |||  ||||||||||  |||    
T  7985120 tgtttagattggctaatttgagattatctactggcataagctttgtgagactatttgggagagcttaagaaaacagcttgtgacgttgttcataagctgt 7985021  T
Q  154 tttcagcttatttccataaatt---ccagatagcttgtgaaaacagcttatag 203  Q
    ||||||||||||| ||||||||   | ||||||||| |||||| |||||||||    
T  7985020 tttcagcttattttcataaattctccaagatagcttatgaaaaaagcttatag 7984968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 67 - 148
Target Start/End: Complemental strand, 10640092 - 10640010
Alignment:
Q  67 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataa 148  Q
    ||||||||||||||||||| | ||||| |||||||| ||||||||||||||| |||||||||||||||||| ||| |||||||    
T  10640092 cttatttgagtttatctactgacataagttttgtgatattgtttgggagaacttatgaaaacagcttatgacatttttcataa 10640010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 63 - 203
Target Start/End: Complemental strand, 12425716 - 12425570
Alignment:
Q  63 ttgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac---tatgaaaacagcttatgatattgttcataaattgttttcag 159  Q
    |||||||||||||| |||||||| | ||||| |||||||||| |||||||||||||   |||||||||| | ||  | |||||  |||| |||||||||     
T  12425716 ttgacttatttgagcttatctactgtcataagttttgtgagactgtttgggagaacttatatgaaaacaacctaaaacattgtcaataagttgttttcaa 12425617  T
Q  160 cttatttccataaatt---ccagatagcttgtgaaaacagcttatag 203  Q
    ||||||| ||||| ||   | ||||||||||||||||||||||||||    
T  12425616 cttattttcataagttctccaagatagcttgtgaaaacagcttatag 12425570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 41419463 - 41419357
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    ||||||||||||||| | |||||| | |||||||||||||||||||||||||| ||| | |||||||||||||||| ||||||||| |  | |||||||     
T  41419463 attgacttatttgagctaatctactgacataaattttgtgagattgtttgggataacttgtgaaaacagcttatgacattgttcatgagctattttcaga 41419364  T
Q  161 ttatttc 167  Q
    |||||||    
T  41419363 ttatttc 41419357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 62 - 203
Target Start/End: Complemental strand, 39105609 - 39105463
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgaga-ttgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcag 159  Q
    |||||||||||||||||||||||  || |||| |||| ||||| || |||||||||| | ||||||||||||||||| |||||||||||  | |||| ||    
T  39105609 attgacttatttgagtttatctaggggtataagttttatgagacttttttgggagaatttatgaaaacagcttatgacattgttcataagctatttttag 39105510  T
Q  160 cttatttccataaatt---ccagatagcttgtgaaaacagcttatag 203  Q
    ||||||| ||||| ||   | ||||||||| ||||||||| ||||||    
T  39105509 cttattttcataagttctccaagatagcttatgaaaacagattatag 39105463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 11064810 - 11064727
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttc 144  Q
    ||||| |||||||||||||||||||  ||||| ||||||||||||||||| |||||| |||||||| ||||||||| |||||||    
T  11064810 attgatttatttgagtttatctaccaacataagttttgtgagattgtttgagagaacttatgaaaatagcttatgacattgttc 11064727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 50 - 166
Target Start/End: Original strand, 1464934 - 1465051
Alignment:
Q  50 gaaattgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataa 148  Q
    |||| ||||| |||||||||||||||| ||| || |  |||||| || || |||| |||| ||||||||| ||||||||||||||||  |||| ||||||    
T  1464934 gaaactgtttgaattgacttatttgagcttagcttctagcataagttctgcgagactgttcgggagaacttatgaaaacagcttatggcattgctcataa 1465033  T
Q  149 attgttttcagcttattt 166  Q
     |||||||||||||||||    
T  1465034 gttgttttcagcttattt 1465051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 62 - 201
Target Start/End: Original strand, 9202674 - 9202817
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    ||||||||||||||| |||||| | ||||||| |||||| ||| | ||| ||| ||||| || ||||||||||||| |||||||||||  ||||| ||||    
T  9202674 attgacttatttgagcttatctcctggcataagttttgtaagactatttcggaaaactaatggaaacagcttatgacattgttcataagctgtttccagc 9202773  T
Q  161 ttatttccataa---attccagatagcttgtgaaaacagcttat 201  Q
    |||||| |||||    ||| ||||| ||| ||||||||||||||    
T  9202774 ttattttcataagttcttcaagataacttatgaaaacagcttat 9202817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 9107234 - 9107162
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagctta 133  Q
    |||||||||||||||||||||||  | ||||| |||||||||| |||||||||||||| ||||||||||||||    
T  9107234 attgacttatttgagtttatctagtgacataagttttgtgagaatgtttgggagaactcatgaaaacagctta 9107162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 41534582 - 41534479
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    ||||||||||||||| | |||||| | |||||||||||||||||||||||||| ||| | ||||||||||||||||    ||||||||  |||||||||     
T  41534582 attgacttatttgagctaatctactgacataaattttgtgagattgtttgggataacttgtgaaaacagcttatga---cgttcataagctgttttcaga 41534486  T
Q  161 ttatttc 167  Q
    |||||||    
T  41534485 ttatttc 41534479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 16937809 - 16937914
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||| |||||||||| ||||||||  |||||| |||||||||| ||||||| |||||| ||||||||||||||||| |   |||||||  | ||||||||    
T  16937809 attggcttatttgagcttatctactagcataagttttgtgagagtgtttggaagaacttatgaaaacagcttatgacaaatttcataagcttttttcagc 16937908  T
Q  161 ttattt 166  Q
    ||||||    
T  16937909 ttattt 16937914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 11700301 - 11700196
Alignment:
Q  67 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatt 165  Q
    |||||||||| ||||| || ||||||| |||||||||| |||||   |||||| ||| ||||| ||||||| ||||||||||||||| ||||| ||||||    
T  11700301 cttatttgagcttatccactggcataagttttgtgagactgtttcacagaacttatggaaacaacttatgacattgttcataaattg-tttcatcttatt 11700203  T
Q  166 tccataa 172  Q
    | |||||    
T  11700202 ttcataa 11700196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 119
Target Start/End: Original strand, 19460260 - 19460309
Alignment:
Q  70 atttgagtttatctaccggcataaattttgtgagattgtttgggagaact 119  Q
    |||||||||||||||| ||||||| ||| |||||||||||||||||||||    
T  19460260 atttgagtttatctactggcataagtttagtgagattgtttgggagaact 19460309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 499702 - 499769
Alignment:
Q  106 tgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaa 173  Q
    |||||||||||||| ||||||||||||||||| || ||| | || ||||||||||||||||||||||||    
T  499702 tgtttgggagaacttatgaaaacagcttatgacat-gttaacaagttgttttcagcttatttccataaa 499769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 166
Target Start/End: Complemental strand, 40426908 - 40426804
Alignment:
Q  63 ttgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagct 161  Q
    |||||||||||||| |||||||  | |||||||||||||||| |||||||| |  | |||||||||||||||||  ||| |||||||  | |||| ||||    
T  40426908 ttgacttatttgagcttatctaatgacataaattttgtgagactgtttgggggtgcttatgaaaacagcttatgccatttttcataagcttttttaagct 40426809  T
Q  162 tattt 166  Q
    |||||    
T  40426808 tattt 40426804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 119 - 166
Target Start/End: Complemental strand, 4625814 - 4625767
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgttttcagcttattt 166  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||||    
T  4625814 tatgaaaacagcttatgaaattgttcatacattgttttcaacttattt 4625767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 176
Target Start/End: Complemental strand, 6096691 - 6096576
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||||| |||||||  |||||||| ||||||| |||||||||| | || || |||||| | | ||||||||| ||| |||||||||||  |||| |||||    
T  6096691 attgacgtatttgaacttatctactggcataagttttgtgagacttttaggaagaacttacgtaaacagcttgtgacattgttcataagctgttctcagc 6096592  T
Q  161 ttatttccataaattc 176  Q
    | |||| |||||||||    
T  6096591 tcattttcataaattc 6096576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 42100450 - 42100344
Alignment:
Q  67 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttatt 165  Q
    |||||||||| |||||||  ||||||||||||||| || ||| || |||||| | |||||| ||||||||| || ||||| ||  |||||||| ||||||    
T  42100450 cttatttgagcttatctattggcataaattttgtgtgactgtgtgagagaacttgtgaaaatagcttatgacatagttcaaaaggtgttttcatcttatt 42100351  T
Q  166 tccataa 172  Q
    | |||||    
T  42100350 ttcataa 42100344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 156
Target Start/End: Original strand, 42583261 - 42583363
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgt 153  Q
    ||||| |||||||||| |||||  | || || | ||||||||||| |||  ||||||||||||||| ||||||||| |||| | ||||||||||| ||||    
T  42583261 tgtttgaattgacttacttgagcgtgtccactgacataaattttgcgaggctgtttgggagaactaatgaaaacagtttataacattgttcataagttgt 42583360  T
Q  154 ttt 156  Q
    |||    
T  42583361 ttt 42583363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 1899235 - 1899183
Alignment:
Q  123 aaaacagcttatgatattgttcataaattgttttcagcttatttccataaattc 176  Q
    |||||||||||||| || || ||||| |||||||||||||||||||||||||||    
T  1899235 aaaacagcttatgacat-gtgcataagttgttttcagcttatttccataaattc 1899183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 8334657 - 8334604
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||| ||||||||| ||  ||||||||||||||||||||||||| |||||    
T  8334657 tatgaaaatagcttatgacatatttcataaattgttttcagcttattttcataa 8334604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 172
Target Start/End: Original strand, 19460323 - 19460423
Alignment:
Q  72 ttgagtttatctaccggcataaattttgtgagattgtttgggagaactat-gaaaacagcttatgatattgttcataaattgttttcagcttatttccat 170  Q
    |||||| ||||||| ||||||| ||| |||||| ||||| |||||||| | | ||||| ||||||||||| |||||||  || ||||||||||||| |||    
T  19460323 ttgagtctatctactggcataagtttagtgagactgtttaggagaacttttggaaacaacttatgatatttttcataagctg-tttcagcttattttcat 19460421  T
Q  171 aa 172  Q
    ||    
T  19460422 aa 19460423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 166
Target Start/End: Original strand, 16457938 - 16458010
Alignment:
Q  95 ttttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttattt 166  Q
    |||||||||| ||||||||||||| |||||||||||||||||| | | |||||||  | ||||||| ||||||    
T  16457938 ttttgtgagactgtttgggagaacttatgaaaacagcttatgacagttttcataagctcttttcagtttattt 16458010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 17258845 - 17258920
Alignment:
Q  97 ttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||| ||| ||||||||||| |||||||| ||||||||| || ||||||||  |||||||||||||||| |||||    
T  17258845 ttgtgacattctttgggagaacctatgaaaatagcttatgacat-gttcataagctgttttcagcttattttcataa 17258920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 164
Target Start/End: Complemental strand, 42228156 - 42228080
Alignment:
Q  89 cataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttat 164  Q
    ||||| ||| |||||||||||||||||||| |||| |||||||||| || ||||||  ||| ||||||| |||||||    
T  42228156 cataagtttcgtgagattgtttgggagaacttatggaaacagcttaagacattgttagtaagttgtttttagcttat 42228080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 176
Target Start/End: Complemental strand, 7674791 - 7674677
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||| |||||||||| |||||||||  | ||| |||||||||| || |||| |||||| ||| ||||| ||||||| || ||| ||||  ||||||||||    
T  7674791 attggcttatttgagcttatctacctacttaagttttgtgagactgcttggaagaacttatggaaacaacttatgacat-gtttataaggtgttttcagc 7674693  T
Q  161 ttatttccataaattc 176  Q
    |||||| || ||||||    
T  7674692 ttattttcacaaattc 7674677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 7705924 - 7705999
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    |||||||||||||||  |||||||  |||||| ||||||||   | ||||||||||| ||||||||||||||||||    
