View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20674_high_22 (Length: 264)
Name: NF20674_high_22
Description: NF20674
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20674_high_22 |
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Alignment Details
Target: chr5 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 14066751 - 14067005
Alignment:
| Q |
1 |
tgttccgtagttcatgccaccaaacttggcacctgatatcagaatcaggaatttgatcttgcttatcttctgaagtgctattccctaaannnnnnnnnnn |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
14066751 |
tgttccgtagttcatgccaccaaacttggcacctgatatcagaatcaggaatttgatcttgcttatcttctgaagtgctgctccctaaaattatcatcat |
14066850 |
T |
|
| Q |
101 |
nnnnnnnncttcaacgttcaataaaatcaattgcaatttaacatcaacctctaagtcaagtttaaccttcattatttcaccaataaagcattttataatt |
200 |
Q |
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|||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14066851 |
catca---cttcaatgttcaatcaaatcaattgcaatttaacatcaacctctaagtcaagtttaaccttcattatttcaccaataaagcattttataatt |
14066947 |
T |
|
| Q |
201 |
tatgataatggatggagaaaagggtcaacttgctggttcgaaaagagtgtctgtgttc |
258 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |
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| T |
14066948 |
tatgataatggatggagaaaagggtcaacttgttggttcgaaaagagtgtgtgtgttc |
14067005 |
T |
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