View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2066_high_6 (Length: 423)
Name: NF2066_high_6
Description: NF2066
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2066_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 87 - 406
Target Start/End: Original strand, 4926750 - 4927069
Alignment:
| Q |
87 |
attttaaagggatcaaaaacatatatataacccattttttaataactatgtaaaactcaaataaaattaagagtatataacggagggagtacctattaac |
186 |
Q |
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| T |
4926750 |
atttaaaagggaccaaaaacatatatataacccattttttaataaccatgtaaaactcaaataaaattaagagtatataaaggagggagtacctattaac |
4926849 |
T |
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| Q |
187 |
tcggaaaagnnnnnnntacatactttatttttgaattaagagtaatttttgaattgacacaaatattgagacacgttattttgccggtcactcgtaaaaa |
286 |
Q |
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|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4926850 |
tcggaagaaaaaaaagtacatactttatttttgaattaagagtaatttttgaattgacacaaatattgagacacgttattttgccggtcactcgtaaaaa |
4926949 |
T |
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| Q |
287 |
gagtacatactttatttaattattcatatttccttttttctgagtggatctaaaagatgtgttcaaatttttatgttcacgatgtgtgatgagctgttat |
386 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4926950 |
gagtacatactttatttaattattcatatttccttttttctgagtggatctaaaagatgtgttcaaatttttatgttcacgatgtgtgatgagctgttat |
4927049 |
T |
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| Q |
387 |
gttcgtctttgtttttcatc |
406 |
Q |
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||||||||||| |||||||| |
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| T |
4927050 |
gttcgtctttgcttttcatc |
4927069 |
T |
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