T  7705924 attgacttatttgagcatatctactagcataagttttgtgacgctctttgggagaacttatgaaaacagcttatga 7705999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 7808611 - 7808544
Alignment:
Q  100 tgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttattt 166  Q
    ||||| ||||||||||| || ||||||| ||||||| | |||||||||||  ||||||||||||||||    
T  7808611 tgagactgtttgggagagcttatgaaaatagcttataacattgttcataagctgttttcagcttattt 7808544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 9106929 - 9106854
Alignment:
Q  98 tgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    ||||| ||||||||| |||||| ||||||||| ||||| || |  |||||||  ||||||||||||||||||||||    
T  9106929 tgtgacattgtttggaagaacttatgaaaacaacttataatgtatttcataagctgttttcagcttatttccataa 9106854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 148
Target Start/End: Original strand, 12433099 - 12433186
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatgatattgttcataa 148  Q
    |||| |||||||||  |||| ||| ||||||  |||||||||||||||||||||||  |||||||| |||||| || |||| ||||||    
T  12433099 attggcttatttgaacttatttactggcataggttttgtgagattgtttgggagaagttatgaaaatagcttacgacattgatcataa 12433186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 158
Target Start/End: Complemental strand, 39248216 - 39248146
Alignment:
Q  88 gcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttca 158  Q
    |||||| |||||||||| ||||||||||||| ||| ||||||||||||||  ||||||||||  ||||||||    
T  39248216 gcataagttttgtgagactgtttgggagaacttataaaaacagcttatga-cttgttcataagctgttttca 39248146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 2880532 - 2880585
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaa 173  Q
    |||| |||||||| ||||||| ||||||||  |||||||||||||||||||||||    
T  2880532 tatggaaacagctaatgatat-gttcataaggtgttttcagcttatttccataaa 2880585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 29925952 - 29925874
Alignment:
Q  95 ttttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    ||||||||||  ||||||||||||| ||||||||||||||||| | |||||||   || |||||| ||||||| |||||    
T  29925952 ttttgtgagaccgtttgggagaacttatgaaaacagcttatgacaatgttcatgtgtttttttcaacttattttcataa 29925874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 148
Target Start/End: Complemental strand, 31038418 - 31038341
Alignment:
Q  72 ttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataa 148  Q
    ||||| |||||||||||||||| |||||||| | ||||| ||| ||| ||| |||| ||||||||| ||| |||||||    
T  31038418 ttgagcttatctaccggcataagttttgtgatactgttttggacaacttataaaaatagcttatgacatttttcataa 31038341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 148
Target Start/End: Complemental strand, 31047642 - 31047565
Alignment:
Q  72 ttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataa 148  Q
    ||||| |||||||||||||||| |||||||| | ||||| ||| ||| ||| |||| ||||||||| ||| |||||||    
T  31047642 ttgagcttatctaccggcataagttttgtgatactgttttggacaacttataaaaatagcttatgacatttttcataa 31047565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 39983716 - 39983679
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgtttt 156  Q
    |||||||||| ||||||||||| |||||||||||||||    
T  39983716 tatgaaaacaacttatgatattcttcataaattgtttt 39983679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 41981645 - 41981715
Alignment:
Q  78 ttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaa 149  Q
    ||||||||  |||| | |||||||||| ||||||||||||| ||||||||||||  |||| ||||||||||||    
T  41981645 ttatctactagcattagttttgtgagactgtttgggagaacttatgaaaacagc--atgacattgttcataaa 41981715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 136
Target Start/End: Complemental strand, 3520722 - 3520646
Alignment:
Q  61 aattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    ||||| |||||||||| | ||||||  | |||| || ||||||| ||||||||||||| |||||||||| |||||||    
T  3520722 aattggcttatttgagctcatctactagtataagttgtgtgagactgtttgggagaacttatgaaaacatcttatga 3520646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 265
Target Start/End: Original strand, 7706057 - 7706101
Alignment:
Q  221 aaacaatctaacttcactttttctttttctatcgaaatagcttat 265  Q
    ||||||| ||||||||| ||||||||||||||  |||||||||||    
T  7706057 aaacaatttaacttcacattttctttttctataaaaatagcttat 7706101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 14182386 - 14182450
Alignment:
Q  140 tgttcataaattgttttcagcttatttccataaattc-ca-gatagcttgtgaaaacagcttata 202  Q
    ||||||||||||||||||| ||||||| ||||| ||| || |||| ||| |||||||||||||||    
T  14182386 tgttcataaattgttttcaacttattttcataagttctcaggataacttatgaaaacagcttata 14182450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 119
Target Start/End: Complemental strand, 15015982 - 15015930
Alignment:
Q  67 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact 119  Q
    |||||||||| |||||||| | |||||  ||||||||| ||||||||||||||    
T  15015982 cttatttgagcttatctactgacataagctttgtgagactgtttgggagaact 15015930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 172
Target Start/End: Original strand, 19138726 - 19138754
Alignment:
Q  144 cataaattgttttcagcttatttccataa 172  Q
    |||||||||||||||||||||||||||||    
T  19138726 cataaattgttttcagcttatttccataa 19138754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 35445775 - 35445843
Alignment:
Q  67 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttat 134  Q
    ||||||||||||||||||| | ||||| |||||||||| | ||||  ||||  ||||||||||||||||    
T  35445775 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 35445843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 37611177 - 37611252
Alignment:
Q  97 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    ||||||||||||||| |||| || ||||||||| ||| ||| || ||||||||  ||||||||| ||||||||||||    
T  37611177 ttgtgagattgtttgagagagcttatgaaaacaacttgtgacat-gttcataagctgttttcaggttatttccataa 37611252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 37787907 - 37787982
Alignment:
Q  97 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    ||||||||||||||| |||| || ||||||||| ||| ||| || ||||||||  ||||||||| ||||||||||||    
T  37787907 ttgtgagattgtttgagagagcttatgaaaacaacttgtgacat-gttcataagctgttttcaggttatttccataa 37787982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 203
Target Start/End: Complemental strand, 27028971 - 27028830
Alignment:
Q  66 acttatttgagtttatctaccggcataaattttgtgagattgtttgggag-aactatgaaaacagcttatgatattgttcataaattgttttcagcttat 164  Q
    ||||||||||||||||| || ||||||| ||| ||||||||||||||||| || | ||||||||||||| || ||| |||||||  | ||||||||||||    
T  27028971 acttatttgagtttatccactggcataagtttagtgagattgtttgggagaaattctgaaaacagcttaggacatttttcataagctattttcagcttat 27028872  T
Q  165 ttccataa---attccagatagcttgtgaaaacagcttatag 203  Q
    || |||||    | | ||||||||| ||||||||||||||||    
T  27028871 tttcataagctctccaagatagcttatgaaaacagcttatag 27028830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 61 - 171
Target Start/End: Original strand, 32840911 - 32841022
Alignment:
Q  61 aattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcag 159  Q
    |||||||||| ||||| ||||||||   || || ||||| |||| |||||||||||||| ||||||||| ||||||| ||||||||||| ||||||||||    
T  32840911 aattgacttacttgagcttatctactcacacaagttttgcgagactgtttgggagaacttatgaaaacaacttatgacattgttcataagttgttttcag 32841010  T
Q  160 cttatttccata 171  Q
    ||||||| ||||    
T  32841011 cttattttcata 32841022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 62 - 172
Target Start/End: Complemental strand, 6950466 - 6950355
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaa-ttttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcag 159  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| | |||| ||||| | ||||| | |||  |||| ||||||||||    
T  6950466 attgacttatttgagtttatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaacctatgaca-tgtcgataagttgttttcag 6950368  T
Q  160 cttatttccataa 172  Q
    |||||||||||||    
T  6950367 cttatttccataa 6950355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 62 - 172
Target Start/End: Complemental strand, 33808446 - 33808336
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    ||||||||||| ||| |||| ||  ||| ||| |||| || ||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||| |||    
T  33808446 attgacttattcgagcttatgtagtggc-taagttttttgtgattgtttgggagaacttatgaaaatagcttatgatattgttcataagttgtttttagc 33808348  T
Q  161 ttatttccataa 172  Q
    |||||| |||||    
T  33808347 ttattttcataa 33808336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 3536934 - 3536982
Alignment:
Q  124 aaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3536934 aaacagcttatgacattgttcataaattgttttcagcttatttccataa 3536982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 42893420 - 42893492
Alignment:
Q  66 acttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgat 137  Q
    |||||||||||||||||||||||||||| |||||||  | ||||||||||||| ||| |||||||||||||||    
T  42893420 acttatttgagtttatctaccggcataatttttgtgctagtgtttgggagaacttataaaaacagcttatgat 42893492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 202
Target Start/End: Complemental strand, 1930163 - 1930035
Alignment:
Q  78 ttatctaccggcataaattttgtgagattgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaatt- 175  Q
    |||||||| | ||||| |||||||| ||| ||||||||||||  ||||||||| |||||| |||||||||||  |||||||||||||||| || ||  |     
T  1930163 ttatctactgacataagttttgtgacattatttgggagaacttgtgaaaacagtttatgacattgttcataagctgttttcagcttattttcacaaggtc 1930064  T
Q  176 --ccagatagcttgtgaaaacagcttata 202  Q
      | ||||||||| |||||||||||||||    
T  1930063 accaagatagcttatgaaaacagcttata 1930035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 136
Target Start/End: Complemental strand, 26771403 - 26771334
Alignment:
Q  68 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    |||| |||| |||||||| ||||||| |||||||||| ||||||||||||| ||||||||||||||||||    
T  26771403 ttatctgagcttatctacgggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatga 26771334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 202
Target Start/End: Original strand, 30251380 - 30251524
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||| |||||||||| |||||||| | ||||| ||| |||||| ||||||||||||| || |||||||||||||   ||| |||||||  | ||| ||||    
T  30251380 attggcttatttgagcttatctactgacataagtttcgtgagactgtttgggagaacttacgaaaacagcttattgcatttttcataagctttttacagc 30251479  T
Q  161 ttatttccataaat--tcc-agatagcttgtgaaaacagcttata 202  Q
    |||||| ||||| |  ||| ||||||||| |||||||||||||||    
T  30251480 ttattttcataagtggtccaagatagcttatgaaaacagcttata 30251524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 29168016 - 29168094
Alignment:
Q  95 ttttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||||| |||||||||||||| || ||||||| |||||| ||| |||||||||  || |||||||||||||||||    
T  29168016 ttttgtgagactgtttgggagaacttataaaaacagattatgacatttttcataaatgtttctcagcttatttccataa 29168094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 31716158 - 31716264
Alignment:
Q  67 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaactat-gaaaacagcttatgatattgttcataaattgttttcagcttatt 165  Q
    |||||||||| |||||||  ||||||  |||| ||||| ||||| |||||||| | ||||||||||||||| ||| |||||||  | |||||||||||||    
T  31716158 cttatttgagcttatctattggcatattttttttgagactgtttcggagaacttttgaaaacagcttatgacattcttcataagcttttttcagcttatt 31716257  T
Q  166 tccataa 172  Q
    || ||||    
T  31716258 tctataa 31716264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 42215277 - 42215343
Alignment:
Q  106 tgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||  |||||||||||||||| |||||    
T  42215277 tgtttgggagaactaatgaaaacagcttatgac-ttgttcataagctgttttcagcttatttacataa 42215343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 1058008 - 1058113
Alignment:
Q  67 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttatt 165  Q
    |||||||||| ||||||||   ||||| |||||||||| ||||||||||||| | ||||||| |||||||| ||| ||||| | || ||||| |||||||    
T  1058008 cttatttgagcttatctacttacataagttttgtgagactgtttgggagaacttttgaaaactgcttatgacatttttcattagtt-ttttccgcttatt 1058106  T
Q  166 tccataa 172  Q
    | |||||    
T  1058107 ttcataa 1058113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 112
Target Start/End: Original strand, 1892143 - 1892201
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaa-ttttgtgagattgtttgg 112  Q
    |||||| |||||||||||||||||||||||||| ||||||   ||||||||||||||||    
T  1892143 tgtttagattgacttatttgagtttatctaccgtcataaacacttgtgagattgtttgg 1892201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 166
Target Start/End: Original strand, 14280347 - 14280453
Alignment:
Q  62 attgacttatttgagtttatctaccggcataa-attttgtgagattgtttgggagaa-ctatgaaaacagcttatgatattgttcataaattgttttcag 159  Q
    |||||||||||||| ||||||||| |||||||  ||||||| ||||||||||| |||  ||||||||||  |||||| ||||||| |||   ||||| ||    
T  14280347 attgacttatttgattttatctactggcataagtttttgtgtgattgtttgggtgaatttatgaaaacaatttatgacattgttcgtaagccgtttttag 14280446  T
Q  160 cttattt 166  Q
    |||||||    
T  14280447 cttattt 14280453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 136
Target Start/End: Original strand, 35534532 - 35534614
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    |||||| | ||||||||||||| ||||||||   ||||| |||||||||| |||||| |||||| | ||||||||||||||||    
T  35534532 tgtttagaatgacttatttgagcttatctactaacataagttttgtgagactgtttgagagaacttgtgaaaacagcttatga 35534614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 41606875 - 41606940
Alignment:
Q  107 gtttgggagaa-ctatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    ||||||||||| ||| ||||||||||||||| || ||||| || |||||||||||||||||||||||    
T  41606875 gtttgggagaaactacgaaaacagcttatgacat-gttcaaaagttgttttcagcttatttccataa 41606940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 36963280 - 36963337
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact 119  Q
    |||| |||||||||| | |||||| ||||||| |||||||||| ||||||||||||||    
T  36963280 attggcttatttgagctaatctactggcataagttttgtgagactgtttgggagaact 36963337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 38602471 - 38602414
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact 119  Q
    ||||||||||||||| |||||||| | ||||| |||||||||  ||||||||||||||    
T  38602471 attgacttatttgagcttatctactgacataagttttgtgaggctgtttgggagaact 38602414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 1096634 - 1096578
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac 118  Q
    |||||||||||||||||||| ||  | ||||| |||||||||||| |||||||||||    
T  1096634 attgacttatttgagtttatttagtgacataagttttgtgagattttttgggagaac 1096578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 293
Target Start/End: Complemental strand, 1930032 - 1929968
Alignment:
Q  229 taacttcactttttctttttctatcgaaatagcttatccgtatgcgcttgtgctataagctgcaa 293  Q
    |||||| | ||| ||||||||||| |||||| ||||| | || ||||||||||||||||||||||    
T  1930032 taactttattttatctttttctatagaaataacttatacataagcgcttgtgctataagctgcaa 1929968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 177
Target Start/End: Complemental strand, 27493077 - 27492965
Alignment:
Q  66 acttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttat 164  Q
    ||||||||||| |||||| | || |||| |||||| | ||| ||||||||| || |||||||||  || ||| |||||||||||  | |||||| |||||    
T  27493077 acttatttgagcttatctgctggtataagttttgtcatattatttgggagagcttatgaaaacaagttgtgacattgttcataagctattttcaacttat 27492978  T
Q  165 ttccataaattcc 177  Q
    || ||||||||||    
T  27492977 tttcataaattcc 27492965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 173
Target Start/End: Original strand, 30191072 - 30191179
Alignment:
Q  67 cttatttgagtttatctaccggcataaatt-ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttat 164  Q
    ||||||||||||||||||  |||||||    |||| ||| ||||||||||| || ||| ||||| ||||||| || ||||| || |||||||||||||||    
T  30191072 cttatttgagtttatctattggcataagcacttgttagactgtttgggagagcttatggaaacaacttatgacat-gttcaaaacttgttttcagcttat 30191170  T
Q  165 ttccataaa 173  Q
    |||||||||    
T  30191171 ttccataaa 30191179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 38648495 - 38648420
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    |||| ||||||| || |||||||| | ||||| |||||||||| ||||||||||| | ||||||||||||| ||||    
T  38648495 attggcttatttaagattatctactgacataagttttgtgagactgtttgggagaccttatgaaaacagctcatga 38648420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 38750495 - 38750424
Alignment:
Q  68 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgata 138  Q
    ||||||||||||||||||  |||||| |||||||||||| ||||  ||||| ||||| |||| |||||||||    
T  38750495 ttatttgagtttatctacttgcataagttttgtgagattatttgaaagaacttatgagaacaccttatgata 38750424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 138
Target Start/End: Complemental strand, 6882044 - 6881994
Alignment:
Q  89 cataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatgata 138  Q
    ||||| |||||||||| |||||||||||| |||||||||||||| ||||||    
T  6882044 cataagttttgtgagactgtttgggagaacctatgaaaacagctcatgata 6881994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 93
Target Start/End: Complemental strand, 7008749 - 7008711
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataa 93  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  7008749 tgtttgaattgacttatttgagtttatctactggcataa 7008711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 28763485 - 28763439
Alignment:
Q  89 cataaattttgtgagattgtttgggagaac-tatgaaaacagcttat 134  Q
    ||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  28763485 cataagttttgtgagactgtttgggagaacttatgaaaacagcttat 28763439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 29205804 - 29205758
Alignment:
Q  214 tatacaaaaacaatctaacttcactttttctttttctatcgaaatag 260  Q
    |||||||||||||| |||||||| ||| ||||||||||| |||||||    
T  29205804 tatacaaaaacaatttaacttcattttatctttttctatagaaatag 29205758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 10383970 - 10383918
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||||||||||||| ||| |||||||  ||||| ||||||||||||||||    
T  10383970 tatgaaaacagcttatgacatt-ttcataagctgtttacagcttatttccataa 10383918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 176
Target Start/End: Complemental strand, 11376848 - 11376732
Alignment:
Q  61 aattgacttatttgagtttatctaccggcataaatt-ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttca 158  Q
    ||||| |||||||||| |||||||| |  |||| || |||||||| | |||||||||||| ||||||| ||||| ||| || ||| |||  |||||||||    
T  11376848 aattggcttatttgagcttatctactgatataagttcttgtgagactatttgggagaacttatgaaaatagcttgtgacat-gttaatatcttgttttca 11376750  T
Q  159 gcttatttccataaattc 176  Q
    |||||||| |||| ||||    
T  11376749 gcttattttcatagattc 11376732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 13459730 - 13459678
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||||||||||||| ||| |||||||| |||||||||| ||||| |||||    
T  13459730 tatgaaaacagcttatgacatt-ttcataaactgttttcagcctattttcataa 13459678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 30657706 - 30657751
Alignment:
Q  65 gacttatttgagtttatctaccggcataaattttgtgagattgttt 110  Q
    ||||||||||||||||||||  | |||||||||||||||| |||||    
T  30657706 gacttatttgagtttatctaatgacataaattttgtgagactgttt 30657751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 172
Target Start/End: Complemental strand, 30918220 - 30918146
Alignment:
Q  97 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||| |||||| |||| || ||||||||| ||| ||| |||  |||||| |||||||||||||||||||||||    
T  30918220 ttgtgagactgtttgagagagcttatgaaaacaacttgtgacatt--tcataagttgttttcagcttatttccataa 30918146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 42043291 - 42043368
Alignment:
Q  72 ttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataa 148  Q
    ||||| |||| ||| | ||||| |||| ||||| |||| |||||||| |||| ||||||||||||||||| |||||||    
T  42043291 ttgagcttatttactgtcataagttttatgagactgttcgggagaacatatggaaacagcttatgatatttttcataa 42043368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 16162904 - 16162828
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaa-ttttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    |||| |||||||||||||||||||  |||||||   |||||||| |||||| || ||| ||||||||||||||||||    
T  16162904 attggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagcttatga 16162828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 16915833 - 16915877
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagatt 106  Q
    ||||| ||||||||||||||||||   ||||||||||||||||||    
T  16915833 attgatttatttgagtttatctacttacataaattttgtgagatt 16915877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 31751546 - 31751594
Alignment:
Q  124 aaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    ||||||||||||| |||||||||||  | |||||||||||||| |||||    
T  31751546 aaacagcttatgacattgttcataagctattttcagcttattttcataa 31751594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 129
Target Start/End: Original strand, 43717860 - 43717928
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacag 129  Q
    |||| |||||||||| |||||||  | ||||| |||||||||| | ||||||||||| |||||||||||    
T  43717860 attggcttatttgagcttatctattgacataagttttgtgagactatttgggagaacttatgaaaacag 43717928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 172
Target Start/End: Complemental strand, 44401626 - 44401594
Alignment:
Q  140 tgttcataaattgttttcagcttatttccataa 172  Q
    |||||||| ||||||||||||||||||||||||    
T  44401626 tgttcatacattgttttcagcttatttccataa 44401594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 1e-20; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 172
Target Start/End: Original strand, 52315123 - 52315234
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||||||||||||||||||||||| | | ||| |||||||||||||||||| ||||| ||| |||||| ||||| | ||| ||||||| ||| |||||||    
T  52315123 attgacttatttgagtttatctactgacgtaagttttgtgagattgtttggaagaacttatcaaaacaacttatcacattattcataagttgctttcagc 52315222  T
Q  161 ttatttccataa 172  Q
    |||||| |||||    
T  52315223 ttattttcataa 52315234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 68 - 176
Target Start/End: Original strand, 21731588 - 21731697
Alignment:
Q  68 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttattt 166  Q
    |||||||||  ||||||| | ||||| |||||||||||||||||||||||| |||||||||||||||| | | | |||||||| | |||||| |||| ||    
T  21731588 ttatttgagcatatctactgacataagttttgtgagattgtttgggagaacttatgaaaacagcttatcacaattttcataaacttttttcaacttactt 21731687  T
Q  167 ccataaattc 176  Q
     |||||||||    
T  21731688 tcataaattc 21731697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 63 - 166
Target Start/End: Original strand, 25904150 - 25904254
Alignment:
Q  63 ttgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagct 161  Q
    |||||||||||||| ||||| |  | |||||||||||||||| ||||||||||| | |||||||||||||||||  ||| |||||||  | |||||||||    
T  25904150 ttgacttatttgagcttatccaatgacataaattttgtgagactgtttgggagagcttatgaaaacagcttatgccatttttcataagcttttttcagct 25904249  T
Q  162 tattt 166  Q
    |||||    
T  25904250 tattt 25904254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 66 - 203
Target Start/End: Original strand, 17822795 - 17822936
Alignment:
Q  66 acttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttat 164  Q
    ||||||||||| |||||||| | ||||| || ||||||| | ||| ||||||| |||||||||||||||||| ||| |||||||  | |||| |||||||    
T  17822795 acttatttgagcttatctactgacataagttctgtgagactatttaggagaacatatgaaaacagcttatgacatttttcataagctttttttagcttat 17822894  T
Q  165 ttccataaatt---ccagatagcttgtgaaaacagcttatag 203  Q
    || ||||| ||   | ||||||||| |||||||| |||||||    
T  17822895 tttcataagttctccaagatagcttatgaaaacaacttatag 17822936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 55 - 165
Target Start/End: Original strand, 49939870 - 49939981
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgt 153  Q
    ||||| ||||| ||||||| || ||||||||  ||||||  ||||||||| | ||||| |||||| ||||||| ||||||||| |||||||||||  |||    
T  49939870 tgtttcaattggcttatttaagcttatctactagcataagctttgtgagactatttggaagaacttatgaaaagagcttatgacattgttcataagctgt 49939969  T
Q  154 tttcagcttatt 165  Q
    ||||||||||||    
T  49939970 tttcagcttatt 49939981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 173
Target Start/End: Original strand, 1374502 - 1374614
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||| |||| ||||| ||||||||  |||||||||||||||   ||||||||||||  |||||||||| ||||||| | | |||||||||| |||||| |    
T  1374502 attggcttaattgagcttatctactagcataaattttgtgattctgtttgggagaatatatgaaaacaacttatgacaatattcataaattattttcaac 1374601  T
Q  161 ttatttccataaa 173  Q
    |||||| ||||||    
T  1374602 ttattttcataaa 1374614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 7367980 - 7368056
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaa-ttttgtgagattgtttgggagaact-atgaaaacagcttatga 136  Q
    |||||||||||||||||||||||| ||||||||   |||||||| ||||||||||| || |||||||||||||||||    
T  7367980 attgacttatttgagtttatctacaggcataaacgcttgtgagactgtttgggagagctcatgaaaacagcttatga 7368056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 176
Target Start/End: Complemental strand, 41336904 - 41336789
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    ||||||||||||||||||||||||   ||||| ||||||||||| ||| || ||||| || ||||||||||||||| | | |||||||  | |||||| |    
T  41336904 attgacttatttgagtttatctactcacataagttttgtgagatagttaggaagaacttaagaaaacagcttatgacagttttcataagcttttttcaac 41336805  T
Q  161 ttatttccataaattc 176  Q
    |||||| | |||||||    
T  41336804 ttattttcgtaaattc 41336789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 54426187 - 54426112
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    |||| |||||||||| |||||||| ||||||| |||||||||| || |||||||||| || |||||||||||||||    
T  54426187 attggcttatttgagcttatctactggcataagttttgtgagactgcttgggagaacttaggaaaacagcttatga 54426112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 29657527 - 29657453
Alignment:
Q  63 ttgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    |||||||||||||| |||||||||  || || ||||||||||||| ||| |||||| ||||||||||||||||||    
T  29657527 ttgacttatttgagcttatctaccaacacaagttttgtgagattgcttgagagaacttatgaaaacagcttatga 29657453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 147
Target Start/End: Complemental strand, 55437220 - 55437134
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcata 147  Q
    |||| ||||||||||||||||||| | ||||| |||||||| ||||||||  ||||| |||||||||| |||||||  |||||||||    
T  55437220 attggcttatttgagtttatctactgccataagttttgtgaaattgtttgaaagaacttatgaaaacaacttatgacgttgttcata 55437134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 172
Target Start/End: Complemental strand, 24169407 - 24169296
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||| |||||| |||||||||||| ||||||| |||||||||| | |||| |||||| | | |||| ||||||||| ||| |||||||  | |||||| |    
T  24169407 attggcttattagagtttatctactggcataagttttgtgagactatttgagagaacttttaaaaatagcttatgacatttttcataagattttttcaac 24169308  T
Q  161 ttatttccataa 172  Q
    |||||| |||||    
T  24169307 ttattttcataa 24169296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 164
Target Start/End: Original strand, 27043756 - 27043859
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    ||||||||||||||| |||||||| | ||||| |||||||| | ||||||| ||||  |||| ||| ||||||||  || || ||||||||||||| |||    
T  27043756 attgacttatttgagcttatctactgacataagttttgtgaaactgtttggaagaagttatgcaaatagcttatggcatcgtccataaattgtttttagc 27043855  T
Q  161 ttat 164  Q
    ||||    
T  27043856 ttat 27043859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 203
Target Start/End: Original strand, 35571557 - 35571702
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||| |||||||||| ||||||||  |||||| ||||||| ||| |||||||||||| | | |||||||||||| | | ||||||| |  || ||||| |    
T  35571557 attggcttatttgagcttatctactagcataagttttgtgggatagtttgggagaacttttaaaaacagcttattacactgttcatgagctggtttcaac 35571656  T
Q  161 ttatttccataaattc---cagatagcttgtgaaaacagcttatag 203  Q
    |||||| || || |||    ||||||||| ||||||||||||||||    
T  35571657 ttattttcacaagttctctaagatagcttatgaaaacagcttatag 35571702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 39011054 - 39011129
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    ||||||||||||||| |||||| | ||||||| | | ||||||  |||||||||||| ||||||||||||||||||    
T  39011054 attgacttatttgagcttatcttcgggcataagtatcgtgagacagtttgggagaacatatgaaaacagcttatga 39011129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 148
Target Start/End: Complemental strand, 1706757 - 1706679
Alignment:
Q  71 tttgagtttatctaccggcataaattttgtgagattgtttgggag-aactatgaaaacagcttatgatattgttcataa 148  Q
    ||||||||||||||| | ||||| ||||||||||  ||||| ||| || |||||||||||||||||  |||||||||||    
T  1706757 tttgagtttatctactgacataagttttgtgagacggtttgagagaaattatgaaaacagcttatggcattgttcataa 1706679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 39691068 - 39691130
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa 117  Q
    ||||| |||||||||||||||| ||||||||  |||||| |||||||||| |||||| |||||    
T  39691068 tgtttgaattgacttatttgagcttatctactagcataagttttgtgagactgtttgagagaa 39691130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 158
Target Start/End: Original strand, 15173229 - 15173326
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggaga-actatgaaaacagcttatgatattgttcataaattgttttca 158  Q
    ||||||||||||||  |||||||| | ||||| |||||||||| |||||||||||   |||||||| ||||||||| | | ||||||| || ||||||    
T  15173229 attgacttatttgaacttatctactgacataagttttgtgagactgtttgggagactttatgaaaatagcttatgacaattttcataagtttttttca 15173326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 24929578 - 24929526
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||| ||||||||||||  || ||||||||||||||||||||||||||||||||    
T  24929578 tatggaaacagcttatggcat-gttcataaattgttttcagcttatttccataa 24929526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 166
Target Start/End: Complemental strand, 25571403 - 25571299
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||| ||||||||||||||||||| | ||||| ||   ||| | ||||| ||||||| |||| |||||| |||||||| |||||||||  ||||||||||    
T  25571403 attggcttatttgagtttatctactgacataagttacatgaaactgtttaggagaacttatggaaacagtttatgata-tgttcataagctgttttcagc 25571305  T
Q  161 ttattt 166  Q
    ||||||    
T  25571304 ttattt 25571299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 29263450 - 29263406
Alignment:
Q  124 aaacagcttatgatattgttcataaattgttttcagcttatttcca 169  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||    
T  29263450 aaacagcttatgatat-gttcataagttgttttcagcttatttcca 29263406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 203
Target Start/End: Complemental strand, 679318 - 679254
Alignment:
Q  139 ttgttcataaattgttttcagcttatttccataaattccagatagcttgtgaaaacagcttatag 203  Q
    |||||| |||| |||||| ||||||||| ||||| ||| ||||| ||| ||||||||||||||||    
T  679318 ttgttcctaaactgttttgagcttattttcataagttcaagataacttatgaaaacagcttatag 679254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 172
Target Start/End: Complemental strand, 1137820 - 1137745
Alignment:
Q  97 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||| | ||||| |||||||| ||||||||| ||||||| || |||||||| |||||||||| ||||||||||||    
T  1137820 ttgtgacactgtttaggagaacttatgaaaacatcttatgacat-gttcataagttgttttcagtttatttccataa 1137745  T

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Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 172
Target Start/End: Original strand, 6987667 - 6987778
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaat-tttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcag 159  Q
    ||||||||| ||||||||||||||  |||||| | ||||||||| ||||||||||| | |||| | ||| ||||||| | ||| |||||| | ||||||     
T  6987667 attgacttaattgagtttatctactagcataagtgtttgtgagactgtttgggagagcttatggatacaacttatgaca-tgtccataaactattttcaa 6987765  T
Q  160 cttatttccataa 172  Q
    |||||||||||||    
T  6987766 cttatttccataa 6987778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 89 - 172
Target Start/End: Original strand, 13126529 - 13126613
Alignment:
Q  89 cataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    ||||| |||||||||| ||||||| |||||| || |||||||||||||| |||  ||||||  | |||||||||||||| |||||    
T  13126529 cataagttttgtgagactgtttggaagaacttataaaaacagcttatgacatttatcataagcttttttcagcttattttcataa 13126613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 156
Target Start/End: Complemental strand, 28615478 - 28615384
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaa-ttttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgtttt 156  Q
    |||||||||||| |||||||||||  |||||||   |||||||||||||| ||||||| ||||||||||||| |||| ||| ||||||| |||||||    
T  28615478 attgacttatttaagtttatctactagcataaacacttgtgagattgttt-ggagaacttatgaaaacagctaatgacatt-ttcataagttgtttt 28615384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 40174701 - 40174633
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacag 129  Q
    ||||| ||||||||||||||||||   ||||| |||||||||| ||||||||| ||| |||||||||||    
T  40174701 attgatttatttgagtttatctactaacataagttttgtgagactgtttgggataacttatgaaaacag 40174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 7694015 - 7694081
Alignment:
Q  140 tgttcataaattgttttcagcttatttccataaa--ttcca-gatagcttgtgaaaacagcttatag 203  Q
    ||||||||| ||||||||||||||||||||||||   |||| |||| ||| ||||||||||||||||    
T  7694015 tgttcataagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatag 7694081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 21043162 - 21043237
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggaga-actatgaaaacagcttatga 136  Q
    ||||||||||||||||||| |||| ||||| ||  |||||||| |||||||||||   |||| |||||||||||||    
T  21043162 attgacttatttgagtttacctacaggcatgaaacttgtgagactgtttgggagaggttatggaaacagcttatga 21043237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 22030347 - 22030272
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    ||||||||||||||| || ||||   |||||| |||||||||  | ||||||||||| ||||||||||||||||||    
T  22030347 attgacttatttgagcttgtctattagcataagttttgtgagcctatttgggagaacttatgaaaacagcttatga 22030272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 172
Target Start/End: Complemental strand, 25332891 - 25332808
Alignment:
Q  90 ataaattttgtgagattgtttgggagaactat-gaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||| |||||||||| | ||||||||||||   ||||||| ||||||  ||| ||||||| ||||||||||||||||| |||||    
T  25332891 ataagttttgtgagactatttgggagaacttgcgaaaacaacttatggcattattcataagttgttttcagcttattttcataa 25332808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 88 - 166
Target Start/End: Complemental strand, 49202763 - 49202684
Alignment:
Q  88 gcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttattt 166  Q
    |||||| |||||||||| ||||||| |||||| || ||| ||| |||| | ||||||||||| ||||||||| |||||||    
T  49202763 gcataagttttgtgagactgtttggaagaacttataaaaccagattatcacattgttcataagttgttttcaacttattt 49202684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 170
Target Start/End: Complemental strand, 19305070 - 19304961
Alignment:
Q  62 attgacttatttgagtttatctaccggcataa-attttgtgagattgtttgggagaa-ctatgaaaacagcttatgatattgttcataaattgttttcag 159  Q
    ||||||||||||||| |||||||  | |||||   ||||||||||||| ||||||||  | || ||||||||||||| | ||| ||||| ||||||||||    
T  19305070 attgacttatttgagattatctattgacataagcatttgtgagattgtgtgggagaatttgtggaaacagcttatgaca-tgtccataagttgttttcag 19304972  T
Q  160 cttatttccat 170  Q
    ||| |||||||    
T  19304971 cttgtttccat 19304961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 20936214 - 20936266
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||||| |||||||||| ||||||||  |||||||| |||||||||||||    
T  20936214 tatgaaaacaacttatgatat-gttcataagctgttttcaccttatttccataa 20936266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 173
Target Start/End: Complemental strand, 35064920 - 35064887
Alignment:
Q  140 tgttcataaattgttttcagcttatttccataaa 173  Q
    |||| |||||||||||||||||||||||||||||    
T  35064920 tgtttataaattgttttcagcttatttccataaa 35064887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 173
Target Start/End: Original strand, 37575862 - 37575974
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaa-ttttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcag 159  Q
    |||||||||||||||||||||| |  ||||||| | | |||| |||||||| |||||| |||||||| | ||||| | | |  |||||| ||||||||||    
T  37575862 attgacttatttgagtttatctgctagcataaactctcgtgacattgtttgagagaacttatgaaaataacttataaca-tactcataagttgttttcag 37575960  T
Q  160 cttatttccataaa 173  Q
    || |||||||||||    
T  37575961 ctcatttccataaa 37575974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 87
Target Start/End: Complemental strand, 40613323 - 40613290
Alignment:
Q  54 ttgtttaaattgacttatttgagtttatctaccg 87  Q
    |||||| |||||||||||||||||||||||||||    
T  40613323 ttgtttcaattgacttatttgagtttatctaccg 40613290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 169
Target Start/End: Original strand, 50799992 - 50800064
Alignment:
Q  97 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttcca 169  Q
    ||||||||||||||||||||||| ||| ||||| ||||||| | |||  ||||  |||||||||||||||||||    
T  50799992 ttgtgagattgtttgggagaactaatgtaaacaacttatgaca-tgtctataagctgttttcagcttatttcca 50800064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 162
Target Start/End: Complemental strand, 20719834 - 20719746
Alignment:
Q  75 agtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagctt 162  Q
    |||||||||||  |||||| ||||||| || | ||||| |||||| | ||||||||||||||| ||||||  |||  ||||||||||||    
T  20719834 agtttatctactagcataagttttgtgcgactatttggaagaacttaagaaaacagcttatgacattgtttgtaagctgttttcagctt 20719746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 172
Target Start/End: Complemental strand, 21523674 - 21523591
Alignment:
Q  89 cataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||||||||| | ||||||| ||||  |||||||||| ||||||| ||| |||||||  | |||||||||||||| |||||    
T  21523674 cataaattttgtgacactgtttggaagaatttatgaaaacaacttatgacatttttcataagct-ttttcagcttattttcataa 21523591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 29388757 - 29388701
Alignment:
Q  63 ttgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact 119  Q
    |||||||||||||  ||||||||   ||||| |||||| ||||||||||||||||||    
T  29388757 ttgacttatttgaccttatctactaacataagttttgtaagattgtttgggagaact 29388701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 43506076 - 43506004
Alignment:
Q  65 gacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatga 136  Q
    |||||||||||||||||| |||| || || |||||||||| |||| ||||| |||  |||||| |||||||||    
T  43506076 gacttatttgagtttatccaccgacaaaagttttgtgagactgttagggaggactcgtgaaaatagcttatga 43506004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 172
Target Start/End: Complemental strand, 43824348 - 43824316
Alignment:
Q  140 tgttcataaattgttttcagcttatttccataa 172  Q
    ||||||||| |||||||||||||||||||||||    
T  43824348 tgttcataagttgttttcagcttatttccataa 43824316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 117
Target Start/End: Original strand, 44862917 - 44862965
Alignment:
Q  69 tatttgagtttatctaccggcataaattttgtgagattgtttgggagaa 117  Q
    |||||||| || ||||| |||| || |||||||||||||||||||||||    
T  44862917 tatttgagcttgtctactggcaaaagttttgtgagattgtttgggagaa 44862965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 148
Target Start/End: Original strand, 49003796 - 49003888
Alignment:
Q  57 tttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggag-aactatgaaaacagcttatgatattgttcataa 148  Q
    |||| ||||||||||||||| ||||| || | | ||| |||||||| |  ||||||||| || |||||||| ||| ||||| |||||||||||    
T  49003796 tttagattgacttatttgagcttatccactgacgtaagttttgtgaaacggtttgggagaaaatatgaaaagagcgtatgacattgttcataa 49003888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 5e-20; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 19302482 - 19302600
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatgatattgttcataaattgt 153  Q
    ||||| |||||||||||||||| |||||||| | ||||| |||||||||| | ||||||||||  |||||||||||||||||| | | |||||||| | |    
T  19302482 tgtttgaattgacttatttgagcttatctactgacataagttttgtgagaatatttgggagaatttatgaaaacagcttatgacaattttcataaacttt 19302581  T
Q  154 tttcagcttatttccataa 172  Q
    ||||| ||||||| |||||    
T  19302582 tttcaacttattttcataa 19302600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 89 - 172
Target Start/End: Original strand, 20526882 - 20526966
Alignment:
Q  89 cataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||||||||||| |||||| ||||||| ||||||||||||||||| |||||| ||||  | |||||||||||||| |||||    
T  20526882 cataaattttgtgagactgtttgagagaactgatgaaaacagcttatgagattgtttataagatcttttcagcttattttcataa 20526966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 62 - 203
Target Start/End: Complemental strand, 20526590 - 20526445
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||||||||||||||||||||||  || | ||||||||||||| |||||| |||||| ||||||||||| |||| | ||| ||| |||  |||||| |||    
T  20526590 attgacttatttgagtttatctattggtagaaattttgtgagactgtttgagagaacttatgaaaacagtttatcacatttttcgtaagctgtttttagc 20526491  T
Q  161 ttatttccataaatt---ccagatagcttgtgaaaacagcttatag 203  Q
    |||||| ||| | ||   | | ||||||| ||||||||||||||||    
T  20526490 ttattttcattagttctccaaaatagcttatgaaaacagcttatag 20526445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 62 - 202
Target Start/End: Complemental strand, 48470188 - 48470044
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||| |||||||||| |||||||  | ||||| |||| ||||||||||||||||||| |||||||||||||||||  ||| |||||||  | |||| |||    
T  48470188 attggcttatttgagcttatctatagacataagttttatgagattgtttgggagaacttatgaaaacagcttatggcatttttcataagcttttttgagc 48470089  T
Q  161 ttatttccataa---attccagatagcttgtgaaaacagcttata 202  Q
    |||| | |||||   |||| | ||||||| |||||||| ||||||    
T  48470088 ttatgttcataagttattcaaaatagcttatgaaaacaacttata 48470044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 166
Target Start/End: Complemental strand, 34036068 - 34035956
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgt 153  Q
    ||||| |||||||||||||||| |||||||| | ||||  | |||||||| |  |||| |||||| ||||||| | ||||||| ||||||||||| ||||    
T  34036068 tgtttgaattgacttatttgagcttatctactgacatatgtattgtgagactacttggaagaacttatgaaaataacttatgacattgttcataagttgt 34035969  T
Q  154 tttcagcttattt 166  Q
    ||||| |||||||    
T  34035968 tttcaacttattt 34035956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 19022527 - 19022622
Alignment:
Q  78 ttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||| | ||| | |||||||||||||||||||||||  |||||||||| ||||||| | | ||||||| |||| |||| ||||||| |||||    
T  19022527 ttatctactgacatgagttttgtgagattgtttgggagaatttatgaaaacaacttatgacaattttcataagttgtcttcaacttattttcataa 19022622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 19214348 - 19214443
Alignment:
Q  78 ttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    ||||||||  |||||| |||||||||||||||||||||||| ||||||||||||  |||| | | |||||||| |  ||||| ||||||| |||||    
T  19214348 ttatctacatgcataagttttgtgagattgtttgggagaacttatgaaaacagcaaatgacaattttcataaacttgtttcaacttattttcataa 19214443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 203
Target Start/End: Complemental strand, 33678908 - 33678779
Alignment:
Q  78 ttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaatt- 175  Q
    ||||||||  |||||| ||||||||||   ||||||||||| |||||||||| ||||| | ||||||||| |  |||||||| ||||||| || || ||     
T  33678908 ttatctacttgcataagttttgtgagacaatttgggagaacttatgaaaacaacttataacattgttcatgagatgttttcaacttattttcacaagttt 33678809  T
Q  176 --ccagatagcttgtgaaaacagcttatag 203  Q
      | ||||||||| ||||||||||||||||    
T  33678808 tccaagatagcttatgaaaacagcttatag 33678779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 137
Target Start/End: Original strand, 22296146 - 22296231
Alignment:
Q  54 ttgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac--tatgaaaacagcttatgat 137  Q
    |||||| ||||||||||||||||||||||    | ||||| || |||||||||||||||||||||  ||| |||| ||||||||||    
T  22296146 ttgtttgaattgacttatttgagtttatccggtgacataagttctgtgagattgtttgggagaactttatcaaaatagcttatgat 22296231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 21568447 - 21568532
Alignment:
Q  88 gcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    ||||| ||||||||||| ||||||||||||| |||||||||||||||| | | | |||||||  | |||||| |||| ||||||||    
T  21568447 gcatatattttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctcttttcaacttagttccataa 21568532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 22283572 - 22283629
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact 119  Q
    ||||||||||||||  |||||||| | |||||||||||||||| ||||| ||||||||    
T  22283572 attgacttatttgaacttatctactgtcataaattttgtgagactgtttaggagaact 22283629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 25596174 - 25596101
Alignment:
Q  64 tgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatga 136  Q
    ||||||||||||| ||||||||| ||||||   ||||||||||||| |||| || |||| ||||||||||||||    
T  25596174 tgacttatttgagcttatctaccagcataagcattgtgagattgttagggaaaacctataaaaacagcttatga 25596101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 39968006 - 39967919
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaattc---cagatagcttgtgaaaacagcttatag 203  Q
    |||||||||||||||||  |||||||||||  |||||||| ||||||| ||| | |||   |||||||||| |||||||| |||||||    
T  39968006 tatgaaaacagcttatggcattgttcataagctgttttcaacttattttcattagttctctcagatagcttatgaaaacaacttatag 39967919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 202
Target Start/End: Complemental strand, 44822102 - 44821959
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||||||||||||||||||||| | | ||||| |||||||||||||||| | ||| || | ||||||| ||||  | | |||  |||| ||||||||| |    
T  44822102 attgacttatttgagtttatctgctgacataagttttgtgagattgtttagcagacctcacgaaaacaactta-aaaaatgtcaataagttgttttcaac 44822004  T
Q  161 ttatttccataaat--tccag-atagcttgtgaaaacagcttata 202  Q
    |||||| ||||| |  ||||| ||||||| |||||||||||||||    
T  44822003 ttattttcataagttctccagaatagcttatgaaaacagcttata 44821959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 166
Target Start/End: Original strand, 25670510 - 25670617
Alignment:
Q  60 aaattgacttatttgagtttatctaccggcataaatt-ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttc 157  Q
    ||||||||||| ||||| |||||||  | |||||  | |||||||| |||||| || |||| ||||||||| ||||||| || ||| |||||||||||||    
T  25670510 aaattgacttacttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaacttatgacat-gttaataaattgttttc 25670608  T
Q  158 agcttattt 166  Q
    |||||||||    
T  25670609 agcttattt 25670617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 163
Target Start/End: Original strand, 33601342 - 33601438
Alignment:
Q  68 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagctta 163  Q
    ||||||||| |||||||  ||||||| |||||||||| | |||  ||||||| ||||||||||||||||| | | |||||||  | |||||||||||    
T  33601342 ttatttgagcttatctattggcataagttttgtgagactcttttcgagaacttatgaaaacagcttatgacacttttcataagcttttttcagctta 33601438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 203
Target Start/End: Complemental strand, 30535714 - 30535562
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaa-ttttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattg 152  Q
    ||||| |||||||||||||||||| || ||| | ||||||   ||| |||| ||||| ||||||| |||||||||| ||||||||| ||||| |||  ||    
T  30535714 tgtttgaattgacttatttgagttaatttactgacataaacacttgagagactgttttggagaacttatgaaaacaacttatgata-tgttcgtaagctg 30535616  T
Q  153 ttttcagcttatttccataaattc---cagatagcttgtgaaaacagcttatag 203  Q
    ||||||| |||||| ||||  |||    ||||||||| || |||||||||||||    
T  30535615 ttttcaggttattttcatatgttctataagatagcttatggaaacagcttatag 30535562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 33266412 - 33266467
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa 117  Q
    ||||||||||||||| |||||||||| ||||| |||||||| | | ||||||||||    
T  33266412 attgacttatttgagcttatctaccgacataagttttgtgaaactatttgggagaa 33266467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 4970718 - 4970792
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatg 135  Q
    ||||||||||||||| ||||||   | ||||| | |||||||| ||||||||||||| |||||||||| ||||||    
T  4970718 attgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgggagaacttatgaaaacaacttatg 4970792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 68 - 172
Target Start/End: Complemental strand, 36517715 - 36517612
Alignment:
Q  68 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttattt 166  Q
    ||||||||| ||| |||| ||||||| |||| | ||| ||||||||||||| ||| |||||||||  ||| |||||||||||  | ||||||| ||||||    
T  36517715 ttatttgagcttagctactggcataagttttctaagactgtttgggagaacttattaaaacagct--tgacattgttcataagctattttcagtttattt 36517618  T
Q  167 ccataa 172  Q
     |||||    
T  36517617 tcataa 36517612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 46280211 - 46280282
Alignment:
Q  67 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac----tatgaaaacagcttat 134  Q
    ||||||||||||||||| | | ||||  |||||||||| |||||||||||||    ||||||||||||||||    
T  46280211 cttatttgagtttatctgctgacatatgttttgtgagactgtttgggagaacttattatgaaaacagcttat 46280282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 20234611 - 20234535
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaactatgaaaacagctt 132  Q
    ||||| ||||| |||||||||| |||| |||  |||||| |||||||||| | |||||||||||| ||| ||||||||    
T  20234611 tgtttcaattggcttatttgagcttatatacttgcataagttttgtgagactttttgggagaact-tgacaacagctt 20234535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 172
Target Start/End: Complemental strand, 25511707 - 25511659
Alignment:
Q  123 aaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||||||||| || ||||||||||||| |||| |||||||||||||    
T  25511707 aaaacagcttatgacat-gttcataaattgtcttcaacttatttccataa 25511659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 28128362 - 28128436
Alignment:
Q  97 ttgtgagattgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaattc 176  Q
    |||||||||||||| ||||||||  |||||||| ||||||      | ||| |||||||||||||||||||||||||||||    
T  28128362 ttgtgagattgttttggagaacttgtgaaaacaacttatg------tgcatgaattgttttcagcttatttccataaattc 28128436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 31744942 - 31744897
Alignment:
Q  66 acttatttgagtttatctaccggcataaattttgtgagattgtttg 111  Q
    |||||||||| ||||||||||| | |||||||| ||||||||||||    
T  31744942 acttatttgaatttatctaccgacgtaaattttatgagattgtttg 31744897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 173
Target Start/End: Complemental strand, 33894735 - 33894659
Alignment:
Q  97 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaa 173  Q
    |||||||| |||||| |||| || ||||||||||| ||||| || || ||||| |||||||||||||||||| |||||    
T  33894735 ttgtgagactgtttgtgagagcttatgaaaacagcatatgacat-gtccataagttgttttcagcttatttcaataaa 33894659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 45338597 - 45338540
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact 119  Q
    |||| |||||||||||||||| ||  |||||| |||| ||||| ||||||||||||||    
T  45338597 attggcttatttgagtttatccactagcataagttttttgagactgtttgggagaact 45338540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 62 - 129
Target Start/End: Original strand, 20526216 - 20526284
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacag 129  Q
    |||| ||| |||||||||||| |  |||||  |||||||||||||||||| |||||| |||||||||||    
T  20526216 attggcttgtttgagtttatccattggcatgcattttgtgagattgtttgagagaacttatgaaaacag 20526284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 172
Target Start/End: Original strand, 46104497 - 46104604
Alignment:
Q  66 acttatttgagtttatctaccggcataaa-ttttgtgagattgtttgggaga-actatgaaaacagcttatgatattgttcataaattgttttcagctta 163  Q
    ||||||||||| |||||||||| |||||| | |||||| ||||||||||| | | |||||||||| || |||| | |||  ||||| ||||| |||||||    
T  46104497 acttatttgagcttatctaccgtcataaactcttgtgatattgtttgggaaagattatgaaaacaactcatgaca-tgtcaataaaatgtttccagctta 46104595  T
Q  164 tttccataa 172  Q
    ||| |||||    
T  46104596 ttttcataa 46104604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 34910340 - 34910446
Alignment:
Q  67 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatgatattgttcataaattgttttcagcttatt 165  Q
    ||||||||||||||||||| |  || | ||||| |||||||||||| |||| ||||||||||||||||||| ||||||||| | |||||||| ||||| |    
T  34910340 cttatttgagtttatctactgatatcagttttgggagattgtttggaagaaactatgaaaacagcttatgacattgttcatgagttgttttccgcttact 34910439  T
Q  166 tccataa 172  Q
    | |||||    
T  34910440 ttcataa 34910446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 78 - 171
Target Start/End: Complemental strand, 31813289 - 31813195
Alignment:
Q  78 ttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccata 171  Q
    |||| ||| ||||||| |||||||||| | |||||||||||| |||||||  |||||||| |||||||||||   ||||||||||||||| ||||    
T  31813289 ttatttactggcataagttttgtgagactatttgggagaacttatgaaaattgcttatgagattgttcataagccgttttcagcttattttcata 31813195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 66 - 176
Target Start/End: Original strand, 34404656 - 34404766
Alignment:
Q  66 acttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttat 164  Q
    ||||||||||||||||| || | ||||| ||||||| || | ||||||||||| |||||||| | ||||||| | ||| |||||  |||||||||| |||    
T  34404656 acttatttgagtttatcaactgacataagttttgtgtgagtctttgggagaacttatgaaaatatcttatgaca-tgtacataagctgttttcagcatat 34404754  T
Q  165 ttccataaattc 176  Q
    || |||||||||    
T  34404755 tttcataaattc 34404766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 136
Target Start/End: Complemental strand, 31623701 - 31623619
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    ||||| ||||||||||||||| ||||||||| ||| ||| |||| |||| | |||||||||||| | |||||| |||||||||    
T  31623701 tgtttgaattgacttatttgaatttatctactggcctaagttttttgaggtggtttgggagaacttctgaaaatagcttatga 31623619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 2455126 - 2455030
Alignment:
Q  68 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgttttcagcttattt 166  Q
    ||||||||  ||||||||   ||||| |||||||||| ||||||||||||||  |||||||   |||||| |||||||||||  ||||||||||||||||    
T  2455126 ttatttgaacttatctactaacataagttttgtgagactgtttgggagaacttctgaaaac---ttatgacattgttcataacctgttttcagcttattt 2455030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 173
Target Start/End: Complemental strand, 34939824 - 34939776
Alignment:
Q  124 aaacagcttatgatattgttcataaattgttttcagcttatttccataaa 173  Q
    ||||||||||||| || || ||||||||||||||||||||||||||||||    
T  34939824 aaacagcttatgacat-gtccataaattgttttcagcttatttccataaa 34939776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 62 - 173
Target Start/End: Complemental strand, 848132 - 848021
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||| |||||||||| |||||||  | ||||| |||||||||| ||||||| |||||| || ||||| |||||||| ||| ||| |||  | ||||||||    
T  848132 attgccttatttgagcttatctatag-cataagttttgtgagactgtttggaagaacttataaaaactgcttatgacatttttcttaagcttttttcagc 848034  T
Q  161 ttatttccataaa 173  Q
    |||||| ||||||    
T  848033 ttattttcataaa 848021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 2455397 - 2455298
Alignment:
Q  68 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttattt 166  Q
    ||||||||| ||||||||   ||||| ||| |||| | | |||| ||||||| ||||||||| ||||| | |||||| |||| |||||||||||||||||    
T  2455397 ttatttgagcttatctacaaacataagtttggtgaaactatttgagagaacttatgaaaacaacttattacattgtttataagttgttttcagcttattt 2455298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 98 - 203
Target Start/End: Complemental strand, 2735177 - 2735068
Alignment:
Q  98 tgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaatt---ccagatagcttgtgaaaa 193  Q
    ||||||| |||||| || |||| |||||||| |||||||| ||| |||||||  ||||||| |||||||| ||||| ||   | |||| |||| ||||||    
T  2735177 tgtgagactgtttgagataacttatgaaaacggcttatgacatttttcataagctgttttcggcttattttcataagttgttcaagattgcttatgaaaa 2735078  T
Q  194 cagcttatag 203  Q
    ||||||||||    
T  2735077 cagcttatag 2735068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 9912161 - 9912228
Alignment:
Q  106 tgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    ||||| |||||||| |||||| |||||||||| |||||||||||  |||||| ||||||||| |||||    
T  9912161 tgtttcggagaacttatgaaaccagcttatgacattgttcataagctgttttgagcttattttcataa 9912228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 13907722 - 13907618
Alignment:
Q  67 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatt 165  Q
    ||||||||||||||||||  ||||||| |||||  |||  ||||| ||||| | ||||||||||||| ||| |||||||| || || ||||||| |||||    
T  13907722 cttatttgagtttatctagtggcataagttttg--agacggtttgagagaatttatgaaaacagcttctgacattgttcacaagttattttcagtttatt 13907625  T
Q  166 tccataa 172  Q
    | |||||    
T  13907624 ttcataa 13907618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 139
Target Start/End: Original strand, 26559169 - 26559244
Alignment:
Q  66 acttatttgagtttatctaccggcataa-attttgtgagattgtttgggagaac-tatgaaaacagcttatgatat 139  Q
    ||||||||||||||| |||| |||||||   ||||||||| ||||||| ||||| |||||||||| ||||||||||    
T  26559169 acttatttgagtttacctactggcataagcatttgtgagactgtttggaagaacttatgaaaacaacttatgatat 26559244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 30641896 - 30641821
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacag 129  Q
    ||||| ||||| ||||||||||||||||||   ||||  ||||||||||||||| || |||||| |||||||||||    
T  30641896 tgtttgaattggcttatttgagtttatctatatgcatgcattttgtgagattgtgtgagagaacttatgaaaacag 30641821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 430296 - 430414
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgt 153  Q
    |||||| ||||  ||||||||  |||| ||| ||||||| |||||| | ||||||| || ||||| |  |||||||| ||||||||||||||| | ||||    
T  430296 tgtttagattggtttatttgaacttatttactggcataagttttgtaatattgtttcggcgaacttacaaaaacagcctatgatattgttcatcagttgt 430395  T
Q  154 tttcagcttatttccataa 172  Q
    ||||  ||||||| |||||    
T  430396 tttcgacttattttcataa 430414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 6538658 - 6538584
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatg 135  Q
    |||| ||||||||||||||| ||  ||||||| ||| |||||| |||| ||||||| | ||||||||||||||||    
T  6538658 attgtcttatttgagtttatgtagtggcataagtttggtgagactgttcgggagaattgatgaaaacagcttatg 6538584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 85
Target Start/End: Original strand, 7351590 - 7351620
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctac 85  Q
    |||||||||||||||||||||||||||||||    
T  7351590 tgtttaaattgacttatttgagtttatctac 7351620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 9559358 - 9559444
Alignment:
Q  72 ttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttc 157  Q
    ||||| |||||||  ||||||| |||||||||| ||||| |||||| | ||||||||||||||  | |||||||||||  |||||||    
T  9559358 ttgagattatctattggcataagttttgtgagactgtttaggagaagttatgaaaacagcttacaacattgttcataagctgttttc 9559444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 30926658 - 30926588
Alignment:
Q  67 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    |||||||||| |||| | | |||||||||||  ||||| ||||||| ||||| ||||||||||||||||||    
T  30926658 cttatttgagcttattttctggcataaatttgatgagactgtttggaagaacttatgaaaacagcttatga 30926588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 138
Target Start/End: Original strand, 21405080 - 21405157
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgata 138  Q
    ||||||||||||||| |||| ||| | ||||| |||||||||| | |||||| ||||| ||||||| || ||||||||    
T  21405080 attgacttatttgagcttatatactgacataagttttgtgagaatatttgggggaactaatgaaaataggttatgata 21405157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 31624175 - 31624089
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaattcc---agatagcttgtgaaaacagcttatag 203  Q
    |||||||||||||||||| || ||||||||  |||||||| ||||||| ||||| |||    ||||||| | ||||||||||||||||    
T  31624175 tatgaaaacagcttatgacat-gttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaacagcttatag 31624089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 201
Target Start/End: Complemental strand, 33887938 - 33887831
Alignment:
Q  97 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa--attcca-gatagcttgtgaaa 192  Q
    |||||| |||||||| ||||| | ||||||| ||||||||| || ||||| || ||||||||| |||||||||||||  ||| || |||||||| |||||    
T  33887938 ttgtgacattgtttgagagaatttatgaaaatagcttatgacat-gttcacaagttgttttcaacttatttccataagcatttcaggatagcttatgaaa 33887840  T
Q  193 acagcttat 201  Q
    |||| ||||    
T  33887839 acagtttat 33887831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 2455955 - 2455923
Alignment:
Q  61 aattgacttatttgagtttatctaccggcataa 93  Q
    |||||||||||||||| ||||||||||||||||    
T  2455955 aattgacttatttgagcttatctaccggcataa 2455923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 172
Target Start/End: Complemental strand, 6537012 - 6536980
Alignment:
Q  140 tgttcataaattgttttcagcttatttccataa 172  Q
    ||||||||| |||||||||||||||||||||||    
T  6537012 tgttcataagttgttttcagcttatttccataa 6536980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 63 - 176
Target Start/End: Complemental strand, 2142797 - 2142683
Alignment:
Q  63 ttgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagct 161  Q
    |||||||||||||||||||||||  |||||| |||| ||||| ||||||||||||| ||||||||||  || ||| | ||||||| |  |||||| ||||    
T  2142797 ttgacttatttgagtttatctacatgcataagttttatgagactgtttgggagaacttatgaaaacaagttgtgacaatgttcattagctgtttttagct 2142698  T
Q  162 tatttccataaattc 176  Q
    ||||| |||||||||    
T  2142697 tattttcataaattc 2142683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 89 - 202
Target Start/End: Original strand, 40682348 - 40682464
Alignment:
Q  89 cataaattttgtgagattgtttgggagaacta-tgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaat--tccagatagct 185  Q
    ||||| |||||||||||||||||||||||||  | |||| ||||||||| ||||||||||| ||||||||| ||||||| ||||| |  || ||||| ||    
T  40682348 cataagttttgtgagattgtttgggagaacttgttaaaatagcttatgacattgttcataagttgttttcaacttattttcataagttctcaagatatct 40682447  T
Q  186 tgtgaaaacagcttata 202  Q
    | ||||||| |||||||    
T  40682448 tatgaaaactgcttata 40682464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 67 - 203
Target Start/End: Original strand, 29628673 - 29628814
Alignment:
Q  67 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacag-cttatgatattgttcataaattgttttcagcttat 164  Q
    |||||||||| |||||||| | ||||| ||||||||||  || ||| |||||| || |||| |  ||||| | |||||||||||||||||||||||||||    
T  29628673 cttatttgagcttatctactgtcataagttttgtgagacagtctggaagaacttataaaaaaaatcttataaaattgttcataaattgttttcagcttat 29628772  T
Q  165 ttccataaatt---ccagatagcttgtgaaaacagcttatag 203  Q
    |||||||||||   | ||||||||| ||| |||| |||||||    
T  29628773 ttccataaattttccaagatagcttatgagaacaacttatag 29628814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 750809 - 750703
Alignment:
Q  67 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatt 165  Q
    ||||||||||||||||| | ||||||  |||||||||| ||||||  |||||| ||||||| |||| |||| |||||||||||  |||||| ||||||||    
T  750809 cttatttgagtttatctcctggcatatgttttgtgagagtgtttgcaagaacttatgaaaagagctaatgacattgttcataagctgttttgagcttatt 750710  T
Q  166 tccataa 172  Q
    | |||||    
T  750709 tgcataa 750703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 36534885 - 36534797
Alignment:
Q  89 cataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaattc 176  Q
    ||||| |||||||||| ||||||||| |||| ||||||||||||||| | |||||||||||  | |||||||||||||| ||| |||||    
T  36534885 cataagttttgtgagactgtttgggataacttatgaaaacagcttataaaattgttcataatctattttcagcttattttcattaattc 36534797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 62 - 145
Target Start/End: Complemental strand, 42419937 - 42419853
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttca 145  Q
    |||||||||||||||||||||| | | ||||| |||| ||||| ||||||||||||| || ||||||||||||||| ||| ||||    
T  42419937 attgacttatttgagtttatcttctgacataagttttttgagactgtttgggagaacttacgaaaacagcttatgacatttttca 42419853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 148
Target Start/End: Complemental strand, 449987 - 449904
Alignment:
Q  66 acttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataa 148  Q
    ||||||||||| ||||||||  |||||| |||| |||||||||||||||| || | |||||||||||||||| ||| |||||||    
T  449987 acttatttgagcttatctactagcataagttttatgagattgtttgggaggacttttgaaaacagcttatgacatttttcataa 449904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 172
Target Start/End: Original strand, 28677630 - 28677696
Alignment:
Q  106 tgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||||||||| ||||||||||||||||| ||| ||||||| |||||||| ||||||||||||||    
T  28677630 tgtttgggagaacttatgaaaacagcttatgacatt-ttcataagttgttttcggcttatttccataa 28677696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 27317523 - 27317449
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatg 135  Q
    ||||||||||||||| |||||||||| ||||| |||| ||||| |||||| |||||| |||||||||| ||||||    
T  27317523 attgacttatttgagcttatctaccgacataagttttatgagactgtttgagagaacttatgaaaacaacttatg 27317449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 97 - 196
Target Start/End: Complemental strand, 8017542 - 8017440
Alignment:
Q  97 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaatt---ccagatagcttgtgaaa 192  Q
    ||||| |||| |||||||||||| ||||||||||||||||||| ||||||||| |||||||| || ||||| ||||| ||   | ||||||||| |||||    
T  8017542 ttgtgcgattatttgggagaacttatgaaaacagcttatgata-tgttcataatttgttttctgcgtattttcataagttctccaagatagcttatgaaa 8017444  T
Q  193 acag 196  Q
    ||||    
T  8017443 acag 8017440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 5902476 - 5902576
Alignment:
Q  61 aattgacttatttgagtttatctaccggcataaatt-ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttca 158  Q
    |||||||||||||||  |||||||  ||||||||   |||||||| ||||||| |||||| ||||||||||||||||| || ||||||||| ||||||||    
T  5902476 aattgacttatttgaacttatcta--ggcataaacacttgtgagactgtttggaagaacttatgaaaacagcttatgacat-gttcataaactgttttca 5902572  T
Q  159 gctt 162  Q
    ||||    
T  5902573 gctt 5902576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 62 - 172
Target Start/End: Original strand, 7928224 - 7928336
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaactat-gaaaacagcttatg-atattgttcataaattgttttcag 159  Q
    |||| |||||||||| |||||||  | ||||| || ||||||| |||| |  |||||| | |||||||||||||| | ||||||||||| ||||||||||    
T  7928224 attggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttatggacattgttcataagttgttttcag 7928323  T
Q  160 cttatttccataa 172  Q
    ||||||| |||||    
T  7928324 cttattttcataa 7928336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 39073621 - 39073685
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact 119  Q
    |||||| ||||| ||||||||||| |||||||| ||||| |||||||||| ||||||| ||||||    
T  39073621 tgtttagattgatttatttgagttcatctaccgacataatttttgtgagactgtttggaagaact 39073685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 40279512 - 40279440
Alignment:
Q  100 tgagattgtttgggagaactatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    ||||| ||||||||||||||||||||||| ||| | | ||||| |||||| |||||||| ||||||| |||||    
T  40279512 tgagactgtttgggagaactatgaaaacaacttttaacattgtccataaactgttttcaacttattttcataa 40279440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 172
Target Start/End: Complemental strand, 4607069 - 4606958
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||| |||||||||| |||||||||   |||| |||||||||| | ||||||||||| | |||||||| ||||||| ||||||||| |  || ||| |||    
T  4607069 attggcttatttgagcttatctaccaatataagttttgtgagactatttgggagaacttgtgaaaacaacttatgacattgttcatgagctgcttttagc 4606970  T
Q  161 ttatttccataa 172  Q
    |||||| |||||    
T  4606969 ttattttcataa 4606958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 71 - 166
Target Start/End: Original strand, 5365514 - 5365608
Alignment:
Q  71 tttgagtttatctaccggcataaattttgtgagattgtttgggagaactatgaaaacagcttatgatattgttcataaattgttttcagcttattt 166  Q
    |||||||||||||||  |||||| ||||||  ||||||||| ||| ||| |  | ||||||| ||| ||||||||||| |||||||||||||||||    
T  5365514 tttgagtttatctactagcataagttttgtatgattgtttgagaggact-tatagacagcttttgacattgttcataagttgttttcagcttattt 5365608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 136
Target Start/End: Original strand, 23974419 - 23974494
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    ||||||||||||| |||||||||| | ||| |  || |||||||||||| ||||||| ||||||||||||||||||    
T  23974419 attgacttatttgggtttatctactgacatgagattagtgagattgttttggagaacttatgaaaacagcttatga 23974494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 30331895 - 30331820
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    |||||||||||| || |||||||| | ||||| |||||||||| ||||||||||||| |||||||| | |||||||    
T  30331895 attgacttatttcagcttatctactgacataagttttgtgagactgtttgggagaacttatgaaaaaaccttatga 30331820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 136
Target Start/End: Original strand, 42659142 - 42659212
Alignment:
Q  67 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatga 136  Q
    |||||||||| |||| ||| ||||||| |||||||||| ||||||||||||  | ||||||||||||||||    
T  42659142 cttatttgagcttatttactggcataagttttgtgagactgtttgggagaagttttgaaaacagcttatga 42659212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 16451226 - 16451157
Alignment:
Q  98 tgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttattt 166  Q
    |||||||  ||||||||||||| ||||||||| ||||||| ||||||||| |  ||||||||||||||||    
T  16451226 tgtgagaccgtttgggagaacttatgaaaacaacttatgacattgttcatgagctgttttcagcttattt 16451157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 200
Target Start/End: Original strand, 26143568 - 26143708
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||| ||| |||||| |||||||| | |||||||||||  ||| |||||||||||||| | ||||||| ||||||  |||||||| |  || ||||||||    
T  26143568 attggcttgtttgagcttatctactgacataaattttg--agactgtttgggagaacttacgaaaacaacttatgtcattgttcacaggttattttcagc 26143665  T
Q  161 ttatttccataaatt---ccagatagcttgtgaaaacagctta 200  Q
    |||||| ||||| ||   | || |||||| |||||||||||||    
T  26143666 ttattttcataagttctccaagttagcttatgaaaacagctta 26143708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 123 - 203
Target Start/End: Original strand, 29316764 - 29316846
Alignment:
Q  123 aaaacagcttatgatattgttcataaattgttttcagcttatttccataaatt---ccagatagcttgtgaaaacagcttatag 203  Q
    |||||||||||||| || |||||||| || |||||||||||||||||||| ||   | ||||||||  ||||||||||||||||    
T  29316764 aaaacagcttatgacat-gttcataagttcttttcagcttatttccataagttctccaagatagctgatgaaaacagcttatag 29316846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 196
Target Start/End: Complemental strand, 3611362 - 3611232
Alignment:
Q  70 atttgagtttatctaccggcataaattttgtgagattgtttgggagaactatgaaaa-cagcttatgatattgttcataaattgttttcagcttatttcc 168  Q
    ||||||||||| ||||   ||||| ||| || ||| |||||||||||  || ||||| || ||||||| ||| |||||||| |||||| ||||||||| |    
T  3611362 atttgagtttaactactatcataagtttcgtaagactgtttgggagatttacgaaaaacaacttatgacattattcataaactgtttttagcttattttc 3611263  T
Q  169 ataaattcc---agatagcttgtgaaaacag 196  Q
    |||| |||    |||||||||||||||||||    
T  3611262 ataagttctccaagatagcttgtgaaaacag 3611232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 172
Target Start/End: Original strand, 12313135 - 12313210
Alignment:
Q  97 ttgtgagattgtttgggagaa-ctatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||||||||||||||||  |||||||||||||||||  | ||||||||| ||| ||||| ||||||| |||||    
T  12313135 ttgtgagattgtttgggagaatttatgaaaacagcttatgcca-tgttcataagttgatttcaccttattttcataa 12313210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 145
Target Start/End: Complemental strand, 2416464 - 2416373
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttca 145  Q
    |||||| ||||||||||||||||||||||||   ||||| |||||||| | || |||| ||||| ||| |||||||||| ||  ||||||||    
T  2416464 tgtttagattgacttatttgagtttatctactaacataagttttgtgaaactgcttggaagaacttattaaaacagcttttgtcattgttca 2416373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 94
Target Start/End: Complemental strand, 6561488 - 6561449
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaa 94  Q
    ||||| ||||||||||||||||||||||||| ||||||||    
T  6561488 tgtttgaattgacttatttgagtttatctacgggcataaa 6561449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 199
Target Start/End: Complemental strand, 26626969 - 26626876
Alignment:
Q  110 tgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaatt---ccagatagcttgtgaaaacagctt 199  Q
    |||||||||| | ||||| ||||||||| |||||||||||  ||||||||| |||||| ||||| ||   | ||||||||| ||||||||||||    
T  26626969 tgggagaacttacgaaaatagcttatgacattgttcataatctgttttcaggttattttcataagttctgcaagatagcttatgaaaacagctt 26626876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 41241206 - 41241257
Alignment:
Q  214 tatacaaaaacaatctaacttcactttttctttttctatcgaaatagcttat 265  Q
    |||||||||||||| |||||||| ||| |||||| |||| ||||||||||||    
T  41241206 tatacaaaaacaatttaacttcattttatcttttcctatagaaatagcttat 41241257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 41812018 - 41812125
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaactat-gaaaacagcttatgatattgttcataaattgttttcagc 160  Q
    |||| |||||||||| |||||| | | || || ||| |||||  |||||||||||||| | ||||||||||||||| ||| |||||||  | |||||| |    
T  41812018 attggcttatttgagcttatctgcagtcaaaagtttagtgaggctgtttgggagaacttttgaaaacagcttatgacatttttcataagcttttttcaac 41812117  T
Q  161 ttatttcc 168  Q
    ||||||||    
T  41812118 ttatttcc 41812125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 10619146 - 10619220
Alignment:
Q  62 attgacttatttgagtttatctaccggcataaattttgtgagattgtttgggagaact-atgaaaacagcttatg 135  Q
    ||||||| |||||||||||||||| | || || ||||||||||    ||||||||||| ||||||||||||||||    
T  10619146 attgactcatttgagtttatctactgacacaagttttgtgagaccccttgggagaactcatgaaaacagcttatg 10619220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 173
Target Start/End: Complemental strand, 787440 - 787364
Alignment:
Q  97 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataaa 173  Q
    |||||| | |||||| ||||||| ||||||||||||||||| || || |||||  |||||||||||||| ||||||||    
T  787440 ttgtgacactgtttgtgagaacttatgaaaacagcttatgacat-gtccataagctgttttcagcttatctccataaa 787364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 1647321 - 1647269
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||||||||||||| || | ||||||  ||||||||||||||||||||||    
T  1647321 tatgaaaacagcttatgacat-gctcataagctgttttcagcttatttccataa 1647269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 3235390 - 3235461
Alignment:
Q  141 gttcataaattgttttcagcttatttccataaa---ttccagatagcttgtgaaaacagcttatagtgtata 209  Q
    ||||||||  |||||||||||||||||||||||   ||| ||||||  | ||||||||||||||||| ||||    
T  3235390 gttcataagctgttttcagcttatttccataaacttttcaagatagtatatgaaaacagcttatagtttata 3235461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 19608567 - 19608664
Alignment:
Q  70 atttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataaattgttttcagcttattt 166  Q
    |||||||||||||||| | ||||  |||| ||||| |||||| |||||| ||| || ||||||||||| ||| |||||||  | |||| |||||||||    
T  19608567 atttgagtttatctactgacataggttttatgagactgtttgcgagaacttataaacacagcttatgacattcttcataagctattttgagcttattt 19608664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 35379001 - 35379053
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    ||||||||||||| ||||  |||||||||| ||||||||||||||||| |||||    
T  35379001 tatgaaaacagctgatgac-ttgttcataagttgttttcagcttattttcataa 35379053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 40279353 - 40279300
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||||| ||||||  |||||||||||| ||||||||||| |||| |||||    
T  40279353 tatgaaaacaacttatggcattgttcataaactgttttcagctaattttcataa 40279300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 40279423 - 40279370
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||||| ||||||  |||||||||||| ||||||||||| |||| |||||    
T  40279423 tatgaaaacaacttatggcattgttcataaactgttttcagctaattttcataa 40279370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 41817253 - 41817201
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||||| ||||||| || ||| |||| |||||||||||||||||||||||    
T  41817253 tatgaaaacatcttatgacat-gttgataatttgttttcagcttatttccataa 41817201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 43065435 - 43065487
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||||| ||||||| || || |||||||||||||||||||||||| ||||    
T  43065435 tatgaaaacaacttatgacat-gtccataaattgttttcagcttatttcaataa 43065487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 136
Target Start/End: Complemental strand, 1801776 - 1801736
Alignment:
Q  97 ttgtgagattgtttgggagaac-tatgaaaacagcttatga 136  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  1801776 ttgtgatattgtttgggagaacttatgaaaacagcttatga 1801736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 172
Target Start/End: Original strand, 7035520 - 7035604
Alignment:
Q  89 cataaattttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    ||||| |||||||||| ||||| | |||||| ||| ||||||||||||| |  ||||||||  ||||||| |||||||| |||||    
T  7035520 cataagttttgtgagactgttttgaagaacttatggaaacagcttatgacacagttcataaggtgttttccgcttattttcataa 7035604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 33256825 - 33256774
Alignment:
Q  119 tatgaaaacagcttatgatattgttcataaattgttttcagcttatttccata 171  Q
    |||||||||||||||||| || ||||||||| |||| ||||||||||| ||||    
T  33256825 tatgaaaacagcttatgacat-gttcataaactgttctcagcttattttcata 33256774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 35810016 - 35809980
Alignment:
Q  57 tttaaattgacttatttgagtttatctaccggcataa 93  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  35810016 tttagattgacttatttgagcttatctaccggcataa 35809980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 97 - 172
Target Start/End: Complemental strand, 40158826 - 40158751
Alignment:
Q  97 ttgtgagattgtttgggagaact-atgaaaacagcttatgatattgttcataaattgttttcagcttatttccataa 172  Q
    |||||||| || ||||| ||||| ||||||||||||||||| | |||| |||| |||||||||||||| || |||||    
T  40158826 ttgtgagactgattgggggaacttatgaaaacagcttatgaca-tgtttataagttgttttcagcttaattacataa 40158751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 140 - 172
Target Start/End: Complemental strand, 42420062 - 42420030
Alignment:
Q  140 tgttcataaattgttttcagcttatttccataa 172  Q
    |||||||||||||||||||||| ||||||||||    
T  42420062 tgttcataaattgttttcagctcatttccataa 42420030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 44438826 - 44438873
Alignment:
Q  121 tgaaaacagcttatgatattgttcataaattgttttcagcttatttcca 169  Q
    |||||||||||||||| || ||||||||  |||||||||||||||||||    
T  44438826 tgaaaacagcttatgacat-gttcataacctgttttcagcttatttcca 44438873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 68 - 145
Target Start/End: Complemental strand, 24759 - 24681
Alignment:
Q  68 ttatttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttca 145  Q
    |||||||||  ||||||  ||||||  |||||||||| ||||||||||||| ||| |||||||||||||| ||| ||||    
T  24759 ttatttgagcgtatctattggcatatgttttgtgagactgtttgggagaacttatcaaaacagcttatgacattcttca 24681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0528 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 148
Target Start/End: Original strand, 918 - 995
Alignment:
Q  72 ttgagtttatctaccggcataaattttgtgagattgtttgggagaac-tatgaaaacagcttatgatattgttcataa 148  Q
    ||||| |||||||||||||||| |||||||| | ||||| ||| ||| ||| |||| ||||||||| ||| |||||||    
T  918 ttgagcttatctaccggcataagttttgtgatactgttttggacaacttataaaaatagcttatgacatttttcataa 995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 33832 - 33893
Alignment:
Q  55 tgtttaaattgacttatttgagtttatctaccggcataaattttgtgagattgtttgggaga 116  Q
    ||||||||||||||||||||| ||||||||| | |||||  | | ||||||||||| |||||    
T  33832 tgtttaaattgacttatttgaatttatctactgacataagctctttgagattgtttaggaga 33893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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